HEADER HYDROLASE 07-FEB-13 3W5W TITLE MN2+-GMP COMPLEX OF NANORNASE (NRN) FROM BACTEROIDES FRAGILIS COMPND MOL_ID: 1; COMPND 2 MOLECULE: PUTATIVE EXOPOLYPHOSPHATASE-RELATED PROTEIN; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACTEROIDES FRAGILIS; SOURCE 3 ORGANISM_TAXID: 295405; SOURCE 4 STRAIN: YCH46; SOURCE 5 GENE: BF3900; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: ROSETTA2(DE3)PLYSE; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET-21D KEYWDS DHH PHOSPHATASE, DHHA1 MOTIF, PHOSPHATASE, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR Y.UEMURA,N.NAKAGAWA,T.WAKAMATSU,G.T.MONTELIONE,J.F.HUNT,R.MASUI, AUTHOR 2 S.KURAMITSU REVDAT 3 08-NOV-23 3W5W 1 REMARK REVDAT 2 24-AUG-22 3W5W 1 JRNL REMARK SEQADV LINK REVDAT 1 10-JUL-13 3W5W 0 JRNL AUTH Y.UEMURA,N.NAKAGAWA,T.WAKAMATSU,K.KIM,G.T.MONTELIONE, JRNL AUTH 2 J.F.HUNT,S.KURAMITSU,R.MASUI JRNL TITL CRYSTAL STRUCTURE OF THE LIGAND-BINDING FORM OF NANORNASE JRNL TITL 2 FROM BACTEROIDES FRAGILIS, A MEMBER OF THE DHH/DHHA1 JRNL TITL 3 PHOSPHOESTERASE FAMILY OF PROTEINS. JRNL REF FEBS LETT. V. 587 2669 2013 JRNL REFN ISSN 0014-5793 JRNL PMID 23851074 JRNL DOI 10.1016/J.FEBSLET.2013.06.053 REMARK 2 REMARK 2 RESOLUTION. 2.95 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.95 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 99.0 REMARK 3 NUMBER OF REFLECTIONS : 11123 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.215 REMARK 3 FREE R VALUE : 0.270 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 558 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2724 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 26 REMARK 3 SOLVENT ATOMS : 44 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 60.80 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 13.39200 REMARK 3 B22 (A**2) : 13.39200 REMARK 3 B33 (A**2) : -26.78500 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.007 REMARK 3 BOND ANGLES (DEGREES) : NULL REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : 35.70 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : DNA-RNA_REP.PARAM REMARK 3 PARAMETER FILE 3 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 4 : ION.PARAM REMARK 3 PARAMETER FILE 5 : CARBOHYDRATE.PARAM REMARK 3 PARAMETER FILE 6 : 5GP.PARAM REMARK 3 PARAMETER FILE 7 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 TOPOLOGY FILE 2 : NULL REMARK 3 TOPOLOGY FILE 3 : NULL REMARK 3 TOPOLOGY FILE 4 : NULL REMARK 3 TOPOLOGY FILE 5 : NULL REMARK 3 TOPOLOGY FILE 6 : NULL REMARK 3 TOPOLOGY FILE 7 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3W5W COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 18-FEB-13. REMARK 100 THE DEPOSITION ID IS D_1000095925. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 06-NOV-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.2 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SPRING-8 REMARK 200 BEAMLINE : BL26B2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.000000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK, HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 11209 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.950 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 21.90 REMARK 200 R MERGE (I) : 0.09200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.95 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.00 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 22.30 REMARK 200 R MERGE FOR SHELL (I) : 0.30200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 3DMA REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 61.43 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.19 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M SODIUM ACETATE TRIHYDRATE (PH REMARK 280 5.2), 1.6M NACL, 5MM MGCL2, 10MM 3'-PHOSPHOGUANOSINE 5' PHOPHATE, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+1/3 REMARK 290 6555 -X,-X+Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 71.91867 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 35.95933 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 35.95933 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 71.91867 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: -X, -X+Y, -Z+2/3 REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5140 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 28480 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -44.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 350 BIOMT2 2 -0.866025 0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 71.91867 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 LYS A 283 REMARK 465 LYS A 284 REMARK 465 LEU A 344 REMARK 465 GLU A 345 REMARK 465 HIS A 346 REMARK 465 HIS A 347 REMARK 465 HIS A 348 REMARK 465 HIS A 349 REMARK 465 HIS A 350 REMARK 465 HIS A 351 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN A 50 34.07 -91.71 REMARK 500 PRO A 63 152.06 -44.08 REMARK 500 PHE A 65 5.20 -67.89 REMARK 500 ARG A 80 -7.51 -145.57 REMARK 500 TYR A 81 27.97 -144.17 REMARK 500 ASP A 107 112.12 -13.64 REMARK 500 GLU A 108 -43.58 105.86 REMARK 500 TYR A 128 70.56 60.48 REMARK 500 ASN A 213 50.92 -114.52 REMARK 500 TYR A 215 144.18 179.85 REMARK 500 SER A 216 155.52 -42.50 REMARK 500 LYS A 234 -44.72 -28.89 REMARK 500 ASN A 270 33.07 96.23 REMARK 500 THR A 281 88.87 -41.95 REMARK 500 PRO A 297 95.88 -69.74 REMARK 500 PHE A 305 -20.47 -155.50 REMARK 500 ASN A 307 52.11 36.58 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 TYR A 191 0.08 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 402 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 29 NE2 REMARK 620 2 ASP A 33 OD1 65.2 REMARK 620 3 ASP A 99 OD2 76.3 112.4 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 403 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 35 OD2 REMARK 620 2 ASP A 99 OD1 77.7 REMARK 620 3 HIS A 125 NE2 98.9 96.6 REMARK 620 4 ASP A 177 OD2 85.2 162.7 83.5 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 5GP A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN A 403 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3DMA RELATED DB: PDB DBREF 3W5W A 1 343 UNP Q64PD9 Q64PD9_BACFR 1 343 SEQADV 3W5W LEU A 344 UNP Q64PD9 EXPRESSION TAG SEQADV 3W5W GLU A 345 UNP Q64PD9 EXPRESSION TAG SEQADV 3W5W HIS A 346 UNP Q64PD9 EXPRESSION TAG SEQADV 3W5W HIS A 347 UNP Q64PD9 EXPRESSION TAG SEQADV 3W5W HIS A 348 UNP Q64PD9 EXPRESSION TAG SEQADV 3W5W HIS A 349 UNP Q64PD9 EXPRESSION TAG SEQADV 3W5W HIS A 350 UNP Q64PD9 EXPRESSION TAG SEQADV 3W5W HIS A 351 UNP Q64PD9 EXPRESSION TAG SEQRES 1 A 351 MET LEU THR LYS VAL ILE ALA GLN ALA HIS ILE ASP HIS SEQRES 2 A 351 PHE THR LYS TRP PHE GLU ARG ALA ASP LYS ILE VAL ILE SEQRES 3 A 351 VAL SER HIS VAL SER PRO ASP GLY ASP ALA ILE GLY SER SEQRES 4 A 351 SER LEU GLY LEU TYR HIS PHE LEU ASP SER GLN ASP LYS SEQRES 5 A 351 ILE VAL ASN VAL ILE VAL PRO ASN ALA PHE PRO ASP PHE SEQRES 6 A 351 LEU LYS TRP MET PRO GLY SER LYS ASP ILE LEU LEU TYR SEQRES 7 A 351 ASP ARG TYR GLN GLU PHE ALA ASP LYS LEU ILE MET GLU SEQRES 8 A 351 ALA ASP VAL ILE CYS CYS LEU ASP PHE ASN ALA LEU LYS SEQRES 9 A 351 ARG ILE ASP GLU MET SER ASP ILE VAL ALA ALA SER PRO SEQRES 10 A 351 GLY ARG LYS ILE MET ILE ASP HIS HIS LEU TYR PRO GLU SEQRES 11 A 351 ASP PHE CYS ARG ILE THR ILE SER HIS PRO GLU ILE SER SEQRES 12 A 351 SER THR SER GLU LEU VAL PHE ARG LEU ILE CYS ARG MET SEQRES 13 A 351 GLY TYR PHE SER ASP ILE SER LYS GLU GLY ALA GLU CYS SEQRES 14 A 351 ILE TYR THR GLY MET MET THR ASP THR GLY GLY PHE THR SEQRES 15 A 351 TYR ASN SER ASN ASN ARG GLU ILE TYR PHE ILE ILE SER SEQRES 16 A 351 GLU LEU LEU SER LYS GLY ILE ASP LYS ASP ASP ILE TYR SEQRES 17 A 351 ARG LYS VAL TYR ASN THR TYR SER GLU SER ARG LEU ARG SEQRES 18 A 351 LEU MET GLY TYR VAL LEU SER ASN MET LYS VAL TYR LYS SEQRES 19 A 351 ASP TYR ASN SER ALA LEU ILE SER LEU THR LYS GLU GLU SEQRES 20 A 351 GLN GLY LYS PHE ASP TYR ILE LYS GLY ASP SER GLU GLY SEQRES 21 A 351 PHE VAL ASN ILE PRO LEU SER ILE LYS ASN VAL CYS PHE SEQRES 22 A 351 SER CYS PHE LEU ARG GLU ASP THR GLU LYS LYS MET ILE SEQRES 23 A 351 LYS ILE SER LEU ARG SER VAL GLY LYS PHE PRO CYS ASN SEQRES 24 A 351 ARG LEU ALA ALA GLU PHE PHE ASN GLY GLY GLY HIS LEU SEQRES 25 A 351 ASN ALA SER GLY GLY GLU PHE TYR GLY THR MET GLU GLU SEQRES 26 A 351 ALA VAL LYS VAL PHE GLU GLN ALA LEU GLU LYS TYR LYS SEQRES 27 A 351 PRO LEU LEU LYS GLU LEU GLU HIS HIS HIS HIS HIS HIS HET 5GP A 401 24 HET MN A 402 1 HET MN A 403 1 HETNAM 5GP GUANOSINE-5'-MONOPHOSPHATE HETNAM MN MANGANESE (II) ION FORMUL 2 5GP C10 H14 N5 O8 P FORMUL 3 MN 2(MN 2+) FORMUL 5 HOH *44(H2 O) HELIX 1 1 ALA A 7 ALA A 21 1 15 HELIX 2 2 ASP A 33 GLN A 50 1 18 HELIX 3 3 PRO A 63 LYS A 67 5 5 HELIX 4 4 GLY A 71 ILE A 75 5 5 HELIX 5 5 TYR A 78 ALA A 92 1 15 HELIX 6 6 ALA A 102 ASP A 107 5 6 HELIX 7 7 MET A 109 SER A 116 1 8 HELIX 8 8 SER A 144 MET A 156 1 13 HELIX 9 9 TYR A 158 ILE A 162 5 5 HELIX 10 10 SER A 163 ASP A 177 1 15 HELIX 11 11 ASN A 187 SER A 199 1 13 HELIX 12 12 ASP A 203 ASN A 213 1 11 HELIX 13 13 SER A 216 MET A 230 1 15 HELIX 14 14 LYS A 234 TYR A 236 5 3 HELIX 15 15 THR A 244 PHE A 251 1 8 HELIX 16 16 ASN A 263 ILE A 268 5 6 HELIX 17 17 PRO A 297 GLU A 304 1 8 HELIX 18 18 THR A 322 LYS A 338 1 17 SHEET 1 A 6 LEU A 76 LEU A 77 0 SHEET 2 A 6 ILE A 53 VAL A 58 1 N VAL A 56 O LEU A 76 SHEET 3 A 6 LYS A 23 SER A 28 1 N ILE A 24 O ILE A 53 SHEET 4 A 6 VAL A 94 LEU A 98 1 O CYS A 96 N VAL A 27 SHEET 5 A 6 ARG A 119 ASP A 124 1 O ILE A 121 N CYS A 97 SHEET 6 A 6 ILE A 135 SER A 138 1 O ILE A 137 N MET A 122 SHEET 1 B 6 LYS A 231 TYR A 233 0 SHEET 2 B 6 SER A 238 LEU A 243 -1 O LEU A 240 N LYS A 231 SHEET 3 B 6 PHE A 273 GLU A 279 1 O CYS A 275 N ALA A 239 SHEET 4 B 6 ILE A 286 SER A 292 -1 O ARG A 291 N SER A 274 SHEET 5 B 6 ALA A 314 PHE A 319 -1 O SER A 315 N LEU A 290 SHEET 6 B 6 GLY A 309 GLY A 310 -1 N GLY A 309 O GLY A 316 LINK NE2 HIS A 29 MN MN A 402 1555 1555 2.63 LINK OD1 ASP A 33 MN MN A 402 1555 1555 2.25 LINK OD2 ASP A 35 MN MN A 403 1555 1555 2.17 LINK OD2 ASP A 99 MN MN A 402 1555 1555 2.26 LINK OD1 ASP A 99 MN MN A 403 1555 1555 2.23 LINK NE2 HIS A 125 MN MN A 403 1555 1555 2.28 LINK OD2 ASP A 177 MN MN A 403 1555 1555 2.23 SITE 1 AC1 9 ARG A 105 LYS A 287 SER A 289 ARG A 291 SITE 2 AC1 9 GLY A 308 GLY A 309 SER A 315 GLY A 316 SITE 3 AC1 9 GLY A 317 SITE 1 AC2 4 HIS A 29 ASP A 33 ASP A 99 MN A 403 SITE 1 AC3 5 ASP A 35 ASP A 99 HIS A 125 ASP A 177 SITE 2 AC3 5 MN A 402 CRYST1 90.828 90.828 107.878 90.00 90.00 120.00 P 32 2 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011010 0.006357 0.000000 0.00000 SCALE2 0.000000 0.012713 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009270 0.00000