HEADER OXIDOREDUCTASE 28-NOV-12 3W2E TITLE CRYSTAL STRUCTURE OF OXIDATION INTERMEDIATE (20 MIN) OF NADH- TITLE 2 CYTOCHROME B5 REDUCTASE FROM PIG LIVER COMPND MOL_ID: 1; COMPND 2 MOLECULE: NADH-CYTOCHROME B5 REDUCTASE 3; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: B5R, CYTOCHROME B5 REDUCTASE, DIAPHORASE-1; COMPND 5 EC: 1.6.2.2; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SUS SCROFA; SOURCE 3 ORGANISM_COMMON: PIG; SOURCE 4 ORGANISM_TAXID: 9823; SOURCE 5 GENE: CYB5R3, DIA1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID KEYWDS REDUCTASE, CYTOCHROME B5, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR M.YAMADA,T.TAMADA,F.MATSUMOTO,Y.SHOYAMA,S.KIMURA,R.KUROKI,K.MIKI REVDAT 3 20-MAR-24 3W2E 1 REMARK REVDAT 2 30-APR-14 3W2E 1 JRNL REVDAT 1 17-JUL-13 3W2E 0 JRNL AUTH M.YAMADA,T.TAMADA,K.TAKEDA,F.MATSUMOTO,H.OHNO,M.KOSUGI, JRNL AUTH 2 K.TAKABA,Y.SHOYAMA,S.KIMURA,R.KUROKI,K.MIKI JRNL TITL ELUCIDATIONS OF THE CATALYTIC CYCLE OF NADH-CYTOCHROME B5 JRNL TITL 2 REDUCTASE BY X-RAY CRYSTALLOGRAPHY: NEW INSIGHTS INTO JRNL TITL 3 REGULATION OF EFFICIENT ELECTRON TRANSFER JRNL REF J.MOL.BIOL. V. 425 4295 2013 JRNL REFN ISSN 0022-2836 JRNL PMID 23831226 JRNL DOI 10.1016/J.JMB.2013.06.010 REMARK 2 REMARK 2 RESOLUTION. 2.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.8_1069) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 36.55 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.4 REMARK 3 NUMBER OF REFLECTIONS : 21434 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.179 REMARK 3 R VALUE (WORKING SET) : 0.175 REMARK 3 FREE R VALUE : 0.213 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 9.330 REMARK 3 FREE R VALUE TEST SET COUNT : 2000 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 36.5525 - 5.0541 0.99 1505 155 0.1934 0.2526 REMARK 3 2 5.0541 - 4.0132 0.99 1436 147 0.1514 0.1617 REMARK 3 3 4.0132 - 3.5064 0.99 1410 145 0.1568 0.1873 REMARK 3 4 3.5064 - 3.1860 0.99 1407 146 0.1723 0.2050 REMARK 3 5 3.1860 - 2.9577 0.99 1394 144 0.1799 0.2242 REMARK 3 6 2.9577 - 2.7834 0.99 1387 142 0.1796 0.2218 REMARK 3 7 2.7834 - 2.6440 0.98 1370 141 0.1852 0.2310 REMARK 3 8 2.6440 - 2.5290 0.99 1370 140 0.1798 0.2108 REMARK 3 9 2.5290 - 2.4316 0.98 1380 143 0.1850 0.2598 REMARK 3 10 2.4316 - 2.3477 0.98 1351 139 0.1891 0.2309 REMARK 3 11 2.3477 - 2.2744 0.98 1370 141 0.1922 0.2201 REMARK 3 12 2.2744 - 2.2093 0.98 1354 139 0.1885 0.2487 REMARK 3 13 2.2093 - 2.1512 0.98 1339 138 0.1917 0.2514 REMARK 3 14 2.1512 - 2.0987 0.96 1361 140 0.2006 0.2481 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.190 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 20.380 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 26.99 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 2330 REMARK 3 ANGLE : 1.236 3181 REMARK 3 CHIRALITY : 0.076 342 REMARK 3 PLANARITY : 0.006 402 REMARK 3 DIHEDRAL : 18.138 892 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 2 THROUGH 34 ) REMARK 3 ORIGIN FOR THE GROUP (A): -26.4594 8.6813 -10.3245 REMARK 3 T TENSOR REMARK 3 T11: 0.2101 T22: 0.2860 REMARK 3 T33: 0.1458 T12: 0.0924 REMARK 3 T13: 0.0522 T23: 0.0100 REMARK 3 L TENSOR REMARK 3 L11: 1.6393 L22: 4.1592 REMARK 3 L33: 1.5199 L12: -0.8338 REMARK 3 L13: -0.4108 L23: -0.2669 REMARK 3 S TENSOR REMARK 3 S11: 0.3875 S12: 0.2247 S13: 0.2636 REMARK 3 S21: -1.1928 S22: -0.4435 S23: 0.0818 REMARK 3 S31: 0.2693 S32: -0.4438 S33: 0.0852 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 35 THROUGH 82 ) REMARK 3 ORIGIN FOR THE GROUP (A): -22.7021 10.0919 -8.4668 REMARK 3 T TENSOR REMARK 3 T11: 0.0955 T22: 0.1577 REMARK 3 T33: 0.1593 T12: 0.0760 REMARK 3 T13: 0.0280 T23: 0.0570 REMARK 3 L TENSOR REMARK 3 L11: 1.6936 L22: 2.0534 REMARK 3 L33: 2.1668 L12: 0.1322 REMARK 3 L13: 0.1550 L23: 0.2472 REMARK 3 S TENSOR REMARK 3 S11: 0.1991 S12: 0.1660 S13: 0.2511 REMARK 3 S21: -0.4573 S22: -0.2057 S23: 0.1006 REMARK 3 S31: 0.2288 S32: -0.6618 S33: -0.0127 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 83 THROUGH 109 ) REMARK 3 ORIGIN FOR THE GROUP (A): -24.2387 -7.9683 -5.5374 REMARK 3 T TENSOR REMARK 3 T11: 0.3848 T22: 0.2085 REMARK 3 T33: 0.2550 T12: -0.1482 REMARK 3 T13: 0.0754 T23: 0.0152 REMARK 3 L TENSOR REMARK 3 L11: 1.6397 L22: 3.3277 REMARK 3 L33: 2.5259 L12: 0.2528 REMARK 3 L13: -0.4423 L23: -0.1279 REMARK 3 S TENSOR REMARK 3 S11: -0.2746 S12: -0.1561 S13: -0.6382 REMARK 3 S21: -0.0121 S22: -0.0656 S23: 0.2630 REMARK 3 S31: 0.9158 S32: -0.1553 S33: -0.0370 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 110 THROUGH 144 ) REMARK 3 ORIGIN FOR THE GROUP (A): -8.3858 16.2889 -9.1773 REMARK 3 T TENSOR REMARK 3 T11: 0.0743 T22: 0.1940 REMARK 3 T33: 0.2061 T12: -0.0254 REMARK 3 T13: 0.0383 T23: 0.0096 REMARK 3 L TENSOR REMARK 3 L11: 0.7586 L22: 0.8546 REMARK 3 L33: 0.6912 L12: 0.0132 REMARK 3 L13: 0.2335 L23: 0.7419 REMARK 3 S TENSOR REMARK 3 S11: 0.0681 S12: -0.3394 S13: -0.0599 REMARK 3 S21: 0.0157 S22: 0.0319 S23: -0.2116 REMARK 3 S31: -0.2973 S32: 0.0991 S33: -0.0174 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 145 THROUGH 199 ) REMARK 3 ORIGIN FOR THE GROUP (A): -11.8206 5.1391 -24.0963 REMARK 3 T TENSOR REMARK 3 T11: 0.2123 T22: 0.1545 REMARK 3 T33: 0.0893 T12: -0.0025 REMARK 3 T13: 0.0051 T23: 0.0184 REMARK 3 L TENSOR REMARK 3 L11: 1.3054 L22: 2.2021 REMARK 3 L33: 1.4483 L12: -0.1174 REMARK 3 L13: -0.6900 L23: 0.3490 REMARK 3 S TENSOR REMARK 3 S11: -0.1233 S12: 0.1347 S13: 0.0259 REMARK 3 S21: -0.4854 S22: 0.1456 S23: -0.0282 REMARK 3 S31: 0.1036 S32: -0.0045 S33: 0.0031 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 200 THROUGH 272 ) REMARK 3 ORIGIN FOR THE GROUP (A): -0.8757 -0.4874 -21.4157 REMARK 3 T TENSOR REMARK 3 T11: 0.2205 T22: 0.2425 REMARK 3 T33: 0.2431 T12: 0.1204 REMARK 3 T13: 0.0530 T23: -0.0953 REMARK 3 L TENSOR REMARK 3 L11: 1.7914 L22: 2.1027 REMARK 3 L33: 1.4925 L12: -0.4001 REMARK 3 L13: -0.0171 L23: -0.2621 REMARK 3 S TENSOR REMARK 3 S11: -0.3179 S12: 0.0048 S13: -0.1365 REMARK 3 S21: -0.3667 S22: 0.4767 S23: -0.7192 REMARK 3 S31: 0.3531 S32: 0.5572 S33: -0.0395 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3W2E COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 29-NOV-12. REMARK 100 THE DEPOSITION ID IS D_1000095799. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 07-JUL-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SPRING-8 REMARK 200 BEAMLINE : BL38B1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9 REMARK 200 MONOCHROMATOR : SI (111) DOUBLE CRYSTAL REMARK 200 MONOCHROMATOR REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 21466 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.100 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.4 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.14 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.1 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX 1.8_1069 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 57.99 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.93 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 70%(V/V) MPD, 0.1M HEPES-NAOH PH 6.5, REMARK 280 25MM NADH, 1MM DTT, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE REMARK 280 293.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 28.85200 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 42.74650 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 36.54700 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 42.74650 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 28.85200 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 36.54700 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O THR A 142 O HOH A 509 1.94 REMARK 500 O HOH A 530 O HOH A 531 2.02 REMARK 500 O3B FAD A 301 O HOH A 528 2.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 25 -159.58 -163.14 REMARK 500 THR A 88 -55.88 -128.81 REMARK 500 HIS A 200 46.26 -143.02 REMARK 500 TYR A 219 -152.36 -108.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FAD A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NAD A 302 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1NDH RELATED DB: PDB REMARK 900 RELATED ID: 3W2F RELATED DB: PDB REMARK 900 RELATED ID: 3W2G RELATED DB: PDB REMARK 900 RELATED ID: 3W2H RELATED DB: PDB REMARK 900 RELATED ID: 3W2I RELATED DB: PDB REMARK 900 RELATED ID: 3W5H RELATED DB: PDB DBREF 3W2E A 2 272 UNP P83686 NB5R3_PIG 2 272 SEQRES 1 A 271 THR PRO ALA ILE THR LEU GLU ASN PRO ASP ILE LYS TYR SEQRES 2 A 271 PRO LEU ARG LEU ILE ASP LYS GLU VAL VAL ASN HIS ASP SEQRES 3 A 271 THR ARG ARG PHE ARG PHE ALA LEU PRO SER PRO GLU HIS SEQRES 4 A 271 ILE LEU GLY LEU PRO VAL GLY GLN HIS ILE TYR LEU SER SEQRES 5 A 271 ALA ARG ILE ASP GLY ASN LEU VAL ILE ARG PRO TYR THR SEQRES 6 A 271 PRO VAL SER SER ASP ASP ASP LYS GLY PHE VAL ASP LEU SEQRES 7 A 271 VAL ILE LYS VAL TYR PHE LYS ASP THR HIS PRO LYS PHE SEQRES 8 A 271 PRO ALA GLY GLY LYS MET SER GLN TYR LEU GLU SER MET SEQRES 9 A 271 LYS ILE GLY ASP THR ILE GLU PHE ARG GLY PRO ASN GLY SEQRES 10 A 271 LEU LEU VAL TYR GLN GLY LYS GLY LYS PHE ALA ILE ARG SEQRES 11 A 271 PRO ASP LYS LYS SER SER PRO VAL ILE LYS THR VAL LYS SEQRES 12 A 271 SER VAL GLY MET ILE ALA GLY GLY THR GLY ILE THR PRO SEQRES 13 A 271 MET LEU GLN VAL ILE ARG ALA ILE MET LYS ASP PRO ASP SEQRES 14 A 271 ASP HIS THR VAL CYS HIS LEU LEU PHE ALA ASN GLN THR SEQRES 15 A 271 GLU LYS ASP ILE LEU LEU ARG PRO GLU LEU GLU GLU LEU SEQRES 16 A 271 ARG ASN GLU HIS SER ALA ARG PHE LYS LEU TRP TYR THR SEQRES 17 A 271 VAL ASP ARG ALA PRO GLU ALA TRP ASP TYR SER GLN GLY SEQRES 18 A 271 PHE VAL ASN GLU GLU MET ILE ARG ASP HIS LEU PRO PRO SEQRES 19 A 271 PRO GLU GLU GLU PRO LEU VAL LEU MET CYS GLY PRO PRO SEQRES 20 A 271 PRO MET ILE GLN TYR ALA CYS LEU PRO ASN LEU GLU ARG SEQRES 21 A 271 VAL GLY HIS PRO LYS GLU ARG CYS PHE ALA PHE HET FAD A 301 53 HET NAD A 302 44 HETNAM FAD FLAVIN-ADENINE DINUCLEOTIDE HETNAM NAD NICOTINAMIDE-ADENINE-DINUCLEOTIDE FORMUL 2 FAD C27 H33 N9 O15 P2 FORMUL 3 NAD C21 H27 N7 O14 P2 FORMUL 4 HOH *140(H2 O) HELIX 1 1 GLY A 96 MET A 105 1 10 HELIX 2 2 GLY A 154 ASP A 168 1 15 HELIX 3 3 LYS A 185 ILE A 187 5 3 HELIX 4 4 LEU A 189 HIS A 200 1 12 HELIX 5 5 ASN A 225 LEU A 233 1 9 HELIX 6 6 PRO A 235 GLU A 239 5 5 HELIX 7 7 PRO A 247 ALA A 254 1 8 HELIX 8 8 CYS A 255 GLY A 263 1 9 HELIX 9 9 PRO A 265 GLU A 267 5 3 SHEET 1 A 6 ASN A 59 TYR A 65 0 SHEET 2 A 6 HIS A 49 ILE A 56 -1 N LEU A 52 O ARG A 63 SHEET 3 A 6 THR A 110 ASN A 117 -1 O ASN A 117 N HIS A 49 SHEET 4 A 6 TYR A 14 VAL A 23 -1 N TYR A 14 O PHE A 113 SHEET 5 A 6 THR A 28 ALA A 34 -1 O ARG A 32 N ASP A 20 SHEET 6 A 6 PHE A 76 LYS A 82 -1 O ILE A 81 N ARG A 29 SHEET 1 B 3 LEU A 120 GLY A 124 0 SHEET 2 B 3 LYS A 127 ILE A 130 -1 O ALA A 129 N VAL A 121 SHEET 3 B 3 VAL A 139 THR A 142 -1 O LYS A 141 N PHE A 128 SHEET 1 C 6 SER A 220 GLN A 221 0 SHEET 2 C 6 PHE A 204 ARG A 212 1 N TYR A 208 O SER A 220 SHEET 3 C 6 VAL A 174 THR A 183 1 N CYS A 175 O LYS A 205 SHEET 4 C 6 SER A 145 GLY A 151 1 N ALA A 150 O ALA A 180 SHEET 5 C 6 LEU A 241 CYS A 245 1 O LEU A 243 N GLY A 147 SHEET 6 C 6 CYS A 269 ALA A 271 1 O PHE A 270 N VAL A 242 CISPEP 1 GLY A 115 PRO A 116 0 -3.79 SITE 1 AC1 26 HIS A 49 ARG A 63 PRO A 64 TYR A 65 SITE 2 AC1 26 THR A 66 VAL A 80 ILE A 81 LYS A 82 SITE 3 AC1 26 TYR A 84 PHE A 85 HIS A 89 PHE A 92 SITE 4 AC1 26 GLY A 95 GLY A 96 LYS A 97 MET A 98 SITE 5 AC1 26 SER A 99 THR A 153 THR A 156 NAD A 302 SITE 6 AC1 26 HOH A 413 HOH A 433 HOH A 451 HOH A 480 SITE 7 AC1 26 HOH A 501 HOH A 528 SITE 1 AC2 25 LYS A 82 TYR A 84 GLY A 152 THR A 153 SITE 2 AC2 25 GLY A 154 ALA A 180 ASN A 181 GLN A 182 SITE 3 AC2 25 ASP A 211 PHE A 223 CYS A 245 GLY A 246 SITE 4 AC2 25 PRO A 247 PRO A 248 PRO A 249 MET A 250 SITE 5 AC2 25 PHE A 272 FAD A 301 HOH A 415 HOH A 416 SITE 6 AC2 25 HOH A 479 HOH A 480 HOH A 494 HOH A 497 SITE 7 AC2 25 HOH A 499 CRYST1 57.704 73.094 85.493 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017330 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013681 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011697 0.00000