HEADER HYDROLASE, CARBOHYDRATE 13-DEC-12 3W37 TITLE SUGAR BEET ALPHA-GLUCOSIDASE WITH ACARBOSE COMPND MOL_ID: 1; COMPND 2 MOLECULE: ALPHA-GLUCOSIDASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: MALTASE; COMPND 5 EC: 3.2.1.20 SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BETA VULGARIS; SOURCE 3 ORGANISM_COMMON: BEET; SOURCE 4 ORGANISM_TAXID: 161934; SOURCE 5 STRAIN: CV. ABEND; SOURCE 6 OTHER_DETAILS: SEEDS KEYWDS ALPHA-GLUCOSIDASE, GLYCOSIDE HYDROLASE FAMILY 31, (BETA/ALPHA)8- KEYWDS 2 BARREL, ACARBOSE, HYDROLASE, CARBOHYDRATE EXPDTA X-RAY DIFFRACTION AUTHOR T.TAGAMI,K.YAMASHITA,M.OKUYAMA,H.MORI,M.YAO,A.KIMURA REVDAT 6 30-OCT-24 3W37 1 HETSYN REVDAT 5 29-JUL-20 3W37 1 COMPND REMARK HET HETNAM REVDAT 5 2 1 HETSYN FORMUL LINK SITE REVDAT 5 3 1 ATOM REVDAT 4 30-JUL-14 3W37 1 REMARK REVDAT 3 17-JUL-13 3W37 1 JRNL REVDAT 2 12-JUN-13 3W37 1 JRNL REVDAT 1 29-MAY-13 3W37 0 JRNL AUTH T.TAGAMI,K.YAMASHITA,M.OKUYAMA,H.MORI,M.YAO,A.KIMURA JRNL TITL MOLECULAR BASIS FOR THE RECOGNITION OF LONG-CHAIN SUBSTRATES JRNL TITL 2 BY PLANT & ALPHA-GLUCOSIDASE JRNL REF J.BIOL.CHEM. V. 288 19296 2013 JRNL REFN ISSN 0021-9258 JRNL PMID 23687304 JRNL DOI 10.1074/JBC.M113.465211 REMARK 2 REMARK 2 RESOLUTION. 1.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.7.2_860 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 39.53 REMARK 3 MIN(FOBS/SIGMA_FOBS) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 102021 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.154 REMARK 3 R VALUE (WORKING SET) : 0.154 REMARK 3 FREE R VALUE : 0.182 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 2.040 REMARK 3 FREE R VALUE TEST SET COUNT : 2086 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 39.5381 - 4.1910 0.99 6982 144 0.1495 0.1571 REMARK 3 2 4.1910 - 3.3271 1.00 6771 142 0.1391 0.1606 REMARK 3 3 3.3271 - 2.9067 1.00 6718 140 0.1543 0.1992 REMARK 3 4 2.9067 - 2.6410 1.00 6695 140 0.1540 0.1710 REMARK 3 5 2.6410 - 2.4517 1.00 6666 140 0.1488 0.1693 REMARK 3 6 2.4517 - 2.3072 1.00 6667 139 0.1510 0.2050 REMARK 3 7 2.3072 - 2.1916 1.00 6640 138 0.1497 0.1750 REMARK 3 8 2.1916 - 2.0962 1.00 6598 139 0.1488 0.1786 REMARK 3 9 2.0962 - 2.0155 1.00 6637 138 0.1494 0.1809 REMARK 3 10 2.0155 - 1.9460 1.00 6619 138 0.1514 0.1820 REMARK 3 11 1.9460 - 1.8851 1.00 6595 138 0.1540 0.2042 REMARK 3 12 1.8851 - 1.8313 1.00 6599 138 0.1698 0.2076 REMARK 3 13 1.8313 - 1.7831 1.00 6594 138 0.1840 0.2194 REMARK 3 14 1.7831 - 1.7396 1.00 6607 138 0.2022 0.2730 REMARK 3 15 1.7396 - 1.7000 1.00 6547 136 0.2135 0.2401 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.86 REMARK 3 K_SOL : 0.34 REMARK 3 B_SOL : 43.10 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.350 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 15.820 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 26.15 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 23.08 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.71890 REMARK 3 B22 (A**2) : -0.53350 REMARK 3 B33 (A**2) : -0.18550 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 7162 REMARK 3 ANGLE : 1.228 9789 REMARK 3 CHIRALITY : 0.089 1074 REMARK 3 PLANARITY : 0.006 1262 REMARK 3 DIHEDRAL : 15.137 2642 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN A AND (RESSEQ 39:333) REMARK 3 ORIGIN FOR THE GROUP (A): 30.4463 -9.2769 -23.6596 REMARK 3 T TENSOR REMARK 3 T11: 0.0413 T22: 0.1950 REMARK 3 T33: 0.0853 T12: -0.0266 REMARK 3 T13: 0.0042 T23: -0.0106 REMARK 3 L TENSOR REMARK 3 L11: 0.9334 L22: 0.9765 REMARK 3 L33: 1.3271 L12: 0.2690 REMARK 3 L13: -0.1291 L23: 0.2474 REMARK 3 S TENSOR REMARK 3 S11: -0.0125 S12: -0.0476 S13: -0.0722 REMARK 3 S21: 0.0327 S22: 0.0649 S23: -0.2389 REMARK 3 S31: -0.0746 S32: 0.4882 S33: -0.0288 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN A AND (RESSEQ 334:755) REMARK 3 ORIGIN FOR THE GROUP (A): 4.3651 -15.3469 -26.6935 REMARK 3 T TENSOR REMARK 3 T11: 0.0649 T22: 0.0563 REMARK 3 T33: 0.0991 T12: -0.0091 REMARK 3 T13: 0.0195 T23: 0.0111 REMARK 3 L TENSOR REMARK 3 L11: 0.3466 L22: 0.7175 REMARK 3 L33: 1.0913 L12: 0.0276 REMARK 3 L13: -0.0507 L23: 0.4390 REMARK 3 S TENSOR REMARK 3 S11: -0.0434 S12: -0.0111 S13: -0.0148 REMARK 3 S21: 0.0479 S22: -0.0348 S23: 0.1111 REMARK 3 S31: 0.0438 S32: -0.0689 S33: 0.0468 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN A AND (RESSEQ 756:909) REMARK 3 ORIGIN FOR THE GROUP (A): 11.2854 -39.6820 -46.6217 REMARK 3 T TENSOR REMARK 3 T11: 0.1537 T22: 0.0451 REMARK 3 T33: 0.1145 T12: -0.0336 REMARK 3 T13: 0.0763 T23: -0.0332 REMARK 3 L TENSOR REMARK 3 L11: 1.8787 L22: 1.9759 REMARK 3 L33: 1.5481 L12: -0.0863 REMARK 3 L13: -0.2244 L23: 0.3193 REMARK 3 S TENSOR REMARK 3 S11: -0.1451 S12: 0.0684 S13: -0.2156 REMARK 3 S21: -0.0814 S22: 0.0536 S23: -0.0984 REMARK 3 S31: 0.3203 S32: 0.1506 S33: 0.0621 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3W37 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 24-DEC-12. REMARK 100 THE DEPOSITION ID IS D_1000095828. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 06-JUL-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SPRING-8 REMARK 200 BEAMLINE : BL41XU REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0000 REMARK 200 MONOCHROMATOR : SI (111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX225HE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 102030 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.700 REMARK 200 RESOLUTION RANGE LOW (A) : 43.180 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.10300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.8400 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.79 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.88000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.970 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.31 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.25 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 50MM AMMONIUM SULFATE, 50MM SODIUM REMARK 280 ACETATE BUFFER, 16% PEG MONOMETHYLETHER 2000, 14MM ACARBOSE, PH REMARK 280 4.0, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 43.18000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 54.37500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 49.10000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 54.37500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 43.18000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 49.10000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: BIOLOGICAL UNIT IS THE SAME AS ASYM. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 GLU A 2 REMARK 465 ARG A 3 REMARK 465 SER A 4 REMARK 465 LYS A 5 REMARK 465 LEU A 6 REMARK 465 PRO A 7 REMARK 465 ARG A 8 REMARK 465 TYR A 9 REMARK 465 ILE A 10 REMARK 465 CYS A 11 REMARK 465 ALA A 12 REMARK 465 THR A 13 REMARK 465 LEU A 14 REMARK 465 ALA A 15 REMARK 465 VAL A 16 REMARK 465 VAL A 17 REMARK 465 LEU A 18 REMARK 465 PRO A 19 REMARK 465 LEU A 20 REMARK 465 VAL A 21 REMARK 465 LEU A 22 REMARK 465 CYS A 23 REMARK 465 MET A 24 REMARK 465 VAL A 25 REMARK 465 VAL A 26 REMARK 465 GLU A 27 REMARK 465 GLY A 28 REMARK 465 ALA A 29 REMARK 465 THR A 30 REMARK 465 THR A 31 REMARK 465 SER A 32 REMARK 465 LYS A 33 REMARK 465 ASN A 34 REMARK 465 ASP A 35 REMARK 465 ASN A 36 REMARK 465 GLN A 37 REMARK 465 GLY A 38 REMARK 465 SER A 119 REMARK 465 PRO A 120 REMARK 465 PRO A 121 REMARK 465 PRO A 122 REMARK 465 LEU A 123 REMARK 465 SER A 124 REMARK 465 SER A 125 REMARK 465 LEU A 126 REMARK 465 GLN A 127 REMARK 465 HIS A 128 REMARK 465 LEU A 129 REMARK 465 PRO A 130 REMARK 465 LYS A 131 REMARK 465 PRO A 132 REMARK 465 ILE A 133 REMARK 465 PRO A 134 REMARK 465 GLN A 135 REMARK 465 ASN A 136 REMARK 465 GLN A 137 REMARK 465 GLU A 859 REMARK 465 TYR A 860 REMARK 465 THR A 861 REMARK 465 VAL A 862 REMARK 465 GLN A 863 REMARK 465 LYS A 864 REMARK 465 ASP A 865 REMARK 465 ALA A 866 REMARK 465 GLY A 867 REMARK 465 ALA A 868 REMARK 465 ILE A 869 REMARK 465 LYS A 870 REMARK 465 ILE A 871 REMARK 465 LYS A 872 REMARK 465 GLY A 873 REMARK 465 LEU A 874 REMARK 465 GLY A 875 REMARK 465 LEU A 876 REMARK 465 ARG A 877 REMARK 465 THR A 878 REMARK 465 SER A 879 REMARK 465 SER A 880 REMARK 465 HIS A 881 REMARK 465 ASN A 882 REMARK 465 GLN A 883 REMARK 465 GLY A 884 REMARK 465 GLY A 910 REMARK 465 ALA A 911 REMARK 465 THR A 912 REMARK 465 ARG A 913 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 366 CB - CG - OD2 ANGL. DEV. = 5.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 56 155.09 174.15 REMARK 500 ALA A 176 42.12 -101.32 REMARK 500 ASN A 223 62.17 73.97 REMARK 500 TRP A 229 109.73 -163.15 REMARK 500 ASP A 239 -39.01 78.98 REMARK 500 LEU A 242 -143.04 -109.73 REMARK 500 VAL A 431 -154.01 -143.87 REMARK 500 CYS A 599 -9.30 83.33 REMARK 500 GLU A 603 156.48 77.06 REMARK 500 GLN A 634 29.66 -143.70 REMARK 500 ASN A 728 101.43 -161.81 REMARK 500 SER A 736 -99.47 -87.56 REMARK 500 SER A 736 -101.09 -88.36 REMARK 500 ASN A 832 62.72 60.74 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3W38 RELATED DB: PDB REMARK 900 LIGAND-FREE FORM OF THE SAME PROTEIN REMARK 900 RELATED ID: 3WEL RELATED DB: PDB REMARK 900 THE SAME PROTEIN COMPLEXED WITH ACARVIOSYL-MALTOTRIOSE (AC5) REMARK 900 RELATED ID: 3WEM RELATED DB: PDB REMARK 900 THE SAME PROTEIN COMPLEXED WITH ACARVIOSYL-MALTOTETRAOSE (AC6) REMARK 900 RELATED ID: 3WEN RELATED DB: PDB REMARK 900 THE SAME PROTEIN COMPLEXED WITH ACARVIOSYL-MALTOPENTAOSE (AC7) REMARK 900 RELATED ID: 3WEO RELATED DB: PDB REMARK 900 THE SAME PROTEIN COMPLEXED WITH ACARVIOSYL-MALTOHEXAOSE (AC8) REMARK 999 REMARK 999 SEQUENCE REMARK 999 AUTHORS STATE THAT THE GENEBANK ACCESSION NUMBER IS AB699590 FOR REMARK 999 THIS SEQUENCE. DBREF 3W37 A 1 913 PDB 3W37 3W37 1 913 SEQRES 1 A 913 MET GLU ARG SER LYS LEU PRO ARG TYR ILE CYS ALA THR SEQRES 2 A 913 LEU ALA VAL VAL LEU PRO LEU VAL LEU CYS MET VAL VAL SEQRES 3 A 913 GLU GLY ALA THR THR SER LYS ASN ASP ASN GLN GLY GLU SEQRES 4 A 913 ALA ILE GLY TYR GLY TYR GLN VAL LYS ASN ALA LYS VAL SEQRES 5 A 913 ASP ASN SER THR GLY LYS SER LEU THR ALA LEU LEU GLN SEQRES 6 A 913 LEU ILE ARG ASN SER PRO VAL TYR GLY PRO ASP ILE GLN SEQRES 7 A 913 PHE LEU SER PHE THR ALA SER PHE GLU GLU ASP ASP THR SEQRES 8 A 913 LEU ARG ILE ARG ILE THR ASP ALA ASN ASN ARG ARG TRP SEQRES 9 A 913 GLU ILE PRO ASN GLU VAL LEU PRO ARG PRO PRO PRO PRO SEQRES 10 A 913 PRO SER PRO PRO PRO LEU SER SER LEU GLN HIS LEU PRO SEQRES 11 A 913 LYS PRO ILE PRO GLN ASN GLN PRO THR THR THR VAL LEU SEQRES 12 A 913 SER HIS PRO HIS SER ASP LEU VAL PHE THR LEU PHE HIS SEQRES 13 A 913 THR THR PRO PHE GLY PHE THR ILE TYR ARG LYS SER THR SEQRES 14 A 913 HIS ASP VAL LEU PHE ASP ALA THR PRO ILE PRO SER ASN SEQRES 15 A 913 PRO THR THR PHE LEU ILE TYR LYS ASP GLN TYR LEU GLN SEQRES 16 A 913 LEU SER SER SER LEU PRO ALA GLN GLN ALA HIS LEU TYR SEQRES 17 A 913 GLY LEU GLY GLU HIS THR LYS PRO THR PHE GLN LEU ALA SEQRES 18 A 913 HIS ASN GLN ILE LEU THR LEU TRP ASN ALA ASP ILE ALA SEQRES 19 A 913 SER PHE ASN ARG ASP LEU ASN LEU TYR GLY SER HIS PRO SEQRES 20 A 913 PHE TYR MET ASP VAL ARG SER SER PRO MET VAL GLY SER SEQRES 21 A 913 THR HIS GLY VAL PHE LEU LEU ASN SER ASN GLY MET ASP SEQRES 22 A 913 VAL GLU TYR THR GLY ASP ARG ILE THR TYR LYS VAL ILE SEQRES 23 A 913 GLY GLY ILE ILE ASP LEU TYR ILE PHE ALA GLY ARG THR SEQRES 24 A 913 PRO GLU MET VAL LEU ASP GLN TYR THR LYS LEU ILE GLY SEQRES 25 A 913 ARG PRO ALA PRO MET PRO TYR TRP ALA PHE GLY PHE HIS SEQRES 26 A 913 GLN CYS ARG TRP GLY TYR ARG ASP VAL ASN GLU ILE GLU SEQRES 27 A 913 THR VAL VAL ASP LYS TYR ALA GLU ALA ARG ILE PRO LEU SEQRES 28 A 913 GLU VAL MET TRP THR ASP ILE ASP TYR MET ASP ALA PHE SEQRES 29 A 913 LYS ASP PHE THR LEU ASP PRO VAL HIS PHE PRO LEU ASP SEQRES 30 A 913 LYS MET GLN GLN PHE VAL THR LYS LEU HIS ARG ASN GLY SEQRES 31 A 913 GLN ARG TYR VAL PRO ILE LEU ASP PRO GLY ILE ASN THR SEQRES 32 A 913 ASN LYS SER TYR GLY THR PHE ILE ARG GLY MET GLN SER SEQRES 33 A 913 ASN VAL PHE ILE LYS ARG ASP GLY ASN PRO TYR LEU GLY SEQRES 34 A 913 SER VAL TRP PRO GLY PRO VAL TYR TYR PRO ASP PHE LEU SEQRES 35 A 913 ASP PRO ALA ALA ARG SER PHE TRP VAL ASP GLU ILE LYS SEQRES 36 A 913 ARG PHE ARG ASP ILE LEU PRO ILE ASP GLY ILE TRP ILE SEQRES 37 A 913 ASP MET ASN GLU ALA SER ASN PHE ILE THR SER ALA PRO SEQRES 38 A 913 THR PRO GLY SER THR LEU ASP ASN PRO PRO TYR LYS ILE SEQRES 39 A 913 ASN ASN SER GLY GLY ARG VAL PRO ILE ASN SER LYS THR SEQRES 40 A 913 ILE PRO ALA THR ALA MET HIS TYR GLY ASN VAL THR GLU SEQRES 41 A 913 TYR ASN ALA HIS ASN LEU TYR GLY PHE LEU GLU SER GLN SEQRES 42 A 913 ALA THR ARG GLU ALA LEU VAL ARG THR SER ASN GLU ARG SEQRES 43 A 913 PRO PHE LEU LEU SER ARG SER THR PHE ALA GLY SER GLY SEQRES 44 A 913 LYS TYR THR ALA HIS TRP THR GLY ASP ASN ALA ALA ARG SEQRES 45 A 913 TRP ASP ASP LEU GLN TYR SER ILE PRO THR MET LEU ASN SEQRES 46 A 913 PHE GLY LEU PHE GLY MET PRO MET ILE GLY ALA ASP ILE SEQRES 47 A 913 CYS GLY PHE ALA GLU SER THR THR GLU GLU LEU CYS ARG SEQRES 48 A 913 ARG TRP ILE GLN LEU GLY ALA PHE TYR PRO PHE SER ARG SEQRES 49 A 913 ASP HIS SER ALA ARG ASP THR THR HIS GLN GLU LEU TYR SEQRES 50 A 913 LEU TRP GLU SER VAL ALA ALA SER ALA ARG THR VAL LEU SEQRES 51 A 913 GLY LEU ARG TYR GLN LEU LEU PRO TYR TYR TYR THR LEU SEQRES 52 A 913 MET TYR ASP ALA ASN LEU ARG GLY ILE PRO ILE ALA ARG SEQRES 53 A 913 PRO LEU PHE PHE THR PHE PRO ASP ASP VAL ALA THR TYR SEQRES 54 A 913 GLY ILE SER SER GLN PHE LEU ILE GLY ARG GLY ILE MET SEQRES 55 A 913 VAL SER PRO VAL LEU GLN PRO GLY ALA VAL SER VAL ASN SEQRES 56 A 913 ALA TYR PHE PRO ARG GLY ASN TRP PHE SER LEU PHE ASN SEQRES 57 A 913 TYR THR SER SER VAL SER VAL SER ALA GLY THR TYR VAL SEQRES 58 A 913 SER LEU SER ALA PRO PRO ASP HIS ILE ASN VAL HIS ILE SEQRES 59 A 913 HIS GLU GLY ASN ILE VAL ALA MET GLN GLY GLU ALA MET SEQRES 60 A 913 THR THR GLN ALA ALA ARG SER THR PRO PHE HIS LEU LEU SEQRES 61 A 913 VAL VAL MET SER ASP HIS VAL ALA SER THR GLY GLU LEU SEQRES 62 A 913 PHE LEU ASP ASN GLY ILE GLU MET ASP ILE GLY GLY PRO SEQRES 63 A 913 GLY GLY LYS TRP THR LEU VAL ARG PHE PHE ALA GLU SER SEQRES 64 A 913 GLY ILE ASN ASN LEU THR ILE SER SER GLU VAL VAL ASN SEQRES 65 A 913 ARG GLY TYR ALA MET SER GLN ARG TRP VAL MET ASP LYS SEQRES 66 A 913 ILE THR ILE LEU GLY LEU LYS ARG ARG VAL ARG ILE LYS SEQRES 67 A 913 GLU TYR THR VAL GLN LYS ASP ALA GLY ALA ILE LYS ILE SEQRES 68 A 913 LYS GLY LEU GLY LEU ARG THR SER SER HIS ASN GLN GLY SEQRES 69 A 913 GLY PHE VAL VAL SER VAL ILE SER ASP LEU ARG GLN LEU SEQRES 70 A 913 VAL GLY GLN ALA PHE LYS LEU GLU LEU GLU PHE GLU GLY SEQRES 71 A 913 ALA THR ARG MODRES 3W37 ASN A 823 ASN GLYCOSYLATION SITE MODRES 3W37 ASN A 404 ASN GLYCOSYLATION SITE MODRES 3W37 ASN A 728 ASN GLYCOSYLATION SITE HET NAG B 1 14 HET NAG B 2 14 HET NAG C 1 14 HET FUC C 2 10 HET NAG C 3 14 HET GLC D 1 12 HET GLC D 2 11 HET AC1 D 3 21 HET ACY A1007 4 HET GOL A1008 6 HET ACY A1009 4 HET SO4 A1010 5 HET GOL A1011 6 HET NAG A1012 14 HET ACY A1013 4 HET GOL A1014 6 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM FUC ALPHA-L-FUCOPYRANOSE HETNAM GLC ALPHA-D-GLUCOPYRANOSE HETNAM AC1 4,6-DIDEOXY-4-{[(1S,4R,5S,6S)-4,5,6-TRIHYDROXY-3- HETNAM 2 AC1 (HYDROXYMETHYL)CYCLOHEX-2-EN-1-YL]AMINO}-ALPHA-D- HETNAM 3 AC1 GLUCOPYRANOSE HETNAM ACY ACETIC ACID HETNAM GOL GLYCEROL HETNAM SO4 SULFATE ION HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN FUC ALPHA-L-FUCOSE; 6-DEOXY-ALPHA-L-GALACTOPYRANOSE; L- HETSYN 2 FUC FUCOSE; FUCOSE HETSYN GLC ALPHA-D-GLUCOSE; D-GLUCOSE; GLUCOSE HETSYN AC1 6-METHYL-5-(4,5,6-TRIHYDROXY-3-HYDROXYMETHYL-CYCLOHEX- HETSYN 2 AC1 2-ENYLAMINO)-TETRAHYDRO-PYRAN-2,3,4-TRIOL; 4,6- HETSYN 3 AC1 DIDEOXY-4-{[(1S,4R,5S,6S)-4,5,6-TRIHYDROXY-3- HETSYN 4 AC1 (HYDROXYMETHYL)CYCLOHEX-2-EN-1-YL]AMINO}-ALPHA-D- HETSYN 5 AC1 GLUCOSE; 4,6-DIDEOXY-4-{[(1S,4R,5S,6S)-4,5,6- HETSYN 6 AC1 TRIHYDROXY-3-(HYDROXYMETHYL)CYCLOHEX-2-EN-1-YL]AMINO}- HETSYN 7 AC1 D-GLUCOSE; 4,6-DIDEOXY-4-{[(1S,4R,5S,6S)-4,5,6- HETSYN 8 AC1 TRIHYDROXY-3-(HYDROXYMETHYL)CYCLOHEX-2-EN-1-YL]AMINO}- HETSYN 9 AC1 GLUCOSE HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 NAG 5(C8 H15 N O6) FORMUL 3 FUC C6 H12 O5 FORMUL 4 GLC 2(C6 H12 O6) FORMUL 4 AC1 C13 H23 N O8 FORMUL 5 ACY 3(C2 H4 O2) FORMUL 6 GOL 3(C3 H8 O3) FORMUL 8 SO4 O4 S 2- FORMUL 13 HOH *739(H2 O) HELIX 1 1 PRO A 183 THR A 185 1 3 HELIX 2 2 PRO A 300 ILE A 311 1 12 HELIX 3 3 TYR A 319 PHE A 322 1 4 HELIX 4 4 VAL A 334 GLU A 346 1 13 HELIX 5 5 ILE A 358 TYR A 360 1 3 HELIX 6 6 LEU A 376 ARG A 388 1 13 HELIX 7 7 GLY A 408 GLN A 415 1 8 HELIX 8 8 PRO A 444 ILE A 460 1 17 HELIX 9 9 ASN A 496 GLY A 498 1 3 HELIX 10 10 GLU A 520 THR A 542 1 23 HELIX 11 11 SER A 558 LYS A 560 1 3 HELIX 12 12 TRP A 573 LEU A 588 1 16 HELIX 13 13 GLU A 607 GLY A 617 1 11 HELIX 14 14 GLU A 640 GLN A 655 1 16 HELIX 15 15 LEU A 657 ARG A 670 1 14 HELIX 16 16 LEU A 678 THR A 681 1 4 HELIX 17 17 VAL A 686 THR A 688 1 3 HELIX 18 18 THR A 769 ALA A 772 1 4 HELIX 19 19 ARG A 833 SER A 838 1 6 SHEET 1 1 1 TYR A 45 VAL A 52 0 SHEET 1 2 1 SER A 59 LEU A 66 0 SHEET 1 3 1 PHE A 79 GLU A 88 0 SHEET 1 4 1 THR A 91 ASP A 98 0 SHEET 1 5 1 THR A 140 LEU A 143 0 SHEET 1 6 1 LEU A 150 PHE A 155 0 SHEET 1 7 1 GLY A 161 ARG A 166 0 SHEET 1 8 1 VAL A 172 ASP A 175 0 SHEET 1 9 1 ILE A 188 LYS A 190 0 SHEET 1 10 1 TYR A 193 SER A 199 0 SHEET 1 11 1 ALA A 205 GLY A 211 0 SHEET 1 12 1 GLN A 224 LEU A 228 0 SHEET 1 13 1 HIS A 246 ARG A 253 0 SHEET 1 14 1 SER A 260 LEU A 266 0 SHEET 1 15 1 MET A 272 TYR A 276 0 SHEET 1 16 1 ARG A 280 VAL A 285 0 SHEET 1 17 1 ILE A 290 PHE A 295 0 SHEET 1 18 1 HIS A 325 GLN A 326 0 SHEET 1 19 1 VAL A 353 THR A 356 0 SHEET 1 20 1 ARG A 392 LEU A 397 0 SHEET 1 21 1 ILE A 401 ASN A 402 0 SHEET 1 22 1 LYS A 421 ARG A 422 0 SHEET 1 23 1 ASN A 425 PRO A 426 0 SHEET 1 24 1 GLY A 429 VAL A 431 0 SHEET 1 25 1 GLY A 434 TYR A 437 0 SHEET 1 26 1 ILE A 466 ILE A 468 0 SHEET 1 27 1 MET A 513 HIS A 514 0 SHEET 1 28 1 VAL A 518 THR A 519 0 SHEET 1 29 1 LEU A 549 SER A 551 0 SHEET 1 30 1 ALA A 563 TRP A 565 0 SHEET 1 31 1 ILE A 594 GLY A 595 0 SHEET 1 32 1 ASP A 597 ILE A 598 0 SHEET 1 33 1 ARG A 624 ASP A 625 0 SHEET 1 34 1 ALA A 675 ARG A 676 0 SHEET 1 35 1 PHE A 695 ILE A 697 0 SHEET 1 36 1 ILE A 701 SER A 704 0 SHEET 1 37 1 SER A 713 PHE A 718 0 SHEET 1 38 1 GLY A 721 SER A 725 0 SHEET 1 39 1 SER A 732 VAL A 735 0 SHEET 1 40 1 THR A 739 SER A 744 0 SHEET 1 41 1 ASN A 751 HIS A 755 0 SHEET 1 42 1 ASN A 758 MET A 762 0 SHEET 1 43 1 PHE A 777 VAL A 782 0 SHEET 1 44 1 SER A 789 ASP A 796 0 SHEET 1 45 1 TRP A 810 SER A 819 0 SHEET 1 46 1 ASN A 823 VAL A 831 0 SHEET 1 47 1 VAL A 842 LEU A 851 0 SHEET 1 48 1 VAL A 855 ILE A 857 0 SHEET 1 49 1 VAL A 887 LEU A 897 0 SHEET 1 50 1 LYS A 903 PHE A 908 0 SSBOND 1 CYS A 599 CYS A 610 1555 1555 2.09 LINK ND2 ASN A 404 C1 NAG C 1 1555 1555 1.46 LINK ND2 ASN A 728 C1 NAG A1012 1555 1555 1.47 LINK ND2 ASN A 823 C1 NAG B 1 1555 1555 1.44 LINK O4 NAG B 1 C1 NAG B 2 1555 1555 1.45 LINK O3 NAG C 1 C1 FUC C 2 1555 1555 1.44 LINK O4 NAG C 1 C1 NAG C 3 1555 1555 1.45 LINK O4 GLC D 1 C1 GLC D 2 1555 1555 1.42 LINK O4 GLC D 2 C1 AC1 D 3 1555 1555 1.43 CISPEP 1 THR A 158 PRO A 159 0 -5.42 CISPEP 2 GLY A 211 GLU A 212 0 7.01 CISPEP 3 SER A 255 PRO A 256 0 7.02 CISPEP 4 GLY A 297 ARG A 298 0 14.45 CISPEP 5 GLU A 472 ALA A 473 0 5.35 CRYST1 86.360 98.200 108.750 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011579 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010183 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009195 0.00000