HEADER HYDROLASE 18-JAN-13 3W52 TITLE ZINC-DEPENDENT BIFUNCTIONAL NUCLEASE COMPND MOL_ID: 1; COMPND 2 MOLECULE: ENDONUCLEASE 2; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 28-290; COMPND 5 SYNONYM: ATENDO2, DEOXYRIBONUCLEASE ENDO2, SINGLE-STRANDED-NUCLEATE COMPND 6 ENDONUCLEASE ENDO2; COMPND 7 EC: 3.1.30.1; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ARABIDOPSIS THALIANA; SOURCE 3 ORGANISM_COMMON: MOUSE-EAR CRESS,THALE-CRESS; SOURCE 4 ORGANISM_TAXID: 3702; SOURCE 5 GENE: ENDO2, AT1G68290, T22E19.8; SOURCE 6 EXPRESSION_SYSTEM: AGROBACTERIUM TUMEFACIENS; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 358; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PBI121 KEYWDS MOSTLY ALPHA-HELICAL, DNA, RNA, NUCLEASE, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR T.L.CHOU,T.P.KO,C.Y.KO,J.F.SHAW,A.H.J.WANG REVDAT 4 08-NOV-23 3W52 1 HETSYN REVDAT 3 29-JUL-20 3W52 1 COMPND REMARK SEQADV HETNAM REVDAT 3 2 1 LINK SITE ATOM REVDAT 2 22-NOV-17 3W52 1 REMARK REVDAT 1 17-APR-13 3W52 0 JRNL AUTH T.L.CHOU,T.P.KO,C.Y.KO,T.Y.LIN,R.T.GUO,T.F.YU,H.C.CHAN, JRNL AUTH 2 J.F.SHAW,A.H.J.WANG JRNL TITL MECHANISTIC INSIGHTS TO CATALYSIS BY A ZINC-DEPENDENT JRNL TITL 2 BI-FUNCTIONAL NUCLEASE FROM ARABIDOPSIS THALIANA JRNL REF BIOCATAL AGRIC BIOTECHNOL 2013 JRNL REFN ISSN 1878-8181 JRNL DOI 10.1016/J.BCAB.2013.03.006 REMARK 2 REMARK 2 RESOLUTION. 1.76 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.76 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 25.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : 35526 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.167 REMARK 3 FREE R VALUE : 0.196 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : 1762 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.76 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.82 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 89.00 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.2000 REMARK 3 BIN FREE R VALUE : 0.2460 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : 156 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2051 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 123 REMARK 3 SOLVENT ATOMS : 375 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.16 REMARK 3 ESD FROM SIGMAA (A) : 0.06 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.20 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.10 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.020 REMARK 3 BOND ANGLES (DEGREES) : 2.000 REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3W52 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 30-JAN-13. REMARK 100 THE DEPOSITION ID IS D_1000095895. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 21-MAR-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSRRC REMARK 200 BEAMLINE : BL13B1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9732 REMARK 200 MONOCHROMATOR : MIRRORS REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 36392 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.760 REMARK 200 RESOLUTION RANGE LOW (A) : 25.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 200 DATA REDUNDANCY : 7.700 REMARK 200 R MERGE (I) : 0.08400 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 27.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.76 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.82 REMARK 200 COMPLETENESS FOR SHELL (%) : 94.0 REMARK 200 DATA REDUNDANCY IN SHELL : 5.80 REMARK 200 R MERGE FOR SHELL (I) : 0.33700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 4.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: CNS REMARK 200 STARTING MODEL: PDB ENTRY 1AK0 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 58.19 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.94 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 50MM NACL, 20MM TRIS(PH7.5), 125 MICRO REMARK 280 -M THIOPHOSPHORYLATED ADENOSINE HEXANUCLEOTIDE, 30%(W/V) PEG3350, REMARK 280 0.2M LI2SO4, 0.1M TRIS, PH 8.5, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 27.12700 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 49.74350 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 33.36350 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 49.74350 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 27.12700 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 33.36350 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 THR A 101 REMARK 465 ALA A 102 REMARK 465 ALA A 103 REMARK 465 SER A 104 REMARK 465 SER A 105 REMARK 465 GLN A 106 REMARK 465 SER A 107 REMARK 465 HIS A 264 REMARK 465 HIS A 265 REMARK 465 HIS A 266 REMARK 465 HIS A 267 REMARK 465 HIS A 268 REMARK 465 HIS A 269 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 CB SER A 172 O HOH A 820 1.92 REMARK 500 O6 BMA B 3 O HOH A 635 2.00 REMARK 500 O HOH A 813 O HOH A 814 2.03 REMARK 500 O HOH A 681 O HOH A 820 2.09 REMARK 500 O HOH A 797 O HOH A 829 2.13 REMARK 500 O3 BMA B 3 O HOH A 524 2.16 REMARK 500 O HOH A 533 O HOH A 815 2.17 REMARK 500 O HOH A 666 O HOH A 865 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 CYS A 66 37.59 -97.78 REMARK 500 TYR A 147 -125.52 51.63 REMARK 500 SER A 159 -46.14 -132.87 REMARK 500 THR A 203 -70.77 -126.49 REMARK 500 GLU A 232 -135.48 -145.80 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 311 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 TRP A 1 N REMARK 620 2 TRP A 1 O 77.5 REMARK 620 3 HIS A 6 NE2 116.1 91.8 REMARK 620 4 ASP A 124 OD1 90.3 167.7 92.5 REMARK 620 5 SO4 A 312 O1 120.5 91.1 122.6 96.2 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 309 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 45 OD1 REMARK 620 2 HIS A 58 ND1 85.6 REMARK 620 3 HIS A 120 NE2 81.3 101.1 REMARK 620 4 ASP A 124 OD2 173.9 97.2 92.8 REMARK 620 5 SO4 A 312 O1 85.3 157.9 97.4 93.9 REMARK 620 6 SO4 A 312 O2 83.2 95.8 156.0 101.9 63.1 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 310 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 130 NE2 REMARK 620 2 HIS A 154 NE2 91.6 REMARK 620 3 ASP A 158 OD2 143.5 90.5 REMARK 620 4 ASP A 158 OD1 87.8 92.1 55.7 REMARK 620 5 SO4 A 312 O3 91.3 174.4 89.9 92.8 REMARK 620 6 HOH A 501 O 115.6 89.4 100.8 156.5 85.0 REMARK 620 N 1 2 3 4 5 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3SNG RELATED DB: PDB REMARK 900 SIMILAR ENZYME FROM TOMATO REMARK 900 RELATED ID: 1AK0 RELATED DB: PDB REMARK 900 SIMILAR THREE-ZINC NUCLEASE DBREF 3W52 A 1 263 UNP Q9C9G4 ENDO2_ARATH 28 290 SEQADV 3W52 HIS A 264 UNP Q9C9G4 EXPRESSION TAG SEQADV 3W52 HIS A 265 UNP Q9C9G4 EXPRESSION TAG SEQADV 3W52 HIS A 266 UNP Q9C9G4 EXPRESSION TAG SEQADV 3W52 HIS A 267 UNP Q9C9G4 EXPRESSION TAG SEQADV 3W52 HIS A 268 UNP Q9C9G4 EXPRESSION TAG SEQADV 3W52 HIS A 269 UNP Q9C9G4 EXPRESSION TAG SEQRES 1 A 269 TRP GLY LYS GLU GLY HIS GLU ILE ILE CYS LYS ILE ALA SEQRES 2 A 269 GLN THR ARG LEU ASP GLU THR ALA ALA LYS ALA VAL LYS SEQRES 3 A 269 GLU LEU LEU PRO GLU SER ALA GLU GLY ASP LEU SER SER SEQRES 4 A 269 LEU CYS LEU TRP ALA ASP ARG VAL LYS PHE ARG TYR HIS SEQRES 5 A 269 TRP SER SER PRO LEU HIS TYR ILE ASN THR PRO ASP ALA SEQRES 6 A 269 CYS SER TYR GLN TYR ASN ARG ASP CYS LYS ASP GLU SER SEQRES 7 A 269 GLY GLU LYS GLY ARG CYS VAL ALA GLY ALA ILE TYR ASN SEQRES 8 A 269 TYR THR THR GLN LEU LEU SER TYR LYS THR ALA ALA SER SEQRES 9 A 269 SER GLN SER GLN TYR ASN LEU THR GLU ALA LEU LEU PHE SEQRES 10 A 269 VAL SER HIS PHE MET GLY ASP ILE HIS GLN PRO LEU HIS SEQRES 11 A 269 VAL SER TYR ALA SER ASP LYS GLY GLY ASN THR ILE GLU SEQRES 12 A 269 VAL HIS TRP TYR THR ARG LYS ALA ASN LEU HIS HIS ILE SEQRES 13 A 269 TRP ASP SER ASN ILE ILE GLU THR ALA GLU ALA ASP LEU SEQRES 14 A 269 TYR ASN SER ALA LEU GLU GLY MET VAL ASP ALA LEU LYS SEQRES 15 A 269 LYS ASN ILE THR THR GLU TRP ALA ASP GLN VAL LYS ARG SEQRES 16 A 269 TRP GLU THR CYS THR LYS LYS THR ALA CYS PRO ASP ILE SEQRES 17 A 269 TYR ALA SER GLU GLY ILE GLN ALA ALA CYS ASP TRP ALA SEQRES 18 A 269 TYR LYS GLY VAL THR GLU GLY ASP THR LEU GLU ASP GLU SEQRES 19 A 269 TYR PHE TYR SER ARG LEU PRO ILE VAL TYR GLN ARG LEU SEQRES 20 A 269 ALA GLN GLY GLY VAL ARG LEU ALA ALA THR LEU ASN ARG SEQRES 21 A 269 ILE PHE GLY HIS HIS HIS HIS HIS HIS MODRES 3W52 ASN A 184 ASN GLYCOSYLATION SITE MODRES 3W52 ASN A 110 ASN GLYCOSYLATION SITE MODRES 3W52 ASN A 91 ASN GLYCOSYLATION SITE HET NAG B 1 14 HET NAG B 2 14 HET BMA B 3 11 HET NAG C 1 14 HET NAG C 2 14 HET NAG D 1 14 HET NAG D 2 14 HET ADE A 308 10 HET ZN A 309 1 HET ZN A 310 1 HET ZN A 311 1 HET SO4 A 312 5 HET SO4 A 313 5 HET SO4 A 314 5 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM BMA BETA-D-MANNOPYRANOSE HETNAM ADE ADENINE HETNAM ZN ZINC ION HETNAM SO4 SULFATE ION HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN BMA BETA-D-MANNOSE; D-MANNOSE; MANNOSE FORMUL 2 NAG 6(C8 H15 N O6) FORMUL 2 BMA C6 H12 O6 FORMUL 5 ADE C5 H5 N5 FORMUL 6 ZN 3(ZN 2+) FORMUL 9 SO4 3(O4 S 2-) FORMUL 12 HOH *375(H2 O) HELIX 1 1 GLY A 2 THR A 15 1 14 HELIX 2 2 ASP A 18 LEU A 29 1 12 HELIX 3 3 PRO A 30 GLU A 34 5 5 HELIX 4 4 ASP A 36 CYS A 41 5 6 HELIX 5 5 LEU A 42 LYS A 48 5 7 HELIX 6 6 TYR A 51 TYR A 59 5 9 HELIX 7 7 GLN A 69 CYS A 74 1 6 HELIX 8 8 CYS A 84 LEU A 97 1 14 HELIX 9 9 ASN A 110 ILE A 125 1 16 HELIX 10 10 HIS A 126 LEU A 129 5 4 HELIX 11 11 SER A 135 LYS A 137 5 3 HELIX 12 12 LEU A 153 SER A 159 1 7 HELIX 13 13 SER A 159 LEU A 169 1 11 HELIX 14 14 ALA A 173 GLU A 188 1 16 HELIX 15 15 TRP A 189 THR A 198 1 10 HELIX 16 16 CYS A 205 TRP A 220 1 16 HELIX 17 17 GLU A 232 GLY A 263 1 32 SHEET 1 A 2 ILE A 60 THR A 62 0 SHEET 2 A 2 VAL A 131 TYR A 133 1 O SER A 132 N THR A 62 SHEET 1 B 3 ARG A 149 ASN A 152 0 SHEET 2 B 3 GLU A 143 TRP A 146 -1 N VAL A 144 O ALA A 151 SHEET 3 B 3 THR A 230 LEU A 231 1 O LEU A 231 N HIS A 145 SSBOND 1 CYS A 10 CYS A 41 1555 1555 2.03 SSBOND 2 CYS A 66 CYS A 218 1555 1555 2.11 SSBOND 3 CYS A 74 CYS A 84 1555 1555 2.10 SSBOND 4 CYS A 199 CYS A 205 1555 1555 2.08 LINK ND2 ASN A 91 C1 NAG B 1 1555 1555 1.46 LINK ND2 ASN A 110 C1 NAG C 1 1555 1555 1.45 LINK ND2 ASN A 184 C1 NAG D 1 1555 1555 1.44 LINK O4 NAG B 1 C1 NAG B 2 1555 1555 1.38 LINK O4 NAG B 2 C1 BMA B 3 1555 1555 1.40 LINK O4 NAG C 1 C1 NAG C 2 1555 1555 1.38 LINK O4 NAG D 1 C1 NAG D 2 1555 1555 1.38 LINK N TRP A 1 ZN ZN A 311 1555 1555 2.04 LINK O TRP A 1 ZN ZN A 311 1555 1555 2.28 LINK NE2 HIS A 6 ZN ZN A 311 1555 1555 2.01 LINK OD1 ASP A 45 ZN ZN A 309 1555 1555 2.50 LINK ND1 HIS A 58 ZN ZN A 309 1555 1555 2.17 LINK NE2 HIS A 120 ZN ZN A 309 1555 1555 2.13 LINK OD2 ASP A 124 ZN ZN A 309 1555 1555 2.09 LINK OD1 ASP A 124 ZN ZN A 311 1555 1555 2.11 LINK NE2 HIS A 130 ZN ZN A 310 1555 1555 2.13 LINK NE2 HIS A 154 ZN ZN A 310 1555 1555 2.15 LINK OD2 ASP A 158 ZN ZN A 310 1555 1555 2.13 LINK OD1 ASP A 158 ZN ZN A 310 1555 1555 2.54 LINK ZN ZN A 309 O1 SO4 A 312 1555 1555 2.11 LINK ZN ZN A 309 O2 SO4 A 312 1555 1555 2.48 LINK ZN ZN A 310 O3 SO4 A 312 1555 1555 2.10 LINK ZN ZN A 310 O HOH A 501 1555 1555 2.18 LINK ZN ZN A 311 O1 SO4 A 312 1555 1555 2.01 CRYST1 54.254 66.727 99.487 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018432 0.000000 0.000000 0.00000 SCALE2 0.000000 0.014986 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010052 0.00000