HEADER PEPTIDE BINDING PROTEIN 18-APR-13 3W9Y TITLE CRYSTAL STRUCTURE OF THE HUMAN DLG1 GUANYLATE KINASE DOMAIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: DISKS LARGE HOMOLOG 1; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: GUANYLATE KINASE DOMAIN, UNP RESIDUES 734-926; COMPND 5 SYNONYM: SYNAPSE-ASSOCIATED PROTEIN 97, SAP-97, SAP97, HDLG; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: DLG1; SOURCE 6 EXPRESSION_SYSTEM: CELL-FREE SYNTHESIS; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PCR2.1-TOPO KEYWDS GUANYLATE KINASE, MOLECULAR SCAFFOLD, PEPTIDE BINDING, CELL MEMBRANE, KEYWDS 2 PEPTIDE BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR S.MORI,Y.TEZUKA,A.ARAKAWA,N.HANDA,M.SHIROUZU,T.AKIYAMA,S.YOKOYAMA REVDAT 3 06-DEC-23 3W9Y 1 REMARK REVDAT 2 08-NOV-23 3W9Y 1 SEQADV LINK REVDAT 1 26-JUN-13 3W9Y 0 JRNL AUTH S.MORI,Y.TEZUKA,A.ARAKAWA,N.HANDA,M.SHIROUZU,T.AKIYAMA, JRNL AUTH 2 S.YOKOYAMA JRNL TITL CRYSTAL STRUCTURE OF THE GUANYLATE KINASE DOMAIN FROM DISCS JRNL TITL 2 LARGE HOMOLOG 1 (DLG1/SAP97) JRNL REF BIOCHEM.BIOPHYS.RES.COMMUN. V. 435 334 2013 JRNL REFN ISSN 0006-291X JRNL PMID 23624197 JRNL DOI 10.1016/J.BBRC.2013.04.056 REMARK 2 REMARK 2 RESOLUTION. 2.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.8.1_1168) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.00 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 2.100 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.2 REMARK 3 NUMBER OF REFLECTIONS : 12188 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.215 REMARK 3 R VALUE (WORKING SET) : 0.209 REMARK 3 FREE R VALUE : 0.265 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.400 REMARK 3 FREE R VALUE TEST SET COUNT : 1262 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 48.1000 - 4.7400 1.00 1995 196 0.2090 0.2680 REMARK 3 2 4.7400 - 3.7700 1.00 1952 239 0.1620 0.2180 REMARK 3 3 3.7700 - 3.2900 1.00 1976 214 0.1740 0.2330 REMARK 3 4 3.2900 - 2.9900 0.99 1947 224 0.1960 0.2430 REMARK 3 5 2.9900 - 2.7800 0.99 1957 218 0.2210 0.2680 REMARK 3 6 2.7800 - 2.6100 0.98 1933 226 0.2300 0.3150 REMARK 3 7 2.6100 - 2.4800 0.98 1919 227 0.2560 0.3380 REMARK 3 8 2.4800 - 2.3700 0.98 1973 170 0.2720 0.3110 REMARK 3 9 2.3700 - 2.2800 0.96 1910 200 0.2990 0.3480 REMARK 3 10 2.2800 - 2.2000 0.95 1881 206 0.3210 0.3860 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.360 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 27.420 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 1464 REMARK 3 ANGLE : 1.001 1972 REMARK 3 CHIRALITY : 0.067 211 REMARK 3 PLANARITY : 0.004 257 REMARK 3 DIHEDRAL : 15.722 562 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 11 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN A AND (RESSEQ 734:753) REMARK 3 ORIGIN FOR THE GROUP (A): -19.9080 30.4772 2.3413 REMARK 3 T TENSOR REMARK 3 T11: 0.3721 T22: 0.3974 REMARK 3 T33: 0.3533 T12: -0.1135 REMARK 3 T13: -0.0187 T23: -0.0932 REMARK 3 L TENSOR REMARK 3 L11: 8.1529 L22: 4.7616 REMARK 3 L33: 2.5327 L12: 2.0900 REMARK 3 L13: -2.9263 L23: 1.7545 REMARK 3 S TENSOR REMARK 3 S11: 0.2448 S12: 0.4615 S13: 0.5257 REMARK 3 S21: -0.5017 S22: 0.2858 S23: 0.1326 REMARK 3 S31: -0.2767 S32: 0.5691 S33: -0.5541 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN A AND (RESSEQ 754:773) REMARK 3 ORIGIN FOR THE GROUP (A): -19.3043 19.4787 -4.1745 REMARK 3 T TENSOR REMARK 3 T11: 0.2850 T22: 0.5306 REMARK 3 T33: 0.3172 T12: -0.0747 REMARK 3 T13: -0.0115 T23: -0.0756 REMARK 3 L TENSOR REMARK 3 L11: 1.6511 L22: 2.4141 REMARK 3 L33: 1.6166 L12: 2.0331 REMARK 3 L13: 1.4171 L23: 1.0771 REMARK 3 S TENSOR REMARK 3 S11: 0.1855 S12: 0.2520 S13: 0.1732 REMARK 3 S21: 0.0232 S22: -0.0169 S23: 0.0306 REMARK 3 S31: 0.0130 S32: 0.7378 S33: -0.0448 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN A AND (RESSEQ 774:793) REMARK 3 ORIGIN FOR THE GROUP (A): -28.1263 9.3560 -6.4187 REMARK 3 T TENSOR REMARK 3 T11: 0.4624 T22: 0.3931 REMARK 3 T33: 0.3362 T12: 0.0698 REMARK 3 T13: -0.1065 T23: -0.0582 REMARK 3 L TENSOR REMARK 3 L11: 4.9757 L22: 3.8761 REMARK 3 L33: 6.7768 L12: -0.5901 REMARK 3 L13: -1.9999 L23: -0.7609 REMARK 3 S TENSOR REMARK 3 S11: 0.0626 S12: -0.0891 S13: -0.1751 REMARK 3 S21: -0.0492 S22: 0.2653 S23: -0.0048 REMARK 3 S31: 1.5034 S32: 0.2189 S33: -0.3391 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN A AND (RESSEQ 794:813) REMARK 3 ORIGIN FOR THE GROUP (A): -34.8558 15.0812 -0.5298 REMARK 3 T TENSOR REMARK 3 T11: 0.2444 T22: 0.4035 REMARK 3 T33: 0.2989 T12: -0.0760 REMARK 3 T13: -0.0177 T23: 0.0353 REMARK 3 L TENSOR REMARK 3 L11: 1.8857 L22: 1.8749 REMARK 3 L33: 8.3773 L12: -0.8962 REMARK 3 L13: 0.4292 L23: -1.2447 REMARK 3 S TENSOR REMARK 3 S11: 0.0381 S12: -0.2220 S13: -0.1754 REMARK 3 S21: -0.0339 S22: 0.2610 S23: 0.2083 REMARK 3 S31: 1.1117 S32: -0.6197 S33: -0.1725 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN A AND (RESSEQ 814:833) REMARK 3 ORIGIN FOR THE GROUP (A): -20.2205 19.0985 5.4154 REMARK 3 T TENSOR REMARK 3 T11: 0.2089 T22: 0.4110 REMARK 3 T33: 0.2915 T12: 0.0425 REMARK 3 T13: 0.0011 T23: -0.0461 REMARK 3 L TENSOR REMARK 3 L11: 8.7476 L22: 5.7009 REMARK 3 L33: 4.5087 L12: 3.5889 REMARK 3 L13: 0.5337 L23: 1.2052 REMARK 3 S TENSOR REMARK 3 S11: -0.3011 S12: -0.5140 S13: -0.3921 REMARK 3 S21: -0.1395 S22: 0.2684 S23: -0.8634 REMARK 3 S31: 0.4364 S32: 0.6232 S33: 0.0925 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN A AND (RESSEQ 834:853) REMARK 3 ORIGIN FOR THE GROUP (A): -27.1119 27.6320 10.7337 REMARK 3 T TENSOR REMARK 3 T11: 0.3012 T22: 0.5586 REMARK 3 T33: 0.3851 T12: 0.0339 REMARK 3 T13: 0.0358 T23: -0.0488 REMARK 3 L TENSOR REMARK 3 L11: 4.8196 L22: 4.2552 REMARK 3 L33: 2.0861 L12: 2.4544 REMARK 3 L13: -0.2650 L23: -0.1115 REMARK 3 S TENSOR REMARK 3 S11: 0.0232 S12: -0.3457 S13: 0.8000 REMARK 3 S21: 0.1695 S22: 0.2097 S23: 0.6216 REMARK 3 S31: -0.0866 S32: -0.0950 S33: -0.1822 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN A AND (RESSEQ 854:881) REMARK 3 ORIGIN FOR THE GROUP (A): -32.7060 44.2730 -0.6371 REMARK 3 T TENSOR REMARK 3 T11: 0.6578 T22: 0.6795 REMARK 3 T33: 1.5135 T12: 0.1536 REMARK 3 T13: 0.0141 T23: 0.3249 REMARK 3 L TENSOR REMARK 3 L11: 3.6758 L22: 3.9138 REMARK 3 L33: 2.0926 L12: 3.7517 REMARK 3 L13: 1.8927 L23: 2.2888 REMARK 3 S TENSOR REMARK 3 S11: 0.1359 S12: 0.7058 S13: 2.2727 REMARK 3 S21: -1.5067 S22: 0.0967 S23: 2.4438 REMARK 3 S31: -0.6674 S32: -1.2148 S33: 0.0695 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN A AND (RESSEQ 882:891) REMARK 3 ORIGIN FOR THE GROUP (A): -32.3029 35.9866 10.5080 REMARK 3 T TENSOR REMARK 3 T11: 0.4531 T22: 0.9220 REMARK 3 T33: 1.0509 T12: 0.0875 REMARK 3 T13: 0.0646 T23: -0.3687 REMARK 3 L TENSOR REMARK 3 L11: 4.4348 L22: 1.3118 REMARK 3 L33: 6.0200 L12: 0.2309 REMARK 3 L13: 3.0849 L23: -2.0670 REMARK 3 S TENSOR REMARK 3 S11: -0.1655 S12: -1.2465 S13: 0.7310 REMARK 3 S21: 0.5201 S22: 0.0381 S23: 1.6228 REMARK 3 S31: -1.0276 S32: -2.4372 S33: 0.0155 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN A AND (RESSEQ 892:901) REMARK 3 ORIGIN FOR THE GROUP (A): -18.8108 44.0993 2.3245 REMARK 3 T TENSOR REMARK 3 T11: 0.8078 T22: 0.6485 REMARK 3 T33: 1.0059 T12: -0.1724 REMARK 3 T13: 0.1847 T23: -0.0583 REMARK 3 L TENSOR REMARK 3 L11: 5.6708 L22: 3.4150 REMARK 3 L33: 9.0731 L12: -0.4104 REMARK 3 L13: -5.5256 L23: 0.4728 REMARK 3 S TENSOR REMARK 3 S11: 1.5607 S12: 0.0280 S13: 2.3487 REMARK 3 S21: -0.2783 S22: -0.1996 S23: 0.3486 REMARK 3 S31: -2.2900 S32: 0.6864 S33: -1.1568 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN A AND (RESSEQ 902:911) REMARK 3 ORIGIN FOR THE GROUP (A): -13.6585 37.4187 6.0898 REMARK 3 T TENSOR REMARK 3 T11: 0.3426 T22: 0.5863 REMARK 3 T33: 0.5753 T12: -0.1575 REMARK 3 T13: -0.0193 T23: -0.0845 REMARK 3 L TENSOR REMARK 3 L11: 2.4508 L22: 6.0881 REMARK 3 L33: 4.8738 L12: -2.9585 REMARK 3 L13: 0.7182 L23: -2.3586 REMARK 3 S TENSOR REMARK 3 S11: -0.5355 S12: -0.0798 S13: 1.5506 REMARK 3 S21: -0.1689 S22: -0.0960 S23: -0.7408 REMARK 3 S31: -0.8713 S32: 0.9212 S33: 0.3860 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN A AND (RESSEQ 912:926) REMARK 3 ORIGIN FOR THE GROUP (A): -3.1120 32.3805 10.0075 REMARK 3 T TENSOR REMARK 3 T11: 0.2882 T22: 0.3875 REMARK 3 T33: 0.2873 T12: 0.0488 REMARK 3 T13: 0.0064 T23: -0.0886 REMARK 3 L TENSOR REMARK 3 L11: 3.8298 L22: 5.5801 REMARK 3 L33: 7.2105 L12: 3.9819 REMARK 3 L13: -3.3542 L23: -1.4999 REMARK 3 S TENSOR REMARK 3 S11: 0.4233 S12: 0.0779 S13: -0.6021 REMARK 3 S21: -0.1129 S22: -0.5883 S23: -0.3854 REMARK 3 S31: 0.0927 S32: -1.1917 S33: 0.1531 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: THE STRUCTURE HAS ALSO BEEN REFINED REMARK 3 USING THE PROGRAM CNS 1.3. REMARK 4 REMARK 4 3W9Y COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 07-MAY-13. REMARK 100 THE DEPOSITION ID IS D_1000096071. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 22-APR-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SPRING-8 REMARK 200 BEAMLINE : BL26B2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979077 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 12192 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.200 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.2 REMARK 200 DATA REDUNDANCY : 12.00 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.07700 REMARK 200 FOR THE DATA SET : 25.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.28 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.6 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.40900 REMARK 200 FOR SHELL : 2.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MR-SAD REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 1JXO REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.56 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.39 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2M SODIUM THIOCYANATE, 22% PEG 3350, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 65 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/6 REMARK 290 6555 X-Y,X,Z+5/6 REMARK 290 7555 Y,X,-Z+2/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+1/3 REMARK 290 10555 -Y,-X,-Z+1/6 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+5/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 120.37533 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 60.18767 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 90.28150 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 30.09383 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 150.46917 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 120.37533 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 60.18767 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 30.09383 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 90.28150 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 150.46917 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 727 REMARK 465 SER A 728 REMARK 465 SER A 729 REMARK 465 GLY A 730 REMARK 465 SER A 731 REMARK 465 SER A 732 REMARK 465 GLY A 733 REMARK 465 GLU A 858 REMARK 465 ASN A 859 REMARK 465 ILE A 860 REMARK 465 MSE A 861 REMARK 465 GLU A 862 REMARK 465 MSE A 863 REMARK 465 ASN A 864 REMARK 465 LYS A 865 REMARK 465 ARG A 866 REMARK 465 LEU A 867 REMARK 465 THR A 868 REMARK 465 GLU A 869 REMARK 465 GLU A 870 REMARK 465 GLN A 871 REMARK 465 ALA A 872 REMARK 465 ARG A 873 REMARK 465 LYS A 874 REMARK 465 THR A 875 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 MSE A 745 -0.12 82.82 REMARK 500 ALA A 843 4.58 -69.96 REMARK 500 LEU A 845 75.61 -117.18 REMARK 500 LYS A 855 34.51 -99.70 REMARK 500 REMARK 500 REMARK: NULL REMARK 999 REMARK 999 SEQUENCE REMARK 999 THIS SEQUENCE CORRESPONDS TO THE ISOFORM 2 FOUND IN UNP Q12959. DBREF 3W9Y A 734 926 UNP Q12959-2 DLG1_HUMAN 712 904 SEQADV 3W9Y GLY A 727 UNP Q12959-2 EXPRESSION TAG SEQADV 3W9Y SER A 728 UNP Q12959-2 EXPRESSION TAG SEQADV 3W9Y SER A 729 UNP Q12959-2 EXPRESSION TAG SEQADV 3W9Y GLY A 730 UNP Q12959-2 EXPRESSION TAG SEQADV 3W9Y SER A 731 UNP Q12959-2 EXPRESSION TAG SEQADV 3W9Y SER A 732 UNP Q12959-2 EXPRESSION TAG SEQADV 3W9Y GLY A 733 UNP Q12959-2 EXPRESSION TAG SEQRES 1 A 200 GLY SER SER GLY SER SER GLY ASN TYR THR ARG PRO VAL SEQRES 2 A 200 ILE ILE LEU GLY PRO MSE LYS ASP ARG ILE ASN ASP ASP SEQRES 3 A 200 LEU ILE SER GLU PHE PRO ASP LYS PHE GLY SER CYS VAL SEQRES 4 A 200 PRO HIS THR THR ARG PRO LYS ARG ASP TYR GLU VAL ASP SEQRES 5 A 200 GLY ARG ASP TYR HIS PHE VAL THR SER ARG GLU GLN MSE SEQRES 6 A 200 GLU LYS ASP ILE GLN GLU HIS LYS PHE ILE GLU ALA GLY SEQRES 7 A 200 GLN TYR ASN ASN HIS LEU TYR GLY THR SER VAL GLN SER SEQRES 8 A 200 VAL ARG GLU VAL ALA GLU LYS GLY LYS HIS CYS ILE LEU SEQRES 9 A 200 ASP VAL SER GLY ASN ALA ILE LYS ARG LEU GLN ILE ALA SEQRES 10 A 200 GLN LEU TYR PRO ILE SER ILE PHE ILE LYS PRO LYS SER SEQRES 11 A 200 MSE GLU ASN ILE MSE GLU MSE ASN LYS ARG LEU THR GLU SEQRES 12 A 200 GLU GLN ALA ARG LYS THR PHE GLU ARG ALA MSE LYS LEU SEQRES 13 A 200 GLU GLN GLU PHE THR GLU HIS PHE THR ALA ILE VAL GLN SEQRES 14 A 200 GLY ASP THR LEU GLU ASP ILE TYR ASN GLN VAL LYS GLN SEQRES 15 A 200 ILE ILE GLU GLU GLN SER GLY SER TYR ILE TRP VAL PRO SEQRES 16 A 200 ALA LYS GLU LYS LEU MODRES 3W9Y MSE A 745 MET SELENOMETHIONINE MODRES 3W9Y MSE A 791 MET SELENOMETHIONINE MODRES 3W9Y MSE A 857 MET SELENOMETHIONINE MODRES 3W9Y MSE A 880 MET SELENOMETHIONINE HET MSE A 745 8 HET MSE A 791 8 HET MSE A 857 8 HET MSE A 880 8 HETNAM MSE SELENOMETHIONINE FORMUL 1 MSE 4(C5 H11 N O2 SE) FORMUL 2 HOH *61(H2 O) HELIX 1 1 MSE A 745 PHE A 757 1 13 HELIX 2 2 SER A 787 GLU A 797 1 11 HELIX 3 3 VAL A 815 GLU A 823 1 9 HELIX 4 4 GLY A 834 ALA A 843 1 10 HELIX 5 5 GLU A 877 THR A 887 1 11 HELIX 6 6 GLU A 888 PHE A 890 5 3 HELIX 7 7 THR A 898 GLY A 915 1 18 HELIX 8 8 PRO A 921 LYS A 925 5 5 SHEET 1 A 5 PHE A 761 GLY A 762 0 SHEET 2 A 5 HIS A 827 LEU A 830 1 O ILE A 829 N GLY A 762 SHEET 3 A 5 VAL A 739 LEU A 742 1 N VAL A 739 O CYS A 828 SHEET 4 A 5 ILE A 848 ILE A 852 1 O ILE A 850 N LEU A 742 SHEET 5 A 5 ALA A 892 VAL A 894 1 O ALA A 892 N PHE A 851 SHEET 1 B 4 HIS A 783 PHE A 784 0 SHEET 2 B 4 HIS A 767 THR A 768 1 N THR A 768 O HIS A 783 SHEET 3 B 4 HIS A 809 SER A 814 -1 O GLY A 812 N HIS A 767 SHEET 4 B 4 PHE A 800 TYR A 806 -1 N GLU A 802 O THR A 813 LINK C PRO A 744 N MSE A 745 1555 1555 1.34 LINK C MSE A 745 N LYS A 746 1555 1555 1.33 LINK C GLN A 790 N MSE A 791 1555 1555 1.33 LINK C MSE A 791 N GLU A 792 1555 1555 1.33 LINK C SER A 856 N MSE A 857 1555 1555 1.33 LINK C ALA A 879 N MSE A 880 1555 1555 1.33 LINK C MSE A 880 N LYS A 881 1555 1555 1.33 CRYST1 65.535 65.535 180.563 90.00 90.00 120.00 P 65 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015259 0.008810 0.000000 0.00000 SCALE2 0.000000 0.017620 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005538 0.00000