data_3WBP # _entry.id 3WBP # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.398 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3WBP pdb_00003wbp 10.2210/pdb3wbp/pdb RCSB RCSB096133 ? ? WWPDB D_1000096133 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2013-12-25 2 'Structure model' 1 1 2014-04-09 3 'Structure model' 1 2 2017-11-22 4 'Structure model' 1 3 2022-08-24 5 'Structure model' 1 4 2023-11-08 6 'Structure model' 1 5 2024-10-30 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Refinement description' 3 4 'Structure model' 'Database references' 4 4 'Structure model' 'Derived calculations' 5 5 'Structure model' 'Data collection' 6 5 'Structure model' 'Refinement description' 7 6 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' software 2 4 'Structure model' citation 3 4 'Structure model' database_2 4 4 'Structure model' struct_ref_seq_dif 5 4 'Structure model' struct_site 6 5 'Structure model' chem_comp_atom 7 5 'Structure model' chem_comp_bond 8 5 'Structure model' pdbx_initial_refinement_model 9 6 'Structure model' pdbx_entry_details 10 6 'Structure model' pdbx_modification_feature # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_software.name' 2 4 'Structure model' '_citation.journal_volume' 3 4 'Structure model' '_citation.page_first' 4 4 'Structure model' '_citation.page_last' 5 4 'Structure model' '_citation.title' 6 4 'Structure model' '_citation.year' 7 4 'Structure model' '_database_2.pdbx_DOI' 8 4 'Structure model' '_database_2.pdbx_database_accession' 9 4 'Structure model' '_struct_ref_seq_dif.details' 10 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 11 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 12 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3WBP _pdbx_database_status.recvd_initial_deposition_date 2013-05-20 _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 3WBQ . unspecified PDB 3WBR . unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Nagae, M.' 1 'Ikeda, A.' 2 'Kitago, Y.' 3 'Matsumoto, N.' 4 'Yamamoto, K.' 5 'Yamaguchi, Y.' 6 # _citation.id primary _citation.title ;Crystal structures of carbohydrate recognition domain of blood dendritic cell antigen-2 (BDCA2) reveal a common domain-swapped dimer. ; _citation.journal_abbrev Proteins _citation.journal_volume 82 _citation.page_first 1512 _citation.page_last 1518 _citation.year 2014 _citation.journal_id_ASTM PSFGEY _citation.country US _citation.journal_id_ISSN 1097-0134 _citation.journal_id_CSD 0867 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 24425442 _citation.pdbx_database_id_DOI 10.1002/prot.24504 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Nagae, M.' 1 ? primary 'Ikeda, A.' 2 ? primary 'Kitago, Y.' 3 ? primary 'Matsumoto, N.' 4 ? primary 'Yamamoto, K.' 5 ? primary 'Yamaguchi, Y.' 6 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'C-type lectin domain family 4 member C' 18089.225 2 ? ? 'UNP residues 83-210' ? 2 non-polymer syn 1,2-ETHANEDIOL 62.068 2 ? ? ? ? 3 water nat water 18.015 24 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Blood dendritic cell antigen 2, BDCA-2, C-type lectin superfamily member 7, Dendritic lectin' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MNHKVHHHHHHIEGRHMENLYFQGSCPTPWTSFQSSCYFISTGMQSWTKSQKNCSVMGADLVVINTREEQDFIIQNLKRN SSYFLGLSDPGGRRHWQWVDQTPYNENVTFWHSGEPNNLDERCAIINFRSSEEWGWNDIHCHVPQKSICKMKK ; _entity_poly.pdbx_seq_one_letter_code_can ;MNHKVHHHHHHIEGRHMENLYFQGSCPTPWTSFQSSCYFISTGMQSWTKSQKNCSVMGADLVVINTREEQDFIIQNLKRN SSYFLGLSDPGGRRHWQWVDQTPYNENVTFWHSGEPNNLDERCAIINFRSSEEWGWNDIHCHVPQKSICKMKK ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 1,2-ETHANEDIOL EDO 3 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 ASN n 1 3 HIS n 1 4 LYS n 1 5 VAL n 1 6 HIS n 1 7 HIS n 1 8 HIS n 1 9 HIS n 1 10 HIS n 1 11 HIS n 1 12 ILE n 1 13 GLU n 1 14 GLY n 1 15 ARG n 1 16 HIS n 1 17 MET n 1 18 GLU n 1 19 ASN n 1 20 LEU n 1 21 TYR n 1 22 PHE n 1 23 GLN n 1 24 GLY n 1 25 SER n 1 26 CYS n 1 27 PRO n 1 28 THR n 1 29 PRO n 1 30 TRP n 1 31 THR n 1 32 SER n 1 33 PHE n 1 34 GLN n 1 35 SER n 1 36 SER n 1 37 CYS n 1 38 TYR n 1 39 PHE n 1 40 ILE n 1 41 SER n 1 42 THR n 1 43 GLY n 1 44 MET n 1 45 GLN n 1 46 SER n 1 47 TRP n 1 48 THR n 1 49 LYS n 1 50 SER n 1 51 GLN n 1 52 LYS n 1 53 ASN n 1 54 CYS n 1 55 SER n 1 56 VAL n 1 57 MET n 1 58 GLY n 1 59 ALA n 1 60 ASP n 1 61 LEU n 1 62 VAL n 1 63 VAL n 1 64 ILE n 1 65 ASN n 1 66 THR n 1 67 ARG n 1 68 GLU n 1 69 GLU n 1 70 GLN n 1 71 ASP n 1 72 PHE n 1 73 ILE n 1 74 ILE n 1 75 GLN n 1 76 ASN n 1 77 LEU n 1 78 LYS n 1 79 ARG n 1 80 ASN n 1 81 SER n 1 82 SER n 1 83 TYR n 1 84 PHE n 1 85 LEU n 1 86 GLY n 1 87 LEU n 1 88 SER n 1 89 ASP n 1 90 PRO n 1 91 GLY n 1 92 GLY n 1 93 ARG n 1 94 ARG n 1 95 HIS n 1 96 TRP n 1 97 GLN n 1 98 TRP n 1 99 VAL n 1 100 ASP n 1 101 GLN n 1 102 THR n 1 103 PRO n 1 104 TYR n 1 105 ASN n 1 106 GLU n 1 107 ASN n 1 108 VAL n 1 109 THR n 1 110 PHE n 1 111 TRP n 1 112 HIS n 1 113 SER n 1 114 GLY n 1 115 GLU n 1 116 PRO n 1 117 ASN n 1 118 ASN n 1 119 LEU n 1 120 ASP n 1 121 GLU n 1 122 ARG n 1 123 CYS n 1 124 ALA n 1 125 ILE n 1 126 ILE n 1 127 ASN n 1 128 PHE n 1 129 ARG n 1 130 SER n 1 131 SER n 1 132 GLU n 1 133 GLU n 1 134 TRP n 1 135 GLY n 1 136 TRP n 1 137 ASN n 1 138 ASP n 1 139 ILE n 1 140 HIS n 1 141 CYS n 1 142 HIS n 1 143 VAL n 1 144 PRO n 1 145 GLN n 1 146 LYS n 1 147 SER n 1 148 ILE n 1 149 CYS n 1 150 LYS n 1 151 MET n 1 152 LYS n 1 153 LYS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene BDCA2 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'Rosetta2 (DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name 'pCold-TEV vector' _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 EDO non-polymer . 1,2-ETHANEDIOL 'ETHYLENE GLYCOL' 'C2 H6 O2' 62.068 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 58 ? ? ? A . n A 1 2 ASN 2 59 ? ? ? A . n A 1 3 HIS 3 60 ? ? ? A . n A 1 4 LYS 4 61 ? ? ? A . n A 1 5 VAL 5 62 ? ? ? A . n A 1 6 HIS 6 63 ? ? ? A . n A 1 7 HIS 7 64 ? ? ? A . n A 1 8 HIS 8 65 ? ? ? A . n A 1 9 HIS 9 66 ? ? ? A . n A 1 10 HIS 10 67 ? ? ? A . n A 1 11 HIS 11 68 ? ? ? A . n A 1 12 ILE 12 69 ? ? ? A . n A 1 13 GLU 13 70 ? ? ? A . n A 1 14 GLY 14 71 ? ? ? A . n A 1 15 ARG 15 72 ? ? ? A . n A 1 16 HIS 16 73 ? ? ? A . n A 1 17 MET 17 74 ? ? ? A . n A 1 18 GLU 18 75 ? ? ? A . n A 1 19 ASN 19 76 ? ? ? A . n A 1 20 LEU 20 77 ? ? ? A . n A 1 21 TYR 21 78 ? ? ? A . n A 1 22 PHE 22 79 ? ? ? A . n A 1 23 GLN 23 80 ? ? ? A . n A 1 24 GLY 24 81 ? ? ? A . n A 1 25 SER 25 82 82 SER SER A . n A 1 26 CYS 26 83 83 CYS CYS A . n A 1 27 PRO 27 84 84 PRO PRO A . n A 1 28 THR 28 85 85 THR THR A . n A 1 29 PRO 29 86 86 PRO PRO A . n A 1 30 TRP 30 87 87 TRP TRP A . n A 1 31 THR 31 88 88 THR THR A . n A 1 32 SER 32 89 89 SER SER A . n A 1 33 PHE 33 90 90 PHE PHE A . n A 1 34 GLN 34 91 91 GLN GLN A . n A 1 35 SER 35 92 92 SER SER A . n A 1 36 SER 36 93 93 SER SER A . n A 1 37 CYS 37 94 94 CYS CYS A . n A 1 38 TYR 38 95 95 TYR TYR A . n A 1 39 PHE 39 96 96 PHE PHE A . n A 1 40 ILE 40 97 97 ILE ILE A . n A 1 41 SER 41 98 98 SER SER A . n A 1 42 THR 42 99 99 THR THR A . n A 1 43 GLY 43 100 100 GLY GLY A . n A 1 44 MET 44 101 101 MET MET A . n A 1 45 GLN 45 102 102 GLN GLN A . n A 1 46 SER 46 103 103 SER SER A . n A 1 47 TRP 47 104 104 TRP TRP A . n A 1 48 THR 48 105 105 THR THR A . n A 1 49 LYS 49 106 106 LYS LYS A . n A 1 50 SER 50 107 107 SER SER A . n A 1 51 GLN 51 108 108 GLN GLN A . n A 1 52 LYS 52 109 109 LYS LYS A . n A 1 53 ASN 53 110 110 ASN ASN A . n A 1 54 CYS 54 111 111 CYS CYS A . n A 1 55 SER 55 112 112 SER SER A . n A 1 56 VAL 56 113 113 VAL VAL A . n A 1 57 MET 57 114 114 MET MET A . n A 1 58 GLY 58 115 115 GLY GLY A . n A 1 59 ALA 59 116 116 ALA ALA A . n A 1 60 ASP 60 117 117 ASP ASP A . n A 1 61 LEU 61 118 118 LEU LEU A . n A 1 62 VAL 62 119 119 VAL VAL A . n A 1 63 VAL 63 120 120 VAL VAL A . n A 1 64 ILE 64 121 121 ILE ILE A . n A 1 65 ASN 65 122 122 ASN ASN A . n A 1 66 THR 66 123 123 THR THR A . n A 1 67 ARG 67 124 124 ARG ARG A . n A 1 68 GLU 68 125 125 GLU GLU A . n A 1 69 GLU 69 126 126 GLU GLU A . n A 1 70 GLN 70 127 127 GLN GLN A . n A 1 71 ASP 71 128 128 ASP ASP A . n A 1 72 PHE 72 129 129 PHE PHE A . n A 1 73 ILE 73 130 130 ILE ILE A . n A 1 74 ILE 74 131 131 ILE ILE A . n A 1 75 GLN 75 132 132 GLN GLN A . n A 1 76 ASN 76 133 133 ASN ASN A . n A 1 77 LEU 77 134 134 LEU LEU A . n A 1 78 LYS 78 135 135 LYS LYS A . n A 1 79 ARG 79 136 136 ARG ARG A . n A 1 80 ASN 80 137 137 ASN ASN A . n A 1 81 SER 81 138 138 SER SER A . n A 1 82 SER 82 139 139 SER SER A . n A 1 83 TYR 83 140 140 TYR TYR A . n A 1 84 PHE 84 141 141 PHE PHE A . n A 1 85 LEU 85 142 142 LEU LEU A . n A 1 86 GLY 86 143 143 GLY GLY A . n A 1 87 LEU 87 144 144 LEU LEU A . n A 1 88 SER 88 145 145 SER SER A . n A 1 89 ASP 89 146 146 ASP ASP A . n A 1 90 PRO 90 147 147 PRO PRO A . n A 1 91 GLY 91 148 148 GLY GLY A . n A 1 92 GLY 92 149 149 GLY GLY A . n A 1 93 ARG 93 150 150 ARG ARG A . n A 1 94 ARG 94 151 151 ARG ARG A . n A 1 95 HIS 95 152 152 HIS HIS A . n A 1 96 TRP 96 153 153 TRP TRP A . n A 1 97 GLN 97 154 154 GLN GLN A . n A 1 98 TRP 98 155 155 TRP TRP A . n A 1 99 VAL 99 156 156 VAL VAL A . n A 1 100 ASP 100 157 157 ASP ASP A . n A 1 101 GLN 101 158 158 GLN GLN A . n A 1 102 THR 102 159 159 THR THR A . n A 1 103 PRO 103 160 160 PRO PRO A . n A 1 104 TYR 104 161 161 TYR TYR A . n A 1 105 ASN 105 162 162 ASN ASN A . n A 1 106 GLU 106 163 163 GLU GLU A . n A 1 107 ASN 107 164 164 ASN ASN A . n A 1 108 VAL 108 165 165 VAL VAL A . n A 1 109 THR 109 166 166 THR THR A . n A 1 110 PHE 110 167 167 PHE PHE A . n A 1 111 TRP 111 168 168 TRP TRP A . n A 1 112 HIS 112 169 169 HIS HIS A . n A 1 113 SER 113 170 170 SER SER A . n A 1 114 GLY 114 171 171 GLY GLY A . n A 1 115 GLU 115 172 172 GLU GLU A . n A 1 116 PRO 116 173 173 PRO PRO A . n A 1 117 ASN 117 174 174 ASN ASN A . n A 1 118 ASN 118 175 175 ASN ASN A . n A 1 119 LEU 119 176 176 LEU LEU A . n A 1 120 ASP 120 177 177 ASP ASP A . n A 1 121 GLU 121 178 178 GLU GLU A . n A 1 122 ARG 122 179 179 ARG ARG A . n A 1 123 CYS 123 180 180 CYS CYS A . n A 1 124 ALA 124 181 181 ALA ALA A . n A 1 125 ILE 125 182 182 ILE ILE A . n A 1 126 ILE 126 183 183 ILE ILE A . n A 1 127 ASN 127 184 184 ASN ASN A . n A 1 128 PHE 128 185 185 PHE PHE A . n A 1 129 ARG 129 186 186 ARG ARG A . n A 1 130 SER 130 187 187 SER SER A . n A 1 131 SER 131 188 188 SER SER A . n A 1 132 GLU 132 189 ? ? ? A . n A 1 133 GLU 133 190 190 GLU GLU A . n A 1 134 TRP 134 191 191 TRP TRP A . n A 1 135 GLY 135 192 192 GLY GLY A . n A 1 136 TRP 136 193 193 TRP TRP A . n A 1 137 ASN 137 194 194 ASN ASN A . n A 1 138 ASP 138 195 195 ASP ASP A . n A 1 139 ILE 139 196 196 ILE ILE A . n A 1 140 HIS 140 197 197 HIS HIS A . n A 1 141 CYS 141 198 198 CYS CYS A . n A 1 142 HIS 142 199 199 HIS HIS A . n A 1 143 VAL 143 200 200 VAL VAL A . n A 1 144 PRO 144 201 201 PRO PRO A . n A 1 145 GLN 145 202 202 GLN GLN A . n A 1 146 LYS 146 203 203 LYS LYS A . n A 1 147 SER 147 204 204 SER SER A . n A 1 148 ILE 148 205 205 ILE ILE A . n A 1 149 CYS 149 206 206 CYS CYS A . n A 1 150 LYS 150 207 207 LYS LYS A . n A 1 151 MET 151 208 208 MET MET A . n A 1 152 LYS 152 209 209 LYS LYS A . n A 1 153 LYS 153 210 210 LYS LYS A . n B 1 1 MET 1 58 ? ? ? B . n B 1 2 ASN 2 59 ? ? ? B . n B 1 3 HIS 3 60 ? ? ? B . n B 1 4 LYS 4 61 ? ? ? B . n B 1 5 VAL 5 62 ? ? ? B . n B 1 6 HIS 6 63 ? ? ? B . n B 1 7 HIS 7 64 ? ? ? B . n B 1 8 HIS 8 65 ? ? ? B . n B 1 9 HIS 9 66 ? ? ? B . n B 1 10 HIS 10 67 ? ? ? B . n B 1 11 HIS 11 68 ? ? ? B . n B 1 12 ILE 12 69 ? ? ? B . n B 1 13 GLU 13 70 ? ? ? B . n B 1 14 GLY 14 71 ? ? ? B . n B 1 15 ARG 15 72 ? ? ? B . n B 1 16 HIS 16 73 ? ? ? B . n B 1 17 MET 17 74 ? ? ? B . n B 1 18 GLU 18 75 ? ? ? B . n B 1 19 ASN 19 76 ? ? ? B . n B 1 20 LEU 20 77 ? ? ? B . n B 1 21 TYR 21 78 ? ? ? B . n B 1 22 PHE 22 79 ? ? ? B . n B 1 23 GLN 23 80 ? ? ? B . n B 1 24 GLY 24 81 ? ? ? B . n B 1 25 SER 25 82 82 SER SER B . n B 1 26 CYS 26 83 83 CYS CYS B . n B 1 27 PRO 27 84 84 PRO PRO B . n B 1 28 THR 28 85 85 THR THR B . n B 1 29 PRO 29 86 86 PRO PRO B . n B 1 30 TRP 30 87 87 TRP TRP B . n B 1 31 THR 31 88 88 THR THR B . n B 1 32 SER 32 89 89 SER SER B . n B 1 33 PHE 33 90 90 PHE PHE B . n B 1 34 GLN 34 91 91 GLN GLN B . n B 1 35 SER 35 92 92 SER SER B . n B 1 36 SER 36 93 93 SER SER B . n B 1 37 CYS 37 94 94 CYS CYS B . n B 1 38 TYR 38 95 95 TYR TYR B . n B 1 39 PHE 39 96 96 PHE PHE B . n B 1 40 ILE 40 97 97 ILE ILE B . n B 1 41 SER 41 98 98 SER SER B . n B 1 42 THR 42 99 99 THR THR B . n B 1 43 GLY 43 100 100 GLY GLY B . n B 1 44 MET 44 101 101 MET MET B . n B 1 45 GLN 45 102 102 GLN GLN B . n B 1 46 SER 46 103 103 SER SER B . n B 1 47 TRP 47 104 104 TRP TRP B . n B 1 48 THR 48 105 105 THR THR B . n B 1 49 LYS 49 106 106 LYS LYS B . n B 1 50 SER 50 107 107 SER SER B . n B 1 51 GLN 51 108 108 GLN GLN B . n B 1 52 LYS 52 109 109 LYS LYS B . n B 1 53 ASN 53 110 110 ASN ASN B . n B 1 54 CYS 54 111 111 CYS CYS B . n B 1 55 SER 55 112 112 SER SER B . n B 1 56 VAL 56 113 113 VAL VAL B . n B 1 57 MET 57 114 114 MET MET B . n B 1 58 GLY 58 115 115 GLY GLY B . n B 1 59 ALA 59 116 116 ALA ALA B . n B 1 60 ASP 60 117 117 ASP ASP B . n B 1 61 LEU 61 118 118 LEU LEU B . n B 1 62 VAL 62 119 119 VAL VAL B . n B 1 63 VAL 63 120 120 VAL VAL B . n B 1 64 ILE 64 121 121 ILE ILE B . n B 1 65 ASN 65 122 122 ASN ASN B . n B 1 66 THR 66 123 123 THR THR B . n B 1 67 ARG 67 124 124 ARG ARG B . n B 1 68 GLU 68 125 125 GLU GLU B . n B 1 69 GLU 69 126 126 GLU GLU B . n B 1 70 GLN 70 127 127 GLN GLN B . n B 1 71 ASP 71 128 128 ASP ASP B . n B 1 72 PHE 72 129 129 PHE PHE B . n B 1 73 ILE 73 130 130 ILE ILE B . n B 1 74 ILE 74 131 131 ILE ILE B . n B 1 75 GLN 75 132 132 GLN GLN B . n B 1 76 ASN 76 133 133 ASN ASN B . n B 1 77 LEU 77 134 134 LEU LEU B . n B 1 78 LYS 78 135 135 LYS LYS B . n B 1 79 ARG 79 136 136 ARG ARG B . n B 1 80 ASN 80 137 137 ASN ASN B . n B 1 81 SER 81 138 138 SER SER B . n B 1 82 SER 82 139 139 SER SER B . n B 1 83 TYR 83 140 140 TYR TYR B . n B 1 84 PHE 84 141 141 PHE PHE B . n B 1 85 LEU 85 142 142 LEU LEU B . n B 1 86 GLY 86 143 143 GLY GLY B . n B 1 87 LEU 87 144 144 LEU LEU B . n B 1 88 SER 88 145 145 SER SER B . n B 1 89 ASP 89 146 146 ASP ASP B . n B 1 90 PRO 90 147 147 PRO PRO B . n B 1 91 GLY 91 148 148 GLY GLY B . n B 1 92 GLY 92 149 149 GLY GLY B . n B 1 93 ARG 93 150 150 ARG ARG B . n B 1 94 ARG 94 151 151 ARG ARG B . n B 1 95 HIS 95 152 152 HIS HIS B . n B 1 96 TRP 96 153 153 TRP TRP B . n B 1 97 GLN 97 154 154 GLN GLN B . n B 1 98 TRP 98 155 155 TRP TRP B . n B 1 99 VAL 99 156 156 VAL VAL B . n B 1 100 ASP 100 157 157 ASP ASP B . n B 1 101 GLN 101 158 158 GLN GLN B . n B 1 102 THR 102 159 159 THR THR B . n B 1 103 PRO 103 160 160 PRO PRO B . n B 1 104 TYR 104 161 161 TYR TYR B . n B 1 105 ASN 105 162 162 ASN ASN B . n B 1 106 GLU 106 163 163 GLU GLU B . n B 1 107 ASN 107 164 164 ASN ASN B . n B 1 108 VAL 108 165 165 VAL VAL B . n B 1 109 THR 109 166 166 THR THR B . n B 1 110 PHE 110 167 167 PHE PHE B . n B 1 111 TRP 111 168 168 TRP TRP B . n B 1 112 HIS 112 169 169 HIS HIS B . n B 1 113 SER 113 170 170 SER SER B . n B 1 114 GLY 114 171 171 GLY GLY B . n B 1 115 GLU 115 172 172 GLU GLU B . n B 1 116 PRO 116 173 173 PRO PRO B . n B 1 117 ASN 117 174 174 ASN ASN B . n B 1 118 ASN 118 175 175 ASN ASN B . n B 1 119 LEU 119 176 176 LEU LEU B . n B 1 120 ASP 120 177 177 ASP ASP B . n B 1 121 GLU 121 178 178 GLU GLU B . n B 1 122 ARG 122 179 179 ARG ARG B . n B 1 123 CYS 123 180 180 CYS CYS B . n B 1 124 ALA 124 181 181 ALA ALA B . n B 1 125 ILE 125 182 182 ILE ILE B . n B 1 126 ILE 126 183 183 ILE ILE B . n B 1 127 ASN 127 184 184 ASN ASN B . n B 1 128 PHE 128 185 185 PHE PHE B . n B 1 129 ARG 129 186 186 ARG ARG B . n B 1 130 SER 130 187 187 SER SER B . n B 1 131 SER 131 188 ? ? ? B . n B 1 132 GLU 132 189 ? ? ? B . n B 1 133 GLU 133 190 190 GLU GLU B . n B 1 134 TRP 134 191 191 TRP TRP B . n B 1 135 GLY 135 192 192 GLY GLY B . n B 1 136 TRP 136 193 193 TRP TRP B . n B 1 137 ASN 137 194 194 ASN ASN B . n B 1 138 ASP 138 195 195 ASP ASP B . n B 1 139 ILE 139 196 196 ILE ILE B . n B 1 140 HIS 140 197 197 HIS HIS B . n B 1 141 CYS 141 198 198 CYS CYS B . n B 1 142 HIS 142 199 199 HIS HIS B . n B 1 143 VAL 143 200 200 VAL VAL B . n B 1 144 PRO 144 201 201 PRO PRO B . n B 1 145 GLN 145 202 202 GLN GLN B . n B 1 146 LYS 146 203 203 LYS LYS B . n B 1 147 SER 147 204 204 SER SER B . n B 1 148 ILE 148 205 205 ILE ILE B . n B 1 149 CYS 149 206 206 CYS CYS B . n B 1 150 LYS 150 207 207 LYS LYS B . n B 1 151 MET 151 208 208 MET MET B . n B 1 152 LYS 152 209 209 LYS LYS B . n B 1 153 LYS 153 210 210 LYS LYS B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 EDO 1 1001 1001 EDO EDO A . D 2 EDO 1 301 1002 EDO EDO B . E 3 HOH 1 1101 1 HOH HOH A . E 3 HOH 2 1102 2 HOH HOH A . E 3 HOH 3 1103 3 HOH HOH A . E 3 HOH 4 1104 4 HOH HOH A . E 3 HOH 5 1105 5 HOH HOH A . E 3 HOH 6 1106 6 HOH HOH A . E 3 HOH 7 1107 16 HOH HOH A . E 3 HOH 8 1108 19 HOH HOH A . E 3 HOH 9 1109 20 HOH HOH A . E 3 HOH 10 1110 21 HOH HOH A . E 3 HOH 11 1111 22 HOH HOH A . E 3 HOH 12 1112 24 HOH HOH A . F 3 HOH 1 401 7 HOH HOH B . F 3 HOH 2 402 8 HOH HOH B . F 3 HOH 3 403 9 HOH HOH B . F 3 HOH 4 404 10 HOH HOH B . F 3 HOH 5 405 11 HOH HOH B . F 3 HOH 6 406 12 HOH HOH B . F 3 HOH 7 407 13 HOH HOH B . F 3 HOH 8 408 14 HOH HOH B . F 3 HOH 9 409 15 HOH HOH B . F 3 HOH 10 410 17 HOH HOH B . F 3 HOH 11 411 18 HOH HOH B . F 3 HOH 12 412 23 HOH HOH B . # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal SERGUI 'data collection' . ? 1 MOLREP phasing . ? 2 REFMAC refinement 5.6.0117 ? 3 HKL-2000 'data reduction' . ? 4 HKL-2000 'data scaling' . ? 5 # _cell.entry_id 3WBP _cell.length_a 82.115 _cell.length_b 82.115 _cell.length_c 44.732 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3WBP _symmetry.space_group_name_H-M 'P 42' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 77 _symmetry.space_group_name_Hall ? # _exptl.entry_id 3WBP _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.08 _exptl_crystal.density_percent_sol 40.99 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.pdbx_details '0.1M HEPES, 1.5M lithium sulfate, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 293K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 95 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315r' _diffrn_detector.pdbx_collection_date 2011-11-07 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Numerical link type Si(111) double crystal monochromator, liquid nitrogen cooling' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.98 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'PHOTON FACTORY BEAMLINE BL-17A' _diffrn_source.pdbx_synchrotron_site 'Photon Factory' _diffrn_source.pdbx_synchrotron_beamline BL-17A _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.98 # _reflns.entry_id 3WBP _reflns.observed_criterion_sigma_I -3 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 100 _reflns.d_resolution_high 1.8 _reflns.number_obs 27881 _reflns.number_all ? _reflns.percent_possible_obs 99.6 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value 0.039 _reflns.pdbx_netI_over_sigmaI 56.3 _reflns.B_iso_Wilson_estimate 30.0 _reflns.pdbx_redundancy 7.3 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 1.8 _reflns_shell.d_res_low 1.83 _reflns_shell.percent_possible_all 100 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value 0.495 _reflns_shell.meanI_over_sigI_obs 5.0 _reflns_shell.pdbx_redundancy 7.4 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.number_possible ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.meanI_over_sigI_all ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 3WBP _refine.ls_number_reflns_obs 26467 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 82.11 _refine.ls_d_res_high 1.80 _refine.ls_percent_reflns_obs 99.60 _refine.ls_R_factor_obs 0.25512 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.25422 _refine.ls_R_factor_R_free 0.27219 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.0 _refine.ls_number_reflns_R_free 1403 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.938 _refine.correlation_coeff_Fo_to_Fc_free 0.931 _refine.B_iso_mean 38.388 _refine.aniso_B[1][1] -1.33 _refine.aniso_B[2][2] -1.33 _refine.aniso_B[3][3] 2.66 _refine.aniso_B[1][2] -0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] -0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN USED IF PRESENT IN THE INPUT' _refine.pdbx_starting_model 'PDB entry 3VYJ' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.160 _refine.pdbx_overall_ESU_R_Free 0.141 _refine.overall_SU_ML 0.109 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 3.488 _refine.overall_SU_R_Cruickshank_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2090 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 8 _refine_hist.number_atoms_solvent 24 _refine_hist.number_atoms_total 2122 _refine_hist.d_res_high 1.80 _refine_hist.d_res_low 82.11 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id r_bond_refined_d 0.007 0.020 ? 2164 ? 'X-RAY DIFFRACTION' r_bond_other_d ? ? ? ? ? 'X-RAY DIFFRACTION' r_angle_refined_deg 1.073 1.894 ? 2932 ? 'X-RAY DIFFRACTION' r_angle_other_deg ? ? ? ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_1_deg 5.720 5.000 ? 251 ? 'X-RAY DIFFRACTION' r_dihedral_angle_2_deg 34.393 24.286 ? 112 ? 'X-RAY DIFFRACTION' r_dihedral_angle_3_deg 13.838 15.000 ? 357 ? 'X-RAY DIFFRACTION' r_dihedral_angle_4_deg 18.515 15.000 ? 12 ? 'X-RAY DIFFRACTION' r_chiral_restr 0.082 0.200 ? 293 ? 'X-RAY DIFFRACTION' r_gen_planes_refined 0.004 0.021 ? 1672 ? 'X-RAY DIFFRACTION' r_gen_planes_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_nbd_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_nbd_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_nbtor_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_nbtor_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_xyhbond_nbd_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_xyhbond_nbd_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_metal_ion_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_metal_ion_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_vdw_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_vdw_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_hbond_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_hbond_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_metal_ion_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_metal_ion_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_mcbond_it ? ? ? ? ? 'X-RAY DIFFRACTION' r_mcbond_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_mcangle_it ? ? ? ? ? 'X-RAY DIFFRACTION' r_scbond_it ? ? ? ? ? 'X-RAY DIFFRACTION' r_scangle_it ? ? ? ? ? 'X-RAY DIFFRACTION' r_rigid_bond_restr ? ? ? ? ? 'X-RAY DIFFRACTION' r_sphericity_free ? ? ? ? ? 'X-RAY DIFFRACTION' r_sphericity_bonded ? ? ? ? ? 'X-RAY DIFFRACTION' # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.799 _refine_ls_shell.d_res_low 1.845 _refine_ls_shell.number_reflns_R_work 1865 _refine_ls_shell.R_factor_R_work 0.291 _refine_ls_shell.percent_reflns_obs 99.90 _refine_ls_shell.R_factor_R_free 0.287 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 101 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? # _database_PDB_matrix.entry_id 3WBP _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 3WBP _struct.title 'Crystal structure of carbohydrate recognition domain of Blood Dendritic Cell Antigen-2 (BDCA2) lectin (crystal form-1)' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3WBP _struct_keywords.pdbx_keywords 'Carbohydrate Binding Protein' _struct_keywords.text 'C-type lectin fold, immune receptor, complex-type N-glycan, Carbohydrate Binding Protein' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? E N N 3 ? F N N 3 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code CLC4C_HUMAN _struct_ref.pdbx_db_accession Q8WTT0 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;CPTPWTSFQSSCYFISTGMQSWTKSQKNCSVMGADLVVINTREEQDFIIQNLKRNSSYFLGLSDPGGRRHWQWVDQTPYN ENVTFWHSGEPNNLDERCAIINFRSSEEWGWNDIHCHVPQKSICKMKK ; _struct_ref.pdbx_align_begin 83 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3WBP A 26 ? 153 ? Q8WTT0 83 ? 210 ? 83 210 2 1 3WBP B 26 ? 153 ? Q8WTT0 83 ? 210 ? 83 210 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3WBP MET A 1 ? UNP Q8WTT0 ? ? 'expression tag' 58 1 1 3WBP ASN A 2 ? UNP Q8WTT0 ? ? 'expression tag' 59 2 1 3WBP HIS A 3 ? UNP Q8WTT0 ? ? 'expression tag' 60 3 1 3WBP LYS A 4 ? UNP Q8WTT0 ? ? 'expression tag' 61 4 1 3WBP VAL A 5 ? UNP Q8WTT0 ? ? 'expression tag' 62 5 1 3WBP HIS A 6 ? UNP Q8WTT0 ? ? 'expression tag' 63 6 1 3WBP HIS A 7 ? UNP Q8WTT0 ? ? 'expression tag' 64 7 1 3WBP HIS A 8 ? UNP Q8WTT0 ? ? 'expression tag' 65 8 1 3WBP HIS A 9 ? UNP Q8WTT0 ? ? 'expression tag' 66 9 1 3WBP HIS A 10 ? UNP Q8WTT0 ? ? 'expression tag' 67 10 1 3WBP HIS A 11 ? UNP Q8WTT0 ? ? 'expression tag' 68 11 1 3WBP ILE A 12 ? UNP Q8WTT0 ? ? 'expression tag' 69 12 1 3WBP GLU A 13 ? UNP Q8WTT0 ? ? 'expression tag' 70 13 1 3WBP GLY A 14 ? UNP Q8WTT0 ? ? 'expression tag' 71 14 1 3WBP ARG A 15 ? UNP Q8WTT0 ? ? 'expression tag' 72 15 1 3WBP HIS A 16 ? UNP Q8WTT0 ? ? 'expression tag' 73 16 1 3WBP MET A 17 ? UNP Q8WTT0 ? ? 'expression tag' 74 17 1 3WBP GLU A 18 ? UNP Q8WTT0 ? ? 'expression tag' 75 18 1 3WBP ASN A 19 ? UNP Q8WTT0 ? ? 'expression tag' 76 19 1 3WBP LEU A 20 ? UNP Q8WTT0 ? ? 'expression tag' 77 20 1 3WBP TYR A 21 ? UNP Q8WTT0 ? ? 'expression tag' 78 21 1 3WBP PHE A 22 ? UNP Q8WTT0 ? ? 'expression tag' 79 22 1 3WBP GLN A 23 ? UNP Q8WTT0 ? ? 'expression tag' 80 23 1 3WBP GLY A 24 ? UNP Q8WTT0 ? ? 'expression tag' 81 24 1 3WBP SER A 25 ? UNP Q8WTT0 ? ? 'expression tag' 82 25 2 3WBP MET B 1 ? UNP Q8WTT0 ? ? 'expression tag' 58 26 2 3WBP ASN B 2 ? UNP Q8WTT0 ? ? 'expression tag' 59 27 2 3WBP HIS B 3 ? UNP Q8WTT0 ? ? 'expression tag' 60 28 2 3WBP LYS B 4 ? UNP Q8WTT0 ? ? 'expression tag' 61 29 2 3WBP VAL B 5 ? UNP Q8WTT0 ? ? 'expression tag' 62 30 2 3WBP HIS B 6 ? UNP Q8WTT0 ? ? 'expression tag' 63 31 2 3WBP HIS B 7 ? UNP Q8WTT0 ? ? 'expression tag' 64 32 2 3WBP HIS B 8 ? UNP Q8WTT0 ? ? 'expression tag' 65 33 2 3WBP HIS B 9 ? UNP Q8WTT0 ? ? 'expression tag' 66 34 2 3WBP HIS B 10 ? UNP Q8WTT0 ? ? 'expression tag' 67 35 2 3WBP HIS B 11 ? UNP Q8WTT0 ? ? 'expression tag' 68 36 2 3WBP ILE B 12 ? UNP Q8WTT0 ? ? 'expression tag' 69 37 2 3WBP GLU B 13 ? UNP Q8WTT0 ? ? 'expression tag' 70 38 2 3WBP GLY B 14 ? UNP Q8WTT0 ? ? 'expression tag' 71 39 2 3WBP ARG B 15 ? UNP Q8WTT0 ? ? 'expression tag' 72 40 2 3WBP HIS B 16 ? UNP Q8WTT0 ? ? 'expression tag' 73 41 2 3WBP MET B 17 ? UNP Q8WTT0 ? ? 'expression tag' 74 42 2 3WBP GLU B 18 ? UNP Q8WTT0 ? ? 'expression tag' 75 43 2 3WBP ASN B 19 ? UNP Q8WTT0 ? ? 'expression tag' 76 44 2 3WBP LEU B 20 ? UNP Q8WTT0 ? ? 'expression tag' 77 45 2 3WBP TYR B 21 ? UNP Q8WTT0 ? ? 'expression tag' 78 46 2 3WBP PHE B 22 ? UNP Q8WTT0 ? ? 'expression tag' 79 47 2 3WBP GLN B 23 ? UNP Q8WTT0 ? ? 'expression tag' 80 48 2 3WBP GLY B 24 ? UNP Q8WTT0 ? ? 'expression tag' 81 49 2 3WBP SER B 25 ? UNP Q8WTT0 ? ? 'expression tag' 82 50 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 4100 ? 1 MORE -22 ? 1 'SSA (A^2)' 13820 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 46 ? VAL A 56 ? SER A 103 VAL A 113 1 ? 11 HELX_P HELX_P2 2 THR A 66 ? ASN A 76 ? THR A 123 ASN A 133 1 ? 11 HELX_P HELX_P3 3 ASN A 105 ? THR A 109 ? ASN A 162 THR A 166 5 ? 5 HELX_P HELX_P4 4 SER B 46 ? VAL B 56 ? SER B 103 VAL B 113 1 ? 11 HELX_P HELX_P5 5 THR B 66 ? ASN B 76 ? THR B 123 ASN B 133 1 ? 11 HELX_P HELX_P6 6 ASN B 105 ? THR B 109 ? ASN B 162 THR B 166 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 26 SG ? ? ? 1_555 A CYS 37 SG ? ? A CYS 83 A CYS 94 1_555 ? ? ? ? ? ? ? 2.026 ? ? disulf2 disulf ? ? A CYS 54 SG ? ? ? 1_555 A CYS 149 SG ? ? A CYS 111 A CYS 206 1_555 ? ? ? ? ? ? ? 2.034 ? ? disulf3 disulf ? ? A CYS 123 SG ? ? ? 1_555 A CYS 141 SG ? ? A CYS 180 A CYS 198 1_555 ? ? ? ? ? ? ? 2.061 ? ? disulf4 disulf ? ? B CYS 26 SG ? ? ? 1_555 B CYS 37 SG ? ? B CYS 83 B CYS 94 1_555 ? ? ? ? ? ? ? 2.024 ? ? disulf5 disulf ? ? B CYS 54 SG ? ? ? 1_555 B CYS 149 SG ? ? B CYS 111 B CYS 206 1_555 ? ? ? ? ? ? ? 2.036 ? ? disulf6 disulf ? ? B CYS 123 SG ? ? ? 1_555 B CYS 141 SG ? ? B CYS 180 B CYS 198 1_555 ? ? ? ? ? ? ? 2.055 ? ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _pdbx_modification_feature.ordinal _pdbx_modification_feature.label_comp_id _pdbx_modification_feature.label_asym_id _pdbx_modification_feature.label_seq_id _pdbx_modification_feature.label_alt_id _pdbx_modification_feature.modified_residue_label_comp_id _pdbx_modification_feature.modified_residue_label_asym_id _pdbx_modification_feature.modified_residue_label_seq_id _pdbx_modification_feature.modified_residue_label_alt_id _pdbx_modification_feature.auth_comp_id _pdbx_modification_feature.auth_asym_id _pdbx_modification_feature.auth_seq_id _pdbx_modification_feature.PDB_ins_code _pdbx_modification_feature.symmetry _pdbx_modification_feature.modified_residue_auth_comp_id _pdbx_modification_feature.modified_residue_auth_asym_id _pdbx_modification_feature.modified_residue_auth_seq_id _pdbx_modification_feature.modified_residue_PDB_ins_code _pdbx_modification_feature.modified_residue_symmetry _pdbx_modification_feature.comp_id_linking_atom _pdbx_modification_feature.modified_residue_id_linking_atom _pdbx_modification_feature.modified_residue_id _pdbx_modification_feature.ref_pcm_id _pdbx_modification_feature.ref_comp_id _pdbx_modification_feature.type _pdbx_modification_feature.category 1 CYS A 26 ? CYS A 37 ? CYS A 83 ? 1_555 CYS A 94 ? 1_555 SG SG . . . None 'Disulfide bridge' 2 CYS A 54 ? CYS A 149 ? CYS A 111 ? 1_555 CYS A 206 ? 1_555 SG SG . . . None 'Disulfide bridge' 3 CYS A 123 ? CYS A 141 ? CYS A 180 ? 1_555 CYS A 198 ? 1_555 SG SG . . . None 'Disulfide bridge' 4 CYS B 26 ? CYS B 37 ? CYS B 83 ? 1_555 CYS B 94 ? 1_555 SG SG . . . None 'Disulfide bridge' 5 CYS B 54 ? CYS B 149 ? CYS B 111 ? 1_555 CYS B 206 ? 1_555 SG SG . . . None 'Disulfide bridge' 6 CYS B 123 ? CYS B 141 ? CYS B 180 ? 1_555 CYS B 198 ? 1_555 SG SG . . . None 'Disulfide bridge' # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 GLU 115 A . ? GLU 172 A PRO 116 A ? PRO 173 A 1 -2.73 2 GLU 115 B . ? GLU 172 B PRO 116 B ? PRO 173 B 1 -2.08 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 4 ? B ? 6 ? C ? 4 ? D ? 6 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? parallel B 4 5 ? anti-parallel B 5 6 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel C 3 4 ? anti-parallel D 1 2 ? anti-parallel D 2 3 ? anti-parallel D 3 4 ? parallel D 4 5 ? anti-parallel D 5 6 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 THR A 31 ? PHE A 33 ? THR A 88 PHE A 90 A 2 SER A 36 ? ILE A 40 ? SER A 93 ILE A 97 A 3 LYS A 146 ? LYS A 152 ? LYS A 203 LYS A 209 A 4 ASP A 60 ? LEU A 61 ? ASP A 117 LEU A 118 B 1 THR A 31 ? PHE A 33 ? THR A 88 PHE A 90 B 2 SER A 36 ? ILE A 40 ? SER A 93 ILE A 97 B 3 LYS A 146 ? LYS A 152 ? LYS A 203 LYS A 209 B 4 TYR A 83 ? ASP A 89 ? TYR A 140 ASP A 146 B 5 ARG A 122 ? PHE A 128 ? ARG A 179 PHE A 185 B 6 TRP A 134 ? ILE A 139 ? TRP A 191 ILE A 196 C 1 THR B 31 ? PHE B 33 ? THR B 88 PHE B 90 C 2 SER B 36 ? ILE B 40 ? SER B 93 ILE B 97 C 3 LYS B 146 ? LYS B 152 ? LYS B 203 LYS B 209 C 4 ASP B 60 ? LEU B 61 ? ASP B 117 LEU B 118 D 1 THR B 31 ? PHE B 33 ? THR B 88 PHE B 90 D 2 SER B 36 ? ILE B 40 ? SER B 93 ILE B 97 D 3 LYS B 146 ? LYS B 152 ? LYS B 203 LYS B 209 D 4 TYR B 83 ? ASP B 89 ? TYR B 140 ASP B 146 D 5 ARG B 122 ? PHE B 128 ? ARG B 179 PHE B 185 D 6 TRP B 134 ? ILE B 139 ? TRP B 191 ILE B 196 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N THR A 31 ? N THR A 88 O TYR A 38 ? O TYR A 95 A 2 3 N CYS A 37 ? N CYS A 94 O MET A 151 ? O MET A 208 A 3 4 O LYS A 150 ? O LYS A 207 N ASP A 60 ? N ASP A 117 B 1 2 N THR A 31 ? N THR A 88 O TYR A 38 ? O TYR A 95 B 2 3 N CYS A 37 ? N CYS A 94 O MET A 151 ? O MET A 208 B 3 4 O LYS A 146 ? O LYS A 203 N PHE A 84 ? N PHE A 141 B 4 5 N ASP A 89 ? N ASP A 146 O ARG A 122 ? O ARG A 179 B 5 6 N ILE A 125 ? N ILE A 182 O ASN A 137 ? O ASN A 194 C 1 2 N THR B 31 ? N THR B 88 O TYR B 38 ? O TYR B 95 C 2 3 N CYS B 37 ? N CYS B 94 O MET B 151 ? O MET B 208 C 3 4 O LYS B 150 ? O LYS B 207 N ASP B 60 ? N ASP B 117 D 1 2 N THR B 31 ? N THR B 88 O TYR B 38 ? O TYR B 95 D 2 3 N CYS B 37 ? N CYS B 94 O MET B 151 ? O MET B 208 D 3 4 O LYS B 146 ? O LYS B 203 N PHE B 84 ? N PHE B 141 D 4 5 N ASP B 89 ? N ASP B 146 O ARG B 122 ? O ARG B 179 D 5 6 N ILE B 125 ? N ILE B 182 O ASN B 137 ? O ASN B 194 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A EDO 1001 ? 3 'BINDING SITE FOR RESIDUE EDO A 1001' AC2 Software B EDO 301 ? 4 'BINDING SITE FOR RESIDUE EDO B 301' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 3 SER A 41 ? SER A 98 . ? 1_555 ? 2 AC1 3 THR A 42 ? THR A 99 . ? 1_555 ? 3 AC1 3 ASN A 53 ? ASN A 110 . ? 1_555 ? 4 AC2 4 SER B 41 ? SER B 98 . ? 1_555 ? 5 AC2 4 THR B 42 ? THR B 99 . ? 1_555 ? 6 AC2 4 GLY B 43 ? GLY B 100 . ? 1_555 ? 7 AC2 4 ASN B 53 ? ASN B 110 . ? 1_555 ? # _pdbx_entry_details.entry_id 3WBP _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? _pdbx_entry_details.has_protein_modification Y # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 GLN A 91 ? ? 51.78 -126.98 2 1 SER A 92 ? ? -107.64 42.91 3 1 GLN B 91 ? ? 49.42 -125.28 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 58 ? A MET 1 2 1 Y 1 A ASN 59 ? A ASN 2 3 1 Y 1 A HIS 60 ? A HIS 3 4 1 Y 1 A LYS 61 ? A LYS 4 5 1 Y 1 A VAL 62 ? A VAL 5 6 1 Y 1 A HIS 63 ? A HIS 6 7 1 Y 1 A HIS 64 ? A HIS 7 8 1 Y 1 A HIS 65 ? A HIS 8 9 1 Y 1 A HIS 66 ? A HIS 9 10 1 Y 1 A HIS 67 ? A HIS 10 11 1 Y 1 A HIS 68 ? A HIS 11 12 1 Y 1 A ILE 69 ? A ILE 12 13 1 Y 1 A GLU 70 ? A GLU 13 14 1 Y 1 A GLY 71 ? A GLY 14 15 1 Y 1 A ARG 72 ? A ARG 15 16 1 Y 1 A HIS 73 ? A HIS 16 17 1 Y 1 A MET 74 ? A MET 17 18 1 Y 1 A GLU 75 ? A GLU 18 19 1 Y 1 A ASN 76 ? A ASN 19 20 1 Y 1 A LEU 77 ? A LEU 20 21 1 Y 1 A TYR 78 ? A TYR 21 22 1 Y 1 A PHE 79 ? A PHE 22 23 1 Y 1 A GLN 80 ? A GLN 23 24 1 Y 1 A GLY 81 ? A GLY 24 25 1 Y 1 A GLU 189 ? A GLU 132 26 1 Y 1 B MET 58 ? B MET 1 27 1 Y 1 B ASN 59 ? B ASN 2 28 1 Y 1 B HIS 60 ? B HIS 3 29 1 Y 1 B LYS 61 ? B LYS 4 30 1 Y 1 B VAL 62 ? B VAL 5 31 1 Y 1 B HIS 63 ? B HIS 6 32 1 Y 1 B HIS 64 ? B HIS 7 33 1 Y 1 B HIS 65 ? B HIS 8 34 1 Y 1 B HIS 66 ? B HIS 9 35 1 Y 1 B HIS 67 ? B HIS 10 36 1 Y 1 B HIS 68 ? B HIS 11 37 1 Y 1 B ILE 69 ? B ILE 12 38 1 Y 1 B GLU 70 ? B GLU 13 39 1 Y 1 B GLY 71 ? B GLY 14 40 1 Y 1 B ARG 72 ? B ARG 15 41 1 Y 1 B HIS 73 ? B HIS 16 42 1 Y 1 B MET 74 ? B MET 17 43 1 Y 1 B GLU 75 ? B GLU 18 44 1 Y 1 B ASN 76 ? B ASN 19 45 1 Y 1 B LEU 77 ? B LEU 20 46 1 Y 1 B TYR 78 ? B TYR 21 47 1 Y 1 B PHE 79 ? B PHE 22 48 1 Y 1 B GLN 80 ? B GLN 23 49 1 Y 1 B GLY 81 ? B GLY 24 50 1 Y 1 B SER 188 ? B SER 131 51 1 Y 1 B GLU 189 ? B GLU 132 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 EDO C1 C N N 88 EDO O1 O N N 89 EDO C2 C N N 90 EDO O2 O N N 91 EDO H11 H N N 92 EDO H12 H N N 93 EDO HO1 H N N 94 EDO H21 H N N 95 EDO H22 H N N 96 EDO HO2 H N N 97 GLN N N N N 98 GLN CA C N S 99 GLN C C N N 100 GLN O O N N 101 GLN CB C N N 102 GLN CG C N N 103 GLN CD C N N 104 GLN OE1 O N N 105 GLN NE2 N N N 106 GLN OXT O N N 107 GLN H H N N 108 GLN H2 H N N 109 GLN HA H N N 110 GLN HB2 H N N 111 GLN HB3 H N N 112 GLN HG2 H N N 113 GLN HG3 H N N 114 GLN HE21 H N N 115 GLN HE22 H N N 116 GLN HXT H N N 117 GLU N N N N 118 GLU CA C N S 119 GLU C C N N 120 GLU O O N N 121 GLU CB C N N 122 GLU CG C N N 123 GLU CD C N N 124 GLU OE1 O N N 125 GLU OE2 O N N 126 GLU OXT O N N 127 GLU H H N N 128 GLU H2 H N N 129 GLU HA H N N 130 GLU HB2 H N N 131 GLU HB3 H N N 132 GLU HG2 H N N 133 GLU HG3 H N N 134 GLU HE2 H N N 135 GLU HXT H N N 136 GLY N N N N 137 GLY CA C N N 138 GLY C C N N 139 GLY O O N N 140 GLY OXT O N N 141 GLY H H N N 142 GLY H2 H N N 143 GLY HA2 H N N 144 GLY HA3 H N N 145 GLY HXT H N N 146 HIS N N N N 147 HIS CA C N S 148 HIS C C N N 149 HIS O O N N 150 HIS CB C N N 151 HIS CG C Y N 152 HIS ND1 N Y N 153 HIS CD2 C Y N 154 HIS CE1 C Y N 155 HIS NE2 N Y N 156 HIS OXT O N N 157 HIS H H N N 158 HIS H2 H N N 159 HIS HA H N N 160 HIS HB2 H N N 161 HIS HB3 H N N 162 HIS HD1 H N N 163 HIS HD2 H N N 164 HIS HE1 H N N 165 HIS HE2 H N N 166 HIS HXT H N N 167 HOH O O N N 168 HOH H1 H N N 169 HOH H2 H N N 170 ILE N N N N 171 ILE CA C N S 172 ILE C C N N 173 ILE O O N N 174 ILE CB C N S 175 ILE CG1 C N N 176 ILE CG2 C N N 177 ILE CD1 C N N 178 ILE OXT O N N 179 ILE H H N N 180 ILE H2 H N N 181 ILE HA H N N 182 ILE HB H N N 183 ILE HG12 H N N 184 ILE HG13 H N N 185 ILE HG21 H N N 186 ILE HG22 H N N 187 ILE HG23 H N N 188 ILE HD11 H N N 189 ILE HD12 H N N 190 ILE HD13 H N N 191 ILE HXT H N N 192 LEU N N N N 193 LEU CA C N S 194 LEU C C N N 195 LEU O O N N 196 LEU CB C N N 197 LEU CG C N N 198 LEU CD1 C N N 199 LEU CD2 C N N 200 LEU OXT O N N 201 LEU H H N N 202 LEU H2 H N N 203 LEU HA H N N 204 LEU HB2 H N N 205 LEU HB3 H N N 206 LEU HG H N N 207 LEU HD11 H N N 208 LEU HD12 H N N 209 LEU HD13 H N N 210 LEU HD21 H N N 211 LEU HD22 H N N 212 LEU HD23 H N N 213 LEU HXT H N N 214 LYS N N N N 215 LYS CA C N S 216 LYS C C N N 217 LYS O O N N 218 LYS CB C N N 219 LYS CG C N N 220 LYS CD C N N 221 LYS CE C N N 222 LYS NZ N N N 223 LYS OXT O N N 224 LYS H H N N 225 LYS H2 H N N 226 LYS HA H N N 227 LYS HB2 H N N 228 LYS HB3 H N N 229 LYS HG2 H N N 230 LYS HG3 H N N 231 LYS HD2 H N N 232 LYS HD3 H N N 233 LYS HE2 H N N 234 LYS HE3 H N N 235 LYS HZ1 H N N 236 LYS HZ2 H N N 237 LYS HZ3 H N N 238 LYS HXT H N N 239 MET N N N N 240 MET CA C N S 241 MET C C N N 242 MET O O N N 243 MET CB C N N 244 MET CG C N N 245 MET SD S N N 246 MET CE C N N 247 MET OXT O N N 248 MET H H N N 249 MET H2 H N N 250 MET HA H N N 251 MET HB2 H N N 252 MET HB3 H N N 253 MET HG2 H N N 254 MET HG3 H N N 255 MET HE1 H N N 256 MET HE2 H N N 257 MET HE3 H N N 258 MET HXT H N N 259 PHE N N N N 260 PHE CA C N S 261 PHE C C N N 262 PHE O O N N 263 PHE CB C N N 264 PHE CG C Y N 265 PHE CD1 C Y N 266 PHE CD2 C Y N 267 PHE CE1 C Y N 268 PHE CE2 C Y N 269 PHE CZ C Y N 270 PHE OXT O N N 271 PHE H H N N 272 PHE H2 H N N 273 PHE HA H N N 274 PHE HB2 H N N 275 PHE HB3 H N N 276 PHE HD1 H N N 277 PHE HD2 H N N 278 PHE HE1 H N N 279 PHE HE2 H N N 280 PHE HZ H N N 281 PHE HXT H N N 282 PRO N N N N 283 PRO CA C N S 284 PRO C C N N 285 PRO O O N N 286 PRO CB C N N 287 PRO CG C N N 288 PRO CD C N N 289 PRO OXT O N N 290 PRO H H N N 291 PRO HA H N N 292 PRO HB2 H N N 293 PRO HB3 H N N 294 PRO HG2 H N N 295 PRO HG3 H N N 296 PRO HD2 H N N 297 PRO HD3 H N N 298 PRO HXT H N N 299 SER N N N N 300 SER CA C N S 301 SER C C N N 302 SER O O N N 303 SER CB C N N 304 SER OG O N N 305 SER OXT O N N 306 SER H H N N 307 SER H2 H N N 308 SER HA H N N 309 SER HB2 H N N 310 SER HB3 H N N 311 SER HG H N N 312 SER HXT H N N 313 THR N N N N 314 THR CA C N S 315 THR C C N N 316 THR O O N N 317 THR CB C N R 318 THR OG1 O N N 319 THR CG2 C N N 320 THR OXT O N N 321 THR H H N N 322 THR H2 H N N 323 THR HA H N N 324 THR HB H N N 325 THR HG1 H N N 326 THR HG21 H N N 327 THR HG22 H N N 328 THR HG23 H N N 329 THR HXT H N N 330 TRP N N N N 331 TRP CA C N S 332 TRP C C N N 333 TRP O O N N 334 TRP CB C N N 335 TRP CG C Y N 336 TRP CD1 C Y N 337 TRP CD2 C Y N 338 TRP NE1 N Y N 339 TRP CE2 C Y N 340 TRP CE3 C Y N 341 TRP CZ2 C Y N 342 TRP CZ3 C Y N 343 TRP CH2 C Y N 344 TRP OXT O N N 345 TRP H H N N 346 TRP H2 H N N 347 TRP HA H N N 348 TRP HB2 H N N 349 TRP HB3 H N N 350 TRP HD1 H N N 351 TRP HE1 H N N 352 TRP HE3 H N N 353 TRP HZ2 H N N 354 TRP HZ3 H N N 355 TRP HH2 H N N 356 TRP HXT H N N 357 TYR N N N N 358 TYR CA C N S 359 TYR C C N N 360 TYR O O N N 361 TYR CB C N N 362 TYR CG C Y N 363 TYR CD1 C Y N 364 TYR CD2 C Y N 365 TYR CE1 C Y N 366 TYR CE2 C Y N 367 TYR CZ C Y N 368 TYR OH O N N 369 TYR OXT O N N 370 TYR H H N N 371 TYR H2 H N N 372 TYR HA H N N 373 TYR HB2 H N N 374 TYR HB3 H N N 375 TYR HD1 H N N 376 TYR HD2 H N N 377 TYR HE1 H N N 378 TYR HE2 H N N 379 TYR HH H N N 380 TYR HXT H N N 381 VAL N N N N 382 VAL CA C N S 383 VAL C C N N 384 VAL O O N N 385 VAL CB C N N 386 VAL CG1 C N N 387 VAL CG2 C N N 388 VAL OXT O N N 389 VAL H H N N 390 VAL H2 H N N 391 VAL HA H N N 392 VAL HB H N N 393 VAL HG11 H N N 394 VAL HG12 H N N 395 VAL HG13 H N N 396 VAL HG21 H N N 397 VAL HG22 H N N 398 VAL HG23 H N N 399 VAL HXT H N N 400 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 EDO C1 O1 sing N N 83 EDO C1 C2 sing N N 84 EDO C1 H11 sing N N 85 EDO C1 H12 sing N N 86 EDO O1 HO1 sing N N 87 EDO C2 O2 sing N N 88 EDO C2 H21 sing N N 89 EDO C2 H22 sing N N 90 EDO O2 HO2 sing N N 91 GLN N CA sing N N 92 GLN N H sing N N 93 GLN N H2 sing N N 94 GLN CA C sing N N 95 GLN CA CB sing N N 96 GLN CA HA sing N N 97 GLN C O doub N N 98 GLN C OXT sing N N 99 GLN CB CG sing N N 100 GLN CB HB2 sing N N 101 GLN CB HB3 sing N N 102 GLN CG CD sing N N 103 GLN CG HG2 sing N N 104 GLN CG HG3 sing N N 105 GLN CD OE1 doub N N 106 GLN CD NE2 sing N N 107 GLN NE2 HE21 sing N N 108 GLN NE2 HE22 sing N N 109 GLN OXT HXT sing N N 110 GLU N CA sing N N 111 GLU N H sing N N 112 GLU N H2 sing N N 113 GLU CA C sing N N 114 GLU CA CB sing N N 115 GLU CA HA sing N N 116 GLU C O doub N N 117 GLU C OXT sing N N 118 GLU CB CG sing N N 119 GLU CB HB2 sing N N 120 GLU CB HB3 sing N N 121 GLU CG CD sing N N 122 GLU CG HG2 sing N N 123 GLU CG HG3 sing N N 124 GLU CD OE1 doub N N 125 GLU CD OE2 sing N N 126 GLU OE2 HE2 sing N N 127 GLU OXT HXT sing N N 128 GLY N CA sing N N 129 GLY N H sing N N 130 GLY N H2 sing N N 131 GLY CA C sing N N 132 GLY CA HA2 sing N N 133 GLY CA HA3 sing N N 134 GLY C O doub N N 135 GLY C OXT sing N N 136 GLY OXT HXT sing N N 137 HIS N CA sing N N 138 HIS N H sing N N 139 HIS N H2 sing N N 140 HIS CA C sing N N 141 HIS CA CB sing N N 142 HIS CA HA sing N N 143 HIS C O doub N N 144 HIS C OXT sing N N 145 HIS CB CG sing N N 146 HIS CB HB2 sing N N 147 HIS CB HB3 sing N N 148 HIS CG ND1 sing Y N 149 HIS CG CD2 doub Y N 150 HIS ND1 CE1 doub Y N 151 HIS ND1 HD1 sing N N 152 HIS CD2 NE2 sing Y N 153 HIS CD2 HD2 sing N N 154 HIS CE1 NE2 sing Y N 155 HIS CE1 HE1 sing N N 156 HIS NE2 HE2 sing N N 157 HIS OXT HXT sing N N 158 HOH O H1 sing N N 159 HOH O H2 sing N N 160 ILE N CA sing N N 161 ILE N H sing N N 162 ILE N H2 sing N N 163 ILE CA C sing N N 164 ILE CA CB sing N N 165 ILE CA HA sing N N 166 ILE C O doub N N 167 ILE C OXT sing N N 168 ILE CB CG1 sing N N 169 ILE CB CG2 sing N N 170 ILE CB HB sing N N 171 ILE CG1 CD1 sing N N 172 ILE CG1 HG12 sing N N 173 ILE CG1 HG13 sing N N 174 ILE CG2 HG21 sing N N 175 ILE CG2 HG22 sing N N 176 ILE CG2 HG23 sing N N 177 ILE CD1 HD11 sing N N 178 ILE CD1 HD12 sing N N 179 ILE CD1 HD13 sing N N 180 ILE OXT HXT sing N N 181 LEU N CA sing N N 182 LEU N H sing N N 183 LEU N H2 sing N N 184 LEU CA C sing N N 185 LEU CA CB sing N N 186 LEU CA HA sing N N 187 LEU C O doub N N 188 LEU C OXT sing N N 189 LEU CB CG sing N N 190 LEU CB HB2 sing N N 191 LEU CB HB3 sing N N 192 LEU CG CD1 sing N N 193 LEU CG CD2 sing N N 194 LEU CG HG sing N N 195 LEU CD1 HD11 sing N N 196 LEU CD1 HD12 sing N N 197 LEU CD1 HD13 sing N N 198 LEU CD2 HD21 sing N N 199 LEU CD2 HD22 sing N N 200 LEU CD2 HD23 sing N N 201 LEU OXT HXT sing N N 202 LYS N CA sing N N 203 LYS N H sing N N 204 LYS N H2 sing N N 205 LYS CA C sing N N 206 LYS CA CB sing N N 207 LYS CA HA sing N N 208 LYS C O doub N N 209 LYS C OXT sing N N 210 LYS CB CG sing N N 211 LYS CB HB2 sing N N 212 LYS CB HB3 sing N N 213 LYS CG CD sing N N 214 LYS CG HG2 sing N N 215 LYS CG HG3 sing N N 216 LYS CD CE sing N N 217 LYS CD HD2 sing N N 218 LYS CD HD3 sing N N 219 LYS CE NZ sing N N 220 LYS CE HE2 sing N N 221 LYS CE HE3 sing N N 222 LYS NZ HZ1 sing N N 223 LYS NZ HZ2 sing N N 224 LYS NZ HZ3 sing N N 225 LYS OXT HXT sing N N 226 MET N CA sing N N 227 MET N H sing N N 228 MET N H2 sing N N 229 MET CA C sing N N 230 MET CA CB sing N N 231 MET CA HA sing N N 232 MET C O doub N N 233 MET C OXT sing N N 234 MET CB CG sing N N 235 MET CB HB2 sing N N 236 MET CB HB3 sing N N 237 MET CG SD sing N N 238 MET CG HG2 sing N N 239 MET CG HG3 sing N N 240 MET SD CE sing N N 241 MET CE HE1 sing N N 242 MET CE HE2 sing N N 243 MET CE HE3 sing N N 244 MET OXT HXT sing N N 245 PHE N CA sing N N 246 PHE N H sing N N 247 PHE N H2 sing N N 248 PHE CA C sing N N 249 PHE CA CB sing N N 250 PHE CA HA sing N N 251 PHE C O doub N N 252 PHE C OXT sing N N 253 PHE CB CG sing N N 254 PHE CB HB2 sing N N 255 PHE CB HB3 sing N N 256 PHE CG CD1 doub Y N 257 PHE CG CD2 sing Y N 258 PHE CD1 CE1 sing Y N 259 PHE CD1 HD1 sing N N 260 PHE CD2 CE2 doub Y N 261 PHE CD2 HD2 sing N N 262 PHE CE1 CZ doub Y N 263 PHE CE1 HE1 sing N N 264 PHE CE2 CZ sing Y N 265 PHE CE2 HE2 sing N N 266 PHE CZ HZ sing N N 267 PHE OXT HXT sing N N 268 PRO N CA sing N N 269 PRO N CD sing N N 270 PRO N H sing N N 271 PRO CA C sing N N 272 PRO CA CB sing N N 273 PRO CA HA sing N N 274 PRO C O doub N N 275 PRO C OXT sing N N 276 PRO CB CG sing N N 277 PRO CB HB2 sing N N 278 PRO CB HB3 sing N N 279 PRO CG CD sing N N 280 PRO CG HG2 sing N N 281 PRO CG HG3 sing N N 282 PRO CD HD2 sing N N 283 PRO CD HD3 sing N N 284 PRO OXT HXT sing N N 285 SER N CA sing N N 286 SER N H sing N N 287 SER N H2 sing N N 288 SER CA C sing N N 289 SER CA CB sing N N 290 SER CA HA sing N N 291 SER C O doub N N 292 SER C OXT sing N N 293 SER CB OG sing N N 294 SER CB HB2 sing N N 295 SER CB HB3 sing N N 296 SER OG HG sing N N 297 SER OXT HXT sing N N 298 THR N CA sing N N 299 THR N H sing N N 300 THR N H2 sing N N 301 THR CA C sing N N 302 THR CA CB sing N N 303 THR CA HA sing N N 304 THR C O doub N N 305 THR C OXT sing N N 306 THR CB OG1 sing N N 307 THR CB CG2 sing N N 308 THR CB HB sing N N 309 THR OG1 HG1 sing N N 310 THR CG2 HG21 sing N N 311 THR CG2 HG22 sing N N 312 THR CG2 HG23 sing N N 313 THR OXT HXT sing N N 314 TRP N CA sing N N 315 TRP N H sing N N 316 TRP N H2 sing N N 317 TRP CA C sing N N 318 TRP CA CB sing N N 319 TRP CA HA sing N N 320 TRP C O doub N N 321 TRP C OXT sing N N 322 TRP CB CG sing N N 323 TRP CB HB2 sing N N 324 TRP CB HB3 sing N N 325 TRP CG CD1 doub Y N 326 TRP CG CD2 sing Y N 327 TRP CD1 NE1 sing Y N 328 TRP CD1 HD1 sing N N 329 TRP CD2 CE2 doub Y N 330 TRP CD2 CE3 sing Y N 331 TRP NE1 CE2 sing Y N 332 TRP NE1 HE1 sing N N 333 TRP CE2 CZ2 sing Y N 334 TRP CE3 CZ3 doub Y N 335 TRP CE3 HE3 sing N N 336 TRP CZ2 CH2 doub Y N 337 TRP CZ2 HZ2 sing N N 338 TRP CZ3 CH2 sing Y N 339 TRP CZ3 HZ3 sing N N 340 TRP CH2 HH2 sing N N 341 TRP OXT HXT sing N N 342 TYR N CA sing N N 343 TYR N H sing N N 344 TYR N H2 sing N N 345 TYR CA C sing N N 346 TYR CA CB sing N N 347 TYR CA HA sing N N 348 TYR C O doub N N 349 TYR C OXT sing N N 350 TYR CB CG sing N N 351 TYR CB HB2 sing N N 352 TYR CB HB3 sing N N 353 TYR CG CD1 doub Y N 354 TYR CG CD2 sing Y N 355 TYR CD1 CE1 sing Y N 356 TYR CD1 HD1 sing N N 357 TYR CD2 CE2 doub Y N 358 TYR CD2 HD2 sing N N 359 TYR CE1 CZ doub Y N 360 TYR CE1 HE1 sing N N 361 TYR CE2 CZ sing Y N 362 TYR CE2 HE2 sing N N 363 TYR CZ OH sing N N 364 TYR OH HH sing N N 365 TYR OXT HXT sing N N 366 VAL N CA sing N N 367 VAL N H sing N N 368 VAL N H2 sing N N 369 VAL CA C sing N N 370 VAL CA CB sing N N 371 VAL CA HA sing N N 372 VAL C O doub N N 373 VAL C OXT sing N N 374 VAL CB CG1 sing N N 375 VAL CB CG2 sing N N 376 VAL CB HB sing N N 377 VAL CG1 HG11 sing N N 378 VAL CG1 HG12 sing N N 379 VAL CG1 HG13 sing N N 380 VAL CG2 HG21 sing N N 381 VAL CG2 HG22 sing N N 382 VAL CG2 HG23 sing N N 383 VAL OXT HXT sing N N 384 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 3VYJ _pdbx_initial_refinement_model.details 'PDB entry 3VYJ' # _atom_sites.entry_id 3WBP _atom_sites.fract_transf_matrix[1][1] 0.012178 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] -0.000000 _atom_sites.fract_transf_matrix[2][2] 0.012178 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] -0.000000 _atom_sites.fract_transf_matrix[3][3] 0.022355 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_