HEADER LIGASE/RNA 27-DEC-12 3W3S TITLE CRYSTAL STRUCTURE OF A. AEOLICUS TRNASEC IN COMPLEX WITH M. KANDLERI TITLE 2 SERRS COMPND MOL_ID: 1; COMPND 2 MOLECULE: TYPE-2 SERINE--TRNA LIGASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: SERYL-TRNA SYNTHETASE, SERRS, SERYL-TRNA(SER/SEC) COMPND 5 SYNTHETASE; COMPND 6 EC: 6.1.1.11; COMPND 7 ENGINEERED: YES; COMPND 8 MUTATION: YES; COMPND 9 MOL_ID: 2; COMPND 10 MOLECULE: SELENOCYSTEINE TRNA; COMPND 11 CHAIN: B; COMPND 12 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: METHANOPYRUS KANDLERI; SOURCE 3 ORGANISM_TAXID: 190192; SOURCE 4 STRAIN: AV19; SOURCE 5 GENE: SERS; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: ROSETTA 2(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET26B; SOURCE 11 MOL_ID: 2; SOURCE 12 SYNTHETIC: YES; SOURCE 13 ORGANISM_SCIENTIFIC: AQUIFEX AEOLICUS VF5; SOURCE 14 ORGANISM_TAXID: 224324; SOURCE 15 OTHER_DETAILS: THE TRNASEC FROM AQUIFEX AEOLICUS VF5 WAS PREPARED BY SOURCE 16 IN VITRO TRANSCRIPTION WITH T7 RNA POLYMERASE. KEYWDS CLASS 2 AMINOACYL-TRNA SYNTHETASE, TRANSFER RNA, AMINOACYLATION, KEYWDS 2 SELENOCYSTEINE INCORPORATION, SELENIUM METABOLISM, LIGASE-RNA KEYWDS 3 COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR Y.ITOH,S.SEKINE,S.YOKOYAMA REVDAT 3 07-AUG-13 3W3S 1 JRNL REVDAT 2 22-MAY-13 3W3S 1 JRNL REVDAT 1 13-FEB-13 3W3S 0 JRNL AUTH Y.ITOH,S.SEKINE,S.SUETSUGU,S.YOKOYAMA JRNL TITL TERTIARY STRUCTURE OF BACTERIAL SELENOCYSTEINE TRNA JRNL REF NUCLEIC ACIDS RES. V. 41 6729 2013 JRNL REFN ISSN 0305-1048 JRNL PMID 23649835 JRNL DOI 10.1093/NAR/GKT321 REMARK 2 REMARK 2 RESOLUTION. 3.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.7.1_743) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VICENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE- REMARK 3 : KUNSTLEVE,LI-WEI HUNG,ROBERT IMMORMINO, REMARK 3 : TOM IOERGER,AIRLIE MCCOY,ERIK MCKEE,NIGEL REMARK 3 : MORIARTY,REETAL PAI,RANDY READ,JANE REMARK 3 : RICHARDSON,DAVID RICHARDSON,TOD ROMO,JIM REMARK 3 : SACCHETTINI,NICHOLAS SAUTER,JACOB SMITH, REMARK 3 : LAURENT STORONI,TOM TERWILLIGER,PETER REMARK 3 : ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 35.82 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.330 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.8 REMARK 3 NUMBER OF REFLECTIONS : 31040 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.206 REMARK 3 R VALUE (WORKING SET) : 0.204 REMARK 3 FREE R VALUE : 0.260 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.010 REMARK 3 FREE R VALUE TEST SET COUNT : 1556 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 35.8250 - 6.8694 0.99 2933 137 0.2108 0.2722 REMARK 3 2 6.8694 - 5.4586 0.99 2746 139 0.1984 0.2453 REMARK 3 3 5.4586 - 4.7704 0.99 2715 172 0.1701 0.2255 REMARK 3 4 4.7704 - 4.3351 0.99 2720 118 0.1619 0.2271 REMARK 3 5 4.3351 - 4.0248 0.97 2635 142 0.1735 0.2337 REMARK 3 6 4.0248 - 3.7878 0.96 2568 158 0.2009 0.2467 REMARK 3 7 3.7878 - 3.5983 0.96 2617 133 0.2158 0.2572 REMARK 3 8 3.5983 - 3.4418 0.95 2590 126 0.2478 0.3134 REMARK 3 9 3.4418 - 3.3094 0.97 2596 152 0.2710 0.3792 REMARK 3 10 3.3094 - 3.1952 0.99 2671 144 0.2762 0.3422 REMARK 3 11 3.1952 - 3.0954 1.00 2693 135 0.3066 0.3209 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.83 REMARK 3 K_SOL : 0.31 REMARK 3 B_SOL : 90.34 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.830 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 25.890 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 102.66 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 128.43 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.009 6871 REMARK 3 ANGLE : 1.253 9799 REMARK 3 CHIRALITY : 0.082 1133 REMARK 3 PLANARITY : 0.007 894 REMARK 3 DIHEDRAL : 16.634 2898 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 10 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN A AND (RESSEQ 1:163) REMARK 3 ORIGIN FOR THE GROUP (A): -37.6726 -6.6932 122.9804 REMARK 3 T TENSOR REMARK 3 T11: 0.5269 T22: 0.5268 REMARK 3 T33: 0.6431 T12: 0.0882 REMARK 3 T13: -0.0308 T23: 0.0035 REMARK 3 L TENSOR REMARK 3 L11: 3.2925 L22: 8.7133 REMARK 3 L33: 4.0522 L12: -0.8926 REMARK 3 L13: -0.9731 L23: 1.6185 REMARK 3 S TENSOR REMARK 3 S11: -0.1098 S12: 0.0570 S13: 0.1475 REMARK 3 S21: 0.5028 S22: 0.1596 S23: -0.1524 REMARK 3 S31: 0.3352 S32: 0.2058 S33: -0.0690 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN A AND (RESSEQ 164:527) REMARK 3 ORIGIN FOR THE GROUP (A): -57.4640 36.4384 106.9978 REMARK 3 T TENSOR REMARK 3 T11: 0.4137 T22: 0.6520 REMARK 3 T33: 0.8353 T12: -0.0608 REMARK 3 T13: -0.1154 T23: -0.0275 REMARK 3 L TENSOR REMARK 3 L11: 3.4684 L22: 2.0961 REMARK 3 L33: 1.9735 L12: 0.2985 REMARK 3 L13: -0.1945 L23: -0.2129 REMARK 3 S TENSOR REMARK 3 S11: -0.2998 S12: 0.1007 S13: 0.9133 REMARK 3 S21: 0.0689 S22: 0.1691 S23: -0.4845 REMARK 3 S31: -0.2424 S32: 0.4811 S33: 0.0928 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN B AND (RESSEQ 1:5A) REMARK 3 ORIGIN FOR THE GROUP (A): -63.0994 -22.5304 77.3505 REMARK 3 T TENSOR REMARK 3 T11: 2.2819 T22: 3.5349 REMARK 3 T33: 2.1729 T12: 0.0839 REMARK 3 T13: -0.1830 T23: 0.5789 REMARK 3 L TENSOR REMARK 3 L11: 5.4662 L22: 5.8059 REMARK 3 L33: 7.1675 L12: -0.6451 REMARK 3 L13: 0.1753 L23: 2.9186 REMARK 3 S TENSOR REMARK 3 S11: 0.4792 S12: 2.1962 S13: 0.2278 REMARK 3 S21: -1.8439 S22: -0.0591 S23: 0.7965 REMARK 3 S31: -0.6683 S32: -2.8343 S33: -0.2157 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN B AND (RESSEQ 6:12) REMARK 3 ORIGIN FOR THE GROUP (A): -40.5604 -18.1180 85.2014 REMARK 3 T TENSOR REMARK 3 T11: 1.5880 T22: 1.6422 REMARK 3 T33: 1.3921 T12: 0.2501 REMARK 3 T13: 0.0106 T23: 0.1299 REMARK 3 L TENSOR REMARK 3 L11: 9.0390 L22: 2.8472 REMARK 3 L33: 3.8377 L12: -0.6016 REMARK 3 L13: -3.8028 L23: 2.7667 REMARK 3 S TENSOR REMARK 3 S11: -0.4395 S12: 2.0937 S13: 0.8095 REMARK 3 S21: -1.0907 S22: -0.0232 S23: -0.5916 REMARK 3 S31: 0.7431 S32: 0.3005 S33: -0.0695 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN B AND (RESSEQ 13:31) REMARK 3 ORIGIN FOR THE GROUP (A): -30.4446 -23.9253 90.5483 REMARK 3 T TENSOR REMARK 3 T11: 1.3546 T22: 1.1525 REMARK 3 T33: 1.4186 T12: 0.3197 REMARK 3 T13: -0.1069 T23: -0.1407 REMARK 3 L TENSOR REMARK 3 L11: 6.2572 L22: 1.0257 REMARK 3 L33: 1.5562 L12: 0.2021 REMARK 3 L13: 2.1913 L23: -0.8713 REMARK 3 S TENSOR REMARK 3 S11: 0.8255 S12: 2.2343 S13: -0.1233 REMARK 3 S21: -0.0255 S22: -0.1076 S23: -0.3501 REMARK 3 S31: 0.5502 S32: -0.0693 S33: -0.7458 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN B AND (RESSEQ 32:38) REMARK 3 ORIGIN FOR THE GROUP (A): -5.6784 -20.7263 81.0229 REMARK 3 T TENSOR REMARK 3 T11: 1.5028 T22: 2.2999 REMARK 3 T33: 2.3285 T12: 0.0644 REMARK 3 T13: -0.0754 T23: 0.2693 REMARK 3 L TENSOR REMARK 3 L11: 2.4727 L22: 1.9624 REMARK 3 L33: 4.5263 L12: -2.1790 REMARK 3 L13: 2.9061 L23: -2.6979 REMARK 3 S TENSOR REMARK 3 S11: 0.3105 S12: 2.4014 S13: 1.2413 REMARK 3 S21: -1.2346 S22: -0.5314 S23: -0.8509 REMARK 3 S31: -0.3615 S32: 1.4846 S33: 0.0907 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN B AND (RESSEQ 39:44) REMARK 3 ORIGIN FOR THE GROUP (A): -21.2746 -20.3380 91.4766 REMARK 3 T TENSOR REMARK 3 T11: 1.2407 T22: 1.6453 REMARK 3 T33: 1.7818 T12: 0.0623 REMARK 3 T13: -0.2035 T23: 0.0198 REMARK 3 L TENSOR REMARK 3 L11: 6.0787 L22: 3.2226 REMARK 3 L33: 3.5462 L12: -4.4529 REMARK 3 L13: 4.6467 L23: -3.3940 REMARK 3 S TENSOR REMARK 3 S11: 0.5170 S12: -0.3351 S13: 0.6305 REMARK 3 S21: -0.9330 S22: 0.4090 S23: 0.2249 REMARK 3 S31: -1.4111 S32: -0.1759 S33: -0.5833 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN B AND (RESSEQ 45:50) REMARK 3 ORIGIN FOR THE GROUP (A): -32.5112 -1.2982 101.0850 REMARK 3 T TENSOR REMARK 3 T11: 1.2089 T22: 0.7257 REMARK 3 T33: 1.4098 T12: 0.0283 REMARK 3 T13: 0.0333 T23: -0.0500 REMARK 3 L TENSOR REMARK 3 L11: 3.5205 L22: 1.1749 REMARK 3 L33: 3.5283 L12: 1.9721 REMARK 3 L13: 1.1948 L23: 0.2652 REMARK 3 S TENSOR REMARK 3 S11: -0.2908 S12: 0.4073 S13: 0.2401 REMARK 3 S21: -0.8276 S22: 0.0841 S23: 0.2419 REMARK 3 S31: -0.2719 S32: 0.3349 S33: 0.2156 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN B AND (RESSEQ 51:67) REMARK 3 ORIGIN FOR THE GROUP (A): -53.4752 -21.7345 98.7411 REMARK 3 T TENSOR REMARK 3 T11: 1.5804 T22: 1.3790 REMARK 3 T33: 1.3626 T12: 0.0526 REMARK 3 T13: -0.2444 T23: -0.0664 REMARK 3 L TENSOR REMARK 3 L11: 4.6687 L22: 3.1160 REMARK 3 L33: 5.5987 L12: 1.7423 REMARK 3 L13: -1.4649 L23: -2.2270 REMARK 3 S TENSOR REMARK 3 S11: 0.0668 S12: 0.5762 S13: -0.3365 REMARK 3 S21: -0.9252 S22: 0.2923 S23: 0.5194 REMARK 3 S31: 0.4725 S32: -1.7978 S33: -0.3758 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN B AND (RESSEQ 67A:75) REMARK 3 ORIGIN FOR THE GROUP (A): -62.3271 -20.8181 68.7175 REMARK 3 T TENSOR REMARK 3 T11: 2.0730 T22: 3.7018 REMARK 3 T33: 1.8720 T12: -0.6825 REMARK 3 T13: -0.0899 T23: 0.2772 REMARK 3 L TENSOR REMARK 3 L11: 5.3492 L22: 8.2616 REMARK 3 L33: 4.0393 L12: 1.6736 REMARK 3 L13: 4.6313 L23: 1.9668 REMARK 3 S TENSOR REMARK 3 S11: 0.6213 S12: 2.7014 S13: -0.8757 REMARK 3 S21: -0.2397 S22: 0.3280 S23: 0.9561 REMARK 3 S31: 0.5604 S32: -0.5470 S33: -0.9967 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3W3S COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 09-JAN-13. REMARK 100 THE RCSB ID CODE IS RCSB095849. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 27-NOV-09; 04-NOV-09 REMARK 200 TEMPERATURE (KELVIN) : 90; 90 REMARK 200 PH : 5.6 REMARK 200 NUMBER OF CRYSTALS USED : 2 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y; Y REMARK 200 RADIATION SOURCE : PHOTON FACTORY; PHOTON FACTORY REMARK 200 BEAMLINE : BL-5A; AR-NE3A REMARK 200 X-RAY GENERATOR MODEL : NULL; NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M; M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97848; 1.07186, 1.07227, REMARK 200 1.05404 REMARK 200 MONOCHROMATOR : SI; SI REMARK 200 OPTICS : MIRRORS; MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD; CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R; ADSC QUANTUM REMARK 200 270 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 31714 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.095 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 15.000 REMARK 200 R MERGE (I) : 0.09400 REMARK 200 R SYM (I) : 0.09400 REMARK 200 FOR THE DATA SET : 28.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.21 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 14.60 REMARK 200 R MERGE FOR SHELL (I) : 0.84700 REMARK 200 R SYM FOR SHELL (I) : 0.84700 REMARK 200 FOR SHELL : 3.490 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH; MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SHARP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 72.65 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.50 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100MM TRISODIUM CITRATE-HCL, 1.3M REMARK 280 AMMONIUM SULFATE, 210MM POTASSIUM SODIUM TARTRATE, 50MM REMARK 280 IMIDAZOLE, 400MM NACL, 10MM MGCL2, 0.5MM 5'-O-[N-(L-SERYL) REMARK 280 SULFAMOYL]ADENOSINE, PH 5.6, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 4 3 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 Z,X,Y REMARK 290 6555 Z,-X,-Y REMARK 290 7555 -Z,-X,Y REMARK 290 8555 -Z,X,-Y REMARK 290 9555 Y,Z,X REMARK 290 10555 -Y,Z,-X REMARK 290 11555 Y,-Z,-X REMARK 290 12555 -Y,-Z,X REMARK 290 13555 Y,X,-Z REMARK 290 14555 -Y,-X,-Z REMARK 290 15555 Y,-X,Z REMARK 290 16555 -Y,X,Z REMARK 290 17555 X,Z,-Y REMARK 290 18555 -X,Z,Y REMARK 290 19555 -X,-Z,-Y REMARK 290 20555 X,-Z,Y REMARK 290 21555 Z,Y,-X REMARK 290 22555 Z,-Y,X REMARK 290 23555 -Z,Y,X REMARK 290 24555 -Z,-Y,-X REMARK 290 25555 X+1/2,Y+1/2,Z+1/2 REMARK 290 26555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 27555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 28555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 29555 Z+1/2,X+1/2,Y+1/2 REMARK 290 30555 Z+1/2,-X+1/2,-Y+1/2 REMARK 290 31555 -Z+1/2,-X+1/2,Y+1/2 REMARK 290 32555 -Z+1/2,X+1/2,-Y+1/2 REMARK 290 33555 Y+1/2,Z+1/2,X+1/2 REMARK 290 34555 -Y+1/2,Z+1/2,-X+1/2 REMARK 290 35555 Y+1/2,-Z+1/2,-X+1/2 REMARK 290 36555 -Y+1/2,-Z+1/2,X+1/2 REMARK 290 37555 Y+1/2,X+1/2,-Z+1/2 REMARK 290 38555 -Y+1/2,-X+1/2,-Z+1/2 REMARK 290 39555 Y+1/2,-X+1/2,Z+1/2 REMARK 290 40555 -Y+1/2,X+1/2,Z+1/2 REMARK 290 41555 X+1/2,Z+1/2,-Y+1/2 REMARK 290 42555 -X+1/2,Z+1/2,Y+1/2 REMARK 290 43555 -X+1/2,-Z+1/2,-Y+1/2 REMARK 290 44555 X+1/2,-Z+1/2,Y+1/2 REMARK 290 45555 Z+1/2,Y+1/2,-X+1/2 REMARK 290 46555 Z+1/2,-Y+1/2,X+1/2 REMARK 290 47555 -Z+1/2,Y+1/2,X+1/2 REMARK 290 48555 -Z+1/2,-Y+1/2,-X+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 6 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 6 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 7 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 9 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 9 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 9 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 10 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 10 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 12 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 12 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 12 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 13 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 13 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 13 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 14 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 14 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 14 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 15 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 15 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 15 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 16 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 16 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 16 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 17 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 17 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 17 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 18 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 18 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 18 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 19 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 19 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 19 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 20 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 20 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 20 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 21 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 21 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 21 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 22 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 22 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 22 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 23 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 23 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 23 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 24 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 24 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 24 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 25 1.000000 0.000000 0.000000 136.40850 REMARK 290 SMTRY2 25 0.000000 1.000000 0.000000 136.40850 REMARK 290 SMTRY3 25 0.000000 0.000000 1.000000 136.40850 REMARK 290 SMTRY1 26 -1.000000 0.000000 0.000000 136.40850 REMARK 290 SMTRY2 26 0.000000 -1.000000 0.000000 136.40850 REMARK 290 SMTRY3 26 0.000000 0.000000 1.000000 136.40850 REMARK 290 SMTRY1 27 -1.000000 0.000000 0.000000 136.40850 REMARK 290 SMTRY2 27 0.000000 1.000000 0.000000 136.40850 REMARK 290 SMTRY3 27 0.000000 0.000000 -1.000000 136.40850 REMARK 290 SMTRY1 28 1.000000 0.000000 0.000000 136.40850 REMARK 290 SMTRY2 28 0.000000 -1.000000 0.000000 136.40850 REMARK 290 SMTRY3 28 0.000000 0.000000 -1.000000 136.40850 REMARK 290 SMTRY1 29 0.000000 0.000000 1.000000 136.40850 REMARK 290 SMTRY2 29 1.000000 0.000000 0.000000 136.40850 REMARK 290 SMTRY3 29 0.000000 1.000000 0.000000 136.40850 REMARK 290 SMTRY1 30 0.000000 0.000000 1.000000 136.40850 REMARK 290 SMTRY2 30 -1.000000 0.000000 0.000000 136.40850 REMARK 290 SMTRY3 30 0.000000 -1.000000 0.000000 136.40850 REMARK 290 SMTRY1 31 0.000000 0.000000 -1.000000 136.40850 REMARK 290 SMTRY2 31 -1.000000 0.000000 0.000000 136.40850 REMARK 290 SMTRY3 31 0.000000 1.000000 0.000000 136.40850 REMARK 290 SMTRY1 32 0.000000 0.000000 -1.000000 136.40850 REMARK 290 SMTRY2 32 1.000000 0.000000 0.000000 136.40850 REMARK 290 SMTRY3 32 0.000000 -1.000000 0.000000 136.40850 REMARK 290 SMTRY1 33 0.000000 1.000000 0.000000 136.40850 REMARK 290 SMTRY2 33 0.000000 0.000000 1.000000 136.40850 REMARK 290 SMTRY3 33 1.000000 0.000000 0.000000 136.40850 REMARK 290 SMTRY1 34 0.000000 -1.000000 0.000000 136.40850 REMARK 290 SMTRY2 34 0.000000 0.000000 1.000000 136.40850 REMARK 290 SMTRY3 34 -1.000000 0.000000 0.000000 136.40850 REMARK 290 SMTRY1 35 0.000000 1.000000 0.000000 136.40850 REMARK 290 SMTRY2 35 0.000000 0.000000 -1.000000 136.40850 REMARK 290 SMTRY3 35 -1.000000 0.000000 0.000000 136.40850 REMARK 290 SMTRY1 36 0.000000 -1.000000 0.000000 136.40850 REMARK 290 SMTRY2 36 0.000000 0.000000 -1.000000 136.40850 REMARK 290 SMTRY3 36 1.000000 0.000000 0.000000 136.40850 REMARK 290 SMTRY1 37 0.000000 1.000000 0.000000 136.40850 REMARK 290 SMTRY2 37 1.000000 0.000000 0.000000 136.40850 REMARK 290 SMTRY3 37 0.000000 0.000000 -1.000000 136.40850 REMARK 290 SMTRY1 38 0.000000 -1.000000 0.000000 136.40850 REMARK 290 SMTRY2 38 -1.000000 0.000000 0.000000 136.40850 REMARK 290 SMTRY3 38 0.000000 0.000000 -1.000000 136.40850 REMARK 290 SMTRY1 39 0.000000 1.000000 0.000000 136.40850 REMARK 290 SMTRY2 39 -1.000000 0.000000 0.000000 136.40850 REMARK 290 SMTRY3 39 0.000000 0.000000 1.000000 136.40850 REMARK 290 SMTRY1 40 0.000000 -1.000000 0.000000 136.40850 REMARK 290 SMTRY2 40 1.000000 0.000000 0.000000 136.40850 REMARK 290 SMTRY3 40 0.000000 0.000000 1.000000 136.40850 REMARK 290 SMTRY1 41 1.000000 0.000000 0.000000 136.40850 REMARK 290 SMTRY2 41 0.000000 0.000000 1.000000 136.40850 REMARK 290 SMTRY3 41 0.000000 -1.000000 0.000000 136.40850 REMARK 290 SMTRY1 42 -1.000000 0.000000 0.000000 136.40850 REMARK 290 SMTRY2 42 0.000000 0.000000 1.000000 136.40850 REMARK 290 SMTRY3 42 0.000000 1.000000 0.000000 136.40850 REMARK 290 SMTRY1 43 -1.000000 0.000000 0.000000 136.40850 REMARK 290 SMTRY2 43 0.000000 0.000000 -1.000000 136.40850 REMARK 290 SMTRY3 43 0.000000 -1.000000 0.000000 136.40850 REMARK 290 SMTRY1 44 1.000000 0.000000 0.000000 136.40850 REMARK 290 SMTRY2 44 0.000000 0.000000 -1.000000 136.40850 REMARK 290 SMTRY3 44 0.000000 1.000000 0.000000 136.40850 REMARK 290 SMTRY1 45 0.000000 0.000000 1.000000 136.40850 REMARK 290 SMTRY2 45 0.000000 1.000000 0.000000 136.40850 REMARK 290 SMTRY3 45 -1.000000 0.000000 0.000000 136.40850 REMARK 290 SMTRY1 46 0.000000 0.000000 1.000000 136.40850 REMARK 290 SMTRY2 46 0.000000 -1.000000 0.000000 136.40850 REMARK 290 SMTRY3 46 1.000000 0.000000 0.000000 136.40850 REMARK 290 SMTRY1 47 0.000000 0.000000 -1.000000 136.40850 REMARK 290 SMTRY2 47 0.000000 1.000000 0.000000 136.40850 REMARK 290 SMTRY3 47 1.000000 0.000000 0.000000 136.40850 REMARK 290 SMTRY1 48 0.000000 0.000000 -1.000000 136.40850 REMARK 290 SMTRY2 48 0.000000 -1.000000 0.000000 136.40850 REMARK 290 SMTRY3 48 -1.000000 0.000000 0.000000 136.40850 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 18180 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 75090 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -346.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 -136.40850 REMARK 350 BIOMT2 2 0.000000 0.000000 -1.000000 136.40850 REMARK 350 BIOMT3 2 0.000000 -1.000000 0.000000 136.40850 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 A B 76 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 G B 1 P G B 1 OP3 -0.124 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO A 210 C - N - CA ANGL. DEV. = 11.3 DEGREES REMARK 500 PRO A 316 C - N - CA ANGL. DEV. = 12.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 36 -74.71 -112.19 REMARK 500 VAL A 236 -74.21 -102.96 REMARK 500 ARG A 260 -2.75 74.32 REMARK 500 GLN A 318 -0.42 81.06 REMARK 500 ARG A 414 -67.59 -126.36 REMARK 500 LEU A 415 -5.69 -55.39 REMARK 500 LEU A 416 -8.82 -55.08 REMARK 500 GLU A 417 -8.66 -55.50 REMARK 500 PRO A 520 74.01 -67.60 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A2001 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SSA A2002 N10 REMARK 620 2 GLU A 368 OE2 115.5 REMARK 620 3 CYS A 319 SG 115.9 96.2 REMARK 620 4 CYS A 478 SG 101.1 92.7 133.0 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 2001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SSA A 2002 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PT A 2003 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PT A 2004 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PT A 2006 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PT A 2007 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PT A 2009 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PT A 2010 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PT A 2012 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PT A 2013 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PT A 2015 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PT A 2017 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 2018 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 2019 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 2020 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 2021 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 2022 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 2023 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 101 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 102 DBREF 3W3S A 1 527 UNP Q8TVD2 SYS2_METKA 1 527 DBREF1 3W3S B 1 76 GB AE000657 DBREF2 3W3S B 6626248 727371 727469 SEQADV 3W3S TYR A 55 UNP Q8TVD2 ARG 55 ENGINEERED MUTATION SEQADV 3W3S TYR A 58 UNP Q8TVD2 GLU 58 ENGINEERED MUTATION SEQADV 3W3S TYR A 62 UNP Q8TVD2 GLU 62 ENGINEERED MUTATION SEQADV 3W3S TYR A 116 UNP Q8TVD2 ARG 116 ENGINEERED MUTATION SEQADV 3W3S TYR A 118 UNP Q8TVD2 ASP 118 ENGINEERED MUTATION SEQADV 3W3S ARG A 189 UNP Q8TVD2 GLU 189 ENGINEERED MUTATION SEQADV 3W3S ARG A 193 UNP Q8TVD2 ASP 193 ENGINEERED MUTATION SEQADV 3W3S TYR A 379 UNP Q8TVD2 GLU 379 ENGINEERED MUTATION SEQADV 3W3S ARG A 383 UNP Q8TVD2 GLU 383 ENGINEERED MUTATION SEQADV 3W3S TYR A 497 UNP Q8TVD2 GLU 497 ENGINEERED MUTATION SEQADV 3W3S TYR A 499 UNP Q8TVD2 GLU 499 ENGINEERED MUTATION SEQRES 1 A 527 MSE GLU LEU LYS PHE SER ALA GLU VAL GLU LEU THR LEU SEQRES 2 A 527 SER ARG GLU VAL ASP PRO ALA GLU ILE GLU PRO THR VAL SEQRES 3 A 527 GLU GLU PHE VAL LYS GLU ALA ASN GLU ASP LEU LEU GLN SEQRES 4 A 527 ARG GLY VAL PRO THR GLY LYS GLU GLY ALA LYS ILE GLU SEQRES 5 A 527 SER TYR TYR VAL LEU TYR ASP THR ILE TYR MSE GLU ILE SEQRES 6 A 527 THR GLY THR ARG TYR LEU ARG PRO HIS GLU ALA ALA MSE SEQRES 7 A 527 ARG VAL ARG LYS ARG LEU ALA GLU ARG LEU GLY ARG LYS SEQRES 8 A 527 HIS ARG VAL GLY VAL ARG ASP LEU LYS ILE PRO ARG TYR SEQRES 9 A 527 GLU VAL VAL LEU ARG PHE ASP ARG GLU VAL THR TYR ASP SEQRES 10 A 527 TYR VAL GLY TYR VAL PRO VAL ALA ASP ASP VAL VAL VAL SEQRES 11 A 527 GLU ASP GLY THR VAL ARG LEU THR PHE GLN ASP VAL ASP SEQRES 12 A 527 GLU GLU MSE LEU ARG ARG HIS VAL ILE ASP ARG VAL ILE SEQRES 13 A 527 ARG LEU VAL ALA TRP ALA VAL GLU GLU ARG SER GLU LEU SEQRES 14 A 527 VAL GLU ARG VAL THR LYS VAL GLU PRO GLY THR VAL VAL SEQRES 15 A 527 ASP GLU SER GLY PRO ARG ARG ILE ARG PHE ARG GLY ASP SEQRES 16 A 527 VAL THR GLU GLU ALA ARG ARG ARG GLY TRP VAL LYS GLU SEQRES 17 A 527 PHE PRO GLY ARG GLY GLN TRP ILE TYR THR PRO PRO MSE SEQRES 18 A 527 ALA ALA LEU PHE GLU VAL LEU ARG ASP PHE LEU LEU GLU SEQRES 19 A 527 ARG VAL THR ARG LYS LEU GLY PHE GLU PRO ALA LEU PHE SEQRES 20 A 527 PRO LYS LEU ILE PRO LEU GLU THR MSE PHE ARG MSE ARG SEQRES 21 A 527 TYR LEU HIS GLY LEU PRO ASP GLY MSE TYR TYR VAL CYS SEQRES 22 A 527 PRO PRO LYS ARG ASP PRO GLU LEU PHE ASP ASP PHE LYS SEQRES 23 A 527 ARG GLU LEU TYR VAL TRP GLY GLU LEU ASN GLU ARG THR SEQRES 24 A 527 LEU GLY SER LEU LYS GLU LYS LEU ARG ASP PRO GLY TYR SEQRES 25 A 527 VAL LEU ALA PRO ALA GLN CYS GLU PRO PHE TYR GLU LEU SEQRES 26 A 527 LEU ARG ASP GLU VAL VAL ASP PRO GLU ARG LEU PRO ILE SEQRES 27 A 527 LYS LEU TYR ASP CYS SER GLY TRP THR TYR ARG TRP GLU SEQRES 28 A 527 GLY GLY ALA ALA LYS GLY LEU GLU ARG VAL ASN GLU PHE SEQRES 29 A 527 GLN ARG ILE GLU HIS VAL TRP ILE ALA GLU PRO GLU GLU SEQRES 30 A 527 ALA TYR ARG ILE ARG ARG GLU LEU LEU GLU ALA THR LYS SEQRES 31 A 527 ARG VAL ALA GLU GLU LEU GLU LEU GLU TRP LYS VAL VAL SEQRES 32 A 527 VAL SER ASP ASP PRO PHE TYR LEU GLU GLY ARG LEU LEU SEQRES 33 A 527 GLU ASP ARG ASP ILE GLU LEU PRO ASP VAL PRO SER TYR SEQRES 34 A 527 GLU PHE GLU VAL TYR LEU PRO PHE LYS GLY GLU ARG SER SEQRES 35 A 527 SER GLU GLU ALA TRP ILE SER VAL GLY SER PHE ASN VAL SEQRES 36 A 527 HIS GLY GLU HIS PHE VAL ASP GLY PHE ASN VAL LYS GLU SEQRES 37 A 527 LYS SER GLY ARG THR LEU PHE THR GLY CYS ALA GLY LEU SEQRES 38 A 527 GLY VAL THR ARG TRP VAL VAL GLY LEU LEU ALA GLN HIS SEQRES 39 A 527 GLY PHE TYR PRO TYR GLU TRP PRO GLU PRO ILE LEU GLU SEQRES 40 A 527 ARG ILE ASP GLU LYS PHE GLY GLY LEU PRO GLU VAL PRO SEQRES 41 A 527 LYS THR LEU THR TRP PRO GLU SEQRES 1 B 99 G G G A G A G G U U G G C SEQRES 2 B 99 C G G C U G G U G C C G C SEQRES 3 B 99 C C C G G G A C U U C A A SEQRES 4 B 99 A U C C C G U G G G A G G SEQRES 5 B 99 U C C C G C A A G G G A G SEQRES 6 B 99 C U C C G G A G G G U U C SEQRES 7 B 99 G A U U C C C U C C C U C SEQRES 8 B 99 U C C C G C C A MODRES 3W3S MSE A 1 MET SELENOMETHIONINE MODRES 3W3S MSE A 63 MET SELENOMETHIONINE MODRES 3W3S MSE A 78 MET SELENOMETHIONINE MODRES 3W3S MSE A 146 MET SELENOMETHIONINE MODRES 3W3S MSE A 221 MET SELENOMETHIONINE MODRES 3W3S MSE A 256 MET SELENOMETHIONINE MODRES 3W3S MSE A 259 MET SELENOMETHIONINE MODRES 3W3S MSE A 269 MET SELENOMETHIONINE HET MSE A 1 8 HET MSE A 63 8 HET MSE A 78 8 HET MSE A 146 8 HET MSE A 221 8 HET MSE A 256 8 HET MSE A 259 8 HET MSE A 269 8 HET ZN A2001 1 HET SSA A2002 29 HET PT A2003 1 HET PT A2004 1 HET PT A2005 1 HET PT A2006 1 HET PT A2007 1 HET PT A2008 1 HET PT A2009 1 HET PT A2010 1 HET PT A2011 1 HET PT A2012 1 HET PT A2013 1 HET PT A2014 1 HET PT A2015 1 HET PT A2016 1 HET PT A2017 1 HET SO4 A2018 5 HET SO4 A2019 5 HET SO4 A2020 5 HET SO4 A2021 5 HET SO4 A2022 5 HET SO4 A2023 5 HET SO4 B 101 5 HET SO4 B 102 5 HETNAM MSE SELENOMETHIONINE HETNAM ZN ZINC ION HETNAM SSA 5'-O-(N-(L-SERYL)-SULFAMOYL)ADENOSINE HETNAM PT PLATINUM (II) ION HETNAM SO4 SULFATE ION FORMUL 1 MSE 8(C5 H11 N O2 SE) FORMUL 3 ZN ZN 2+ FORMUL 4 SSA C13 H19 N7 O8 S FORMUL 5 PT 15(PT 2+) FORMUL 20 SO4 8(O4 S 2-) HELIX 1 1 ASP A 18 ASP A 36 1 19 HELIX 2 2 LEU A 37 ARG A 40 5 4 HELIX 3 3 ARG A 72 ARG A 93 1 22 HELIX 4 4 THR A 115 GLY A 120 1 6 HELIX 5 5 ASP A 143 ARG A 149 1 7 HELIX 6 6 HIS A 150 GLU A 164 1 15 HELIX 7 7 GLU A 168 ARG A 172 5 5 HELIX 8 8 ASP A 195 ARG A 203 1 9 HELIX 9 9 THR A 218 VAL A 236 1 19 HELIX 10 10 LEU A 253 MSE A 259 1 7 HELIX 11 11 ARG A 260 LEU A 265 1 6 HELIX 12 12 PRO A 266 MSE A 269 5 4 HELIX 13 13 ASP A 278 GLY A 293 1 16 HELIX 14 14 ASN A 296 LYS A 306 1 11 HELIX 15 15 GLU A 320 ARG A 327 1 8 HELIX 16 16 GLU A 374 LEU A 396 1 23 HELIX 17 17 ARG A 414 ARG A 419 5 6 HELIX 18 18 PRO A 436 GLY A 439 5 4 HELIX 19 19 SER A 443 GLU A 445 5 3 HELIX 20 20 GLU A 458 PHE A 464 1 7 HELIX 21 21 VAL A 483 GLY A 495 1 13 HELIX 22 22 TYR A 497 TRP A 501 5 5 HELIX 23 23 PRO A 502 GLY A 514 1 13 SHEET 1 A 6 LYS A 50 VAL A 56 0 SHEET 2 A 6 THR A 60 THR A 68 -1 O TYR A 62 N TYR A 55 SHEET 3 A 6 GLU A 2 LEU A 13 -1 N ALA A 7 O ILE A 65 SHEET 4 A 6 VAL A 96 ARG A 109 -1 O ASP A 98 N THR A 12 SHEET 5 A 6 THR A 134 GLN A 140 -1 O PHE A 139 N TYR A 104 SHEET 6 A 6 ASP A 127 VAL A 130 -1 N VAL A 129 O ARG A 136 SHEET 1 B 8 VAL A 181 GLU A 184 0 SHEET 2 B 8 TRP A 400 VAL A 404 -1 O VAL A 402 N VAL A 182 SHEET 3 B 8 SER A 428 TYR A 434 -1 O GLU A 432 N LYS A 401 SHEET 4 B 8 TRP A 447 GLY A 457 -1 O PHE A 453 N TYR A 429 SHEET 5 B 8 PHE A 475 GLY A 482 -1 O THR A 476 N HIS A 456 SHEET 6 B 8 GLU A 363 ALA A 373 -1 N HIS A 369 O ALA A 479 SHEET 7 B 8 ILE A 338 ASP A 342 -1 N LEU A 340 O VAL A 370 SHEET 8 B 8 GLU A 243 PRO A 244 1 N GLU A 243 O LYS A 339 SHEET 1 C 7 VAL A 181 GLU A 184 0 SHEET 2 C 7 TRP A 400 VAL A 404 -1 O VAL A 402 N VAL A 182 SHEET 3 C 7 SER A 428 TYR A 434 -1 O GLU A 432 N LYS A 401 SHEET 4 C 7 TRP A 447 GLY A 457 -1 O PHE A 453 N TYR A 429 SHEET 5 C 7 PHE A 475 GLY A 482 -1 O THR A 476 N HIS A 456 SHEET 6 C 7 GLU A 363 ALA A 373 -1 N HIS A 369 O ALA A 479 SHEET 7 C 7 TRP A 346 TYR A 348 -1 N THR A 347 O PHE A 364 SHEET 1 D 2 VAL A 206 GLU A 208 0 SHEET 2 D 2 TRP A 215 TYR A 217 -1 O ILE A 216 N LYS A 207 SHEET 1 E 3 LEU A 250 PRO A 252 0 SHEET 2 E 3 TYR A 312 LEU A 314 -1 O VAL A 313 N ILE A 251 SHEET 3 E 3 TYR A 271 VAL A 272 -1 N VAL A 272 O TYR A 312 SHEET 1 F 2 VAL A 330 VAL A 331 0 SHEET 2 F 2 LYS A 467 GLU A 468 1 O LYS A 467 N VAL A 331 LINK C MSE A 1 N GLU A 2 1555 1555 1.33 LINK C TYR A 62 N MSE A 63 1555 1555 1.32 LINK C MSE A 63 N GLU A 64 1555 1555 1.33 LINK C ALA A 77 N MSE A 78 1555 1555 1.33 LINK C MSE A 78 N ARG A 79 1555 1555 1.33 LINK C GLU A 145 N MSE A 146 1555 1555 1.34 LINK C MSE A 146 N LEU A 147 1555 1555 1.33 LINK C PRO A 220 N MSE A 221 1555 1555 1.33 LINK C MSE A 221 N ALA A 222 1555 1555 1.33 LINK C THR A 255 N MSE A 256 1555 1555 1.32 LINK C MSE A 256 N PHE A 257 1555 1555 1.33 LINK C ARG A 258 N MSE A 259 1555 1555 1.33 LINK C MSE A 259 N ARG A 260 1555 1555 1.32 LINK C GLY A 268 N MSE A 269 1555 1555 1.32 LINK C MSE A 269 N TYR A 270 1555 1555 1.34 LINK ZN ZN A2001 N10ASSA A2002 1555 1555 2.19 LINK OE2 GLU A 368 ZN ZN A2001 1555 1555 2.21 LINK SG CYS A 319 ZN ZN A2001 1555 1555 2.39 LINK SG CYS A 478 ZN ZN A2001 1555 1555 2.42 LINK OE1 GLU A 105 PT PT A2010 1555 1555 2.58 CISPEP 1 LEU A 336 PRO A 337 0 -4.02 SITE 1 AC1 4 CYS A 319 GLU A 368 CYS A 478 SSA A2002 SITE 1 AC2 17 ALA A 317 ARG A 349 GLU A 351 VAL A 361 SITE 2 AC2 17 PHE A 364 ARG A 366 GLU A 368 PHE A 409 SITE 3 AC2 17 SER A 449 VAL A 450 GLY A 451 SER A 452 SITE 4 AC2 17 ASN A 454 CYS A 478 GLY A 482 ARG A 485 SITE 5 AC2 17 ZN A2001 SITE 1 AC3 2 PHE A 364 ARG A 485 SITE 1 AC4 1 TYR A 410 SITE 1 AC5 1 U B 47C SITE 1 AC6 1 HIS A 74 SITE 1 AC7 3 ARG A 260 HIS A 263 LEU A 416 SITE 1 AC8 3 GLU A 105 GLU A 131 ARG A 136 SITE 1 AC9 1 GLY A 194 SITE 1 BC1 3 ARG A 166 SER A 167 ARG A 414 SITE 1 BC2 1 GLU A 144 SITE 1 BC3 2 GLU A 511 LYS A 512 SITE 1 BC4 2 ARG A 40 ARG A 83 SITE 1 BC5 4 ARG A 40 GLY A 41 A B 47N G B 47O SITE 1 BC6 5 MSE A 1 PHE A 110 ASP A 111 ARG A 112 SITE 2 BC6 5 GLU A 164 SITE 1 BC7 2 ASN A 296 GLU A 297 SITE 1 BC8 2 ARG A 308 ASP A 309 SITE 1 BC9 2 ARG A 212 ARG A 308 SITE 1 CC1 1 G B 47B SITE 1 CC2 3 C B 47D C B 47E C B 47F CRYST1 272.817 272.817 272.817 90.00 90.00 90.00 I 4 3 2 48 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.003665 0.000000 0.000000 0.00000 SCALE2 0.000000 0.003665 0.000000 0.00000 SCALE3 0.000000 0.000000 0.003665 0.00000 HETATM 1 N MSE A 1 -26.575 10.845 124.921 1.00109.47 N ANISOU 1 N MSE A 1 10928 11521 19146 -1395 -311 -1831 N HETATM 2 CA MSE A 1 -27.694 10.118 125.524 1.00112.41 C ANISOU 2 CA MSE A 1 11696 12087 18926 -1073 -553 -1715 C HETATM 3 C MSE A 1 -27.691 8.628 125.161 1.00110.31 C ANISOU 3 C MSE A 1 11364 12158 18391 -849 -622 -1573 C HETATM 4 O MSE A 1 -28.102 8.251 124.064 1.00103.01 O ANISOU 4 O MSE A 1 10508 11306 17327 -803 -286 -1261 O HETATM 5 CB MSE A 1 -29.032 10.731 125.107 1.00108.90 C ANISOU 5 CB MSE A 1 11678 11494 18205 -1004 -252 -1399 C HETATM 6 CG MSE A 1 -30.233 9.945 125.620 1.00105.88 C ANISOU 6 CG MSE A 1 11639 11303 17286 -699 -416 -1274 C HETATM 7 SE MSE A 1 -31.844 10.007 124.488 1.00166.79 SE ANISOU 7 SE MSE A 1 19687 19003 24681 -533 -30 -784 SE HETATM 8 CE MSE A 1 -31.084 9.266 122.842 1.00136.50 C ANISOU 8 CE MSE A 1 15599 15329 20937 -608 253 -545 C