data_3W2A # _entry.id 3W2A # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.397 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3W2A pdb_00003w2a 10.2210/pdb3w2a/pdb NDB NA2139 ? ? RCSB RCSB095795 ? ? WWPDB D_1000095795 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2013-09-04 2 'Structure model' 1 1 2013-09-18 3 'Structure model' 1 2 2013-12-11 4 'Structure model' 1 3 2013-12-25 5 'Structure model' 1 4 2023-11-08 6 'Structure model' 1 5 2023-12-06 7 'Structure model' 1 6 2024-10-09 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Structure summary' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Database references' 4 5 'Structure model' 'Data collection' 5 5 'Structure model' 'Database references' 6 5 'Structure model' 'Derived calculations' 7 5 'Structure model' 'Refinement description' 8 6 'Structure model' 'Data collection' 9 7 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 5 'Structure model' chem_comp_atom 2 5 'Structure model' chem_comp_bond 3 5 'Structure model' database_2 4 5 'Structure model' pdbx_initial_refinement_model 5 5 'Structure model' struct_conn 6 5 'Structure model' struct_ref_seq_dif 7 6 'Structure model' chem_comp_atom 8 6 'Structure model' chem_comp_bond 9 7 'Structure model' pdbx_entry_details 10 7 'Structure model' pdbx_modification_feature # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 5 'Structure model' '_database_2.pdbx_DOI' 2 5 'Structure model' '_database_2.pdbx_database_accession' 3 5 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 4 5 'Structure model' '_struct_ref_seq_dif.details' 5 6 'Structure model' '_chem_comp_atom.atom_id' 6 6 'Structure model' '_chem_comp_bond.atom_id_2' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3W2A _pdbx_database_status.recvd_initial_deposition_date 2012-11-27 _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 3VWB . unspecified PDB 2ntz . unspecified PDB 1zx4 . unspecified PDB 3mkz . unspecified PDB 3W3C . unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Gao, X.P.' 1 'Waltersperger, S.' 2 'Wang, M.T.' 3 'Cui, S.' 4 # _citation.id primary _citation.title 'Structural insights into VirB-DNA complexes reveal mechanism of transcriptional activation of virulence genes' _citation.journal_abbrev 'Nucleic Acids Res.' _citation.journal_volume 41 _citation.page_first 10529 _citation.page_last 10541 _citation.year 2013 _citation.journal_id_ASTM NARHAD _citation.country UK _citation.journal_id_ISSN 0305-1048 _citation.journal_id_CSD 0389 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 23985969 _citation.pdbx_database_id_DOI 10.1093/nar/gkt748 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Gao, X.P.' 1 ? primary 'Zou, T.T.' 2 ? primary 'Mu, Z.X.' 3 ? primary 'Qin, B.' 4 ? primary 'Yang, J.' 5 ? primary 'Waltersperger, S.' 6 ? primary 'Wang, M.T.' 7 ? primary 'Cui, S.' 8 ? primary 'Jin, Q.' 9 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Virulence regulon transcriptional activator VirB' 16395.389 1 ? ? 'core domain, UNP residues 129-250' ? 2 polymer syn 'DNA (31-mer)' 9395.096 1 ? ? ? ? 3 polymer syn 'DNA (31-mer)' 9662.282 1 ? ? ? ? 4 water nat water 18.015 41 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Cell invasion regulator InvE' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no yes ;(MSE)GSSHHHHHHSSGLVPRGSH(MSE)AKEHSIRELGIGLNFLKVSG(MSE)SYKDIAKKENLSRAKVTRAFQAASVP QEIISLFPIASELNFNDYKILFNYYKGLEKANESLSSTLPILKEEIKDLDTNLPPDIYKKEILNIIKKSKNRKQN ; ;MGSSHHHHHHSSGLVPRGSHMAKEHSIRELGIGLNFLKVSGMSYKDIAKKENLSRAKVTRAFQAASVPQEIISLFPIASE LNFNDYKILFNYYKGLEKANESLSSTLPILKEEIKDLDTNLPPDIYKKEILNIIKKSKNRKQN ; A ? 2 polydeoxyribonucleotide no no ;(DT)(DT)(DT)(DA)(DA)(DT)(DA)(DT)(DA)(DC)(DT)(DT)(DC)(DA)(DT)(DT)(DT)(DC)(DA)(DT) (DA)(DC)(DT)(DG)(DA)(DA)(DA)(DT)(DC)(DC)(DC) ; TTTAATATACTTCATTTCATACTGAAATCCC B ? 3 polydeoxyribonucleotide no no ;(DA)(DA)(DA)(DG)(DG)(DG)(DA)(DT)(DT)(DT)(DC)(DA)(DG)(DT)(DA)(DT)(DG)(DA)(DA)(DA) (DT)(DG)(DA)(DA)(DG)(DT)(DA)(DT)(DA)(DT)(DT) ; AAAGGGATTTCAGTATGAAATGAAGTATATT C ? # _pdbx_entity_nonpoly.entity_id 4 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MSE n 1 2 GLY n 1 3 SER n 1 4 SER n 1 5 HIS n 1 6 HIS n 1 7 HIS n 1 8 HIS n 1 9 HIS n 1 10 HIS n 1 11 SER n 1 12 SER n 1 13 GLY n 1 14 LEU n 1 15 VAL n 1 16 PRO n 1 17 ARG n 1 18 GLY n 1 19 SER n 1 20 HIS n 1 21 MSE n 1 22 ALA n 1 23 LYS n 1 24 GLU n 1 25 HIS n 1 26 SER n 1 27 ILE n 1 28 ARG n 1 29 GLU n 1 30 LEU n 1 31 GLY n 1 32 ILE n 1 33 GLY n 1 34 LEU n 1 35 ASN n 1 36 PHE n 1 37 LEU n 1 38 LYS n 1 39 VAL n 1 40 SER n 1 41 GLY n 1 42 MSE n 1 43 SER n 1 44 TYR n 1 45 LYS n 1 46 ASP n 1 47 ILE n 1 48 ALA n 1 49 LYS n 1 50 LYS n 1 51 GLU n 1 52 ASN n 1 53 LEU n 1 54 SER n 1 55 ARG n 1 56 ALA n 1 57 LYS n 1 58 VAL n 1 59 THR n 1 60 ARG n 1 61 ALA n 1 62 PHE n 1 63 GLN n 1 64 ALA n 1 65 ALA n 1 66 SER n 1 67 VAL n 1 68 PRO n 1 69 GLN n 1 70 GLU n 1 71 ILE n 1 72 ILE n 1 73 SER n 1 74 LEU n 1 75 PHE n 1 76 PRO n 1 77 ILE n 1 78 ALA n 1 79 SER n 1 80 GLU n 1 81 LEU n 1 82 ASN n 1 83 PHE n 1 84 ASN n 1 85 ASP n 1 86 TYR n 1 87 LYS n 1 88 ILE n 1 89 LEU n 1 90 PHE n 1 91 ASN n 1 92 TYR n 1 93 TYR n 1 94 LYS n 1 95 GLY n 1 96 LEU n 1 97 GLU n 1 98 LYS n 1 99 ALA n 1 100 ASN n 1 101 GLU n 1 102 SER n 1 103 LEU n 1 104 SER n 1 105 SER n 1 106 THR n 1 107 LEU n 1 108 PRO n 1 109 ILE n 1 110 LEU n 1 111 LYS n 1 112 GLU n 1 113 GLU n 1 114 ILE n 1 115 LYS n 1 116 ASP n 1 117 LEU n 1 118 ASP n 1 119 THR n 1 120 ASN n 1 121 LEU n 1 122 PRO n 1 123 PRO n 1 124 ASP n 1 125 ILE n 1 126 TYR n 1 127 LYS n 1 128 LYS n 1 129 GLU n 1 130 ILE n 1 131 LEU n 1 132 ASN n 1 133 ILE n 1 134 ILE n 1 135 LYS n 1 136 LYS n 1 137 SER n 1 138 LYS n 1 139 ASN n 1 140 ARG n 1 141 LYS n 1 142 GLN n 1 143 ASN n 2 1 DT n 2 2 DT n 2 3 DT n 2 4 DA n 2 5 DA n 2 6 DT n 2 7 DA n 2 8 DT n 2 9 DA n 2 10 DC n 2 11 DT n 2 12 DT n 2 13 DC n 2 14 DA n 2 15 DT n 2 16 DT n 2 17 DT n 2 18 DC n 2 19 DA n 2 20 DT n 2 21 DA n 2 22 DC n 2 23 DT n 2 24 DG n 2 25 DA n 2 26 DA n 2 27 DA n 2 28 DT n 2 29 DC n 2 30 DC n 2 31 DC n 3 1 DA n 3 2 DA n 3 3 DA n 3 4 DG n 3 5 DG n 3 6 DG n 3 7 DA n 3 8 DT n 3 9 DT n 3 10 DT n 3 11 DC n 3 12 DA n 3 13 DG n 3 14 DT n 3 15 DA n 3 16 DT n 3 17 DG n 3 18 DA n 3 19 DA n 3 20 DA n 3 21 DT n 3 22 DG n 3 23 DA n 3 24 DA n 3 25 DG n 3 26 DT n 3 27 DA n 3 28 DT n 3 29 DA n 3 30 DT n 3 31 DT n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene virB _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 301 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Shigella flexneri 2a' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 42897 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'B834 (DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET-28a _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _pdbx_entity_src_syn.entity_id _pdbx_entity_src_syn.pdbx_src_id _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_entity_src_syn.organism_scientific _pdbx_entity_src_syn.organism_common_name _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.details 2 1 sample ? ? ? ? ? 'synthetic DNA' 3 1 sample ? ? ? ? ? 'synthetic DNA' # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MSE 1 108 ? ? ? A . n A 1 2 GLY 2 109 ? ? ? A . n A 1 3 SER 3 110 ? ? ? A . n A 1 4 SER 4 111 ? ? ? A . n A 1 5 HIS 5 112 ? ? ? A . n A 1 6 HIS 6 113 ? ? ? A . n A 1 7 HIS 7 114 ? ? ? A . n A 1 8 HIS 8 115 ? ? ? A . n A 1 9 HIS 9 116 ? ? ? A . n A 1 10 HIS 10 117 ? ? ? A . n A 1 11 SER 11 118 ? ? ? A . n A 1 12 SER 12 119 ? ? ? A . n A 1 13 GLY 13 120 ? ? ? A . n A 1 14 LEU 14 121 ? ? ? A . n A 1 15 VAL 15 122 ? ? ? A . n A 1 16 PRO 16 123 ? ? ? A . n A 1 17 ARG 17 124 ? ? ? A . n A 1 18 GLY 18 125 ? ? ? A . n A 1 19 SER 19 126 ? ? ? A . n A 1 20 HIS 20 127 ? ? ? A . n A 1 21 MSE 21 128 ? ? ? A . n A 1 22 ALA 22 129 ? ? ? A . n A 1 23 LYS 23 130 ? ? ? A . n A 1 24 GLU 24 131 ? ? ? A . n A 1 25 HIS 25 132 ? ? ? A . n A 1 26 SER 26 133 133 SER SER A . n A 1 27 ILE 27 134 134 ILE ILE A . n A 1 28 ARG 28 135 135 ARG ARG A . n A 1 29 GLU 29 136 136 GLU GLU A . n A 1 30 LEU 30 137 137 LEU LEU A . n A 1 31 GLY 31 138 138 GLY GLY A . n A 1 32 ILE 32 139 139 ILE ILE A . n A 1 33 GLY 33 140 140 GLY GLY A . n A 1 34 LEU 34 141 141 LEU LEU A . n A 1 35 ASN 35 142 142 ASN ASN A . n A 1 36 PHE 36 143 143 PHE PHE A . n A 1 37 LEU 37 144 144 LEU LEU A . n A 1 38 LYS 38 145 145 LYS LYS A . n A 1 39 VAL 39 146 146 VAL VAL A . n A 1 40 SER 40 147 147 SER SER A . n A 1 41 GLY 41 148 148 GLY GLY A . n A 1 42 MSE 42 149 149 MSE MSE A . n A 1 43 SER 43 150 150 SER SER A . n A 1 44 TYR 44 151 151 TYR TYR A . n A 1 45 LYS 45 152 152 LYS LYS A . n A 1 46 ASP 46 153 153 ASP ASP A . n A 1 47 ILE 47 154 154 ILE ILE A . n A 1 48 ALA 48 155 155 ALA ALA A . n A 1 49 LYS 49 156 156 LYS LYS A . n A 1 50 LYS 50 157 157 LYS LYS A . n A 1 51 GLU 51 158 158 GLU GLU A . n A 1 52 ASN 52 159 159 ASN ASN A . n A 1 53 LEU 53 160 160 LEU LEU A . n A 1 54 SER 54 161 161 SER SER A . n A 1 55 ARG 55 162 162 ARG ARG A . n A 1 56 ALA 56 163 163 ALA ALA A . n A 1 57 LYS 57 164 164 LYS LYS A . n A 1 58 VAL 58 165 165 VAL VAL A . n A 1 59 THR 59 166 166 THR THR A . n A 1 60 ARG 60 167 167 ARG ARG A . n A 1 61 ALA 61 168 168 ALA ALA A . n A 1 62 PHE 62 169 169 PHE PHE A . n A 1 63 GLN 63 170 170 GLN GLN A . n A 1 64 ALA 64 171 171 ALA ALA A . n A 1 65 ALA 65 172 172 ALA ALA A . n A 1 66 SER 66 173 173 SER SER A . n A 1 67 VAL 67 174 174 VAL VAL A . n A 1 68 PRO 68 175 175 PRO PRO A . n A 1 69 GLN 69 176 176 GLN GLN A . n A 1 70 GLU 70 177 177 GLU GLU A . n A 1 71 ILE 71 178 178 ILE ILE A . n A 1 72 ILE 72 179 179 ILE ILE A . n A 1 73 SER 73 180 180 SER SER A . n A 1 74 LEU 74 181 181 LEU LEU A . n A 1 75 PHE 75 182 182 PHE PHE A . n A 1 76 PRO 76 183 183 PRO PRO A . n A 1 77 ILE 77 184 184 ILE ILE A . n A 1 78 ALA 78 185 185 ALA ALA A . n A 1 79 SER 79 186 186 SER SER A . n A 1 80 GLU 80 187 187 GLU GLU A . n A 1 81 LEU 81 188 188 LEU LEU A . n A 1 82 ASN 82 189 189 ASN ASN A . n A 1 83 PHE 83 190 190 PHE PHE A . n A 1 84 ASN 84 191 191 ASN ASN A . n A 1 85 ASP 85 192 192 ASP ASP A . n A 1 86 TYR 86 193 193 TYR TYR A . n A 1 87 LYS 87 194 194 LYS LYS A . n A 1 88 ILE 88 195 195 ILE ILE A . n A 1 89 LEU 89 196 196 LEU LEU A . n A 1 90 PHE 90 197 197 PHE PHE A . n A 1 91 ASN 91 198 198 ASN ASN A . n A 1 92 TYR 92 199 199 TYR TYR A . n A 1 93 TYR 93 200 200 TYR TYR A . n A 1 94 LYS 94 201 201 LYS LYS A . n A 1 95 GLY 95 202 202 GLY GLY A . n A 1 96 LEU 96 203 203 LEU LEU A . n A 1 97 GLU 97 204 204 GLU GLU A . n A 1 98 LYS 98 205 205 LYS LYS A . n A 1 99 ALA 99 206 206 ALA ALA A . n A 1 100 ASN 100 207 207 ASN ASN A . n A 1 101 GLU 101 208 208 GLU GLU A . n A 1 102 SER 102 209 209 SER SER A . n A 1 103 LEU 103 210 210 LEU LEU A . n A 1 104 SER 104 211 211 SER SER A . n A 1 105 SER 105 212 212 SER SER A . n A 1 106 THR 106 213 213 THR THR A . n A 1 107 LEU 107 214 214 LEU LEU A . n A 1 108 PRO 108 215 215 PRO PRO A . n A 1 109 ILE 109 216 216 ILE ILE A . n A 1 110 LEU 110 217 217 LEU LEU A . n A 1 111 LYS 111 218 218 LYS LYS A . n A 1 112 GLU 112 219 219 GLU GLU A . n A 1 113 GLU 113 220 220 GLU GLU A . n A 1 114 ILE 114 221 221 ILE ILE A . n A 1 115 LYS 115 222 222 LYS LYS A . n A 1 116 ASP 116 223 223 ASP ASP A . n A 1 117 LEU 117 224 224 LEU LEU A . n A 1 118 ASP 118 225 225 ASP ASP A . n A 1 119 THR 119 226 226 THR THR A . n A 1 120 ASN 120 227 227 ASN ASN A . n A 1 121 LEU 121 228 228 LEU LEU A . n A 1 122 PRO 122 229 229 PRO PRO A . n A 1 123 PRO 123 230 230 PRO PRO A . n A 1 124 ASP 124 231 231 ASP ASP A . n A 1 125 ILE 125 232 232 ILE ILE A . n A 1 126 TYR 126 233 233 TYR TYR A . n A 1 127 LYS 127 234 234 LYS LYS A . n A 1 128 LYS 128 235 235 LYS LYS A . n A 1 129 GLU 129 236 236 GLU GLU A . n A 1 130 ILE 130 237 237 ILE ILE A . n A 1 131 LEU 131 238 238 LEU LEU A . n A 1 132 ASN 132 239 239 ASN ASN A . n A 1 133 ILE 133 240 240 ILE ILE A . n A 1 134 ILE 134 241 241 ILE ILE A . n A 1 135 LYS 135 242 242 LYS LYS A . n A 1 136 LYS 136 243 243 LYS LYS A . n A 1 137 SER 137 244 244 SER SER A . n A 1 138 LYS 138 245 245 LYS LYS A . n A 1 139 ASN 139 246 246 ASN ASN A . n A 1 140 ARG 140 247 ? ? ? A . n A 1 141 LYS 141 248 ? ? ? A . n A 1 142 GLN 142 249 ? ? ? A . n A 1 143 ASN 143 250 ? ? ? A . n B 2 1 DT 1 -2 ? ? ? B . n B 2 2 DT 2 -1 ? ? ? B . n B 2 3 DT 3 0 ? ? ? B . n B 2 4 DA 4 1 ? ? ? B . n B 2 5 DA 5 2 ? ? ? B . n B 2 6 DT 6 3 ? ? ? B . n B 2 7 DA 7 4 4 DA DA B . n B 2 8 DT 8 5 5 DT DT B . n B 2 9 DA 9 6 6 DA DA B . n B 2 10 DC 10 7 7 DC DC B . n B 2 11 DT 11 8 8 DT DT B . n B 2 12 DT 12 9 9 DT DT B . n B 2 13 DC 13 10 10 DC DC B . n B 2 14 DA 14 11 11 DA DA B . n B 2 15 DT 15 12 12 DT DT B . n B 2 16 DT 16 13 13 DT DT B . n B 2 17 DT 17 14 14 DT DT B . n B 2 18 DC 18 15 15 DC DC B . n B 2 19 DA 19 16 16 DA DA B . n B 2 20 DT 20 17 17 DT DT B . n B 2 21 DA 21 18 18 DA DA B . n B 2 22 DC 22 19 19 DC DC B . n B 2 23 DT 23 20 20 DT DT B . n B 2 24 DG 24 21 21 DG DG B . n B 2 25 DA 25 22 22 DA DA B . n B 2 26 DA 26 23 23 DA DA B . n B 2 27 DA 27 24 24 DA DA B . n B 2 28 DT 28 25 25 DT DT B . n B 2 29 DC 29 26 26 DC DC B . n B 2 30 DC 30 27 ? ? ? B . n B 2 31 DC 31 28 ? ? ? B . n C 3 1 DA 1 -2 ? ? ? C . n C 3 2 DA 2 -1 ? ? ? C . n C 3 3 DA 3 0 ? ? ? C . n C 3 4 DG 4 1 ? ? ? C . n C 3 5 DG 5 2 ? ? ? C . n C 3 6 DG 6 3 3 DG DG C . n C 3 7 DA 7 4 4 DA DA C . n C 3 8 DT 8 5 5 DT DT C . n C 3 9 DT 9 6 6 DT DT C . n C 3 10 DT 10 7 7 DT DT C . n C 3 11 DC 11 8 8 DC DC C . n C 3 12 DA 12 9 9 DA DA C . n C 3 13 DG 13 10 10 DG DG C . n C 3 14 DT 14 11 11 DT DT C . n C 3 15 DA 15 12 12 DA DA C . n C 3 16 DT 16 13 13 DT DT C . n C 3 17 DG 17 14 14 DG DG C . n C 3 18 DA 18 15 15 DA DA C . n C 3 19 DA 19 16 16 DA DA C . n C 3 20 DA 20 17 17 DA DA C . n C 3 21 DT 21 18 18 DT DT C . n C 3 22 DG 22 19 19 DG DG C . n C 3 23 DA 23 20 20 DA DA C . n C 3 24 DA 24 21 21 DA DA C . n C 3 25 DG 25 22 22 DG DG C . n C 3 26 DT 26 23 23 DT DT C . n C 3 27 DA 27 24 24 DA DA C . n C 3 28 DT 28 25 25 DT DT C . n C 3 29 DA 29 26 ? ? ? C . n C 3 30 DT 30 27 ? ? ? C . n C 3 31 DT 31 28 ? ? ? C . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 HOH 1 301 1 HOH HOH A . D 4 HOH 2 302 7 HOH HOH A . D 4 HOH 3 303 8 HOH HOH A . D 4 HOH 4 304 13 HOH HOH A . D 4 HOH 5 305 15 HOH HOH A . D 4 HOH 6 306 17 HOH HOH A . D 4 HOH 7 307 21 HOH HOH A . D 4 HOH 8 308 24 HOH HOH A . D 4 HOH 9 309 25 HOH HOH A . D 4 HOH 10 310 27 HOH HOH A . D 4 HOH 11 311 28 HOH HOH A . D 4 HOH 12 312 29 HOH HOH A . D 4 HOH 13 313 32 HOH HOH A . D 4 HOH 14 314 34 HOH HOH A . D 4 HOH 15 315 35 HOH HOH A . D 4 HOH 16 316 37 HOH HOH A . D 4 HOH 17 317 40 HOH HOH A . D 4 HOH 18 318 41 HOH HOH A . E 4 HOH 1 101 2 HOH HOH B . E 4 HOH 2 102 3 HOH HOH B . E 4 HOH 3 103 4 HOH HOH B . E 4 HOH 4 104 5 HOH HOH B . E 4 HOH 5 105 6 HOH HOH B . E 4 HOH 6 106 9 HOH HOH B . E 4 HOH 7 107 10 HOH HOH B . E 4 HOH 8 108 16 HOH HOH B . E 4 HOH 9 109 18 HOH HOH B . E 4 HOH 10 110 22 HOH HOH B . E 4 HOH 11 111 26 HOH HOH B . E 4 HOH 12 112 33 HOH HOH B . F 4 HOH 1 101 11 HOH HOH C . F 4 HOH 2 102 12 HOH HOH C . F 4 HOH 3 103 14 HOH HOH C . F 4 HOH 4 104 19 HOH HOH C . F 4 HOH 5 105 20 HOH HOH C . F 4 HOH 6 106 23 HOH HOH C . F 4 HOH 7 107 30 HOH HOH C . F 4 HOH 8 108 31 HOH HOH C . F 4 HOH 9 109 36 HOH HOH C . F 4 HOH 10 110 38 HOH HOH C . F 4 HOH 11 111 39 HOH HOH C . # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal RemDAq 'data collection' . ? 1 PHASER phasing MR ? 2 PHENIX refinement '(phenix.refine: 1.7.3_928)' ? 3 XDS 'data reduction' package ? 4 XDS 'data scaling' package ? 5 # _cell.entry_id 3W2A _cell.length_a 176.316 _cell.length_b 39.828 _cell.length_c 73.491 _cell.angle_alpha 90.00 _cell.angle_beta 105.79 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3W2A _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? # _exptl.entry_id 3W2A _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 3.50 _exptl_crystal.density_percent_sol 64.88 _exptl_crystal.description 'THE ENTRY CONTAINS FRIEDEL PAIRS IN F_PLUS/MINUS COLUMNS.' _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 295 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 4.5 _exptl_crystal_grow.pdbx_details '0.1M MgCl2 0.1M Sodium acetate 16% PEG-400, pH 4.5, VAPOR DIFFUSION, HANGING DROP, temperature 295K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector PIXEL _diffrn_detector.type 'PSI PILATUS 6M' _diffrn_detector.pdbx_collection_date 2012-11-03 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Bartels Monochromator Crystal Type Si (111)' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.979590 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'SLS BEAMLINE X06DA' _diffrn_source.pdbx_synchrotron_site SLS _diffrn_source.pdbx_synchrotron_beamline X06DA _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.979590 # _reflns.entry_id 3W2A _reflns.observed_criterion_sigma_I -3.0 _reflns.observed_criterion_sigma_F -3.0 _reflns.d_resolution_low 48.246 _reflns.d_resolution_high 2.775 _reflns.number_obs 23902 _reflns.number_all 23902 _reflns.percent_possible_obs 98.1 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value 0.09 _reflns.pdbx_netI_over_sigmaI 12.86 _reflns.B_iso_Wilson_estimate 65.815 _reflns.pdbx_redundancy 6.68 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.78 _reflns_shell.d_res_low 2.94 _reflns_shell.percent_possible_all 89.2 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value 0.761 _reflns_shell.meanI_over_sigI_obs 2.31 _reflns_shell.pdbx_redundancy 5.76 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 3942 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.number_possible ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.meanI_over_sigI_all ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 3W2A _refine.ls_number_reflns_obs 23806 _refine.ls_number_reflns_all 23902 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 2.00 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 48.246 _refine.ls_d_res_high 2.775 _refine.ls_percent_reflns_obs 97.84 _refine.ls_R_factor_obs 0.2426 _refine.ls_R_factor_all 0.2426 _refine.ls_R_factor_R_work 0.2415 _refine.ls_R_factor_R_free 0.2624 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.02 _refine.ls_number_reflns_R_free 1194 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 100.0706 _refine.aniso_B[1][1] 38.2239 _refine.aniso_B[2][2] -20.5652 _refine.aniso_B[3][3] -17.6587 _refine.aniso_B[1][2] -0.0000 _refine.aniso_B[1][3] -9.5862 _refine.aniso_B[2][3] -0.0000 _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_ksol 0.256 _refine.solvent_model_param_bsol 35.102 _refine.pdbx_solvent_vdw_probe_radii 1.30 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 1.11 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'THE ENTRY CONTAINS FRIEDEL PAIRS IN F_PLUS/MINUS COLUMNS.' _refine.pdbx_starting_model 3VWB _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.48 _refine.overall_FOM_work_R_set 0.7263 _refine.B_iso_max 304.230 _refine.B_iso_min 30.680 _refine.pdbx_overall_phase_error 32.7400 _refine.occupancy_max 1.000 _refine.occupancy_min 0.000 _refine.ls_redundancy_reflns_obs ? _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 912 _refine_hist.pdbx_number_atoms_nucleic_acid 943 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 41 _refine_hist.number_atoms_total 1896 _refine_hist.d_res_high 2.775 _refine_hist.d_res_low 48.246 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' f_bond_d 1991 0.004 ? ? ? 'X-RAY DIFFRACTION' f_angle_d 2882 0.924 ? ? ? 'X-RAY DIFFRACTION' f_chiral_restr 328 0.043 ? ? ? 'X-RAY DIFFRACTION' f_plane_restr 204 0.003 ? ? ? 'X-RAY DIFFRACTION' f_dihedral_angle_d 822 26.205 ? ? ? # loop_ _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.percent_reflns_obs _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_R_work _refine_ls_shell.R_factor_R_free _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.pdbx_refine_id _refine_ls_shell.redundancy_reflns_obs 2.7755 2.8866 9 85.0000 2181 . 0.4199 0.4428 . 114 . 2295 . 'X-RAY DIFFRACTION' . 2.8866 3.0179 9 100.0000 2545 . 0.3772 0.3904 . 138 . 2683 . 'X-RAY DIFFRACTION' . 3.0179 3.1770 9 99.0000 2545 . 0.3026 0.3715 . 133 . 2678 . 'X-RAY DIFFRACTION' . 3.1770 3.3760 9 98.0000 2525 . 0.2558 0.2873 . 134 . 2659 . 'X-RAY DIFFRACTION' . 3.3760 3.6366 9 100.0000 2577 . 0.2555 0.2780 . 133 . 2710 . 'X-RAY DIFFRACTION' . 3.6366 4.0024 9 100.0000 2569 . 0.2173 0.2621 . 136 . 2705 . 'X-RAY DIFFRACTION' . 4.0024 4.5812 9 100.0000 2529 . 0.1921 0.2017 . 136 . 2665 . 'X-RAY DIFFRACTION' . 4.5812 5.7703 9 100.0000 2568 . 0.2071 0.2191 . 135 . 2703 . 'X-RAY DIFFRACTION' . 5.7703 48.2536 9 100.0000 2573 . 0.2281 0.2337 . 135 . 2708 . 'X-RAY DIFFRACTION' . # _database_PDB_matrix.entry_id 3W2A _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 3W2A _struct.title 'Crystal structure of VirB core domain complexed with the cis-acting site upstream icsp promoter' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3W2A _struct_keywords.pdbx_keywords TRANSCRIPTION/DNA _struct_keywords.text ;ParS like DNA binding sites, ParB like protein, HTH DNA binding domain, ParB like, HTH DNA-binding motif, transcriptional activator, sequence specific dsDNA binding, TRANSCRIPTION-DNA complex ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 4 ? F N N 4 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP VIRB_SHIFL P0A247 1 ;AKEHSIRELGIGLNFLKVSGMSYKDIAKKENLSRAKVTRAFQAASVPQEIISLFPIASELNFNDYKILFNYYKGLEKANE SLSSTLPILKEEIKDLDTNLPPDIYKKEILNIIKKSKNRKQN ; 129 ? 2 PDB 3W2A 3W2A 2 ? ? ? 3 PDB 3W2A 3W2A 3 ? ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3W2A A 22 ? 143 ? P0A247 129 ? 250 ? 129 250 2 2 3W2A B 1 ? 31 ? 3W2A -2 ? 28 ? -2 28 3 3 3W2A C 1 ? 31 ? 3W2A -2 ? 28 ? -2 28 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3W2A MSE A 1 ? UNP P0A247 ? ? 'expression tag' 108 1 1 3W2A GLY A 2 ? UNP P0A247 ? ? 'expression tag' 109 2 1 3W2A SER A 3 ? UNP P0A247 ? ? 'expression tag' 110 3 1 3W2A SER A 4 ? UNP P0A247 ? ? 'expression tag' 111 4 1 3W2A HIS A 5 ? UNP P0A247 ? ? 'expression tag' 112 5 1 3W2A HIS A 6 ? UNP P0A247 ? ? 'expression tag' 113 6 1 3W2A HIS A 7 ? UNP P0A247 ? ? 'expression tag' 114 7 1 3W2A HIS A 8 ? UNP P0A247 ? ? 'expression tag' 115 8 1 3W2A HIS A 9 ? UNP P0A247 ? ? 'expression tag' 116 9 1 3W2A HIS A 10 ? UNP P0A247 ? ? 'expression tag' 117 10 1 3W2A SER A 11 ? UNP P0A247 ? ? 'expression tag' 118 11 1 3W2A SER A 12 ? UNP P0A247 ? ? 'expression tag' 119 12 1 3W2A GLY A 13 ? UNP P0A247 ? ? 'expression tag' 120 13 1 3W2A LEU A 14 ? UNP P0A247 ? ? 'expression tag' 121 14 1 3W2A VAL A 15 ? UNP P0A247 ? ? 'expression tag' 122 15 1 3W2A PRO A 16 ? UNP P0A247 ? ? 'expression tag' 123 16 1 3W2A ARG A 17 ? UNP P0A247 ? ? 'expression tag' 124 17 1 3W2A GLY A 18 ? UNP P0A247 ? ? 'expression tag' 125 18 1 3W2A SER A 19 ? UNP P0A247 ? ? 'expression tag' 126 19 1 3W2A HIS A 20 ? UNP P0A247 ? ? 'expression tag' 127 20 1 3W2A MSE A 21 ? UNP P0A247 ? ? 'expression tag' 128 21 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 3290 ? 1 MORE -27 ? 1 'SSA (A^2)' 14680 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 26 ? LEU A 34 ? SER A 133 LEU A 141 1 ? 9 HELX_P HELX_P2 2 SER A 43 ? ASN A 52 ? SER A 150 ASN A 159 1 ? 10 HELX_P HELX_P3 3 SER A 54 ? SER A 66 ? SER A 161 SER A 173 1 ? 13 HELX_P HELX_P4 4 PRO A 68 ? LEU A 74 ? PRO A 175 LEU A 181 1 ? 7 HELX_P HELX_P5 5 ASN A 82 ? GLU A 97 ? ASN A 189 GLU A 204 1 ? 16 HELX_P HELX_P6 6 SER A 102 ? ASP A 116 ? SER A 209 ASP A 223 1 ? 15 HELX_P HELX_P7 7 TYR A 126 ? LYS A 136 ? TYR A 233 LYS A 243 1 ? 11 HELX_P HELX_P8 8 SER A 137 ? ASN A 139 ? SER A 244 ASN A 246 5 ? 3 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A GLY 41 C ? ? ? 1_555 A MSE 42 N A ? A GLY 148 A MSE 149 1_555 ? ? ? ? ? ? ? 1.341 ? ? covale2 covale both ? A GLY 41 C ? ? ? 1_555 A MSE 42 N B ? A GLY 148 A MSE 149 1_555 ? ? ? ? ? ? ? 1.343 ? ? covale3 covale both ? A MSE 42 C A ? ? 1_555 A SER 43 N ? ? A MSE 149 A SER 150 1_555 ? ? ? ? ? ? ? 1.325 ? ? covale4 covale both ? A MSE 42 C B ? ? 1_555 A SER 43 N ? ? A MSE 149 A SER 150 1_555 ? ? ? ? ? ? ? 1.324 ? ? hydrog1 hydrog ? ? B DA 7 N1 ? ? ? 1_555 C DT 28 N3 ? ? B DA 4 C DT 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? B DA 7 N6 ? ? ? 1_555 C DT 28 O4 ? ? B DA 4 C DT 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? B DT 8 N3 ? ? ? 1_555 C DA 27 N1 ? ? B DT 5 C DA 24 1_555 ? ? ? ? ? ? 'DT-DA PAIR' ? ? ? hydrog4 hydrog ? ? B DA 9 N1 ? ? ? 1_555 C DT 26 N3 ? ? B DA 6 C DT 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? B DA 9 N6 ? ? ? 1_555 C DT 26 O4 ? ? B DA 6 C DT 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? B DC 10 N3 ? ? ? 1_555 C DG 25 N1 ? ? B DC 7 C DG 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? B DC 10 N4 ? ? ? 1_555 C DG 25 O6 ? ? B DC 7 C DG 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? B DC 10 O2 ? ? ? 1_555 C DG 25 N2 ? ? B DC 7 C DG 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? B DT 11 O4 ? ? ? 1_555 C DA 23 N6 ? ? B DT 8 C DA 20 1_555 ? ? ? ? ? ? 'DT-DA PAIR' ? ? ? hydrog10 hydrog ? ? B DT 11 N3 ? ? ? 1_555 C DA 24 N1 ? ? B DT 8 C DA 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? B DT 11 O4 ? ? ? 1_555 C DA 24 N6 ? ? B DT 8 C DA 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? B DT 12 N3 ? ? ? 1_555 C DA 23 N1 ? ? B DT 9 C DA 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? B DT 12 O4 ? ? ? 1_555 C DA 23 N6 ? ? B DT 9 C DA 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? B DC 13 N3 ? ? ? 1_555 C DG 22 N1 ? ? B DC 10 C DG 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? B DC 13 N4 ? ? ? 1_555 C DG 22 O6 ? ? B DC 10 C DG 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? B DC 13 O2 ? ? ? 1_555 C DG 22 N2 ? ? B DC 10 C DG 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? B DA 14 N1 ? ? ? 1_555 C DT 21 N3 ? ? B DA 11 C DT 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? B DA 14 N6 ? ? ? 1_555 C DT 21 O4 ? ? B DA 11 C DT 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? B DT 15 N3 ? ? ? 1_555 C DA 20 N1 ? ? B DT 12 C DA 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? B DT 15 O4 ? ? ? 1_555 C DA 20 N6 ? ? B DT 12 C DA 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? B DT 16 N3 ? ? ? 1_555 C DA 19 N1 ? ? B DT 13 C DA 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? B DT 16 O4 ? ? ? 1_555 C DA 19 N6 ? ? B DT 13 C DA 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? B DT 17 N3 ? ? ? 1_555 C DA 18 N1 ? ? B DT 14 C DA 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? B DT 17 O4 ? ? ? 1_555 C DA 18 N6 ? ? B DT 14 C DA 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? B DC 18 N3 ? ? ? 1_555 C DG 17 N1 ? ? B DC 15 C DG 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? B DC 18 N4 ? ? ? 1_555 C DG 17 O6 ? ? B DC 15 C DG 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? B DC 18 O2 ? ? ? 1_555 C DG 17 N2 ? ? B DC 15 C DG 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? B DA 19 N1 ? ? ? 1_555 C DT 16 N3 ? ? B DA 16 C DT 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? B DA 19 N6 ? ? ? 1_555 C DT 16 O4 ? ? B DA 16 C DT 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? B DT 20 N3 ? ? ? 1_555 C DA 15 N1 ? ? B DT 17 C DA 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? B DT 20 O4 ? ? ? 1_555 C DA 15 N6 ? ? B DT 17 C DA 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? B DA 21 N1 ? ? ? 1_555 C DT 14 N3 ? ? B DA 18 C DT 11 1_555 ? ? ? ? ? ? 'DA-DT PAIR' ? ? ? hydrog33 hydrog ? ? B DC 22 N3 ? ? ? 1_555 C DG 13 N1 ? ? B DC 19 C DG 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? B DC 22 N4 ? ? ? 1_555 C DG 13 O6 ? ? B DC 19 C DG 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? B DC 22 O2 ? ? ? 1_555 C DG 13 N2 ? ? B DC 19 C DG 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? B DT 23 N3 ? ? ? 1_555 C DA 12 N1 ? ? B DT 20 C DA 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? B DT 23 O4 ? ? ? 1_555 C DA 12 N6 ? ? B DT 20 C DA 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? B DG 24 N1 ? ? ? 1_555 C DC 11 N3 ? ? B DG 21 C DC 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? B DG 24 N2 ? ? ? 1_555 C DC 11 O2 ? ? B DG 21 C DC 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? B DG 24 O6 ? ? ? 1_555 C DC 11 N4 ? ? B DG 21 C DC 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? B DA 25 N6 ? ? ? 1_555 C DT 9 O4 ? ? B DA 22 C DT 6 1_555 ? ? ? ? ? ? 'DA-DT PAIR' ? ? ? hydrog42 hydrog ? ? B DA 25 N1 ? ? ? 1_555 C DT 10 N3 ? ? B DA 22 C DT 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog43 hydrog ? ? B DA 25 N6 ? ? ? 1_555 C DT 10 O4 ? ? B DA 22 C DT 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog44 hydrog ? ? B DA 26 N6 ? ? ? 1_555 C DT 8 O4 ? ? B DA 23 C DT 5 1_555 ? ? ? ? ? ? 'DA-DT PAIR' ? ? ? hydrog45 hydrog ? ? B DA 26 N1 ? ? ? 1_555 C DT 9 N3 ? ? B DA 23 C DT 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog46 hydrog ? ? B DA 26 N6 ? ? ? 1_555 C DT 9 O4 ? ? B DA 23 C DT 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog47 hydrog ? ? B DA 27 N1 ? ? ? 1_555 C DT 8 N3 ? ? B DA 24 C DT 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog48 hydrog ? ? B DA 27 N6 ? ? ? 1_555 C DT 8 O4 ? ? B DA 24 C DT 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog49 hydrog ? ? B DT 28 N3 ? ? ? 1_555 C DA 7 N1 ? ? B DT 25 C DA 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog50 hydrog ? ? B DT 28 O4 ? ? ? 1_555 C DA 7 N6 ? ? B DT 25 C DA 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog51 hydrog ? ? B DC 29 N3 ? ? ? 1_555 C DG 6 N1 ? ? B DC 26 C DG 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog52 hydrog ? ? B DC 29 N4 ? ? ? 1_555 C DG 6 O6 ? ? B DC 26 C DG 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog53 hydrog ? ? B DC 29 O2 ? ? ? 1_555 C DG 6 N2 ? ? B DC 26 C DG 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? hydrog ? ? # loop_ _pdbx_modification_feature.ordinal _pdbx_modification_feature.label_comp_id _pdbx_modification_feature.label_asym_id _pdbx_modification_feature.label_seq_id _pdbx_modification_feature.label_alt_id _pdbx_modification_feature.modified_residue_label_comp_id _pdbx_modification_feature.modified_residue_label_asym_id _pdbx_modification_feature.modified_residue_label_seq_id _pdbx_modification_feature.modified_residue_label_alt_id _pdbx_modification_feature.auth_comp_id _pdbx_modification_feature.auth_asym_id _pdbx_modification_feature.auth_seq_id _pdbx_modification_feature.PDB_ins_code _pdbx_modification_feature.symmetry _pdbx_modification_feature.modified_residue_auth_comp_id _pdbx_modification_feature.modified_residue_auth_asym_id _pdbx_modification_feature.modified_residue_auth_seq_id _pdbx_modification_feature.modified_residue_PDB_ins_code _pdbx_modification_feature.modified_residue_symmetry _pdbx_modification_feature.comp_id_linking_atom _pdbx_modification_feature.modified_residue_id_linking_atom _pdbx_modification_feature.modified_residue_id _pdbx_modification_feature.ref_pcm_id _pdbx_modification_feature.ref_comp_id _pdbx_modification_feature.type _pdbx_modification_feature.category 1 MSE A 42 A . . . . MSE A 149 ? 1_555 . . . . . . . MET 1 MSE Selenomethionine 'Named protein modification' 2 MSE A 42 B . . . . MSE A 149 ? 1_555 . . . . . . . MET 1 MSE Selenomethionine 'Named protein modification' # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 THR 119 A . ? THR 226 A ASN 120 A ? ASN 227 A 1 -0.18 2 ILE 125 A . ? ILE 232 A TYR 126 A ? TYR 233 A 1 -3.73 # _pdbx_entry_details.entry_id 3W2A _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? _pdbx_entry_details.has_protein_modification Y # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 HG A SER 161 ? ? O C HOH 102 ? ? 1.47 2 1 H A LEU 224 ? ? O A HOH 306 ? ? 1.54 3 1 HH21 A ARG 135 ? ? O A VAL 174 ? ? 1.54 4 1 O2 B DC 10 ? ? H22 C DG 19 ? ? 1.60 5 1 NH2 A ARG 135 ? ? O A VAL 174 ? ? 1.91 6 1 OP2 C DG 14 ? ? O C HOH 102 ? ? 1.93 7 1 OG A SER 150 ? ? OD1 A ASP 153 ? ? 2.09 8 1 O2 B DT 12 ? ? O B HOH 106 ? ? 2.10 9 1 "O3'" C DC 8 ? ? O C HOH 104 ? ? 2.10 10 1 OP2 B DT 14 ? ? O B HOH 108 ? ? 2.11 11 1 OP1 B DC 15 ? ? O B HOH 101 ? ? 2.11 12 1 O A ALA 185 ? ? O A HOH 313 ? ? 2.15 13 1 N A ASP 225 ? ? O A HOH 306 ? ? 2.16 14 1 N7 B DA 22 ? ? O B HOH 105 ? ? 2.16 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O4'" B DC 7 ? ? "C1'" B DC 7 ? ? N1 B DC 7 ? ? 110.40 108.30 2.10 0.30 N 2 1 "O4'" B DT 9 ? ? "C1'" B DT 9 ? ? N1 B DT 9 ? ? 110.75 108.30 2.45 0.30 N 3 1 "O4'" B DG 21 ? ? "C1'" B DG 21 ? ? N9 B DG 21 ? ? 110.44 108.30 2.14 0.30 N 4 1 "O4'" B DA 22 ? ? "C1'" B DA 22 ? ? N9 B DA 22 ? ? 110.22 108.30 1.92 0.30 N 5 1 "O4'" C DT 6 ? ? "C1'" C DT 6 ? ? N1 C DT 6 ? ? 110.86 108.30 2.56 0.30 N 6 1 "O4'" C DA 21 ? ? "C1'" C DA 21 ? ? N9 C DA 21 ? ? 112.97 108.30 4.67 0.30 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 PRO A 175 ? ? -38.93 119.36 2 1 TYR A 193 ? ? -49.69 -17.47 3 1 ILE A 232 ? ? -161.90 79.84 4 1 TYR A 233 ? ? 71.85 -94.48 5 1 LYS A 234 ? ? -37.70 -33.49 # _pdbx_struct_mod_residue.id 1 _pdbx_struct_mod_residue.label_asym_id A _pdbx_struct_mod_residue.label_comp_id MSE _pdbx_struct_mod_residue.label_seq_id 42 _pdbx_struct_mod_residue.auth_asym_id A _pdbx_struct_mod_residue.auth_comp_id MSE _pdbx_struct_mod_residue.auth_seq_id 149 _pdbx_struct_mod_residue.PDB_ins_code ? _pdbx_struct_mod_residue.parent_comp_id MET _pdbx_struct_mod_residue.details SELENOMETHIONINE # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] 'X-RAY DIFFRACTION' 1 ? refined 42.0512 12.8709 5.2327 0.5260 0.4648 0.4870 -0.0901 0.1620 0.0527 0.9045 3.2007 3.8570 0.5477 -1.9338 -0.5429 -0.2745 -0.2234 0.2594 0.1288 -0.0864 -0.7717 -0.8992 -0.5973 0.1804 'X-RAY DIFFRACTION' 2 ? refined 38.4998 6.7145 -4.3825 0.9860 0.5572 0.5652 0.0349 0.0728 0.0652 5.1141 4.7738 2.8589 -3.7842 -0.5835 2.7375 -0.1439 0.5000 -0.0018 1.0673 0.4479 0.1985 -1.0505 -0.3062 0.1591 'X-RAY DIFFRACTION' 3 ? refined 38.6997 5.4826 6.2270 0.4441 0.4139 0.3840 -0.0123 0.0669 0.0522 3.6725 4.8281 3.8593 0.0243 -0.1302 0.3972 0.0431 0.2451 -0.4708 0.2369 0.2059 0.3318 -0.5828 0.1655 -0.1878 'X-RAY DIFFRACTION' 4 ? refined 39.4428 17.1291 22.1213 0.5439 0.4229 0.4677 -0.0350 0.1465 0.1506 1.5005 2.2182 6.7417 1.5393 2.1915 0.7471 0.2787 -0.2618 0.1479 0.4828 1.0726 -0.8394 0.8571 -0.2637 0.8616 'X-RAY DIFFRACTION' 5 ? refined 38.1505 6.8663 20.0081 0.8097 0.4656 0.4052 0.2200 0.1233 0.0355 2.6539 8.6936 2.0679 -1.8601 -2.2127 -3.1396 -0.2581 0.1964 -0.1953 -0.4178 -0.4252 -0.3268 -0.3012 0.8996 0.0696 'X-RAY DIFFRACTION' 6 ? refined 26.8333 19.3958 18.8485 0.8518 0.6278 0.6778 0.1667 0.0086 -0.0147 2.8602 4.1551 1.9014 -0.4453 0.1612 -0.1086 0.4756 -0.7909 0.3044 0.6172 0.4818 1.9100 -0.8151 -0.9554 -0.9662 'X-RAY DIFFRACTION' 7 ? refined 34.4429 20.5357 33.4333 1.0745 0.0527 -1.0237 -0.3890 1.0073 0.6387 2.0914 7.0730 7.5125 0.2964 5.1986 1.6959 -0.7360 -0.4845 0.0355 -0.3698 0.2392 -0.7455 -0.0910 -0.3604 -0.4171 'X-RAY DIFFRACTION' 8 ? refined 42.5866 12.7745 38.5356 1.8189 0.8676 0.6282 0.0738 -0.0432 0.0773 4.5095 2.0184 7.9336 -1.6903 5.9634 -0.6581 1.0731 0.6854 -1.1895 -1.0516 0.5090 -0.3379 0.1876 -0.0600 1.1909 'X-RAY DIFFRACTION' 9 ? refined 37.3421 9.1844 31.3337 0.9151 0.5751 0.4879 0.0783 0.2689 -0.0275 1.1134 5.0460 2.5035 -1.7216 1.1547 -0.2517 0.4156 0.1274 -0.1146 -1.2321 0.4447 -0.8089 -0.6137 0.3424 0.5456 'X-RAY DIFFRACTION' 10 ? refined 24.6938 13.4258 28.2612 1.2786 0.8725 0.8550 -0.1253 0.0805 0.1636 6.8373 2.2971 3.9433 -1.3985 -4.6605 -0.2917 0.3962 0.1491 -0.3081 -0.0621 0.3810 1.4995 -0.0041 0.0501 -1.5644 'X-RAY DIFFRACTION' 11 ? refined 11.6248 -3.9312 -9.5106 1.5413 2.9397 2.9600 -0.5523 -0.0929 -0.1142 0.7118 0.0262 0.5261 0.1328 0.6160 0.1111 -0.3159 -0.5795 0.6007 -0.1272 -0.2629 0.8670 0.3144 -0.2618 -0.4865 'X-RAY DIFFRACTION' 12 ? refined 36.6849 -5.4586 10.5025 0.5588 0.4910 0.5653 -0.1015 -0.2605 -0.0463 2.9402 4.0378 3.3931 -0.3646 -1.5125 -1.4714 0.2090 0.1343 -0.2209 0.2582 -0.5802 0.2771 -0.3680 -0.2178 0.4615 'X-RAY DIFFRACTION' 13 ? refined 53.8054 -12.3235 35.8519 1.7486 2.0479 1.0022 0.0742 -0.4384 0.1645 3.7741 0.9027 4.5675 1.6200 -0.9622 0.5276 -0.3416 0.3751 -0.1678 -0.6577 -0.9323 0.1394 0.6540 0.6139 -0.2610 'X-RAY DIFFRACTION' 14 ? refined 41.7944 -8.3046 17.6041 0.4742 0.5507 0.6766 0.0985 -0.1236 0.1037 3.1735 4.4134 5.1553 0.2075 -0.0448 1.3496 0.1616 0.4852 -0.4415 -0.2147 -1.0920 0.2889 0.0386 0.1009 0.7868 'X-RAY DIFFRACTION' 15 ? refined 18.4085 2.3324 -10.2080 2.4809 1.3885 0.6752 0.6867 -1.9461 0.5740 1.9500 2.0046 4.5337 -3.8039 -5.1877 -5.7360 0.4616 1.7061 -0.8699 0.7192 -0.2956 -0.7291 -0.9468 1.0041 -1.0470 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection_details _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection 'X-RAY DIFFRACTION' 1 1 A 133 A 147 '(CHAIN A AND RESID 133:147)' ? ? ? ? ? 'X-RAY DIFFRACTION' 2 2 A 148 A 157 '(CHAIN A AND RESID 148:157)' ? ? ? ? ? 'X-RAY DIFFRACTION' 3 3 A 158 A 174 '(CHAIN A AND RESID 158:174)' ? ? ? ? ? 'X-RAY DIFFRACTION' 4 4 A 175 A 184 '(CHAIN A AND RESID 175:184)' ? ? ? ? ? 'X-RAY DIFFRACTION' 5 5 A 185 A 196 '(CHAIN A AND RESID 185:196)' ? ? ? ? ? 'X-RAY DIFFRACTION' 6 6 A 197 A 216 '(CHAIN A AND RESID 197:216)' ? ? ? ? ? 'X-RAY DIFFRACTION' 7 7 A 217 A 223 '(CHAIN A AND RESID 217:223)' ? ? ? ? ? 'X-RAY DIFFRACTION' 8 8 A 224 A 229 '(CHAIN A AND RESID 224:229)' ? ? ? ? ? 'X-RAY DIFFRACTION' 9 9 A 230 A 240 '(CHAIN A AND RESID 230:240)' ? ? ? ? ? 'X-RAY DIFFRACTION' 10 10 A 241 A 246 '(CHAIN A AND RESID 241:246)' ? ? ? ? ? 'X-RAY DIFFRACTION' 11 11 B 4 B 7 '(CHAIN B AND RESID 4:7)' ? ? ? ? ? 'X-RAY DIFFRACTION' 12 12 B 8 B 22 '(CHAIN B AND RESID 8:22)' ? ? ? ? ? 'X-RAY DIFFRACTION' 13 13 B 23 B 26 '(CHAIN B AND RESID 23:26)' ? ? ? ? ? 'X-RAY DIFFRACTION' 14 14 C 3 C 20 '(CHAIN C AND RESID 3:20)' ? ? ? ? ? 'X-RAY DIFFRACTION' 15 15 C 21 C 25 '(CHAIN C AND RESID 21:25)' ? ? ? ? ? # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MSE 108 ? A MSE 1 2 1 Y 1 A GLY 109 ? A GLY 2 3 1 Y 1 A SER 110 ? A SER 3 4 1 Y 1 A SER 111 ? A SER 4 5 1 Y 1 A HIS 112 ? A HIS 5 6 1 Y 1 A HIS 113 ? A HIS 6 7 1 Y 1 A HIS 114 ? A HIS 7 8 1 Y 1 A HIS 115 ? A HIS 8 9 1 Y 1 A HIS 116 ? A HIS 9 10 1 Y 1 A HIS 117 ? A HIS 10 11 1 Y 1 A SER 118 ? A SER 11 12 1 Y 1 A SER 119 ? A SER 12 13 1 Y 1 A GLY 120 ? A GLY 13 14 1 Y 1 A LEU 121 ? A LEU 14 15 1 Y 1 A VAL 122 ? A VAL 15 16 1 Y 1 A PRO 123 ? A PRO 16 17 1 Y 1 A ARG 124 ? A ARG 17 18 1 Y 1 A GLY 125 ? A GLY 18 19 1 Y 1 A SER 126 ? A SER 19 20 1 Y 1 A HIS 127 ? A HIS 20 21 1 Y 1 A MSE 128 ? A MSE 21 22 1 Y 1 A ALA 129 ? A ALA 22 23 1 Y 1 A LYS 130 ? A LYS 23 24 1 Y 1 A GLU 131 ? A GLU 24 25 1 Y 1 A HIS 132 ? A HIS 25 26 1 Y 1 A ARG 247 ? A ARG 140 27 1 Y 1 A LYS 248 ? A LYS 141 28 1 Y 1 A GLN 249 ? A GLN 142 29 1 Y 1 A ASN 250 ? A ASN 143 30 1 Y 1 B DT -2 ? B DT 1 31 1 Y 1 B DT -1 ? B DT 2 32 1 Y 1 B DT 0 ? B DT 3 33 1 Y 1 B DA 1 ? B DA 4 34 1 Y 1 B DA 2 ? B DA 5 35 1 Y 1 B DT 3 ? B DT 6 36 1 Y 1 B DC 27 ? B DC 30 37 1 Y 1 B DC 28 ? B DC 31 38 1 Y 1 C DA -2 ? C DA 1 39 1 Y 1 C DA -1 ? C DA 2 40 1 Y 1 C DA 0 ? C DA 3 41 1 Y 1 C DG 1 ? C DG 4 42 1 Y 1 C DG 2 ? C DG 5 43 1 Y 1 C DA 26 ? C DA 29 44 1 Y 1 C DT 27 ? C DT 30 45 1 Y 1 C DT 28 ? C DT 31 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 DA OP3 O N N 74 DA P P N N 75 DA OP1 O N N 76 DA OP2 O N N 77 DA "O5'" O N N 78 DA "C5'" C N N 79 DA "C4'" C N R 80 DA "O4'" O N N 81 DA "C3'" C N S 82 DA "O3'" O N N 83 DA "C2'" C N N 84 DA "C1'" C N R 85 DA N9 N Y N 86 DA C8 C Y N 87 DA N7 N Y N 88 DA C5 C Y N 89 DA C6 C Y N 90 DA N6 N N N 91 DA N1 N Y N 92 DA C2 C Y N 93 DA N3 N Y N 94 DA C4 C Y N 95 DA HOP3 H N N 96 DA HOP2 H N N 97 DA "H5'" H N N 98 DA "H5''" H N N 99 DA "H4'" H N N 100 DA "H3'" H N N 101 DA "HO3'" H N N 102 DA "H2'" H N N 103 DA "H2''" H N N 104 DA "H1'" H N N 105 DA H8 H N N 106 DA H61 H N N 107 DA H62 H N N 108 DA H2 H N N 109 DC OP3 O N N 110 DC P P N N 111 DC OP1 O N N 112 DC OP2 O N N 113 DC "O5'" O N N 114 DC "C5'" C N N 115 DC "C4'" C N R 116 DC "O4'" O N N 117 DC "C3'" C N S 118 DC "O3'" O N N 119 DC "C2'" C N N 120 DC "C1'" C N R 121 DC N1 N N N 122 DC C2 C N N 123 DC O2 O N N 124 DC N3 N N N 125 DC C4 C N N 126 DC N4 N N N 127 DC C5 C N N 128 DC C6 C N N 129 DC HOP3 H N N 130 DC HOP2 H N N 131 DC "H5'" H N N 132 DC "H5''" H N N 133 DC "H4'" H N N 134 DC "H3'" H N N 135 DC "HO3'" H N N 136 DC "H2'" H N N 137 DC "H2''" H N N 138 DC "H1'" H N N 139 DC H41 H N N 140 DC H42 H N N 141 DC H5 H N N 142 DC H6 H N N 143 DG OP3 O N N 144 DG P P N N 145 DG OP1 O N N 146 DG OP2 O N N 147 DG "O5'" O N N 148 DG "C5'" C N N 149 DG "C4'" C N R 150 DG "O4'" O N N 151 DG "C3'" C N S 152 DG "O3'" O N N 153 DG "C2'" C N N 154 DG "C1'" C N R 155 DG N9 N Y N 156 DG C8 C Y N 157 DG N7 N Y N 158 DG C5 C Y N 159 DG C6 C N N 160 DG O6 O N N 161 DG N1 N N N 162 DG C2 C N N 163 DG N2 N N N 164 DG N3 N N N 165 DG C4 C Y N 166 DG HOP3 H N N 167 DG HOP2 H N N 168 DG "H5'" H N N 169 DG "H5''" H N N 170 DG "H4'" H N N 171 DG "H3'" H N N 172 DG "HO3'" H N N 173 DG "H2'" H N N 174 DG "H2''" H N N 175 DG "H1'" H N N 176 DG H8 H N N 177 DG H1 H N N 178 DG H21 H N N 179 DG H22 H N N 180 DT OP3 O N N 181 DT P P N N 182 DT OP1 O N N 183 DT OP2 O N N 184 DT "O5'" O N N 185 DT "C5'" C N N 186 DT "C4'" C N R 187 DT "O4'" O N N 188 DT "C3'" C N S 189 DT "O3'" O N N 190 DT "C2'" C N N 191 DT "C1'" C N R 192 DT N1 N N N 193 DT C2 C N N 194 DT O2 O N N 195 DT N3 N N N 196 DT C4 C N N 197 DT O4 O N N 198 DT C5 C N N 199 DT C7 C N N 200 DT C6 C N N 201 DT HOP3 H N N 202 DT HOP2 H N N 203 DT "H5'" H N N 204 DT "H5''" H N N 205 DT "H4'" H N N 206 DT "H3'" H N N 207 DT "HO3'" H N N 208 DT "H2'" H N N 209 DT "H2''" H N N 210 DT "H1'" H N N 211 DT H3 H N N 212 DT H71 H N N 213 DT H72 H N N 214 DT H73 H N N 215 DT H6 H N N 216 GLN N N N N 217 GLN CA C N S 218 GLN C C N N 219 GLN O O N N 220 GLN CB C N N 221 GLN CG C N N 222 GLN CD C N N 223 GLN OE1 O N N 224 GLN NE2 N N N 225 GLN OXT O N N 226 GLN H H N N 227 GLN H2 H N N 228 GLN HA H N N 229 GLN HB2 H N N 230 GLN HB3 H N N 231 GLN HG2 H N N 232 GLN HG3 H N N 233 GLN HE21 H N N 234 GLN HE22 H N N 235 GLN HXT H N N 236 GLU N N N N 237 GLU CA C N S 238 GLU C C N N 239 GLU O O N N 240 GLU CB C N N 241 GLU CG C N N 242 GLU CD C N N 243 GLU OE1 O N N 244 GLU OE2 O N N 245 GLU OXT O N N 246 GLU H H N N 247 GLU H2 H N N 248 GLU HA H N N 249 GLU HB2 H N N 250 GLU HB3 H N N 251 GLU HG2 H N N 252 GLU HG3 H N N 253 GLU HE2 H N N 254 GLU HXT H N N 255 GLY N N N N 256 GLY CA C N N 257 GLY C C N N 258 GLY O O N N 259 GLY OXT O N N 260 GLY H H N N 261 GLY H2 H N N 262 GLY HA2 H N N 263 GLY HA3 H N N 264 GLY HXT H N N 265 HIS N N N N 266 HIS CA C N S 267 HIS C C N N 268 HIS O O N N 269 HIS CB C N N 270 HIS CG C Y N 271 HIS ND1 N Y N 272 HIS CD2 C Y N 273 HIS CE1 C Y N 274 HIS NE2 N Y N 275 HIS OXT O N N 276 HIS H H N N 277 HIS H2 H N N 278 HIS HA H N N 279 HIS HB2 H N N 280 HIS HB3 H N N 281 HIS HD1 H N N 282 HIS HD2 H N N 283 HIS HE1 H N N 284 HIS HE2 H N N 285 HIS HXT H N N 286 HOH O O N N 287 HOH H1 H N N 288 HOH H2 H N N 289 ILE N N N N 290 ILE CA C N S 291 ILE C C N N 292 ILE O O N N 293 ILE CB C N S 294 ILE CG1 C N N 295 ILE CG2 C N N 296 ILE CD1 C N N 297 ILE OXT O N N 298 ILE H H N N 299 ILE H2 H N N 300 ILE HA H N N 301 ILE HB H N N 302 ILE HG12 H N N 303 ILE HG13 H N N 304 ILE HG21 H N N 305 ILE HG22 H N N 306 ILE HG23 H N N 307 ILE HD11 H N N 308 ILE HD12 H N N 309 ILE HD13 H N N 310 ILE HXT H N N 311 LEU N N N N 312 LEU CA C N S 313 LEU C C N N 314 LEU O O N N 315 LEU CB C N N 316 LEU CG C N N 317 LEU CD1 C N N 318 LEU CD2 C N N 319 LEU OXT O N N 320 LEU H H N N 321 LEU H2 H N N 322 LEU HA H N N 323 LEU HB2 H N N 324 LEU HB3 H N N 325 LEU HG H N N 326 LEU HD11 H N N 327 LEU HD12 H N N 328 LEU HD13 H N N 329 LEU HD21 H N N 330 LEU HD22 H N N 331 LEU HD23 H N N 332 LEU HXT H N N 333 LYS N N N N 334 LYS CA C N S 335 LYS C C N N 336 LYS O O N N 337 LYS CB C N N 338 LYS CG C N N 339 LYS CD C N N 340 LYS CE C N N 341 LYS NZ N N N 342 LYS OXT O N N 343 LYS H H N N 344 LYS H2 H N N 345 LYS HA H N N 346 LYS HB2 H N N 347 LYS HB3 H N N 348 LYS HG2 H N N 349 LYS HG3 H N N 350 LYS HD2 H N N 351 LYS HD3 H N N 352 LYS HE2 H N N 353 LYS HE3 H N N 354 LYS HZ1 H N N 355 LYS HZ2 H N N 356 LYS HZ3 H N N 357 LYS HXT H N N 358 MSE N N N N 359 MSE CA C N S 360 MSE C C N N 361 MSE O O N N 362 MSE OXT O N N 363 MSE CB C N N 364 MSE CG C N N 365 MSE SE SE N N 366 MSE CE C N N 367 MSE H H N N 368 MSE H2 H N N 369 MSE HA H N N 370 MSE HXT H N N 371 MSE HB2 H N N 372 MSE HB3 H N N 373 MSE HG2 H N N 374 MSE HG3 H N N 375 MSE HE1 H N N 376 MSE HE2 H N N 377 MSE HE3 H N N 378 PHE N N N N 379 PHE CA C N S 380 PHE C C N N 381 PHE O O N N 382 PHE CB C N N 383 PHE CG C Y N 384 PHE CD1 C Y N 385 PHE CD2 C Y N 386 PHE CE1 C Y N 387 PHE CE2 C Y N 388 PHE CZ C Y N 389 PHE OXT O N N 390 PHE H H N N 391 PHE H2 H N N 392 PHE HA H N N 393 PHE HB2 H N N 394 PHE HB3 H N N 395 PHE HD1 H N N 396 PHE HD2 H N N 397 PHE HE1 H N N 398 PHE HE2 H N N 399 PHE HZ H N N 400 PHE HXT H N N 401 PRO N N N N 402 PRO CA C N S 403 PRO C C N N 404 PRO O O N N 405 PRO CB C N N 406 PRO CG C N N 407 PRO CD C N N 408 PRO OXT O N N 409 PRO H H N N 410 PRO HA H N N 411 PRO HB2 H N N 412 PRO HB3 H N N 413 PRO HG2 H N N 414 PRO HG3 H N N 415 PRO HD2 H N N 416 PRO HD3 H N N 417 PRO HXT H N N 418 SER N N N N 419 SER CA C N S 420 SER C C N N 421 SER O O N N 422 SER CB C N N 423 SER OG O N N 424 SER OXT O N N 425 SER H H N N 426 SER H2 H N N 427 SER HA H N N 428 SER HB2 H N N 429 SER HB3 H N N 430 SER HG H N N 431 SER HXT H N N 432 THR N N N N 433 THR CA C N S 434 THR C C N N 435 THR O O N N 436 THR CB C N R 437 THR OG1 O N N 438 THR CG2 C N N 439 THR OXT O N N 440 THR H H N N 441 THR H2 H N N 442 THR HA H N N 443 THR HB H N N 444 THR HG1 H N N 445 THR HG21 H N N 446 THR HG22 H N N 447 THR HG23 H N N 448 THR HXT H N N 449 TYR N N N N 450 TYR CA C N S 451 TYR C C N N 452 TYR O O N N 453 TYR CB C N N 454 TYR CG C Y N 455 TYR CD1 C Y N 456 TYR CD2 C Y N 457 TYR CE1 C Y N 458 TYR CE2 C Y N 459 TYR CZ C Y N 460 TYR OH O N N 461 TYR OXT O N N 462 TYR H H N N 463 TYR H2 H N N 464 TYR HA H N N 465 TYR HB2 H N N 466 TYR HB3 H N N 467 TYR HD1 H N N 468 TYR HD2 H N N 469 TYR HE1 H N N 470 TYR HE2 H N N 471 TYR HH H N N 472 TYR HXT H N N 473 VAL N N N N 474 VAL CA C N S 475 VAL C C N N 476 VAL O O N N 477 VAL CB C N N 478 VAL CG1 C N N 479 VAL CG2 C N N 480 VAL OXT O N N 481 VAL H H N N 482 VAL H2 H N N 483 VAL HA H N N 484 VAL HB H N N 485 VAL HG11 H N N 486 VAL HG12 H N N 487 VAL HG13 H N N 488 VAL HG21 H N N 489 VAL HG22 H N N 490 VAL HG23 H N N 491 VAL HXT H N N 492 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 DA OP3 P sing N N 70 DA OP3 HOP3 sing N N 71 DA P OP1 doub N N 72 DA P OP2 sing N N 73 DA P "O5'" sing N N 74 DA OP2 HOP2 sing N N 75 DA "O5'" "C5'" sing N N 76 DA "C5'" "C4'" sing N N 77 DA "C5'" "H5'" sing N N 78 DA "C5'" "H5''" sing N N 79 DA "C4'" "O4'" sing N N 80 DA "C4'" "C3'" sing N N 81 DA "C4'" "H4'" sing N N 82 DA "O4'" "C1'" sing N N 83 DA "C3'" "O3'" sing N N 84 DA "C3'" "C2'" sing N N 85 DA "C3'" "H3'" sing N N 86 DA "O3'" "HO3'" sing N N 87 DA "C2'" "C1'" sing N N 88 DA "C2'" "H2'" sing N N 89 DA "C2'" "H2''" sing N N 90 DA "C1'" N9 sing N N 91 DA "C1'" "H1'" sing N N 92 DA N9 C8 sing Y N 93 DA N9 C4 sing Y N 94 DA C8 N7 doub Y N 95 DA C8 H8 sing N N 96 DA N7 C5 sing Y N 97 DA C5 C6 sing Y N 98 DA C5 C4 doub Y N 99 DA C6 N6 sing N N 100 DA C6 N1 doub Y N 101 DA N6 H61 sing N N 102 DA N6 H62 sing N N 103 DA N1 C2 sing Y N 104 DA C2 N3 doub Y N 105 DA C2 H2 sing N N 106 DA N3 C4 sing Y N 107 DC OP3 P sing N N 108 DC OP3 HOP3 sing N N 109 DC P OP1 doub N N 110 DC P OP2 sing N N 111 DC P "O5'" sing N N 112 DC OP2 HOP2 sing N N 113 DC "O5'" "C5'" sing N N 114 DC "C5'" "C4'" sing N N 115 DC "C5'" "H5'" sing N N 116 DC "C5'" "H5''" sing N N 117 DC "C4'" "O4'" sing N N 118 DC "C4'" "C3'" sing N N 119 DC "C4'" "H4'" sing N N 120 DC "O4'" "C1'" sing N N 121 DC "C3'" "O3'" sing N N 122 DC "C3'" "C2'" sing N N 123 DC "C3'" "H3'" sing N N 124 DC "O3'" "HO3'" sing N N 125 DC "C2'" "C1'" sing N N 126 DC "C2'" "H2'" sing N N 127 DC "C2'" "H2''" sing N N 128 DC "C1'" N1 sing N N 129 DC "C1'" "H1'" sing N N 130 DC N1 C2 sing N N 131 DC N1 C6 sing N N 132 DC C2 O2 doub N N 133 DC C2 N3 sing N N 134 DC N3 C4 doub N N 135 DC C4 N4 sing N N 136 DC C4 C5 sing N N 137 DC N4 H41 sing N N 138 DC N4 H42 sing N N 139 DC C5 C6 doub N N 140 DC C5 H5 sing N N 141 DC C6 H6 sing N N 142 DG OP3 P sing N N 143 DG OP3 HOP3 sing N N 144 DG P OP1 doub N N 145 DG P OP2 sing N N 146 DG P "O5'" sing N N 147 DG OP2 HOP2 sing N N 148 DG "O5'" "C5'" sing N N 149 DG "C5'" "C4'" sing N N 150 DG "C5'" "H5'" sing N N 151 DG "C5'" "H5''" sing N N 152 DG "C4'" "O4'" sing N N 153 DG "C4'" "C3'" sing N N 154 DG "C4'" "H4'" sing N N 155 DG "O4'" "C1'" sing N N 156 DG "C3'" "O3'" sing N N 157 DG "C3'" "C2'" sing N N 158 DG "C3'" "H3'" sing N N 159 DG "O3'" "HO3'" sing N N 160 DG "C2'" "C1'" sing N N 161 DG "C2'" "H2'" sing N N 162 DG "C2'" "H2''" sing N N 163 DG "C1'" N9 sing N N 164 DG "C1'" "H1'" sing N N 165 DG N9 C8 sing Y N 166 DG N9 C4 sing Y N 167 DG C8 N7 doub Y N 168 DG C8 H8 sing N N 169 DG N7 C5 sing Y N 170 DG C5 C6 sing N N 171 DG C5 C4 doub Y N 172 DG C6 O6 doub N N 173 DG C6 N1 sing N N 174 DG N1 C2 sing N N 175 DG N1 H1 sing N N 176 DG C2 N2 sing N N 177 DG C2 N3 doub N N 178 DG N2 H21 sing N N 179 DG N2 H22 sing N N 180 DG N3 C4 sing N N 181 DT OP3 P sing N N 182 DT OP3 HOP3 sing N N 183 DT P OP1 doub N N 184 DT P OP2 sing N N 185 DT P "O5'" sing N N 186 DT OP2 HOP2 sing N N 187 DT "O5'" "C5'" sing N N 188 DT "C5'" "C4'" sing N N 189 DT "C5'" "H5'" sing N N 190 DT "C5'" "H5''" sing N N 191 DT "C4'" "O4'" sing N N 192 DT "C4'" "C3'" sing N N 193 DT "C4'" "H4'" sing N N 194 DT "O4'" "C1'" sing N N 195 DT "C3'" "O3'" sing N N 196 DT "C3'" "C2'" sing N N 197 DT "C3'" "H3'" sing N N 198 DT "O3'" "HO3'" sing N N 199 DT "C2'" "C1'" sing N N 200 DT "C2'" "H2'" sing N N 201 DT "C2'" "H2''" sing N N 202 DT "C1'" N1 sing N N 203 DT "C1'" "H1'" sing N N 204 DT N1 C2 sing N N 205 DT N1 C6 sing N N 206 DT C2 O2 doub N N 207 DT C2 N3 sing N N 208 DT N3 C4 sing N N 209 DT N3 H3 sing N N 210 DT C4 O4 doub N N 211 DT C4 C5 sing N N 212 DT C5 C7 sing N N 213 DT C5 C6 doub N N 214 DT C7 H71 sing N N 215 DT C7 H72 sing N N 216 DT C7 H73 sing N N 217 DT C6 H6 sing N N 218 GLN N CA sing N N 219 GLN N H sing N N 220 GLN N H2 sing N N 221 GLN CA C sing N N 222 GLN CA CB sing N N 223 GLN CA HA sing N N 224 GLN C O doub N N 225 GLN C OXT sing N N 226 GLN CB CG sing N N 227 GLN CB HB2 sing N N 228 GLN CB HB3 sing N N 229 GLN CG CD sing N N 230 GLN CG HG2 sing N N 231 GLN CG HG3 sing N N 232 GLN CD OE1 doub N N 233 GLN CD NE2 sing N N 234 GLN NE2 HE21 sing N N 235 GLN NE2 HE22 sing N N 236 GLN OXT HXT sing N N 237 GLU N CA sing N N 238 GLU N H sing N N 239 GLU N H2 sing N N 240 GLU CA C sing N N 241 GLU CA CB sing N N 242 GLU CA HA sing N N 243 GLU C O doub N N 244 GLU C OXT sing N N 245 GLU CB CG sing N N 246 GLU CB HB2 sing N N 247 GLU CB HB3 sing N N 248 GLU CG CD sing N N 249 GLU CG HG2 sing N N 250 GLU CG HG3 sing N N 251 GLU CD OE1 doub N N 252 GLU CD OE2 sing N N 253 GLU OE2 HE2 sing N N 254 GLU OXT HXT sing N N 255 GLY N CA sing N N 256 GLY N H sing N N 257 GLY N H2 sing N N 258 GLY CA C sing N N 259 GLY CA HA2 sing N N 260 GLY CA HA3 sing N N 261 GLY C O doub N N 262 GLY C OXT sing N N 263 GLY OXT HXT sing N N 264 HIS N CA sing N N 265 HIS N H sing N N 266 HIS N H2 sing N N 267 HIS CA C sing N N 268 HIS CA CB sing N N 269 HIS CA HA sing N N 270 HIS C O doub N N 271 HIS C OXT sing N N 272 HIS CB CG sing N N 273 HIS CB HB2 sing N N 274 HIS CB HB3 sing N N 275 HIS CG ND1 sing Y N 276 HIS CG CD2 doub Y N 277 HIS ND1 CE1 doub Y N 278 HIS ND1 HD1 sing N N 279 HIS CD2 NE2 sing Y N 280 HIS CD2 HD2 sing N N 281 HIS CE1 NE2 sing Y N 282 HIS CE1 HE1 sing N N 283 HIS NE2 HE2 sing N N 284 HIS OXT HXT sing N N 285 HOH O H1 sing N N 286 HOH O H2 sing N N 287 ILE N CA sing N N 288 ILE N H sing N N 289 ILE N H2 sing N N 290 ILE CA C sing N N 291 ILE CA CB sing N N 292 ILE CA HA sing N N 293 ILE C O doub N N 294 ILE C OXT sing N N 295 ILE CB CG1 sing N N 296 ILE CB CG2 sing N N 297 ILE CB HB sing N N 298 ILE CG1 CD1 sing N N 299 ILE CG1 HG12 sing N N 300 ILE CG1 HG13 sing N N 301 ILE CG2 HG21 sing N N 302 ILE CG2 HG22 sing N N 303 ILE CG2 HG23 sing N N 304 ILE CD1 HD11 sing N N 305 ILE CD1 HD12 sing N N 306 ILE CD1 HD13 sing N N 307 ILE OXT HXT sing N N 308 LEU N CA sing N N 309 LEU N H sing N N 310 LEU N H2 sing N N 311 LEU CA C sing N N 312 LEU CA CB sing N N 313 LEU CA HA sing N N 314 LEU C O doub N N 315 LEU C OXT sing N N 316 LEU CB CG sing N N 317 LEU CB HB2 sing N N 318 LEU CB HB3 sing N N 319 LEU CG CD1 sing N N 320 LEU CG CD2 sing N N 321 LEU CG HG sing N N 322 LEU CD1 HD11 sing N N 323 LEU CD1 HD12 sing N N 324 LEU CD1 HD13 sing N N 325 LEU CD2 HD21 sing N N 326 LEU CD2 HD22 sing N N 327 LEU CD2 HD23 sing N N 328 LEU OXT HXT sing N N 329 LYS N CA sing N N 330 LYS N H sing N N 331 LYS N H2 sing N N 332 LYS CA C sing N N 333 LYS CA CB sing N N 334 LYS CA HA sing N N 335 LYS C O doub N N 336 LYS C OXT sing N N 337 LYS CB CG sing N N 338 LYS CB HB2 sing N N 339 LYS CB HB3 sing N N 340 LYS CG CD sing N N 341 LYS CG HG2 sing N N 342 LYS CG HG3 sing N N 343 LYS CD CE sing N N 344 LYS CD HD2 sing N N 345 LYS CD HD3 sing N N 346 LYS CE NZ sing N N 347 LYS CE HE2 sing N N 348 LYS CE HE3 sing N N 349 LYS NZ HZ1 sing N N 350 LYS NZ HZ2 sing N N 351 LYS NZ HZ3 sing N N 352 LYS OXT HXT sing N N 353 MSE N CA sing N N 354 MSE N H sing N N 355 MSE N H2 sing N N 356 MSE CA C sing N N 357 MSE CA CB sing N N 358 MSE CA HA sing N N 359 MSE C O doub N N 360 MSE C OXT sing N N 361 MSE OXT HXT sing N N 362 MSE CB CG sing N N 363 MSE CB HB2 sing N N 364 MSE CB HB3 sing N N 365 MSE CG SE sing N N 366 MSE CG HG2 sing N N 367 MSE CG HG3 sing N N 368 MSE SE CE sing N N 369 MSE CE HE1 sing N N 370 MSE CE HE2 sing N N 371 MSE CE HE3 sing N N 372 PHE N CA sing N N 373 PHE N H sing N N 374 PHE N H2 sing N N 375 PHE CA C sing N N 376 PHE CA CB sing N N 377 PHE CA HA sing N N 378 PHE C O doub N N 379 PHE C OXT sing N N 380 PHE CB CG sing N N 381 PHE CB HB2 sing N N 382 PHE CB HB3 sing N N 383 PHE CG CD1 doub Y N 384 PHE CG CD2 sing Y N 385 PHE CD1 CE1 sing Y N 386 PHE CD1 HD1 sing N N 387 PHE CD2 CE2 doub Y N 388 PHE CD2 HD2 sing N N 389 PHE CE1 CZ doub Y N 390 PHE CE1 HE1 sing N N 391 PHE CE2 CZ sing Y N 392 PHE CE2 HE2 sing N N 393 PHE CZ HZ sing N N 394 PHE OXT HXT sing N N 395 PRO N CA sing N N 396 PRO N CD sing N N 397 PRO N H sing N N 398 PRO CA C sing N N 399 PRO CA CB sing N N 400 PRO CA HA sing N N 401 PRO C O doub N N 402 PRO C OXT sing N N 403 PRO CB CG sing N N 404 PRO CB HB2 sing N N 405 PRO CB HB3 sing N N 406 PRO CG CD sing N N 407 PRO CG HG2 sing N N 408 PRO CG HG3 sing N N 409 PRO CD HD2 sing N N 410 PRO CD HD3 sing N N 411 PRO OXT HXT sing N N 412 SER N CA sing N N 413 SER N H sing N N 414 SER N H2 sing N N 415 SER CA C sing N N 416 SER CA CB sing N N 417 SER CA HA sing N N 418 SER C O doub N N 419 SER C OXT sing N N 420 SER CB OG sing N N 421 SER CB HB2 sing N N 422 SER CB HB3 sing N N 423 SER OG HG sing N N 424 SER OXT HXT sing N N 425 THR N CA sing N N 426 THR N H sing N N 427 THR N H2 sing N N 428 THR CA C sing N N 429 THR CA CB sing N N 430 THR CA HA sing N N 431 THR C O doub N N 432 THR C OXT sing N N 433 THR CB OG1 sing N N 434 THR CB CG2 sing N N 435 THR CB HB sing N N 436 THR OG1 HG1 sing N N 437 THR CG2 HG21 sing N N 438 THR CG2 HG22 sing N N 439 THR CG2 HG23 sing N N 440 THR OXT HXT sing N N 441 TYR N CA sing N N 442 TYR N H sing N N 443 TYR N H2 sing N N 444 TYR CA C sing N N 445 TYR CA CB sing N N 446 TYR CA HA sing N N 447 TYR C O doub N N 448 TYR C OXT sing N N 449 TYR CB CG sing N N 450 TYR CB HB2 sing N N 451 TYR CB HB3 sing N N 452 TYR CG CD1 doub Y N 453 TYR CG CD2 sing Y N 454 TYR CD1 CE1 sing Y N 455 TYR CD1 HD1 sing N N 456 TYR CD2 CE2 doub Y N 457 TYR CD2 HD2 sing N N 458 TYR CE1 CZ doub Y N 459 TYR CE1 HE1 sing N N 460 TYR CE2 CZ sing Y N 461 TYR CE2 HE2 sing N N 462 TYR CZ OH sing N N 463 TYR OH HH sing N N 464 TYR OXT HXT sing N N 465 VAL N CA sing N N 466 VAL N H sing N N 467 VAL N H2 sing N N 468 VAL CA C sing N N 469 VAL CA CB sing N N 470 VAL CA HA sing N N 471 VAL C O doub N N 472 VAL C OXT sing N N 473 VAL CB CG1 sing N N 474 VAL CB CG2 sing N N 475 VAL CB HB sing N N 476 VAL CG1 HG11 sing N N 477 VAL CG1 HG12 sing N N 478 VAL CG1 HG13 sing N N 479 VAL CG2 HG21 sing N N 480 VAL CG2 HG22 sing N N 481 VAL CG2 HG23 sing N N 482 VAL OXT HXT sing N N 483 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 3W2A 'double helix' 3W2A 'b-form double helix' 3W2A 'triple helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 B DA 7 1_555 C DT 28 1_555 0.318 -0.231 -0.119 -1.812 -14.808 4.204 1 B_DA4:DT25_C B 4 ? C 25 ? 20 1 1 B DT 8 1_555 C DA 27 1_555 1.238 -0.127 0.633 0.295 -23.198 13.453 2 B_DT5:DA24_C B 5 ? C 24 ? ? 1 1 B DA 9 1_555 C DT 26 1_555 -0.145 -0.174 -0.561 -7.769 -9.088 -0.315 3 B_DA6:DT23_C B 6 ? C 23 ? 20 1 1 B DC 10 1_555 C DG 25 1_555 -0.424 0.123 -0.604 8.791 -6.464 -3.037 4 B_DC7:DG22_C B 7 ? C 22 ? 19 1 1 B DT 11 1_555 C DA 24 1_555 -0.901 -0.372 0.803 -13.530 -2.807 -7.305 5 B_DT8:DA21_C B 8 ? C 21 ? 20 1 1 B DT 12 1_555 C DA 23 1_555 -1.163 -0.239 0.002 6.973 -7.500 -8.307 6 B_DT9:DA20_C B 9 ? C 20 ? 20 1 1 B DC 13 1_555 C DG 22 1_555 0.364 -0.076 0.349 4.630 -9.766 5.880 7 B_DC10:DG19_C B 10 ? C 19 ? 19 1 1 B DA 14 1_555 C DT 21 1_555 0.511 0.057 0.502 5.868 -10.039 3.488 8 B_DA11:DT18_C B 11 ? C 18 ? 20 1 1 B DT 15 1_555 C DA 20 1_555 -0.184 0.111 0.463 4.051 -9.376 6.358 9 B_DT12:DA17_C B 12 ? C 17 ? 20 1 1 B DT 16 1_555 C DA 19 1_555 0.331 -0.045 0.646 -2.713 -10.442 -3.679 10 B_DT13:DA16_C B 13 ? C 16 ? 20 1 1 B DT 17 1_555 C DA 18 1_555 -0.132 -0.156 0.444 -8.889 -11.297 -4.127 11 B_DT14:DA15_C B 14 ? C 15 ? 20 1 1 B DC 18 1_555 C DG 17 1_555 0.277 -0.358 0.282 -18.044 0.564 -4.692 12 B_DC15:DG14_C B 15 ? C 14 ? 19 1 1 B DA 19 1_555 C DT 16 1_555 -0.354 -0.162 0.184 1.916 -5.707 2.792 13 B_DA16:DT13_C B 16 ? C 13 ? 20 1 1 B DT 20 1_555 C DA 15 1_555 -0.799 -0.203 -0.371 3.582 -14.270 -3.416 14 B_DT17:DA12_C B 17 ? C 12 ? 20 1 1 B DA 21 1_555 C DT 14 1_555 0.207 0.150 -0.026 -3.495 -5.911 13.280 15 B_DA18:DT11_C B 18 ? C 11 ? ? 1 1 B DC 22 1_555 C DG 13 1_555 0.006 -0.215 -0.027 -5.876 -9.603 2.734 16 B_DC19:DG10_C B 19 ? C 10 ? 19 1 1 B DT 23 1_555 C DA 12 1_555 0.391 -0.257 0.137 -6.142 -1.928 5.889 17 B_DT20:DA9_C B 20 ? C 9 ? 20 1 1 B DG 24 1_555 C DC 11 1_555 -0.547 -0.368 0.157 5.574 -10.631 0.061 18 B_DG21:DC8_C B 21 ? C 8 ? 19 1 1 B DA 25 1_555 C DT 10 1_555 -0.096 -0.191 0.345 9.755 -17.028 -3.233 19 B_DA22:DT7_C B 22 ? C 7 ? 20 1 1 B DA 26 1_555 C DT 9 1_555 0.280 -0.228 0.798 17.049 -16.028 -8.548 20 B_DA23:DT6_C B 23 ? C 6 ? 20 1 1 B DA 27 1_555 C DT 8 1_555 0.080 -0.023 1.152 21.818 -22.842 3.344 21 B_DA24:DT5_C B 24 ? C 5 ? 20 1 1 B DT 28 1_555 C DA 7 1_555 -0.275 -0.195 0.459 0.156 -17.358 -7.577 22 B_DT25:DA4_C B 25 ? C 4 ? 20 1 1 B DC 29 1_555 C DG 6 1_555 1.546 -0.385 0.037 11.162 -16.709 -0.207 23 B_DC26:DG3_C B 26 ? C 3 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 B DA 7 1_555 C DT 28 1_555 B DT 8 1_555 C DA 27 1_555 0.105 -0.949 3.660 -6.228 -17.803 44.863 0.466 -0.696 3.720 -22.204 7.767 48.477 1 BB_DA4DT5:DA24DT25_CC B 4 ? C 25 ? B 5 ? C 24 ? 1 B DT 8 1_555 C DA 27 1_555 B DA 9 1_555 C DT 26 1_555 -0.495 0.292 3.597 10.655 -3.459 27.285 1.364 3.409 3.128 -6.971 -21.474 29.455 2 BB_DT5DA6:DT23DA24_CC B 5 ? C 24 ? B 6 ? C 23 ? 1 B DA 9 1_555 C DT 26 1_555 B DC 10 1_555 C DG 25 1_555 -0.110 -0.579 2.639 -5.910 2.534 37.821 -1.136 -0.427 2.584 3.875 9.038 38.344 3 BB_DA6DC7:DG22DT23_CC B 6 ? C 23 ? B 7 ? C 22 ? 1 B DC 10 1_555 C DG 25 1_555 B DT 11 1_555 C DA 24 1_555 -0.262 -1.132 4.100 -3.483 -1.080 31.892 -1.803 -0.316 4.139 -1.957 6.313 32.094 4 BB_DC7DT8:DA21DG22_CC B 7 ? C 22 ? B 8 ? C 21 ? 1 B DT 11 1_555 C DA 24 1_555 B DT 12 1_555 C DA 23 1_555 0.014 -0.892 2.627 2.897 1.145 24.387 -2.375 0.679 2.567 2.695 -6.823 24.582 5 BB_DT8DT9:DA20DA21_CC B 8 ? C 21 ? B 9 ? C 20 ? 1 B DT 12 1_555 C DA 23 1_555 B DC 13 1_555 C DG 22 1_555 0.381 0.208 3.471 -1.621 -0.408 40.690 0.347 -0.738 3.452 -0.587 2.330 40.722 6 BB_DT9DC10:DG19DA20_CC B 9 ? C 20 ? B 10 ? C 19 ? 1 B DC 13 1_555 C DG 22 1_555 B DA 14 1_555 C DT 21 1_555 -0.236 -0.360 3.185 0.309 -0.817 39.265 -0.441 0.387 3.190 -1.216 -0.459 39.274 7 BB_DC10DA11:DT18DG19_CC B 10 ? C 19 ? B 11 ? C 18 ? 1 B DA 14 1_555 C DT 21 1_555 B DT 15 1_555 C DA 20 1_555 0.226 -1.060 3.234 0.673 -3.505 28.383 -1.344 -0.304 3.343 -7.112 -1.366 28.602 8 BB_DA11DT12:DA17DT18_CC B 11 ? C 18 ? B 12 ? C 17 ? 1 B DT 15 1_555 C DA 20 1_555 B DT 16 1_555 C DA 19 1_555 -0.232 -0.337 3.328 1.615 -3.256 43.522 -0.135 0.470 3.333 -4.382 -2.173 43.666 9 BB_DT12DT13:DA16DA17_CC B 12 ? C 17 ? B 13 ? C 16 ? 1 B DT 16 1_555 C DA 19 1_555 B DT 17 1_555 C DA 18 1_555 -0.146 -0.565 3.193 2.251 0.778 32.987 -1.121 0.626 3.162 1.367 -3.958 33.070 10 BB_DT13DT14:DA15DA16_CC B 13 ? C 16 ? B 14 ? C 15 ? 1 B DT 17 1_555 C DA 18 1_555 B DC 18 1_555 C DG 17 1_555 0.834 0.515 3.477 3.066 4.454 41.051 0.213 -0.825 3.562 6.318 -4.350 41.390 11 BB_DT14DC15:DG14DA15_CC B 14 ? C 15 ? B 15 ? C 14 ? 1 B DC 18 1_555 C DG 17 1_555 B DA 19 1_555 C DT 16 1_555 0.056 1.167 2.917 -0.960 2.054 30.084 1.864 -0.284 2.985 3.951 1.846 30.167 12 BB_DC15DA16:DT13DG14_CC B 15 ? C 14 ? B 16 ? C 13 ? 1 B DA 19 1_555 C DT 16 1_555 B DT 20 1_555 C DA 15 1_555 -0.413 -0.629 3.192 2.666 3.304 31.051 -1.764 1.247 3.065 6.136 -4.950 31.333 13 BB_DA16DT17:DA12DT13_CC B 16 ? C 13 ? B 17 ? C 12 ? 1 B DT 20 1_555 C DA 15 1_555 B DA 21 1_555 C DT 14 1_555 0.548 0.740 3.580 -4.163 1.175 43.790 0.867 -1.160 3.534 1.571 5.566 43.993 14 BB_DT17DA18:DT11DA12_CC B 17 ? C 12 ? B 18 ? C 11 ? 1 B DA 21 1_555 C DT 14 1_555 B DC 22 1_555 C DG 13 1_555 -0.812 -0.738 3.390 -2.088 -2.361 33.961 -0.865 1.035 3.475 -4.031 3.565 34.102 15 BB_DA18DC19:DG10DT11_CC B 18 ? C 11 ? B 19 ? C 10 ? 1 B DC 22 1_555 C DG 13 1_555 B DT 23 1_555 C DA 12 1_555 0.089 -0.027 3.379 -1.385 -0.526 32.595 0.046 -0.407 3.373 -0.936 2.467 32.628 16 BB_DC19DT20:DA9DG10_CC B 19 ? C 10 ? B 20 ? C 9 ? 1 B DT 23 1_555 C DA 12 1_555 B DG 24 1_555 C DC 11 1_555 0.462 0.715 3.125 1.550 2.695 30.269 0.840 -0.580 3.195 5.143 -2.959 30.425 17 BB_DT20DG21:DC8DA9_CC B 20 ? C 9 ? B 21 ? C 8 ? 1 B DG 24 1_555 C DC 11 1_555 B DA 25 1_555 C DT 10 1_555 -0.534 -0.150 3.201 -1.645 -2.992 35.019 0.191 0.643 3.224 -4.958 2.726 35.179 18 BB_DG21DA22:DT7DC8_CC B 21 ? C 8 ? B 22 ? C 7 ? 1 B DA 25 1_555 C DT 10 1_555 B DA 26 1_555 C DT 9 1_555 -0.010 -0.303 3.018 -3.667 -6.160 43.204 0.140 -0.311 3.022 -8.298 4.940 43.767 19 BB_DA22DA23:DT6DT7_CC B 22 ? C 7 ? B 23 ? C 6 ? 1 B DA 26 1_555 C DT 9 1_555 B DA 27 1_555 C DT 8 1_555 0.780 -0.904 2.901 -1.653 -1.060 35.849 -1.332 -1.474 2.888 -1.720 2.683 35.901 20 BB_DA23DA24:DT5DT6_CC B 23 ? C 6 ? B 24 ? C 5 ? 1 B DA 27 1_555 C DT 8 1_555 B DT 28 1_555 C DA 7 1_555 -0.366 -0.776 3.769 3.061 -14.432 34.337 1.080 1.058 3.742 -23.166 -4.913 37.285 21 BB_DA24DT25:DA4DT5_CC B 24 ? C 5 ? B 25 ? C 4 ? 1 B DT 28 1_555 C DA 7 1_555 B DC 29 1_555 C DG 6 1_555 1.038 -0.374 3.317 8.897 -10.781 45.192 0.467 -0.527 3.450 -13.649 -11.263 47.196 22 BB_DT25DC26:DG3DA4_CC B 25 ? C 4 ? B 26 ? C 3 ? # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 3VWB _pdbx_initial_refinement_model.details ? # _atom_sites.entry_id 3W2A _atom_sites.fract_transf_matrix[1][1] 0.005672 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.001604 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.025108 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.014140 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O P SE # loop_