HEADER CELL CYCLE 09-OCT-12 3VZ9 TITLE CRYSTAL STRUCTURE OF THE CHICKEN SPC24-SPC25 GLOBULAR DOMAIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: UNCHARACTERIZED PROTEIN; COMPND 3 CHAIN: B; COMPND 4 FRAGMENT: RWD DOMAIN, GLOBULAR DOMAIN, UNP RESIDUES 131-234; COMPND 5 SYNONYM: SPC25 PROTEIN; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: SPC24 PROTEIN; COMPND 9 CHAIN: D; COMPND 10 FRAGMENT: RWD DOMAIN, GLOBULAR DOMAIN; COMPND 11 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: GALLUS GALLUS; SOURCE 3 ORGANISM_COMMON: CHICKEN; SOURCE 4 ORGANISM_TAXID: 9031; SOURCE 5 GENE: SPC25; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: GALLUS GALLUS; SOURCE 10 ORGANISM_COMMON: CHICKEN; SOURCE 11 ORGANISM_TAXID: 9031; SOURCE 12 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 13 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS RWD DOMAIN, KINETOCHORE COMPONENT, CHROMOSOME SEGREGATION, NDC80 KEYWDS 2 COMPLEX, CELL CYCLE EXPDTA X-RAY DIFFRACTION AUTHOR T.NISHINO,T.FUKAGAWA REVDAT 2 08-NOV-23 3VZ9 1 SEQADV REVDAT 1 03-APR-13 3VZ9 0 JRNL AUTH T.NISHINO,F.RAGO,T.HORI,K.TOMII,I.M.CHEESEMAN,T.FUKAGAWA JRNL TITL CENP-T PROVIDES A STRUCTURAL PLATFORM FOR OUTER KINETOCHORE JRNL TITL 2 ASSEMBLY JRNL REF EMBO J. V. 32 424 2013 JRNL REFN ISSN 0261-4189 JRNL PMID 23334297 JRNL DOI 10.1038/EMBOJ.2012.348 REMARK 2 REMARK 2 RESOLUTION. 1.03 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.7.2_869) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.03 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 41.23 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 3 NUMBER OF REFLECTIONS : 79657 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.193 REMARK 3 R VALUE (WORKING SET) : 0.193 REMARK 3 FREE R VALUE : 0.207 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 2.510 REMARK 3 FREE R VALUE TEST SET COUNT : 2000 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 41.2625 - 2.4826 0.95 5600 147 0.1951 0.2059 REMARK 3 2 2.4826 - 1.9705 0.99 5614 138 0.1802 0.1797 REMARK 3 3 1.9705 - 1.7214 0.98 5519 146 0.1878 0.2347 REMARK 3 4 1.7214 - 1.5640 0.99 5526 143 0.1922 0.2281 REMARK 3 5 1.5640 - 1.4519 1.00 5592 144 0.1789 0.2023 REMARK 3 6 1.4519 - 1.3663 1.00 5571 141 0.1950 0.2132 REMARK 3 7 1.3663 - 1.2979 1.00 5561 146 0.1914 0.1786 REMARK 3 8 1.2979 - 1.2414 1.00 5552 143 0.1928 0.1848 REMARK 3 9 1.2414 - 1.1936 1.00 5526 138 0.1950 0.1970 REMARK 3 10 1.1936 - 1.1524 1.00 5572 146 0.1991 0.2296 REMARK 3 11 1.1524 - 1.1163 1.00 5522 144 0.2018 0.2014 REMARK 3 12 1.1163 - 1.0844 1.00 5531 142 0.2073 0.2036 REMARK 3 13 1.0844 - 1.0559 1.00 5506 139 0.2319 0.2499 REMARK 3 14 1.0559 - 1.0301 0.99 5465 143 0.2523 0.2438 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.86 REMARK 3 K_SOL : 0.36 REMARK 3 B_SOL : 37.03 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.210 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 18.320 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 9.90 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 16.28 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.01510 REMARK 3 B22 (A**2) : -0.78060 REMARK 3 B33 (A**2) : -0.23450 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 1402 REMARK 3 ANGLE : 1.092 1895 REMARK 3 CHIRALITY : 0.077 200 REMARK 3 PLANARITY : 0.006 243 REMARK 3 DIHEDRAL : 13.015 525 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 11 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN B AND (RESSEQ 131:149) REMARK 3 ORIGIN FOR THE GROUP (A): -7.5007 -18.9560 -8.0825 REMARK 3 T TENSOR REMARK 3 T11: 0.1620 T22: 0.2003 REMARK 3 T33: 0.0974 T12: -0.0411 REMARK 3 T13: 0.0080 T23: -0.0242 REMARK 3 L TENSOR REMARK 3 L11: 2.5866 L22: 3.2464 REMARK 3 L33: 5.9050 L12: -0.6313 REMARK 3 L13: -0.6397 L23: -0.8316 REMARK 3 S TENSOR REMARK 3 S11: -0.0432 S12: 0.6374 S13: 0.0018 REMARK 3 S21: -0.6641 S22: 0.1193 S23: -0.0991 REMARK 3 S31: -0.1014 S32: 0.1661 S33: -0.0319 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN B AND (RESSEQ 150:165) REMARK 3 ORIGIN FOR THE GROUP (A): -9.0420 -5.1939 3.3485 REMARK 3 T TENSOR REMARK 3 T11: 0.1068 T22: 0.0685 REMARK 3 T33: 0.1067 T12: -0.0106 REMARK 3 T13: -0.0138 T23: 0.0120 REMARK 3 L TENSOR REMARK 3 L11: 3.3883 L22: 6.4411 REMARK 3 L33: 3.4953 L12: 0.1658 REMARK 3 L13: -0.3995 L23: -0.3655 REMARK 3 S TENSOR REMARK 3 S11: 0.0055 S12: 0.1166 S13: 0.4776 REMARK 3 S21: -0.1371 S22: -0.0550 S23: 0.0689 REMARK 3 S31: -0.5302 S32: 0.0444 S33: 0.0067 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN B AND (RESSEQ 166:176) REMARK 3 ORIGIN FOR THE GROUP (A): -16.8384 -18.3827 12.8670 REMARK 3 T TENSOR REMARK 3 T11: 0.0916 T22: 0.1034 REMARK 3 T33: 0.1759 T12: -0.0179 REMARK 3 T13: 0.0658 T23: 0.0006 REMARK 3 L TENSOR REMARK 3 L11: 2.6894 L22: 2.9447 REMARK 3 L33: 1.2840 L12: 0.7867 REMARK 3 L13: -0.7854 L23: 0.5063 REMARK 3 S TENSOR REMARK 3 S11: -0.0059 S12: -0.2353 S13: -0.3587 REMARK 3 S21: 0.5110 S22: -0.1338 S23: 0.8231 REMARK 3 S31: 0.2074 S32: -0.2747 S33: 0.0317 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN B AND (RESSEQ 177:183) REMARK 3 ORIGIN FOR THE GROUP (A): -6.7384 -5.0437 9.3744 REMARK 3 T TENSOR REMARK 3 T11: 0.0827 T22: 0.0913 REMARK 3 T33: 0.0851 T12: -0.0070 REMARK 3 T13: 0.0020 T23: -0.0008 REMARK 3 L TENSOR REMARK 3 L11: 4.4044 L22: 4.6115 REMARK 3 L33: 6.4341 L12: 4.4190 REMARK 3 L13: -5.2571 L23: -5.4474 REMARK 3 S TENSOR REMARK 3 S11: 0.0098 S12: 0.1108 S13: 0.2715 REMARK 3 S21: 0.0715 S22: 0.0928 S23: 0.2179 REMARK 3 S31: -0.1228 S32: -0.0191 S33: -0.1399 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN B AND (RESSEQ 184:195) REMARK 3 ORIGIN FOR THE GROUP (A): -0.1279 0.8692 9.1491 REMARK 3 T TENSOR REMARK 3 T11: 0.0927 T22: 0.0765 REMARK 3 T33: 0.0920 T12: 0.0006 REMARK 3 T13: 0.0010 T23: 0.0174 REMARK 3 L TENSOR REMARK 3 L11: 7.1473 L22: 4.3708 REMARK 3 L33: 1.9163 L12: 3.7538 REMARK 3 L13: -2.8079 L23: -0.7324 REMARK 3 S TENSOR REMARK 3 S11: 0.1538 S12: 0.1206 S13: 0.6637 REMARK 3 S21: -0.0742 S22: 0.0518 S23: 0.2042 REMARK 3 S31: -0.1584 S32: -0.0087 S33: -0.2240 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN B AND (RESSEQ 196:213) REMARK 3 ORIGIN FOR THE GROUP (A): 2.4716 -6.3696 16.0369 REMARK 3 T TENSOR REMARK 3 T11: 0.1002 T22: 0.0872 REMARK 3 T33: 0.0543 T12: -0.0261 REMARK 3 T13: 0.0067 T23: -0.0091 REMARK 3 L TENSOR REMARK 3 L11: 4.9426 L22: 1.2579 REMARK 3 L33: 1.0476 L12: 0.1417 REMARK 3 L13: -1.2476 L23: 0.5923 REMARK 3 S TENSOR REMARK 3 S11: 0.0664 S12: -0.2307 S13: -0.0888 REMARK 3 S21: 0.1460 S22: -0.1089 S23: 0.0456 REMARK 3 S31: 0.0383 S32: -0.0151 S33: 0.0511 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN B AND (RESSEQ 214:233) REMARK 3 ORIGIN FOR THE GROUP (A): -5.8279 -14.7259 16.7315 REMARK 3 T TENSOR REMARK 3 T11: 0.0635 T22: 0.0875 REMARK 3 T33: 0.0588 T12: -0.0194 REMARK 3 T13: 0.0030 T23: 0.0126 REMARK 3 L TENSOR REMARK 3 L11: 3.7281 L22: 2.1637 REMARK 3 L33: 2.6507 L12: 1.0382 REMARK 3 L13: -1.4058 L23: -0.9354 REMARK 3 S TENSOR REMARK 3 S11: 0.0641 S12: -0.3910 S13: -0.1492 REMARK 3 S21: 0.1850 S22: -0.0684 S23: 0.1261 REMARK 3 S31: 0.0306 S32: -0.0328 S33: 0.0194 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN D AND (RESSEQ 136:145) REMARK 3 ORIGIN FOR THE GROUP (A): -0.6668 -13.9077 -0.9282 REMARK 3 T TENSOR REMARK 3 T11: 0.0838 T22: 0.1259 REMARK 3 T33: 0.0738 T12: 0.0104 REMARK 3 T13: 0.0105 T23: 0.0187 REMARK 3 L TENSOR REMARK 3 L11: 3.7923 L22: 7.7577 REMARK 3 L33: 3.1593 L12: -2.0433 REMARK 3 L13: -0.0945 L23: -0.7637 REMARK 3 S TENSOR REMARK 3 S11: 0.1560 S12: 0.4399 S13: 0.3146 REMARK 3 S21: -0.4072 S22: -0.0928 S23: -0.0072 REMARK 3 S31: -0.2877 S32: -0.2399 S33: -0.0591 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN D AND (RESSEQ 146:162) REMARK 3 ORIGIN FOR THE GROUP (A): -3.4097 -27.6203 -3.9007 REMARK 3 T TENSOR REMARK 3 T11: 0.0928 T22: 0.0801 REMARK 3 T33: 0.0771 T12: -0.0068 REMARK 3 T13: -0.0130 T23: -0.0038 REMARK 3 L TENSOR REMARK 3 L11: 7.0020 L22: 2.3539 REMARK 3 L33: 3.6526 L12: 3.8563 REMARK 3 L13: 4.7414 L23: 2.9300 REMARK 3 S TENSOR REMARK 3 S11: -0.1146 S12: 0.3309 S13: -0.1242 REMARK 3 S21: -0.2384 S22: 0.1841 S23: -0.0257 REMARK 3 S31: -0.0422 S32: 0.2371 S33: -0.0799 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN D AND (RESSEQ 163:168) REMARK 3 ORIGIN FOR THE GROUP (A): 9.6869 -25.4904 3.7468 REMARK 3 T TENSOR REMARK 3 T11: 0.1452 T22: 0.3680 REMARK 3 T33: 0.1428 T12: -0.0271 REMARK 3 T13: -0.0007 T23: 0.0300 REMARK 3 L TENSOR REMARK 3 L11: 6.5008 L22: 9.1887 REMARK 3 L33: 0.9612 L12: -3.8041 REMARK 3 L13: -2.4612 L23: 1.8805 REMARK 3 S TENSOR REMARK 3 S11: -0.1242 S12: -1.4905 S13: -0.0566 REMARK 3 S21: 1.0033 S22: 0.1738 S23: -0.5938 REMARK 3 S31: 0.1359 S32: 0.8732 S33: 0.0072 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN D AND (RESSEQ 169:195) REMARK 3 ORIGIN FOR THE GROUP (A): -5.2358 -26.8212 7.9304 REMARK 3 T TENSOR REMARK 3 T11: 0.0783 T22: 0.0676 REMARK 3 T33: 0.0780 T12: 0.0067 REMARK 3 T13: -0.0029 T23: 0.0142 REMARK 3 L TENSOR REMARK 3 L11: 0.0990 L22: 3.2654 REMARK 3 L33: 2.0356 L12: 0.4132 REMARK 3 L13: 0.0542 L23: 0.2838 REMARK 3 S TENSOR REMARK 3 S11: -0.0078 S12: 0.0830 S13: -0.0853 REMARK 3 S21: 0.0188 S22: 0.0756 S23: 0.1669 REMARK 3 S31: 0.2092 S32: -0.0520 S33: -0.0642 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3VZ9 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 16-OCT-12. REMARK 100 THE DEPOSITION ID IS D_1000095686. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 28-NOV-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SPRING-8 REMARK 200 BEAMLINE : BL44XU REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9 REMARK 200 MONOCHROMATOR : SI 111 DOUBLE CRYSTAL REMARK 200 OPTICS : MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 79657 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.030 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 200 DATA REDUNDANCY : 5.000 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.04300 REMARK 200 FOR THE DATA SET : 49.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.03 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.05 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.2 REMARK 200 DATA REDUNDANCY IN SHELL : 4.50 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.30500 REMARK 200 FOR SHELL : 5.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 2VE7 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 35.79 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.92 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.12M MONOSACCHARIDES, 0.1M MES REMARK 280 -IMIDAZOL, 30% PEG20K/P550MME, PH 6.5, VAPOR DIFFUSION, SITTING REMARK 280 DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 23.66050 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 29.23950 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 29.06850 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 29.23950 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 23.66050 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 29.06850 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3270 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 9560 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -22.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY B 129 REMARK 465 SER B 130 REMARK 465 THR B 234 REMARK 465 GLY D 123 REMARK 465 TYR D 124 REMARK 465 GLU D 125 REMARK 465 ARG D 126 REMARK 465 GLU D 127 REMARK 465 ASP D 128 REMARK 465 ASP D 129 REMARK 465 GLY D 130 REMARK 465 VAL D 131 REMARK 465 PRO D 132 REMARK 465 SER D 133 REMARK 465 ALA D 134 REMARK 465 ALA D 135 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH D 278 O HOH D 281 2.00 REMARK 500 O HOH D 279 O HOH D 280 2.05 REMARK 500 O HOH D 234 O HOH D 279 2.08 REMARK 500 O HOH B 373 O HOH B 408 2.16 REMARK 500 OE1 GLU D 152 O HOH D 285 2.19 REMARK 500 O HOH B 417 O HOH D 209 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP B 172 75.73 -153.31 REMARK 500 TYR D 163 -115.22 -96.26 REMARK 500 ASN D 172 101.81 -161.44 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3VZA RELATED DB: PDB REMARK 999 REMARK 999 SEQUENCE REMARK 999 A SEQUENCE DATABASE REFERENCE FOR CHAIN D DOES NOT CURRENTLY EXIST. DBREF 3VZ9 B 131 234 UNP E1C4Y2 E1C4Y2_CHICK 131 234 DBREF 3VZ9 D 123 195 PDB 3VZ9 3VZ9 123 195 SEQADV 3VZ9 GLY B 129 UNP E1C4Y2 EXPRESSION TAG SEQADV 3VZ9 SER B 130 UNP E1C4Y2 EXPRESSION TAG SEQRES 1 B 106 GLY SER THR LYS GLU ARG VAL GLU ARG LEU CYS LYS SER SEQRES 2 B 106 LYS GLU LEU PHE GLU GLU ARG LEU GLY LEU GLU ILE ARG SEQRES 3 B 106 ARG ILE HIS ASN GLU GLN LEU GLN PHE ILE PHE ARG HIS SEQRES 4 B 106 ILE ASP HIS LYS ASP PRO ASP LYS PRO TYR MET PHE THR SEQRES 5 B 106 LEU SER ILE ASN GLU GLN GLY ASP TYR GLU VAL THR SER SEQRES 6 B 106 CYS THR PRO PRO LEU ASP CYS ILE SER GLU PHE GLN LEU SEQRES 7 B 106 LYS VAL ARG GLU THR ASN ASN PHE SER ALA PHE ILE ALA SEQRES 8 B 106 ASN ILE ARG LYS ALA PHE THR ALA LEU SER PHE LYS GLN SEQRES 9 B 106 SER THR SEQRES 1 D 73 GLY TYR GLU ARG GLU ASP ASP GLY VAL PRO SER ALA ALA SEQRES 2 D 73 TYR VAL THR GLN LEU TYR TYR LYS ILE SER ARG ILE ASP SEQRES 3 D 73 TRP ASP TYR GLU VAL GLU PRO ALA ARG ILE LYS GLY ILE SEQRES 4 D 73 HIS TYR GLY PRO ASP ILE ALA GLN PRO ILE ASN MET ASP SEQRES 5 D 73 SER SER HIS HIS SER ARG CYS PHE ILE SER ASP TYR LEU SEQRES 6 D 73 TRP SER LEU VAL PRO THR ALA TRP FORMUL 3 HOH *251(H2 O) HELIX 1 1 THR B 131 GLY B 150 1 20 HELIX 2 2 CYS B 200 ASN B 212 1 13 HELIX 3 3 ASN B 213 SER B 233 1 21 HELIX 4 4 VAL D 137 ARG D 146 1 10 HELIX 5 5 SER D 179 LEU D 190 1 12 SHEET 1 A 4 LEU B 151 ILE B 156 0 SHEET 2 A 4 GLN B 160 PHE B 165 -1 O ILE B 164 N GLU B 152 SHEET 3 A 4 TYR B 177 ILE B 183 -1 O TYR B 177 N PHE B 165 SHEET 4 A 4 TYR B 189 THR B 195 -1 O THR B 195 N MET B 178 SHEET 1 B 3 ILE D 147 TRP D 149 0 SHEET 2 B 3 ARG D 157 HIS D 162 -1 O ILE D 161 N ASP D 148 SHEET 3 B 3 GLN D 169 ASP D 174 -1 O GLN D 169 N HIS D 162 CISPEP 1 THR B 195 PRO B 196 0 -1.57 CRYST1 47.321 58.137 58.479 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.021132 0.000000 0.000000 0.00000 SCALE2 0.000000 0.017201 0.000000 0.00000 SCALE3 0.000000 0.000000 0.017100 0.00000