data_3VZO # _entry.id 3VZO # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.381 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3VZO pdb_00003vzo 10.2210/pdb3vzo/pdb RCSB RCSB095701 ? ? WWPDB D_1000095701 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 3VZJ . unspecified PDB 3VZK . unspecified PDB 3VZL . unspecified PDB 3VZM . unspecified PDB 3VZN . unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3VZO _pdbx_database_status.recvd_initial_deposition_date 2012-10-15 _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Ludwiczek, M.L.' 1 ;D'Angelo, I. ; 2 'Yalloway, G.N.' 3 'Okon, M.' 4 'Nielsen, J.E.' 5 'Strynadka, N.C.' 6 'Withers, S.G.' 7 'McIntosh, L.P.' 8 # _citation.id primary _citation.title 'Strategies for modulating the pH-dependent activity of a family 11 glycoside hydrolase' _citation.journal_abbrev Biochemistry _citation.journal_volume 52 _citation.page_first 3138 _citation.page_last 3156 _citation.year 2013 _citation.journal_id_ASTM BICHAW _citation.country US _citation.journal_id_ISSN 0006-2960 _citation.journal_id_CSD 0033 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 23578322 _citation.pdbx_database_id_DOI 10.1021/bi400034m # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Ludwiczek, M.L.' 1 ? primary ;D'Angelo, I. ; 2 ? primary 'Yalloway, G.N.' 3 ? primary 'Brockerman, J.A.' 4 ? primary 'Okon, M.' 5 ? primary 'Nielsen, J.E.' 6 ? primary 'Strynadka, N.C.' 7 ? primary 'Withers, S.G.' 8 ? primary 'McIntosh, L.P.' 9 ? # _cell.entry_id 3VZO _cell.length_a 53.226 _cell.length_b 72.240 _cell.length_c 43.394 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3VZO _symmetry.space_group_name_H-M 'P 21 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man Endo-1,4-beta-xylanase 20433.049 1 3.2.1.8 N35H ? ? 2 branched man 'beta-D-xylopyranose-(1-4)-1,5-anhydro-2-deoxy-2-fluoro-D-xylitol' 268.237 1 ? ? ? ? 3 non-polymer syn 'SULFATE ION' 96.063 2 ? ? ? ? 4 water nat water 18.015 258 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Xylanase, 1,4-beta-D-xylan xylanohydrolase' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;ASTDYWQNWTDGGGIVNAVNGSGGNYSVNWSNTGHFVVGKGWTTGSPFRTINYNAGVWAPNGNGYLTLYGWTRSPLIEYY VVDSWGTYRPTGTYKGTVKSDGGTYDIYTTTRYNAPSIDGDRTTFTQYWSVRQSKRPTGSNATITFTNHVNAWKSHGMNL GSNWAYQVMATEGYQSSGSSNVTVW ; _entity_poly.pdbx_seq_one_letter_code_can ;ASTDYWQNWTDGGGIVNAVNGSGGNYSVNWSNTGHFVVGKGWTTGSPFRTINYNAGVWAPNGNGYLTLYGWTRSPLIEYY VVDSWGTYRPTGTYKGTVKSDGGTYDIYTTTRYNAPSIDGDRTTFTQYWSVRQSKRPTGSNATITFTNHVNAWKSHGMNL GSNWAYQVMATEGYQSSGSSNVTVW ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ALA n 1 2 SER n 1 3 THR n 1 4 ASP n 1 5 TYR n 1 6 TRP n 1 7 GLN n 1 8 ASN n 1 9 TRP n 1 10 THR n 1 11 ASP n 1 12 GLY n 1 13 GLY n 1 14 GLY n 1 15 ILE n 1 16 VAL n 1 17 ASN n 1 18 ALA n 1 19 VAL n 1 20 ASN n 1 21 GLY n 1 22 SER n 1 23 GLY n 1 24 GLY n 1 25 ASN n 1 26 TYR n 1 27 SER n 1 28 VAL n 1 29 ASN n 1 30 TRP n 1 31 SER n 1 32 ASN n 1 33 THR n 1 34 GLY n 1 35 HIS n 1 36 PHE n 1 37 VAL n 1 38 VAL n 1 39 GLY n 1 40 LYS n 1 41 GLY n 1 42 TRP n 1 43 THR n 1 44 THR n 1 45 GLY n 1 46 SER n 1 47 PRO n 1 48 PHE n 1 49 ARG n 1 50 THR n 1 51 ILE n 1 52 ASN n 1 53 TYR n 1 54 ASN n 1 55 ALA n 1 56 GLY n 1 57 VAL n 1 58 TRP n 1 59 ALA n 1 60 PRO n 1 61 ASN n 1 62 GLY n 1 63 ASN n 1 64 GLY n 1 65 TYR n 1 66 LEU n 1 67 THR n 1 68 LEU n 1 69 TYR n 1 70 GLY n 1 71 TRP n 1 72 THR n 1 73 ARG n 1 74 SER n 1 75 PRO n 1 76 LEU n 1 77 ILE n 1 78 GLU n 1 79 TYR n 1 80 TYR n 1 81 VAL n 1 82 VAL n 1 83 ASP n 1 84 SER n 1 85 TRP n 1 86 GLY n 1 87 THR n 1 88 TYR n 1 89 ARG n 1 90 PRO n 1 91 THR n 1 92 GLY n 1 93 THR n 1 94 TYR n 1 95 LYS n 1 96 GLY n 1 97 THR n 1 98 VAL n 1 99 LYS n 1 100 SER n 1 101 ASP n 1 102 GLY n 1 103 GLY n 1 104 THR n 1 105 TYR n 1 106 ASP n 1 107 ILE n 1 108 TYR n 1 109 THR n 1 110 THR n 1 111 THR n 1 112 ARG n 1 113 TYR n 1 114 ASN n 1 115 ALA n 1 116 PRO n 1 117 SER n 1 118 ILE n 1 119 ASP n 1 120 GLY n 1 121 ASP n 1 122 ARG n 1 123 THR n 1 124 THR n 1 125 PHE n 1 126 THR n 1 127 GLN n 1 128 TYR n 1 129 TRP n 1 130 SER n 1 131 VAL n 1 132 ARG n 1 133 GLN n 1 134 SER n 1 135 LYS n 1 136 ARG n 1 137 PRO n 1 138 THR n 1 139 GLY n 1 140 SER n 1 141 ASN n 1 142 ALA n 1 143 THR n 1 144 ILE n 1 145 THR n 1 146 PHE n 1 147 THR n 1 148 ASN n 1 149 HIS n 1 150 VAL n 1 151 ASN n 1 152 ALA n 1 153 TRP n 1 154 LYS n 1 155 SER n 1 156 HIS n 1 157 GLY n 1 158 MET n 1 159 ASN n 1 160 LEU n 1 161 GLY n 1 162 SER n 1 163 ASN n 1 164 TRP n 1 165 ALA n 1 166 TYR n 1 167 GLN n 1 168 VAL n 1 169 MET n 1 170 ALA n 1 171 THR n 1 172 GLU n 1 173 GLY n 1 174 TYR n 1 175 GLN n 1 176 SER n 1 177 SER n 1 178 GLY n 1 179 SER n 1 180 SER n 1 181 ASN n 1 182 VAL n 1 183 THR n 1 184 VAL n 1 185 TRP n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene xlnA _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Bacillus circulans' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 1397 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code XYNA_BACCI _struct_ref.pdbx_db_accession P09850 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;ASTDYWQNWTDGGGIVNAVNGSGGNYSVNWSNTGNFVVGKGWTTGSPFRTINYNAGVWAPNGNGYLTLYGWTRSPLIEYY VVDSWGTYRPTGTYKGTVKSDGGTYDIYTTTRYNAPSIDGDRTTFTQYWSVRQSKRPTGSNATITFTNHVNAWKSHGMNL GSNWAYQVMATEGYQSSGSSNVTVW ; _struct_ref.pdbx_align_begin 29 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3VZO _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 185 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P09850 _struct_ref_seq.db_align_beg 29 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 213 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 185 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 3VZO _struct_ref_seq_dif.mon_id HIS _struct_ref_seq_dif.pdbx_pdb_strand_id A _struct_ref_seq_dif.seq_num 35 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code P09850 _struct_ref_seq_dif.db_mon_id ASN _struct_ref_seq_dif.pdbx_seq_db_seq_num 63 _struct_ref_seq_dif.details 'engineered mutation' _struct_ref_seq_dif.pdbx_auth_seq_num 35 _struct_ref_seq_dif.pdbx_ordinal 1 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 DFX D-saccharide . 1,5-anhydro-2-deoxy-2-fluoro-D-xylitol 1,2-DEOXY-2-FLUORO-XYLOPYRANOSE 'C5 H9 F O3' 136.122 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 XYP 'D-saccharide, beta linking' . beta-D-xylopyranose 'beta-D-xylose; D-xylose; xylose' 'C5 H10 O5' 150.130 # _exptl.entry_id 3VZO _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.04 _exptl_crystal.density_percent_sol 39.75 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 298 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.pdbx_details '13-20% (NH4)2SO4, 40mM Tris-HCl, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 298K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type 'MAR scanner 345 mm plate' _diffrn_detector.pdbx_collection_date 2008-07-01 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Si(111)' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.541 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type 'RIGAKU MICROMAX-007 HF' _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.541 # _reflns.entry_id 3VZO _reflns.observed_criterion_sigma_I 1 _reflns.observed_criterion_sigma_F 1 _reflns.d_resolution_low 60 _reflns.d_resolution_high 1.7 _reflns.number_obs 23696 _reflns.number_all 25987 _reflns.percent_possible_obs 91 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _refine.entry_id 3VZO _refine.ls_number_reflns_obs 16511 _refine.ls_number_reflns_all 17761 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 43.40 _refine.ls_d_res_high 1.73 _refine.ls_percent_reflns_obs 96.75 _refine.ls_R_factor_obs 0.16673 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.16491 _refine.ls_R_factor_R_free 0.19976 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.1 _refine.ls_number_reflns_R_free 891 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.962 _refine.correlation_coeff_Fo_to_Fc_free 0.944 _refine.B_iso_mean 17.629 _refine.aniso_B[1][1] -0.35 _refine.aniso_B[2][2] 1.04 _refine.aniso_B[3][3] -0.69 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model 1BVV _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.126 _refine.pdbx_overall_ESU_R_Free 0.116 _refine.overall_SU_ML 0.069 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 2.068 _refine.overall_SU_R_Cruickshank_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1450 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 28 _refine_hist.number_atoms_solvent 258 _refine_hist.number_atoms_total 1736 _refine_hist.d_res_high 1.73 _refine_hist.d_res_low 43.40 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id r_bond_refined_d 0.012 0.021 ? 1546 ? 'X-RAY DIFFRACTION' r_bond_other_d ? ? ? ? ? 'X-RAY DIFFRACTION' r_angle_refined_deg 1.346 1.895 ? 2126 ? 'X-RAY DIFFRACTION' r_angle_other_deg ? ? ? ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_1_deg 7.638 5.000 ? 192 ? 'X-RAY DIFFRACTION' r_dihedral_angle_2_deg 35.631 23.194 ? 72 ? 'X-RAY DIFFRACTION' r_dihedral_angle_3_deg 12.058 15.000 ? 202 ? 'X-RAY DIFFRACTION' r_dihedral_angle_4_deg 14.983 15.000 ? 8 ? 'X-RAY DIFFRACTION' r_chiral_restr 0.106 0.200 ? 221 ? 'X-RAY DIFFRACTION' r_gen_planes_refined 0.005 0.020 ? 1220 ? 'X-RAY DIFFRACTION' r_gen_planes_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_nbd_refined 0.211 0.200 ? 729 ? 'X-RAY DIFFRACTION' r_nbd_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_nbtor_refined 0.309 0.200 ? 1024 ? 'X-RAY DIFFRACTION' r_nbtor_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_xyhbond_nbd_refined 0.144 0.200 ? 205 ? 'X-RAY DIFFRACTION' r_xyhbond_nbd_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_metal_ion_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_metal_ion_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_vdw_refined 0.230 0.200 ? 51 ? 'X-RAY DIFFRACTION' r_symmetry_vdw_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_hbond_refined 0.172 0.200 ? 30 ? 'X-RAY DIFFRACTION' r_symmetry_hbond_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_metal_ion_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_metal_ion_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_mcbond_it 0.618 1.500 ? 932 ? 'X-RAY DIFFRACTION' r_mcbond_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_mcangle_it 1.046 2.000 ? 1483 ? 'X-RAY DIFFRACTION' r_scbond_it 1.679 3.000 ? 755 ? 'X-RAY DIFFRACTION' r_scangle_it 2.214 4.500 ? 639 ? 'X-RAY DIFFRACTION' r_rigid_bond_restr ? ? ? ? ? 'X-RAY DIFFRACTION' r_sphericity_free ? ? ? ? ? 'X-RAY DIFFRACTION' r_sphericity_bonded ? ? ? ? ? 'X-RAY DIFFRACTION' # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.733 _refine_ls_shell.d_res_low 1.778 _refine_ls_shell.number_reflns_R_work 1121 _refine_ls_shell.R_factor_R_work 0.261 _refine_ls_shell.percent_reflns_obs 91.72 _refine_ls_shell.R_factor_R_free 0.322 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 64 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? # _struct.entry_id 3VZO _struct.title ;Crystal structure of the Bacillus circulans endo-beta-(1,4)-xylanase (BcX) N35H mutant with Glu78 covalently bonded to 2-deoxy-2-fluoro-xylobiose ; _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3VZO _struct_keywords.pdbx_keywords 'HYDROLASE/HYDROLASE INHIBITOR' _struct_keywords.text 'xylanase, GH-11 glycoside hydrolase, glycosyl-enzyme intermediate, HYDROLASE-HYDROLASE INHIBITOR complex' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? E N N 4 ? # _struct_biol.id 1 _struct_biol.details ? # _struct_conf.conf_type_id HELX_P _struct_conf.id HELX_P1 _struct_conf.pdbx_PDB_helix_id 1 _struct_conf.beg_label_comp_id PHE _struct_conf.beg_label_asym_id A _struct_conf.beg_label_seq_id 146 _struct_conf.pdbx_beg_PDB_ins_code ? _struct_conf.end_label_comp_id HIS _struct_conf.end_label_asym_id A _struct_conf.end_label_seq_id 156 _struct_conf.pdbx_end_PDB_ins_code ? _struct_conf.beg_auth_comp_id PHE _struct_conf.beg_auth_asym_id A _struct_conf.beg_auth_seq_id 146 _struct_conf.end_auth_comp_id HIS _struct_conf.end_auth_asym_id A _struct_conf.end_auth_seq_id 156 _struct_conf.pdbx_PDB_helix_class 1 _struct_conf.details ? _struct_conf.pdbx_PDB_helix_length 11 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale none ? A GLU 78 OE2 ? ? ? 1_555 B DFX . C1 ? ? A GLU 78 B DFX 1 1_555 ? ? ? ? ? ? ? 1.348 ? ? covale2 covale one ? B DFX . O4 ? ? ? 1_555 B XYP . C1 ? ? B DFX 1 B XYP 2 1_555 ? ? ? ? ? ? ? 1.430 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id SER _struct_mon_prot_cis.label_seq_id 74 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id SER _struct_mon_prot_cis.auth_seq_id 74 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 75 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 75 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle 2.55 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 8 ? B ? 5 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? parallel A 6 7 ? anti-parallel A 7 8 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 TYR A 5 ? THR A 10 ? TYR A 5 THR A 10 A 2 HIS A 35 ? TRP A 42 ? HIS A 35 TRP A 42 A 3 ASN A 163 ? TYR A 174 ? ASN A 163 TYR A 174 A 4 GLY A 64 ? ARG A 73 ? GLY A 64 ARG A 73 A 5 ILE A 77 ? TRP A 85 ? ILE A 77 TRP A 85 A 6 GLY A 120 ? ARG A 132 ? GLY A 120 ARG A 132 A 7 GLY A 103 ? SER A 117 ? GLY A 103 SER A 117 A 8 THR A 93 ? SER A 100 ? THR A 93 SER A 100 B 1 ILE A 15 ? ASN A 20 ? ILE A 15 ASN A 20 B 2 ASN A 25 ? SER A 31 ? ASN A 25 SER A 31 B 3 SER A 177 ? TRP A 185 ? SER A 177 TRP A 185 B 4 THR A 50 ? ASN A 61 ? THR A 50 ASN A 61 B 5 ALA A 142 ? THR A 145 ? ALA A 142 THR A 145 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N GLN A 7 ? N GLN A 7 O GLY A 39 ? O GLY A 39 A 2 3 N VAL A 38 ? N VAL A 38 O THR A 171 ? O THR A 171 A 3 4 O ALA A 170 ? O ALA A 170 N THR A 67 ? N THR A 67 A 4 5 N LEU A 66 ? N LEU A 66 O SER A 84 ? O SER A 84 A 5 6 N VAL A 82 ? N VAL A 82 O SER A 130 ? O SER A 130 A 6 7 O GLN A 127 ? O GLN A 127 N THR A 110 ? N THR A 110 A 7 8 O ILE A 107 ? O ILE A 107 N LYS A 95 ? N LYS A 95 B 1 2 N ASN A 17 ? N ASN A 17 O ASN A 29 ? O ASN A 29 B 2 3 N TRP A 30 ? N TRP A 30 O GLY A 178 ? O GLY A 178 B 3 4 O SER A 177 ? O SER A 177 N ASN A 61 ? N ASN A 61 B 4 5 N ILE A 51 ? N ILE A 51 O ILE A 144 ? O ILE A 144 # _database_PDB_matrix.entry_id 3VZO _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3VZO _atom_sites.fract_transf_matrix[1][1] 0.018788 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.013843 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.023045 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C F N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ALA 1 1 1 ALA ALA A . n A 1 2 SER 2 2 2 SER SER A . n A 1 3 THR 3 3 3 THR THR A . n A 1 4 ASP 4 4 4 ASP ASP A . n A 1 5 TYR 5 5 5 TYR TYR A . n A 1 6 TRP 6 6 6 TRP TRP A . n A 1 7 GLN 7 7 7 GLN GLN A . n A 1 8 ASN 8 8 8 ASN ASN A . n A 1 9 TRP 9 9 9 TRP TRP A . n A 1 10 THR 10 10 10 THR THR A . n A 1 11 ASP 11 11 11 ASP ASP A . n A 1 12 GLY 12 12 12 GLY GLY A . n A 1 13 GLY 13 13 13 GLY GLY A . n A 1 14 GLY 14 14 14 GLY GLY A . n A 1 15 ILE 15 15 15 ILE ILE A . n A 1 16 VAL 16 16 16 VAL VAL A . n A 1 17 ASN 17 17 17 ASN ASN A . n A 1 18 ALA 18 18 18 ALA ALA A . n A 1 19 VAL 19 19 19 VAL VAL A . n A 1 20 ASN 20 20 20 ASN ASN A . n A 1 21 GLY 21 21 21 GLY GLY A . n A 1 22 SER 22 22 22 SER SER A . n A 1 23 GLY 23 23 23 GLY GLY A . n A 1 24 GLY 24 24 24 GLY GLY A . n A 1 25 ASN 25 25 25 ASN ASN A . n A 1 26 TYR 26 26 26 TYR TYR A . n A 1 27 SER 27 27 27 SER SER A . n A 1 28 VAL 28 28 28 VAL VAL A . n A 1 29 ASN 29 29 29 ASN ASN A . n A 1 30 TRP 30 30 30 TRP TRP A . n A 1 31 SER 31 31 31 SER SER A . n A 1 32 ASN 32 32 32 ASN ASN A . n A 1 33 THR 33 33 33 THR THR A . n A 1 34 GLY 34 34 34 GLY GLY A . n A 1 35 HIS 35 35 35 HIS HIS A . n A 1 36 PHE 36 36 36 PHE PHE A . n A 1 37 VAL 37 37 37 VAL VAL A . n A 1 38 VAL 38 38 38 VAL VAL A . n A 1 39 GLY 39 39 39 GLY GLY A . n A 1 40 LYS 40 40 40 LYS LYS A . n A 1 41 GLY 41 41 41 GLY GLY A . n A 1 42 TRP 42 42 42 TRP TRP A . n A 1 43 THR 43 43 43 THR THR A . n A 1 44 THR 44 44 44 THR THR A . n A 1 45 GLY 45 45 45 GLY GLY A . n A 1 46 SER 46 46 46 SER SER A . n A 1 47 PRO 47 47 47 PRO PRO A . n A 1 48 PHE 48 48 48 PHE PHE A . n A 1 49 ARG 49 49 49 ARG ARG A . n A 1 50 THR 50 50 50 THR THR A . n A 1 51 ILE 51 51 51 ILE ILE A . n A 1 52 ASN 52 52 52 ASN ASN A . n A 1 53 TYR 53 53 53 TYR TYR A . n A 1 54 ASN 54 54 54 ASN ASN A . n A 1 55 ALA 55 55 55 ALA ALA A . n A 1 56 GLY 56 56 56 GLY GLY A . n A 1 57 VAL 57 57 57 VAL VAL A . n A 1 58 TRP 58 58 58 TRP TRP A . n A 1 59 ALA 59 59 59 ALA ALA A . n A 1 60 PRO 60 60 60 PRO PRO A . n A 1 61 ASN 61 61 61 ASN ASN A . n A 1 62 GLY 62 62 62 GLY GLY A . n A 1 63 ASN 63 63 63 ASN ASN A . n A 1 64 GLY 64 64 64 GLY GLY A . n A 1 65 TYR 65 65 65 TYR TYR A . n A 1 66 LEU 66 66 66 LEU LEU A . n A 1 67 THR 67 67 67 THR THR A . n A 1 68 LEU 68 68 68 LEU LEU A . n A 1 69 TYR 69 69 69 TYR TYR A . n A 1 70 GLY 70 70 70 GLY GLY A . n A 1 71 TRP 71 71 71 TRP TRP A . n A 1 72 THR 72 72 72 THR THR A . n A 1 73 ARG 73 73 73 ARG ARG A . n A 1 74 SER 74 74 74 SER SER A . n A 1 75 PRO 75 75 75 PRO PRO A . n A 1 76 LEU 76 76 76 LEU LEU A . n A 1 77 ILE 77 77 77 ILE ILE A . n A 1 78 GLU 78 78 78 GLU GLU A . n A 1 79 TYR 79 79 79 TYR TYR A . n A 1 80 TYR 80 80 80 TYR TYR A . n A 1 81 VAL 81 81 81 VAL VAL A . n A 1 82 VAL 82 82 82 VAL VAL A . n A 1 83 ASP 83 83 83 ASP ASP A . n A 1 84 SER 84 84 84 SER SER A . n A 1 85 TRP 85 85 85 TRP TRP A . n A 1 86 GLY 86 86 86 GLY GLY A . n A 1 87 THR 87 87 87 THR THR A . n A 1 88 TYR 88 88 88 TYR TYR A . n A 1 89 ARG 89 89 89 ARG ARG A . n A 1 90 PRO 90 90 90 PRO PRO A . n A 1 91 THR 91 91 91 THR THR A . n A 1 92 GLY 92 92 92 GLY GLY A . n A 1 93 THR 93 93 93 THR THR A . n A 1 94 TYR 94 94 94 TYR TYR A . n A 1 95 LYS 95 95 95 LYS LYS A . n A 1 96 GLY 96 96 96 GLY GLY A . n A 1 97 THR 97 97 97 THR THR A . n A 1 98 VAL 98 98 98 VAL VAL A . n A 1 99 LYS 99 99 99 LYS LYS A . n A 1 100 SER 100 100 100 SER SER A . n A 1 101 ASP 101 101 101 ASP ASP A . n A 1 102 GLY 102 102 102 GLY GLY A . n A 1 103 GLY 103 103 103 GLY GLY A . n A 1 104 THR 104 104 104 THR THR A . n A 1 105 TYR 105 105 105 TYR TYR A . n A 1 106 ASP 106 106 106 ASP ASP A . n A 1 107 ILE 107 107 107 ILE ILE A . n A 1 108 TYR 108 108 108 TYR TYR A . n A 1 109 THR 109 109 109 THR THR A . n A 1 110 THR 110 110 110 THR THR A . n A 1 111 THR 111 111 111 THR THR A . n A 1 112 ARG 112 112 112 ARG ARG A . n A 1 113 TYR 113 113 113 TYR TYR A . n A 1 114 ASN 114 114 114 ASN ASN A . n A 1 115 ALA 115 115 115 ALA ALA A . n A 1 116 PRO 116 116 116 PRO PRO A . n A 1 117 SER 117 117 117 SER SER A . n A 1 118 ILE 118 118 118 ILE ILE A . n A 1 119 ASP 119 119 119 ASP ASP A . n A 1 120 GLY 120 120 120 GLY GLY A . n A 1 121 ASP 121 121 121 ASP ASP A . n A 1 122 ARG 122 122 122 ARG ARG A . n A 1 123 THR 123 123 123 THR THR A . n A 1 124 THR 124 124 124 THR THR A . n A 1 125 PHE 125 125 125 PHE PHE A . n A 1 126 THR 126 126 126 THR THR A . n A 1 127 GLN 127 127 127 GLN GLN A . n A 1 128 TYR 128 128 128 TYR TYR A . n A 1 129 TRP 129 129 129 TRP TRP A . n A 1 130 SER 130 130 130 SER SER A . n A 1 131 VAL 131 131 131 VAL VAL A . n A 1 132 ARG 132 132 132 ARG ARG A . n A 1 133 GLN 133 133 133 GLN GLN A . n A 1 134 SER 134 134 134 SER SER A . n A 1 135 LYS 135 135 135 LYS LYS A . n A 1 136 ARG 136 136 136 ARG ARG A . n A 1 137 PRO 137 137 137 PRO PRO A . n A 1 138 THR 138 138 138 THR THR A . n A 1 139 GLY 139 139 139 GLY GLY A . n A 1 140 SER 140 140 140 SER SER A . n A 1 141 ASN 141 141 141 ASN ASN A . n A 1 142 ALA 142 142 142 ALA ALA A . n A 1 143 THR 143 143 143 THR THR A . n A 1 144 ILE 144 144 144 ILE ILE A . n A 1 145 THR 145 145 145 THR THR A . n A 1 146 PHE 146 146 146 PHE PHE A . n A 1 147 THR 147 147 147 THR THR A . n A 1 148 ASN 148 148 148 ASN ASN A . n A 1 149 HIS 149 149 149 HIS HIS A . n A 1 150 VAL 150 150 150 VAL VAL A . n A 1 151 ASN 151 151 151 ASN ASN A . n A 1 152 ALA 152 152 152 ALA ALA A . n A 1 153 TRP 153 153 153 TRP TRP A . n A 1 154 LYS 154 154 154 LYS LYS A . n A 1 155 SER 155 155 155 SER SER A . n A 1 156 HIS 156 156 156 HIS HIS A . n A 1 157 GLY 157 157 157 GLY GLY A . n A 1 158 MET 158 158 158 MET MET A . n A 1 159 ASN 159 159 159 ASN ASN A . n A 1 160 LEU 160 160 160 LEU LEU A . n A 1 161 GLY 161 161 161 GLY GLY A . n A 1 162 SER 162 162 162 SER SER A . n A 1 163 ASN 163 163 163 ASN ASN A . n A 1 164 TRP 164 164 164 TRP TRP A . n A 1 165 ALA 165 165 165 ALA ALA A . n A 1 166 TYR 166 166 166 TYR TYR A . n A 1 167 GLN 167 167 167 GLN GLN A . n A 1 168 VAL 168 168 168 VAL VAL A . n A 1 169 MET 169 169 169 MET MET A . n A 1 170 ALA 170 170 170 ALA ALA A . n A 1 171 THR 171 171 171 THR THR A . n A 1 172 GLU 172 172 172 GLU GLU A . n A 1 173 GLY 173 173 173 GLY GLY A . n A 1 174 TYR 174 174 174 TYR TYR A . n A 1 175 GLN 175 175 175 GLN GLN A . n A 1 176 SER 176 176 176 SER SER A . n A 1 177 SER 177 177 177 SER SER A . n A 1 178 GLY 178 178 178 GLY GLY A . n A 1 179 SER 179 179 179 SER SER A . n A 1 180 SER 180 180 180 SER SER A . n A 1 181 ASN 181 181 181 ASN ASN A . n A 1 182 VAL 182 182 182 VAL VAL A . n A 1 183 THR 183 183 183 THR THR A . n A 1 184 VAL 184 184 184 VAL VAL A . n A 1 185 TRP 185 185 185 TRP TRP A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 SO4 1 203 1 SO4 SO4 A . D 3 SO4 1 204 2 SO4 SO4 A . E 4 HOH 1 301 1 HOH HOH A . E 4 HOH 2 302 2 HOH HOH A . E 4 HOH 3 303 3 HOH HOH A . E 4 HOH 4 304 4 HOH HOH A . E 4 HOH 5 305 5 HOH HOH A . E 4 HOH 6 306 6 HOH HOH A . E 4 HOH 7 307 7 HOH HOH A . E 4 HOH 8 308 8 HOH HOH A . E 4 HOH 9 309 9 HOH HOH A . E 4 HOH 10 310 10 HOH HOH A . E 4 HOH 11 311 11 HOH HOH A . E 4 HOH 12 312 12 HOH HOH A . E 4 HOH 13 313 13 HOH HOH A . E 4 HOH 14 314 14 HOH HOH A . E 4 HOH 15 315 15 HOH HOH A . E 4 HOH 16 316 16 HOH HOH A . E 4 HOH 17 317 17 HOH HOH A . E 4 HOH 18 318 18 HOH HOH A . E 4 HOH 19 319 19 HOH HOH A . E 4 HOH 20 320 20 HOH HOH A . E 4 HOH 21 321 21 HOH HOH A . E 4 HOH 22 322 22 HOH HOH A . E 4 HOH 23 323 23 HOH HOH A . E 4 HOH 24 324 24 HOH HOH A . E 4 HOH 25 325 25 HOH HOH A . E 4 HOH 26 326 26 HOH HOH A . E 4 HOH 27 327 27 HOH HOH A . E 4 HOH 28 328 28 HOH HOH A . E 4 HOH 29 329 29 HOH HOH A . E 4 HOH 30 330 30 HOH HOH A . E 4 HOH 31 331 31 HOH HOH A . E 4 HOH 32 332 32 HOH HOH A . E 4 HOH 33 333 33 HOH HOH A . E 4 HOH 34 334 34 HOH HOH A . E 4 HOH 35 335 35 HOH HOH A . E 4 HOH 36 336 36 HOH HOH A . E 4 HOH 37 337 37 HOH HOH A . E 4 HOH 38 338 38 HOH HOH A . E 4 HOH 39 339 39 HOH HOH A . E 4 HOH 40 340 40 HOH HOH A . E 4 HOH 41 341 41 HOH HOH A . E 4 HOH 42 342 42 HOH HOH A . E 4 HOH 43 343 43 HOH HOH A . E 4 HOH 44 344 44 HOH HOH A . E 4 HOH 45 345 45 HOH HOH A . E 4 HOH 46 346 46 HOH HOH A . E 4 HOH 47 347 47 HOH HOH A . E 4 HOH 48 348 48 HOH HOH A . E 4 HOH 49 349 49 HOH HOH A . E 4 HOH 50 350 50 HOH HOH A . E 4 HOH 51 351 51 HOH HOH A . E 4 HOH 52 352 52 HOH HOH A . E 4 HOH 53 353 53 HOH HOH A . E 4 HOH 54 354 54 HOH HOH A . E 4 HOH 55 355 55 HOH HOH A . E 4 HOH 56 356 56 HOH HOH A . E 4 HOH 57 357 57 HOH HOH A . E 4 HOH 58 358 58 HOH HOH A . E 4 HOH 59 359 59 HOH HOH A . E 4 HOH 60 360 60 HOH HOH A . E 4 HOH 61 361 61 HOH HOH A . E 4 HOH 62 362 62 HOH HOH A . E 4 HOH 63 363 63 HOH HOH A . E 4 HOH 64 364 64 HOH HOH A . E 4 HOH 65 365 65 HOH HOH A . E 4 HOH 66 366 66 HOH HOH A . E 4 HOH 67 367 67 HOH HOH A . E 4 HOH 68 368 68 HOH HOH A . E 4 HOH 69 369 69 HOH HOH A . E 4 HOH 70 370 70 HOH HOH A . E 4 HOH 71 371 71 HOH HOH A . E 4 HOH 72 372 72 HOH HOH A . E 4 HOH 73 373 73 HOH HOH A . E 4 HOH 74 374 74 HOH HOH A . E 4 HOH 75 375 75 HOH HOH A . E 4 HOH 76 376 76 HOH HOH A . E 4 HOH 77 377 77 HOH HOH A . E 4 HOH 78 378 78 HOH HOH A . E 4 HOH 79 379 79 HOH HOH A . E 4 HOH 80 380 80 HOH HOH A . E 4 HOH 81 381 81 HOH HOH A . E 4 HOH 82 382 82 HOH HOH A . E 4 HOH 83 383 83 HOH HOH A . E 4 HOH 84 384 84 HOH HOH A . E 4 HOH 85 385 85 HOH HOH A . E 4 HOH 86 386 86 HOH HOH A . E 4 HOH 87 387 87 HOH HOH A . E 4 HOH 88 388 88 HOH HOH A . E 4 HOH 89 389 89 HOH HOH A . E 4 HOH 90 390 90 HOH HOH A . E 4 HOH 91 391 91 HOH HOH A . E 4 HOH 92 392 92 HOH HOH A . E 4 HOH 93 393 93 HOH HOH A . E 4 HOH 94 394 94 HOH HOH A . E 4 HOH 95 395 95 HOH HOH A . E 4 HOH 96 396 96 HOH HOH A . E 4 HOH 97 397 97 HOH HOH A . E 4 HOH 98 398 98 HOH HOH A . E 4 HOH 99 399 99 HOH HOH A . E 4 HOH 100 400 100 HOH HOH A . E 4 HOH 101 401 101 HOH HOH A . E 4 HOH 102 402 102 HOH HOH A . E 4 HOH 103 403 103 HOH HOH A . E 4 HOH 104 404 104 HOH HOH A . E 4 HOH 105 405 105 HOH HOH A . E 4 HOH 106 406 106 HOH HOH A . E 4 HOH 107 407 107 HOH HOH A . E 4 HOH 108 408 108 HOH HOH A . E 4 HOH 109 409 109 HOH HOH A . E 4 HOH 110 410 110 HOH HOH A . E 4 HOH 111 411 111 HOH HOH A . E 4 HOH 112 412 113 HOH HOH A . E 4 HOH 113 413 114 HOH HOH A . E 4 HOH 114 414 115 HOH HOH A . E 4 HOH 115 415 116 HOH HOH A . E 4 HOH 116 416 117 HOH HOH A . E 4 HOH 117 417 118 HOH HOH A . E 4 HOH 118 418 119 HOH HOH A . E 4 HOH 119 419 120 HOH HOH A . E 4 HOH 120 420 121 HOH HOH A . E 4 HOH 121 421 122 HOH HOH A . E 4 HOH 122 422 123 HOH HOH A . E 4 HOH 123 423 124 HOH HOH A . E 4 HOH 124 424 125 HOH HOH A . E 4 HOH 125 425 126 HOH HOH A . E 4 HOH 126 426 127 HOH HOH A . E 4 HOH 127 427 128 HOH HOH A . E 4 HOH 128 428 129 HOH HOH A . E 4 HOH 129 429 130 HOH HOH A . E 4 HOH 130 430 131 HOH HOH A . E 4 HOH 131 431 132 HOH HOH A . E 4 HOH 132 432 133 HOH HOH A . E 4 HOH 133 433 134 HOH HOH A . E 4 HOH 134 434 135 HOH HOH A . E 4 HOH 135 435 136 HOH HOH A . E 4 HOH 136 436 137 HOH HOH A . E 4 HOH 137 437 138 HOH HOH A . E 4 HOH 138 438 139 HOH HOH A . E 4 HOH 139 439 140 HOH HOH A . E 4 HOH 140 440 141 HOH HOH A . E 4 HOH 141 441 142 HOH HOH A . E 4 HOH 142 442 143 HOH HOH A . E 4 HOH 143 443 144 HOH HOH A . E 4 HOH 144 444 145 HOH HOH A . E 4 HOH 145 445 146 HOH HOH A . E 4 HOH 146 446 147 HOH HOH A . E 4 HOH 147 447 148 HOH HOH A . E 4 HOH 148 448 149 HOH HOH A . E 4 HOH 149 449 150 HOH HOH A . E 4 HOH 150 450 151 HOH HOH A . E 4 HOH 151 451 153 HOH HOH A . E 4 HOH 152 452 154 HOH HOH A . E 4 HOH 153 453 156 HOH HOH A . E 4 HOH 154 454 157 HOH HOH A . E 4 HOH 155 455 158 HOH HOH A . E 4 HOH 156 456 159 HOH HOH A . E 4 HOH 157 457 160 HOH HOH A . E 4 HOH 158 458 161 HOH HOH A . E 4 HOH 159 459 162 HOH HOH A . E 4 HOH 160 460 163 HOH HOH A . E 4 HOH 161 461 164 HOH HOH A . E 4 HOH 162 462 165 HOH HOH A . E 4 HOH 163 463 166 HOH HOH A . E 4 HOH 164 464 167 HOH HOH A . E 4 HOH 165 465 169 HOH HOH A . E 4 HOH 166 466 170 HOH HOH A . E 4 HOH 167 467 171 HOH HOH A . E 4 HOH 168 468 172 HOH HOH A . E 4 HOH 169 469 173 HOH HOH A . E 4 HOH 170 470 174 HOH HOH A . E 4 HOH 171 471 175 HOH HOH A . E 4 HOH 172 472 176 HOH HOH A . E 4 HOH 173 473 177 HOH HOH A . E 4 HOH 174 474 178 HOH HOH A . E 4 HOH 175 475 179 HOH HOH A . E 4 HOH 176 476 180 HOH HOH A . E 4 HOH 177 477 181 HOH HOH A . E 4 HOH 178 478 182 HOH HOH A . E 4 HOH 179 479 183 HOH HOH A . E 4 HOH 180 480 184 HOH HOH A . E 4 HOH 181 481 185 HOH HOH A . E 4 HOH 182 482 186 HOH HOH A . E 4 HOH 183 483 187 HOH HOH A . E 4 HOH 184 484 188 HOH HOH A . E 4 HOH 185 485 189 HOH HOH A . E 4 HOH 186 486 190 HOH HOH A . E 4 HOH 187 487 191 HOH HOH A . E 4 HOH 188 488 192 HOH HOH A . E 4 HOH 189 489 193 HOH HOH A . E 4 HOH 190 490 194 HOH HOH A . E 4 HOH 191 491 195 HOH HOH A . E 4 HOH 192 492 196 HOH HOH A . E 4 HOH 193 493 197 HOH HOH A . E 4 HOH 194 494 198 HOH HOH A . E 4 HOH 195 495 199 HOH HOH A . E 4 HOH 196 496 200 HOH HOH A . E 4 HOH 197 497 201 HOH HOH A . E 4 HOH 198 498 202 HOH HOH A . E 4 HOH 199 499 203 HOH HOH A . E 4 HOH 200 500 204 HOH HOH A . E 4 HOH 201 501 205 HOH HOH A . E 4 HOH 202 502 206 HOH HOH A . E 4 HOH 203 503 207 HOH HOH A . E 4 HOH 204 504 208 HOH HOH A . E 4 HOH 205 505 209 HOH HOH A . E 4 HOH 206 506 210 HOH HOH A . E 4 HOH 207 507 211 HOH HOH A . E 4 HOH 208 508 212 HOH HOH A . E 4 HOH 209 509 213 HOH HOH A . E 4 HOH 210 510 214 HOH HOH A . E 4 HOH 211 511 215 HOH HOH A . E 4 HOH 212 512 216 HOH HOH A . E 4 HOH 213 513 217 HOH HOH A . E 4 HOH 214 514 218 HOH HOH A . E 4 HOH 215 515 219 HOH HOH A . E 4 HOH 216 516 220 HOH HOH A . E 4 HOH 217 517 221 HOH HOH A . E 4 HOH 218 518 222 HOH HOH A . E 4 HOH 219 519 223 HOH HOH A . E 4 HOH 220 520 224 HOH HOH A . E 4 HOH 221 521 225 HOH HOH A . E 4 HOH 222 522 226 HOH HOH A . E 4 HOH 223 523 227 HOH HOH A . E 4 HOH 224 524 228 HOH HOH A . E 4 HOH 225 525 229 HOH HOH A . E 4 HOH 226 526 230 HOH HOH A . E 4 HOH 227 527 231 HOH HOH A . E 4 HOH 228 528 232 HOH HOH A . E 4 HOH 229 529 234 HOH HOH A . E 4 HOH 230 530 235 HOH HOH A . E 4 HOH 231 531 236 HOH HOH A . E 4 HOH 232 532 237 HOH HOH A . E 4 HOH 233 533 238 HOH HOH A . E 4 HOH 234 534 239 HOH HOH A . E 4 HOH 235 535 240 HOH HOH A . E 4 HOH 236 536 241 HOH HOH A . E 4 HOH 237 537 242 HOH HOH A . E 4 HOH 238 538 243 HOH HOH A . E 4 HOH 239 539 244 HOH HOH A . E 4 HOH 240 540 245 HOH HOH A . E 4 HOH 241 541 246 HOH HOH A . E 4 HOH 242 542 247 HOH HOH A . E 4 HOH 243 543 248 HOH HOH A . E 4 HOH 244 544 249 HOH HOH A . E 4 HOH 245 545 250 HOH HOH A . E 4 HOH 246 546 251 HOH HOH A . E 4 HOH 247 547 252 HOH HOH A . E 4 HOH 248 548 253 HOH HOH A . E 4 HOH 249 549 254 HOH HOH A . E 4 HOH 250 550 255 HOH HOH A . E 4 HOH 251 551 256 HOH HOH A . E 4 HOH 252 552 257 HOH HOH A . E 4 HOH 253 553 258 HOH HOH A . E 4 HOH 254 554 259 HOH HOH A . E 4 HOH 255 555 260 HOH HOH A . E 4 HOH 256 556 261 HOH HOH A . E 4 HOH 257 557 262 HOH HOH A . E 4 HOH 258 558 263 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id A _pdbx_struct_special_symmetry.auth_comp_id SO4 _pdbx_struct_special_symmetry.auth_seq_id 204 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id D _pdbx_struct_special_symmetry.label_comp_id SO4 _pdbx_struct_special_symmetry.label_seq_id . # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2013-05-08 2 'Structure model' 1 1 2013-07-31 3 'Structure model' 2 0 2020-07-29 4 'Structure model' 2 1 2023-11-08 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 3 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Atomic model' 3 3 'Structure model' 'Data collection' 4 3 'Structure model' 'Database references' 5 3 'Structure model' 'Derived calculations' 6 3 'Structure model' 'Structure summary' 7 4 'Structure model' 'Data collection' 8 4 'Structure model' 'Database references' 9 4 'Structure model' 'Derived calculations' 10 4 'Structure model' 'Refinement description' 11 4 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' atom_site 2 3 'Structure model' chem_comp 3 3 'Structure model' entity 4 3 'Structure model' pdbx_branch_scheme 5 3 'Structure model' pdbx_chem_comp_identifier 6 3 'Structure model' pdbx_entity_branch 7 3 'Structure model' pdbx_entity_branch_descriptor 8 3 'Structure model' pdbx_entity_branch_link 9 3 'Structure model' pdbx_entity_branch_list 10 3 'Structure model' pdbx_entity_nonpoly 11 3 'Structure model' pdbx_nonpoly_scheme 12 3 'Structure model' pdbx_struct_assembly_gen 13 3 'Structure model' pdbx_struct_special_symmetry 14 3 'Structure model' struct_asym 15 3 'Structure model' struct_conn 16 3 'Structure model' struct_ref_seq_dif 17 3 'Structure model' struct_site 18 3 'Structure model' struct_site_gen 19 4 'Structure model' chem_comp 20 4 'Structure model' chem_comp_atom 21 4 'Structure model' chem_comp_bond 22 4 'Structure model' database_2 23 4 'Structure model' pdbx_initial_refinement_model 24 4 'Structure model' struct_conn # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_atom_site.auth_asym_id' 2 3 'Structure model' '_atom_site.auth_atom_id' 3 3 'Structure model' '_atom_site.auth_seq_id' 4 3 'Structure model' '_atom_site.label_asym_id' 5 3 'Structure model' '_atom_site.label_atom_id' 6 3 'Structure model' '_atom_site.label_entity_id' 7 3 'Structure model' '_chem_comp.name' 8 3 'Structure model' '_chem_comp.type' 9 3 'Structure model' '_pdbx_struct_assembly_gen.asym_id_list' 10 3 'Structure model' '_pdbx_struct_special_symmetry.label_asym_id' 11 3 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 12 3 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 13 3 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 14 3 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 15 3 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 16 3 'Structure model' '_struct_conn.ptnr2_label_asym_id' 17 3 'Structure model' '_struct_conn.ptnr2_label_atom_id' 18 3 'Structure model' '_struct_ref_seq_dif.details' 19 4 'Structure model' '_chem_comp.pdbx_synonyms' 20 4 'Structure model' '_database_2.pdbx_DOI' 21 4 'Structure model' '_database_2.pdbx_database_accession' 22 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal MAR345dtb 'data collection' . ? 1 PHASER phasing . ? 2 REFMAC refinement 5.2.0019 ? 3 HKL-2000 'data reduction' . ? 4 SCALA 'data scaling' . ? 5 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASN A 8 ? ? -152.61 84.50 2 1 ALA A 165 ? ? -96.30 -154.73 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 DFX C1 C N N 74 DFX C2 C N S 75 DFX C3 C N S 76 DFX C4 C N R 77 DFX C5 C N N 78 DFX O3 O N N 79 DFX O4 O N N 80 DFX O5 O N N 81 DFX F2 F N N 82 DFX H1 H N N 83 DFX H12 H N N 84 DFX H2 H N N 85 DFX H3 H N N 86 DFX H4 H N N 87 DFX H51 H N N 88 DFX H52 H N N 89 DFX HO3 H N N 90 DFX HO4 H N N 91 GLN N N N N 92 GLN CA C N S 93 GLN C C N N 94 GLN O O N N 95 GLN CB C N N 96 GLN CG C N N 97 GLN CD C N N 98 GLN OE1 O N N 99 GLN NE2 N N N 100 GLN OXT O N N 101 GLN H H N N 102 GLN H2 H N N 103 GLN HA H N N 104 GLN HB2 H N N 105 GLN HB3 H N N 106 GLN HG2 H N N 107 GLN HG3 H N N 108 GLN HE21 H N N 109 GLN HE22 H N N 110 GLN HXT H N N 111 GLU N N N N 112 GLU CA C N S 113 GLU C C N N 114 GLU O O N N 115 GLU CB C N N 116 GLU CG C N N 117 GLU CD C N N 118 GLU OE1 O N N 119 GLU OE2 O N N 120 GLU OXT O N N 121 GLU H H N N 122 GLU H2 H N N 123 GLU HA H N N 124 GLU HB2 H N N 125 GLU HB3 H N N 126 GLU HG2 H N N 127 GLU HG3 H N N 128 GLU HE2 H N N 129 GLU HXT H N N 130 GLY N N N N 131 GLY CA C N N 132 GLY C C N N 133 GLY O O N N 134 GLY OXT O N N 135 GLY H H N N 136 GLY H2 H N N 137 GLY HA2 H N N 138 GLY HA3 H N N 139 GLY HXT H N N 140 HIS N N N N 141 HIS CA C N S 142 HIS C C N N 143 HIS O O N N 144 HIS CB C N N 145 HIS CG C Y N 146 HIS ND1 N Y N 147 HIS CD2 C Y N 148 HIS CE1 C Y N 149 HIS NE2 N Y N 150 HIS OXT O N N 151 HIS H H N N 152 HIS H2 H N N 153 HIS HA H N N 154 HIS HB2 H N N 155 HIS HB3 H N N 156 HIS HD1 H N N 157 HIS HD2 H N N 158 HIS HE1 H N N 159 HIS HE2 H N N 160 HIS HXT H N N 161 HOH O O N N 162 HOH H1 H N N 163 HOH H2 H N N 164 ILE N N N N 165 ILE CA C N S 166 ILE C C N N 167 ILE O O N N 168 ILE CB C N S 169 ILE CG1 C N N 170 ILE CG2 C N N 171 ILE CD1 C N N 172 ILE OXT O N N 173 ILE H H N N 174 ILE H2 H N N 175 ILE HA H N N 176 ILE HB H N N 177 ILE HG12 H N N 178 ILE HG13 H N N 179 ILE HG21 H N N 180 ILE HG22 H N N 181 ILE HG23 H N N 182 ILE HD11 H N N 183 ILE HD12 H N N 184 ILE HD13 H N N 185 ILE HXT H N N 186 LEU N N N N 187 LEU CA C N S 188 LEU C C N N 189 LEU O O N N 190 LEU CB C N N 191 LEU CG C N N 192 LEU CD1 C N N 193 LEU CD2 C N N 194 LEU OXT O N N 195 LEU H H N N 196 LEU H2 H N N 197 LEU HA H N N 198 LEU HB2 H N N 199 LEU HB3 H N N 200 LEU HG H N N 201 LEU HD11 H N N 202 LEU HD12 H N N 203 LEU HD13 H N N 204 LEU HD21 H N N 205 LEU HD22 H N N 206 LEU HD23 H N N 207 LEU HXT H N N 208 LYS N N N N 209 LYS CA C N S 210 LYS C C N N 211 LYS O O N N 212 LYS CB C N N 213 LYS CG C N N 214 LYS CD C N N 215 LYS CE C N N 216 LYS NZ N N N 217 LYS OXT O N N 218 LYS H H N N 219 LYS H2 H N N 220 LYS HA H N N 221 LYS HB2 H N N 222 LYS HB3 H N N 223 LYS HG2 H N N 224 LYS HG3 H N N 225 LYS HD2 H N N 226 LYS HD3 H N N 227 LYS HE2 H N N 228 LYS HE3 H N N 229 LYS HZ1 H N N 230 LYS HZ2 H N N 231 LYS HZ3 H N N 232 LYS HXT H N N 233 MET N N N N 234 MET CA C N S 235 MET C C N N 236 MET O O N N 237 MET CB C N N 238 MET CG C N N 239 MET SD S N N 240 MET CE C N N 241 MET OXT O N N 242 MET H H N N 243 MET H2 H N N 244 MET HA H N N 245 MET HB2 H N N 246 MET HB3 H N N 247 MET HG2 H N N 248 MET HG3 H N N 249 MET HE1 H N N 250 MET HE2 H N N 251 MET HE3 H N N 252 MET HXT H N N 253 PHE N N N N 254 PHE CA C N S 255 PHE C C N N 256 PHE O O N N 257 PHE CB C N N 258 PHE CG C Y N 259 PHE CD1 C Y N 260 PHE CD2 C Y N 261 PHE CE1 C Y N 262 PHE CE2 C Y N 263 PHE CZ C Y N 264 PHE OXT O N N 265 PHE H H N N 266 PHE H2 H N N 267 PHE HA H N N 268 PHE HB2 H N N 269 PHE HB3 H N N 270 PHE HD1 H N N 271 PHE HD2 H N N 272 PHE HE1 H N N 273 PHE HE2 H N N 274 PHE HZ H N N 275 PHE HXT H N N 276 PRO N N N N 277 PRO CA C N S 278 PRO C C N N 279 PRO O O N N 280 PRO CB C N N 281 PRO CG C N N 282 PRO CD C N N 283 PRO OXT O N N 284 PRO H H N N 285 PRO HA H N N 286 PRO HB2 H N N 287 PRO HB3 H N N 288 PRO HG2 H N N 289 PRO HG3 H N N 290 PRO HD2 H N N 291 PRO HD3 H N N 292 PRO HXT H N N 293 SER N N N N 294 SER CA C N S 295 SER C C N N 296 SER O O N N 297 SER CB C N N 298 SER OG O N N 299 SER OXT O N N 300 SER H H N N 301 SER H2 H N N 302 SER HA H N N 303 SER HB2 H N N 304 SER HB3 H N N 305 SER HG H N N 306 SER HXT H N N 307 SO4 S S N N 308 SO4 O1 O N N 309 SO4 O2 O N N 310 SO4 O3 O N N 311 SO4 O4 O N N 312 THR N N N N 313 THR CA C N S 314 THR C C N N 315 THR O O N N 316 THR CB C N R 317 THR OG1 O N N 318 THR CG2 C N N 319 THR OXT O N N 320 THR H H N N 321 THR H2 H N N 322 THR HA H N N 323 THR HB H N N 324 THR HG1 H N N 325 THR HG21 H N N 326 THR HG22 H N N 327 THR HG23 H N N 328 THR HXT H N N 329 TRP N N N N 330 TRP CA C N S 331 TRP C C N N 332 TRP O O N N 333 TRP CB C N N 334 TRP CG C Y N 335 TRP CD1 C Y N 336 TRP CD2 C Y N 337 TRP NE1 N Y N 338 TRP CE2 C Y N 339 TRP CE3 C Y N 340 TRP CZ2 C Y N 341 TRP CZ3 C Y N 342 TRP CH2 C Y N 343 TRP OXT O N N 344 TRP H H N N 345 TRP H2 H N N 346 TRP HA H N N 347 TRP HB2 H N N 348 TRP HB3 H N N 349 TRP HD1 H N N 350 TRP HE1 H N N 351 TRP HE3 H N N 352 TRP HZ2 H N N 353 TRP HZ3 H N N 354 TRP HH2 H N N 355 TRP HXT H N N 356 TYR N N N N 357 TYR CA C N S 358 TYR C C N N 359 TYR O O N N 360 TYR CB C N N 361 TYR CG C Y N 362 TYR CD1 C Y N 363 TYR CD2 C Y N 364 TYR CE1 C Y N 365 TYR CE2 C Y N 366 TYR CZ C Y N 367 TYR OH O N N 368 TYR OXT O N N 369 TYR H H N N 370 TYR H2 H N N 371 TYR HA H N N 372 TYR HB2 H N N 373 TYR HB3 H N N 374 TYR HD1 H N N 375 TYR HD2 H N N 376 TYR HE1 H N N 377 TYR HE2 H N N 378 TYR HH H N N 379 TYR HXT H N N 380 VAL N N N N 381 VAL CA C N S 382 VAL C C N N 383 VAL O O N N 384 VAL CB C N N 385 VAL CG1 C N N 386 VAL CG2 C N N 387 VAL OXT O N N 388 VAL H H N N 389 VAL H2 H N N 390 VAL HA H N N 391 VAL HB H N N 392 VAL HG11 H N N 393 VAL HG12 H N N 394 VAL HG13 H N N 395 VAL HG21 H N N 396 VAL HG22 H N N 397 VAL HG23 H N N 398 VAL HXT H N N 399 XYP O1 O N N 400 XYP C1 C N R 401 XYP C2 C N R 402 XYP C3 C N S 403 XYP C4 C N R 404 XYP C5 C N N 405 XYP O2 O N N 406 XYP O3 O N N 407 XYP O4 O N N 408 XYP O5 O N N 409 XYP HO1 H N N 410 XYP H1 H N N 411 XYP H2 H N N 412 XYP H3 H N N 413 XYP H4 H N N 414 XYP H51 H N N 415 XYP H52 H N N 416 XYP HO2 H N N 417 XYP HO3 H N N 418 XYP HO4 H N N 419 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 DFX C1 C2 sing N N 70 DFX C1 O5 sing N N 71 DFX C1 H1 sing N N 72 DFX C1 H12 sing N N 73 DFX C2 C3 sing N N 74 DFX C2 F2 sing N N 75 DFX C2 H2 sing N N 76 DFX C3 C4 sing N N 77 DFX C3 O3 sing N N 78 DFX C3 H3 sing N N 79 DFX C4 C5 sing N N 80 DFX C4 O4 sing N N 81 DFX C4 H4 sing N N 82 DFX C5 O5 sing N N 83 DFX C5 H51 sing N N 84 DFX C5 H52 sing N N 85 DFX O3 HO3 sing N N 86 DFX O4 HO4 sing N N 87 GLN N CA sing N N 88 GLN N H sing N N 89 GLN N H2 sing N N 90 GLN CA C sing N N 91 GLN CA CB sing N N 92 GLN CA HA sing N N 93 GLN C O doub N N 94 GLN C OXT sing N N 95 GLN CB CG sing N N 96 GLN CB HB2 sing N N 97 GLN CB HB3 sing N N 98 GLN CG CD sing N N 99 GLN CG HG2 sing N N 100 GLN CG HG3 sing N N 101 GLN CD OE1 doub N N 102 GLN CD NE2 sing N N 103 GLN NE2 HE21 sing N N 104 GLN NE2 HE22 sing N N 105 GLN OXT HXT sing N N 106 GLU N CA sing N N 107 GLU N H sing N N 108 GLU N H2 sing N N 109 GLU CA C sing N N 110 GLU CA CB sing N N 111 GLU CA HA sing N N 112 GLU C O doub N N 113 GLU C OXT sing N N 114 GLU CB CG sing N N 115 GLU CB HB2 sing N N 116 GLU CB HB3 sing N N 117 GLU CG CD sing N N 118 GLU CG HG2 sing N N 119 GLU CG HG3 sing N N 120 GLU CD OE1 doub N N 121 GLU CD OE2 sing N N 122 GLU OE2 HE2 sing N N 123 GLU OXT HXT sing N N 124 GLY N CA sing N N 125 GLY N H sing N N 126 GLY N H2 sing N N 127 GLY CA C sing N N 128 GLY CA HA2 sing N N 129 GLY CA HA3 sing N N 130 GLY C O doub N N 131 GLY C OXT sing N N 132 GLY OXT HXT sing N N 133 HIS N CA sing N N 134 HIS N H sing N N 135 HIS N H2 sing N N 136 HIS CA C sing N N 137 HIS CA CB sing N N 138 HIS CA HA sing N N 139 HIS C O doub N N 140 HIS C OXT sing N N 141 HIS CB CG sing N N 142 HIS CB HB2 sing N N 143 HIS CB HB3 sing N N 144 HIS CG ND1 sing Y N 145 HIS CG CD2 doub Y N 146 HIS ND1 CE1 doub Y N 147 HIS ND1 HD1 sing N N 148 HIS CD2 NE2 sing Y N 149 HIS CD2 HD2 sing N N 150 HIS CE1 NE2 sing Y N 151 HIS CE1 HE1 sing N N 152 HIS NE2 HE2 sing N N 153 HIS OXT HXT sing N N 154 HOH O H1 sing N N 155 HOH O H2 sing N N 156 ILE N CA sing N N 157 ILE N H sing N N 158 ILE N H2 sing N N 159 ILE CA C sing N N 160 ILE CA CB sing N N 161 ILE CA HA sing N N 162 ILE C O doub N N 163 ILE C OXT sing N N 164 ILE CB CG1 sing N N 165 ILE CB CG2 sing N N 166 ILE CB HB sing N N 167 ILE CG1 CD1 sing N N 168 ILE CG1 HG12 sing N N 169 ILE CG1 HG13 sing N N 170 ILE CG2 HG21 sing N N 171 ILE CG2 HG22 sing N N 172 ILE CG2 HG23 sing N N 173 ILE CD1 HD11 sing N N 174 ILE CD1 HD12 sing N N 175 ILE CD1 HD13 sing N N 176 ILE OXT HXT sing N N 177 LEU N CA sing N N 178 LEU N H sing N N 179 LEU N H2 sing N N 180 LEU CA C sing N N 181 LEU CA CB sing N N 182 LEU CA HA sing N N 183 LEU C O doub N N 184 LEU C OXT sing N N 185 LEU CB CG sing N N 186 LEU CB HB2 sing N N 187 LEU CB HB3 sing N N 188 LEU CG CD1 sing N N 189 LEU CG CD2 sing N N 190 LEU CG HG sing N N 191 LEU CD1 HD11 sing N N 192 LEU CD1 HD12 sing N N 193 LEU CD1 HD13 sing N N 194 LEU CD2 HD21 sing N N 195 LEU CD2 HD22 sing N N 196 LEU CD2 HD23 sing N N 197 LEU OXT HXT sing N N 198 LYS N CA sing N N 199 LYS N H sing N N 200 LYS N H2 sing N N 201 LYS CA C sing N N 202 LYS CA CB sing N N 203 LYS CA HA sing N N 204 LYS C O doub N N 205 LYS C OXT sing N N 206 LYS CB CG sing N N 207 LYS CB HB2 sing N N 208 LYS CB HB3 sing N N 209 LYS CG CD sing N N 210 LYS CG HG2 sing N N 211 LYS CG HG3 sing N N 212 LYS CD CE sing N N 213 LYS CD HD2 sing N N 214 LYS CD HD3 sing N N 215 LYS CE NZ sing N N 216 LYS CE HE2 sing N N 217 LYS CE HE3 sing N N 218 LYS NZ HZ1 sing N N 219 LYS NZ HZ2 sing N N 220 LYS NZ HZ3 sing N N 221 LYS OXT HXT sing N N 222 MET N CA sing N N 223 MET N H sing N N 224 MET N H2 sing N N 225 MET CA C sing N N 226 MET CA CB sing N N 227 MET CA HA sing N N 228 MET C O doub N N 229 MET C OXT sing N N 230 MET CB CG sing N N 231 MET CB HB2 sing N N 232 MET CB HB3 sing N N 233 MET CG SD sing N N 234 MET CG HG2 sing N N 235 MET CG HG3 sing N N 236 MET SD CE sing N N 237 MET CE HE1 sing N N 238 MET CE HE2 sing N N 239 MET CE HE3 sing N N 240 MET OXT HXT sing N N 241 PHE N CA sing N N 242 PHE N H sing N N 243 PHE N H2 sing N N 244 PHE CA C sing N N 245 PHE CA CB sing N N 246 PHE CA HA sing N N 247 PHE C O doub N N 248 PHE C OXT sing N N 249 PHE CB CG sing N N 250 PHE CB HB2 sing N N 251 PHE CB HB3 sing N N 252 PHE CG CD1 doub Y N 253 PHE CG CD2 sing Y N 254 PHE CD1 CE1 sing Y N 255 PHE CD1 HD1 sing N N 256 PHE CD2 CE2 doub Y N 257 PHE CD2 HD2 sing N N 258 PHE CE1 CZ doub Y N 259 PHE CE1 HE1 sing N N 260 PHE CE2 CZ sing Y N 261 PHE CE2 HE2 sing N N 262 PHE CZ HZ sing N N 263 PHE OXT HXT sing N N 264 PRO N CA sing N N 265 PRO N CD sing N N 266 PRO N H sing N N 267 PRO CA C sing N N 268 PRO CA CB sing N N 269 PRO CA HA sing N N 270 PRO C O doub N N 271 PRO C OXT sing N N 272 PRO CB CG sing N N 273 PRO CB HB2 sing N N 274 PRO CB HB3 sing N N 275 PRO CG CD sing N N 276 PRO CG HG2 sing N N 277 PRO CG HG3 sing N N 278 PRO CD HD2 sing N N 279 PRO CD HD3 sing N N 280 PRO OXT HXT sing N N 281 SER N CA sing N N 282 SER N H sing N N 283 SER N H2 sing N N 284 SER CA C sing N N 285 SER CA CB sing N N 286 SER CA HA sing N N 287 SER C O doub N N 288 SER C OXT sing N N 289 SER CB OG sing N N 290 SER CB HB2 sing N N 291 SER CB HB3 sing N N 292 SER OG HG sing N N 293 SER OXT HXT sing N N 294 SO4 S O1 doub N N 295 SO4 S O2 doub N N 296 SO4 S O3 sing N N 297 SO4 S O4 sing N N 298 THR N CA sing N N 299 THR N H sing N N 300 THR N H2 sing N N 301 THR CA C sing N N 302 THR CA CB sing N N 303 THR CA HA sing N N 304 THR C O doub N N 305 THR C OXT sing N N 306 THR CB OG1 sing N N 307 THR CB CG2 sing N N 308 THR CB HB sing N N 309 THR OG1 HG1 sing N N 310 THR CG2 HG21 sing N N 311 THR CG2 HG22 sing N N 312 THR CG2 HG23 sing N N 313 THR OXT HXT sing N N 314 TRP N CA sing N N 315 TRP N H sing N N 316 TRP N H2 sing N N 317 TRP CA C sing N N 318 TRP CA CB sing N N 319 TRP CA HA sing N N 320 TRP C O doub N N 321 TRP C OXT sing N N 322 TRP CB CG sing N N 323 TRP CB HB2 sing N N 324 TRP CB HB3 sing N N 325 TRP CG CD1 doub Y N 326 TRP CG CD2 sing Y N 327 TRP CD1 NE1 sing Y N 328 TRP CD1 HD1 sing N N 329 TRP CD2 CE2 doub Y N 330 TRP CD2 CE3 sing Y N 331 TRP NE1 CE2 sing Y N 332 TRP NE1 HE1 sing N N 333 TRP CE2 CZ2 sing Y N 334 TRP CE3 CZ3 doub Y N 335 TRP CE3 HE3 sing N N 336 TRP CZ2 CH2 doub Y N 337 TRP CZ2 HZ2 sing N N 338 TRP CZ3 CH2 sing Y N 339 TRP CZ3 HZ3 sing N N 340 TRP CH2 HH2 sing N N 341 TRP OXT HXT sing N N 342 TYR N CA sing N N 343 TYR N H sing N N 344 TYR N H2 sing N N 345 TYR CA C sing N N 346 TYR CA CB sing N N 347 TYR CA HA sing N N 348 TYR C O doub N N 349 TYR C OXT sing N N 350 TYR CB CG sing N N 351 TYR CB HB2 sing N N 352 TYR CB HB3 sing N N 353 TYR CG CD1 doub Y N 354 TYR CG CD2 sing Y N 355 TYR CD1 CE1 sing Y N 356 TYR CD1 HD1 sing N N 357 TYR CD2 CE2 doub Y N 358 TYR CD2 HD2 sing N N 359 TYR CE1 CZ doub Y N 360 TYR CE1 HE1 sing N N 361 TYR CE2 CZ sing Y N 362 TYR CE2 HE2 sing N N 363 TYR CZ OH sing N N 364 TYR OH HH sing N N 365 TYR OXT HXT sing N N 366 VAL N CA sing N N 367 VAL N H sing N N 368 VAL N H2 sing N N 369 VAL CA C sing N N 370 VAL CA CB sing N N 371 VAL CA HA sing N N 372 VAL C O doub N N 373 VAL C OXT sing N N 374 VAL CB CG1 sing N N 375 VAL CB CG2 sing N N 376 VAL CB HB sing N N 377 VAL CG1 HG11 sing N N 378 VAL CG1 HG12 sing N N 379 VAL CG1 HG13 sing N N 380 VAL CG2 HG21 sing N N 381 VAL CG2 HG22 sing N N 382 VAL CG2 HG23 sing N N 383 VAL OXT HXT sing N N 384 XYP O1 C1 sing N N 385 XYP O1 HO1 sing N N 386 XYP C1 C2 sing N N 387 XYP C1 O5 sing N N 388 XYP C1 H1 sing N N 389 XYP C2 C3 sing N N 390 XYP C2 O2 sing N N 391 XYP C2 H2 sing N N 392 XYP C3 C4 sing N N 393 XYP C3 O3 sing N N 394 XYP C3 H3 sing N N 395 XYP C4 C5 sing N N 396 XYP C4 O4 sing N N 397 XYP C4 H4 sing N N 398 XYP C5 O5 sing N N 399 XYP C5 H51 sing N N 400 XYP C5 H52 sing N N 401 XYP O2 HO2 sing N N 402 XYP O3 HO3 sing N N 403 XYP O4 HO4 sing N N 404 # loop_ _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_mon_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.hetero B 2 DFX 1 B DFX 1 X DFX 502 n B 2 XYP 2 B XYP 2 X XYS 501 n # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier DFX 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 D-1-deoxy-Xylp2fluoro XYP 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DXylpb XYP 'COMMON NAME' GMML 1.0 b-D-xylopyranose XYP 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-Xylp XYP 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Xyl # _pdbx_entity_branch.entity_id 2 _pdbx_entity_branch.type oligosaccharide # loop_ _pdbx_entity_branch_descriptor.ordinal _pdbx_entity_branch_descriptor.entity_id _pdbx_entity_branch_descriptor.descriptor _pdbx_entity_branch_descriptor.type _pdbx_entity_branch_descriptor.program _pdbx_entity_branch_descriptor.program_version 1 2 'WURCS=2.0/2,2,1/[h212h_1-5_2*F][a212h-1b_1-5]/1-2/a4-b1' WURCS PDB2Glycan 1.1.0 2 2 '[][<C5O2F1>]{[(1+1)][b-D-Xylp]{}}' LINUCS PDB-CARE ? # _pdbx_entity_branch_link.link_id 1 _pdbx_entity_branch_link.entity_id 2 _pdbx_entity_branch_link.entity_branch_list_num_1 2 _pdbx_entity_branch_link.comp_id_1 XYP _pdbx_entity_branch_link.atom_id_1 C1 _pdbx_entity_branch_link.leaving_atom_id_1 O1 _pdbx_entity_branch_link.entity_branch_list_num_2 1 _pdbx_entity_branch_link.comp_id_2 DFX _pdbx_entity_branch_link.atom_id_2 O4 _pdbx_entity_branch_link.leaving_atom_id_2 HO4 _pdbx_entity_branch_link.value_order sing _pdbx_entity_branch_link.details ? # loop_ _pdbx_entity_branch_list.entity_id _pdbx_entity_branch_list.comp_id _pdbx_entity_branch_list.num _pdbx_entity_branch_list.hetero 2 DFX 1 n 2 XYP 2 n # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 'SULFATE ION' SO4 4 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1BVV _pdbx_initial_refinement_model.details ? #