HEADER METAL BINDING PROTEIN 02-MAY-13 3WAE TITLE X-RAY STRUCTURE OF FE(III)-BICARBONATES-TTFBPA, A FERRIC ION-BINDING TITLE 2 PROTEIN FROM THERMUS THERMOPHILUS HB8 COMPND MOL_ID: 1; COMPND 2 MOLECULE: IRON ABC TRANSPORTER, PERIPLASMIC IRON-BINDING PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: THERMUS THERMOPHILUS; SOURCE 3 ORGANISM_TAXID: 274; SOURCE 4 STRAIN: HB8; SOURCE 5 GENE: TTHA1628; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PRSFDUET-1 VECTOR KEYWDS A FERRIC BINDING PROTEIN, FERRIC ION, METAL BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR S.WANG,M.OGATA,S.HORITA,J.OHTSUKA,K.NAGATA,M.TANOKURA REVDAT 2 20-MAR-24 3WAE 1 REMARK LINK REVDAT 1 21-MAY-14 3WAE 0 JRNL AUTH S.WANG,M.OGATA,S.HORITA,J.OHTSUKA,K.NAGATA,M.TANOKURA JRNL TITL A NOVEL MODE OF FERRIC ION COORDINATION BY THE PERIPLASMIC JRNL TITL 2 FERRIC ION-BINDING SUBUNIT FBPA OF AN ABC-TYPE IRON JRNL TITL 3 TRANSPORTER FROM THERMUS THERMOPHILUS HB8. JRNL REF ACTA CRYSTALLOGR.,SECT.D V. 70 196 2014 JRNL REFN ISSN 0907-4449 JRNL PMID 24419392 JRNL DOI 10.1107/S1399004713026333 REMARK 2 REMARK 2 RESOLUTION. 1.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.0 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.98 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 58159 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.203 REMARK 3 R VALUE (WORKING SET) : 0.201 REMARK 3 FREE R VALUE : 0.243 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 3103 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.70 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.74 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3954 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.3000 REMARK 3 BIN FREE R VALUE SET COUNT : 203 REMARK 3 BIN FREE R VALUE : 0.3600 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4785 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 18 REMARK 3 SOLVENT ATOMS : 513 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 16.62 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.08000 REMARK 3 B22 (A**2) : -0.03000 REMARK 3 B33 (A**2) : -0.06000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.133 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.127 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.086 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.574 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.947 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.924 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4941 ; 0.009 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 6720 ; 1.292 ; 1.998 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 629 ; 5.280 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 204 ;36.495 ;22.745 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 837 ;14.344 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 46 ;14.830 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 765 ; 0.079 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3736 ; 0.006 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN USED IF PRESENT IN REMARK 3 THE INPUT REMARK 4 REMARK 4 3WAE COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 16-MAY-13. REMARK 100 THE DEPOSITION ID IS D_1000096087. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 08-JUL-11; 04-NOV-11 REMARK 200 TEMPERATURE (KELVIN) : 100; 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 2 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y; Y REMARK 200 RADIATION SOURCE : SPRING-8; PHOTON FACTORY REMARK 200 BEAMLINE : BL32XU; AR-NE3A REMARK 200 X-RAY GENERATOR MODEL : NULL; NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M; M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0000; 1.7209 REMARK 200 MONOCHROMATOR : NULL; NULL REMARK 200 OPTICS : NULL; NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD; CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD; ADSC REMARK 200 QUANTUM 270 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDSME REMARK 200 DATA SCALING SOFTWARE : XDSME REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 62381 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.700 REMARK 200 RESOLUTION RANGE LOW (A) : 45.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH; SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 34.80 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.89 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M BIS-TRIS (PH 5.5), 0.2M SODIUM REMARK 280 CHLORIDE, 25% PEG 3350, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 20.08500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 67.30500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 50.51000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 67.30500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 20.08500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 50.51000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3260 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 24150 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -29.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 MET A 2 REMARK 465 LYS A 3 REMARK 465 ARG A 4 REMARK 465 TYR A 5 REMARK 465 LEU A 6 REMARK 465 LEU A 7 REMARK 465 THR A 8 REMARK 465 LEU A 9 REMARK 465 ALA A 10 REMARK 465 ALA A 11 REMARK 465 PHE A 12 REMARK 465 ALA A 13 REMARK 465 ALA A 14 REMARK 465 LEU A 15 REMARK 465 GLY A 16 REMARK 465 ALA A 17 REMARK 465 LEU A 18 REMARK 465 ALA A 19 REMARK 465 GLN A 20 REMARK 465 SER A 21 REMARK 465 MET B 1 REMARK 465 MET B 2 REMARK 465 LYS B 3 REMARK 465 ARG B 4 REMARK 465 TYR B 5 REMARK 465 LEU B 6 REMARK 465 LEU B 7 REMARK 465 THR B 8 REMARK 465 LEU B 9 REMARK 465 ALA B 10 REMARK 465 ALA B 11 REMARK 465 PHE B 12 REMARK 465 ALA B 13 REMARK 465 ALA B 14 REMARK 465 LEU B 15 REMARK 465 GLY B 16 REMARK 465 ALA B 17 REMARK 465 LEU B 18 REMARK 465 ALA B 19 REMARK 465 GLN B 20 REMARK 465 SER B 21 REMARK 465 PRO B 22 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 53 NE - CZ - NH1 ANGL. DEV. = 3.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 296 8.01 59.63 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FE A 401 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 TYR A 162 OH REMARK 620 2 TYR A 219 OH 98.3 REMARK 620 3 TYR A 220 OH 96.5 116.3 REMARK 620 4 BCT A 402 O3 85.8 85.6 157.2 REMARK 620 5 BCT A 403 O3 163.6 93.3 88.7 83.6 REMARK 620 6 HOH A 677 O 86.2 160.6 81.6 75.9 79.2 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FE B 401 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 TYR B 162 OH REMARK 620 2 TYR B 219 OH 100.0 REMARK 620 3 TYR B 220 OH 94.8 118.8 REMARK 620 4 BCT B 402 O1 94.6 80.9 156.2 REMARK 620 5 BCT B 403 O1 164.6 91.9 87.8 77.6 REMARK 620 6 HOH B 681 O 84.0 152.9 87.2 72.1 81.0 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FE A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BCT A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BCT A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FE B 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BCT B 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BCT B 403 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3WAF RELATED DB: PDB DBREF 3WAE A 1 330 UNP Q5SHV2 Q5SHV2_THET8 1 330 DBREF 3WAE B 1 330 UNP Q5SHV2 Q5SHV2_THET8 1 330 SEQRES 1 A 330 MET MET LYS ARG TYR LEU LEU THR LEU ALA ALA PHE ALA SEQRES 2 A 330 ALA LEU GLY ALA LEU ALA GLN SER PRO THR LEU THR ILE SEQRES 3 A 330 TYR SER GLY ARG GLY GLN SER LEU VAL GLU PRO LEU VAL SEQRES 4 A 330 LYS GLN PHE GLU ALA GLU THR GLY ILE ARG VAL GLN VAL SEQRES 5 A 330 ARG TYR SER THR ASP ALA GLN ILE LEU ALA ALA LEU GLN SEQRES 6 A 330 GLU GLU GLY SER ARG SER PRO ALA ASP LEU PHE TRP ALA SEQRES 7 A 330 ASN THR ALA GLY ALA LEU GLY GLN ALA SER ALA LYS GLY SEQRES 8 A 330 LEU LEU ARG PRO LEU GLY GLU THR LEU LEU GLU LYS PRO SEQRES 9 A 330 ILE ALA PHE VAL PRO ALA SER ARG THR TRP VAL PRO VAL SEQRES 10 A 330 THR VAL ARG LEU ARG VAL LEU ALA TYR ASN PRO ASP ARG SEQRES 11 A 330 ILE LYS ALA GLU GLU LEU PRO GLU SER LEU LEU ASP LEU SEQRES 12 A 330 PRO ARG PHE ALA ARG GLU LYS GLY LEU VAL GLY ARG VAL SEQRES 13 A 330 GLY TRP THR PRO THR TYR SER SER PHE GLN ASP MET VAL SEQRES 14 A 330 ALA GLY MET ILE ALA LEU TYR GLY GLU GLU LYS THR ARG SEQRES 15 A 330 GLU TRP LEU LEU ALA MET LYS ALA LEU ALA PRO LYS ALA SEQRES 16 A 330 TYR PRO SER ASN PRO ALA MET LEU ASP ALA ILE ARG ALA SEQRES 17 A 330 GLY GLU VAL ASP LEU GLY SER THR ASN HIS TYR TYR VAL SEQRES 18 A 330 VAL ARG PHE ARG ARG ALA GLY TYR ARG LEU GLY MET HIS SEQRES 19 A 330 HIS PHE ARG ASP GLY ASP ALA GLY ASN LEU ALA LEU VAL SEQRES 20 A 330 THR GLY ALA GLY LEU LEU LYS THR SER LYS ASN LEU ALA SEQRES 21 A 330 ALA ALA THR ARG PHE LEU THR TYR LEU LEU SER PRO GLN SEQRES 22 A 330 ALA GLN GLN TYR PHE VAL GLY ASN ILE GLY GLU TYR PRO SEQRES 23 A 330 LEU VAL LYS GLY VAL ALA LEU ASP PRO ASN LEU LEU PRO SEQRES 24 A 330 LEU GLU GLU ALA LEU ALA LYS SER PRO LYS LEU ASP LEU SEQRES 25 A 330 GLU LYS LEU PRO LEU ASP ARG ALA LEU ARG LEU LEU ARG SEQRES 26 A 330 GLU THR GLY VAL LEU SEQRES 1 B 330 MET MET LYS ARG TYR LEU LEU THR LEU ALA ALA PHE ALA SEQRES 2 B 330 ALA LEU GLY ALA LEU ALA GLN SER PRO THR LEU THR ILE SEQRES 3 B 330 TYR SER GLY ARG GLY GLN SER LEU VAL GLU PRO LEU VAL SEQRES 4 B 330 LYS GLN PHE GLU ALA GLU THR GLY ILE ARG VAL GLN VAL SEQRES 5 B 330 ARG TYR SER THR ASP ALA GLN ILE LEU ALA ALA LEU GLN SEQRES 6 B 330 GLU GLU GLY SER ARG SER PRO ALA ASP LEU PHE TRP ALA SEQRES 7 B 330 ASN THR ALA GLY ALA LEU GLY GLN ALA SER ALA LYS GLY SEQRES 8 B 330 LEU LEU ARG PRO LEU GLY GLU THR LEU LEU GLU LYS PRO SEQRES 9 B 330 ILE ALA PHE VAL PRO ALA SER ARG THR TRP VAL PRO VAL SEQRES 10 B 330 THR VAL ARG LEU ARG VAL LEU ALA TYR ASN PRO ASP ARG SEQRES 11 B 330 ILE LYS ALA GLU GLU LEU PRO GLU SER LEU LEU ASP LEU SEQRES 12 B 330 PRO ARG PHE ALA ARG GLU LYS GLY LEU VAL GLY ARG VAL SEQRES 13 B 330 GLY TRP THR PRO THR TYR SER SER PHE GLN ASP MET VAL SEQRES 14 B 330 ALA GLY MET ILE ALA LEU TYR GLY GLU GLU LYS THR ARG SEQRES 15 B 330 GLU TRP LEU LEU ALA MET LYS ALA LEU ALA PRO LYS ALA SEQRES 16 B 330 TYR PRO SER ASN PRO ALA MET LEU ASP ALA ILE ARG ALA SEQRES 17 B 330 GLY GLU VAL ASP LEU GLY SER THR ASN HIS TYR TYR VAL SEQRES 18 B 330 VAL ARG PHE ARG ARG ALA GLY TYR ARG LEU GLY MET HIS SEQRES 19 B 330 HIS PHE ARG ASP GLY ASP ALA GLY ASN LEU ALA LEU VAL SEQRES 20 B 330 THR GLY ALA GLY LEU LEU LYS THR SER LYS ASN LEU ALA SEQRES 21 B 330 ALA ALA THR ARG PHE LEU THR TYR LEU LEU SER PRO GLN SEQRES 22 B 330 ALA GLN GLN TYR PHE VAL GLY ASN ILE GLY GLU TYR PRO SEQRES 23 B 330 LEU VAL LYS GLY VAL ALA LEU ASP PRO ASN LEU LEU PRO SEQRES 24 B 330 LEU GLU GLU ALA LEU ALA LYS SER PRO LYS LEU ASP LEU SEQRES 25 B 330 GLU LYS LEU PRO LEU ASP ARG ALA LEU ARG LEU LEU ARG SEQRES 26 B 330 GLU THR GLY VAL LEU HET FE A 401 1 HET BCT A 402 4 HET BCT A 403 4 HET FE B 401 1 HET BCT B 402 4 HET BCT B 403 4 HETNAM FE FE (III) ION HETNAM BCT BICARBONATE ION FORMUL 3 FE 2(FE 3+) FORMUL 4 BCT 4(C H O3 1-) FORMUL 9 HOH *513(H2 O) HELIX 1 1 GLY A 31 GLY A 47 1 17 HELIX 2 2 THR A 56 GLN A 65 1 10 HELIX 3 3 THR A 80 LYS A 90 1 11 HELIX 4 4 GLY A 97 GLU A 102 1 6 HELIX 5 5 LYS A 132 LEU A 136 5 5 HELIX 6 6 SER A 139 LEU A 141 5 3 HELIX 7 7 ASP A 142 GLY A 151 1 10 HELIX 8 8 TYR A 162 GLY A 177 1 16 HELIX 9 9 GLY A 177 ALA A 190 1 14 HELIX 10 10 SER A 198 GLY A 209 1 12 HELIX 11 11 HIS A 218 ALA A 227 1 10 HELIX 12 12 ASP A 240 ASN A 243 5 4 HELIX 13 13 ASN A 258 LEU A 270 1 13 HELIX 14 14 SER A 271 ASN A 281 1 11 HELIX 15 15 PRO A 299 SER A 307 1 9 HELIX 16 16 ASP A 311 LEU A 315 5 5 HELIX 17 17 PRO A 316 THR A 327 1 12 HELIX 18 18 GLY B 31 GLY B 47 1 17 HELIX 19 19 THR B 56 GLY B 68 1 13 HELIX 20 20 SER B 69 SER B 71 5 3 HELIX 21 21 THR B 80 LYS B 90 1 11 HELIX 22 22 GLY B 97 GLU B 102 1 6 HELIX 23 23 LYS B 132 LEU B 136 5 5 HELIX 24 24 SER B 139 LEU B 141 5 3 HELIX 25 25 ASP B 142 LYS B 150 1 9 HELIX 26 26 TYR B 162 GLY B 177 1 16 HELIX 27 27 GLY B 177 ALA B 190 1 14 HELIX 28 28 SER B 198 ALA B 208 1 11 HELIX 29 29 HIS B 218 ALA B 227 1 10 HELIX 30 30 ASP B 240 ASN B 243 5 4 HELIX 31 31 ASN B 258 LEU B 270 1 13 HELIX 32 32 SER B 271 ASN B 281 1 11 HELIX 33 33 PRO B 299 SER B 307 1 9 HELIX 34 34 ASP B 311 LEU B 315 5 5 HELIX 35 35 PRO B 316 THR B 327 1 12 SHEET 1 A 8 ARG A 49 TYR A 54 0 SHEET 2 A 8 THR A 23 SER A 28 1 N LEU A 24 O GLN A 51 SHEET 3 A 8 LEU A 75 ALA A 78 1 O LEU A 75 N TYR A 27 SHEET 4 A 8 ALA A 245 LEU A 252 -1 O GLY A 251 N PHE A 76 SHEET 5 A 8 VAL A 115 TYR A 126 -1 N ARG A 120 O LEU A 246 SHEET 6 A 8 LEU A 213 ASN A 217 -1 O GLY A 214 N ALA A 125 SHEET 7 A 8 VAL A 156 TRP A 158 1 N GLY A 157 O LEU A 213 SHEET 8 A 8 LYS A 194 ALA A 195 1 O LYS A 194 N VAL A 156 SHEET 1 B 6 ARG A 49 TYR A 54 0 SHEET 2 B 6 THR A 23 SER A 28 1 N LEU A 24 O GLN A 51 SHEET 3 B 6 LEU A 75 ALA A 78 1 O LEU A 75 N TYR A 27 SHEET 4 B 6 ALA A 245 LEU A 252 -1 O GLY A 251 N PHE A 76 SHEET 5 B 6 VAL A 115 TYR A 126 -1 N ARG A 120 O LEU A 246 SHEET 6 B 6 GLY A 232 HIS A 234 -1 O GLY A 232 N TYR A 126 SHEET 1 C 8 VAL B 50 TYR B 54 0 SHEET 2 C 8 LEU B 24 SER B 28 1 N LEU B 24 O GLN B 51 SHEET 3 C 8 LEU B 75 ALA B 78 1 O LEU B 75 N TYR B 27 SHEET 4 C 8 ALA B 245 LEU B 252 -1 O GLY B 249 N ALA B 78 SHEET 5 C 8 VAL B 115 TYR B 126 -1 N ARG B 120 O LEU B 246 SHEET 6 C 8 LEU B 213 ASN B 217 -1 O GLY B 214 N ALA B 125 SHEET 7 C 8 VAL B 156 TRP B 158 1 N GLY B 157 O LEU B 213 SHEET 8 C 8 LYS B 194 ALA B 195 1 O LYS B 194 N VAL B 156 SHEET 1 D 6 VAL B 50 TYR B 54 0 SHEET 2 D 6 LEU B 24 SER B 28 1 N LEU B 24 O GLN B 51 SHEET 3 D 6 LEU B 75 ALA B 78 1 O LEU B 75 N TYR B 27 SHEET 4 D 6 ALA B 245 LEU B 252 -1 O GLY B 249 N ALA B 78 SHEET 5 D 6 VAL B 115 TYR B 126 -1 N ARG B 120 O LEU B 246 SHEET 6 D 6 GLY B 232 HIS B 234 -1 O GLY B 232 N TYR B 126 LINK OH TYR A 162 FE FE A 401 1555 1555 1.96 LINK OH TYR A 219 FE FE A 401 1555 1555 1.94 LINK OH TYR A 220 FE FE A 401 1555 1555 2.02 LINK FE FE A 401 O3 BCT A 402 1555 1555 2.22 LINK FE FE A 401 O3 BCT A 403 1555 1555 2.13 LINK FE FE A 401 O HOH A 677 1555 1555 2.41 LINK OH TYR B 162 FE FE B 401 1555 1555 1.90 LINK OH TYR B 219 FE FE B 401 1555 1555 1.98 LINK OH TYR B 220 FE FE B 401 1555 1555 2.08 LINK FE FE B 401 O1 BCT B 402 1555 1555 2.12 LINK FE FE B 401 O1 BCT B 403 1555 1555 2.08 LINK FE FE B 401 O HOH B 681 1555 1555 2.53 SITE 1 AC1 6 TYR A 162 TYR A 219 TYR A 220 BCT A 402 SITE 2 AC1 6 BCT A 403 HOH A 677 SITE 1 AC2 10 ARG A 30 ASN A 79 ARG A 120 TYR A 162 SITE 2 AC2 10 TYR A 219 FE A 401 BCT A 403 HOH A 532 SITE 3 AC2 10 HOH A 677 HOH A 678 SITE 1 AC3 7 TYR A 219 TYR A 220 ARG A 223 FE A 401 SITE 2 AC3 7 BCT A 402 HOH A 529 HOH A 677 SITE 1 AC4 6 TYR B 162 TYR B 219 TYR B 220 BCT B 402 SITE 2 AC4 6 BCT B 403 HOH B 681 SITE 1 AC5 10 ARG B 30 ASN B 79 ARG B 120 TYR B 162 SITE 2 AC5 10 TYR B 219 FE B 401 BCT B 403 HOH B 590 SITE 3 AC5 10 HOH B 680 HOH B 681 SITE 1 AC6 8 TYR B 219 TYR B 220 ARG B 223 FE B 401 SITE 2 AC6 8 BCT B 402 HOH B 582 HOH B 681 HOH B 753 CRYST1 40.170 101.020 134.610 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.024894 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009899 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007429 0.00000