HEADER OXIDOREDUCTASE 22-MAY-13 3WBY TITLE CRYSTAL STRUCTURE OF GOX0644 D53A MUTANT IN COMPLEX WITH NADPH COMPND MOL_ID: 1; COMPND 2 MOLECULE: PUTATIVE 2,5-DIKETO-D-GLUCONIC ACID REDUCTASE; COMPND 3 CHAIN: A, B; COMPND 4 EC: 1.1.1.-; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: GLUCONOBACTER OXYDANS; SOURCE 3 ORGANISM_TAXID: 290633; SOURCE 4 STRAIN: 621H; SOURCE 5 GENE: GOX0644; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS ALDO-KETO REDUCTASE (AKR), REDUCTASE, NADPH, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR Y.A.YUAN,C.WANG REVDAT 2 20-MAR-24 3WBY 1 REMARK SEQADV REVDAT 1 28-MAY-14 3WBY 0 JRNL AUTH Y.A.YUAN,C.WANG JRNL TITL CRYSTAL STRUCTURE OF GOX0644 D53A MUTANT IN COMPLEX WITH JRNL TITL 2 NADPH JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 3.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.7.0029 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.57 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 9261 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.224 REMARK 3 R VALUE (WORKING SET) : 0.218 REMARK 3 FREE R VALUE : 0.326 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.800 REMARK 3 FREE R VALUE TEST SET COUNT : 440 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 3.21 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 3.29 REMARK 3 REFLECTION IN BIN (WORKING SET) : 617 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 97.00 REMARK 3 BIN R VALUE (WORKING SET) : 0.2900 REMARK 3 BIN FREE R VALUE SET COUNT : 30 REMARK 3 BIN FREE R VALUE : 0.3270 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4358 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 96 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 60.04 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.50000 REMARK 3 B22 (A**2) : -0.43000 REMARK 3 B33 (A**2) : -0.08000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.755 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.675 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 38.920 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.914 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.830 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4560 ; 0.011 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 4334 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 6192 ; 1.623 ; 1.978 REMARK 3 BOND ANGLES OTHERS (DEGREES): 9974 ; 0.847 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 540 ; 7.928 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 222 ;37.307 ;23.874 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 792 ;20.465 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 38 ;20.071 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 668 ; 0.080 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 5080 ; 0.005 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 1054 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES: REFINED INDIVIDUALLY REMARK 4 REMARK 4 3WBY COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 07-OCT-13. REMARK 100 THE DEPOSITION ID IS D_1000096142. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-JAN-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.3 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X29A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0075 REMARK 200 MONOCHROMATOR : 180 DEGREE COLLECTION, 1 DEGREE REMARK 200 OSCILLATION REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 9300 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.200 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 7.000 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.26 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 41.16 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.09 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG3350, LI2SO4, BIS-TRIS, PH 6.3, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 27.81900 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 62.81200 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 38.29350 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 62.81200 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 27.81900 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 38.29350 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -2 REMARK 465 SER A -1 REMARK 465 HIS A 0 REMARK 465 MET A 1 REMARK 465 SER A 2 REMARK 465 SER A 3 REMARK 465 GLN A 4 REMARK 465 VAL A 5 REMARK 465 PRO A 6 REMARK 465 SER A 7 REMARK 465 ALA A 8 REMARK 465 GLY B -2 REMARK 465 SER B -1 REMARK 465 HIS B 0 REMARK 465 MET B 1 REMARK 465 SER B 2 REMARK 465 SER B 3 REMARK 465 GLN B 4 REMARK 465 VAL B 5 REMARK 465 PRO B 6 REMARK 465 SER B 7 REMARK 465 ALA B 8 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O GLN B 120 OG1 THR B 124 2.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 31 -64.34 77.12 REMARK 500 THR A 32 116.05 -21.50 REMARK 500 PRO A 34 -46.92 -28.25 REMARK 500 ALA A 38 -64.46 -29.64 REMARK 500 ASN A 60 32.70 -148.37 REMARK 500 GLU A 73 -7.34 -47.79 REMARK 500 ARG A 102 69.76 65.70 REMARK 500 ARG A 103 76.28 -167.54 REMARK 500 PRO A 104 -41.44 -25.60 REMARK 500 ASN A 144 31.78 77.02 REMARK 500 GLU A 146 -164.27 -107.14 REMARK 500 SER A 147 -74.34 -68.83 REMARK 500 GLU A 148 -56.26 -18.66 REMARK 500 LEU A 168 143.71 174.51 REMARK 500 HIS A 169 158.41 165.75 REMARK 500 PHE A 172 118.83 -161.68 REMARK 500 GLN A 174 66.17 8.63 REMARK 500 ARG A 192 78.40 46.74 REMARK 500 LEU A 200 -38.29 -31.86 REMARK 500 GLU A 210 -74.71 -53.67 REMARK 500 LYS A 211 -57.79 -15.30 REMARK 500 GLN A 226 22.68 -79.91 REMARK 500 VAL A 236 -54.68 -129.06 REMARK 500 ASN A 237 96.61 -37.73 REMARK 500 GLU B 31 42.50 76.57 REMARK 500 LEU B 57 -49.10 -25.24 REMARK 500 ASN B 60 34.48 -152.92 REMARK 500 GLU B 69 -72.60 -59.25 REMARK 500 ARG B 102 -38.26 93.31 REMARK 500 MET B 115 70.45 61.08 REMARK 500 ALA B 117 12.18 -62.49 REMARK 500 GLN B 120 -1.09 -58.35 REMARK 500 GLU B 130 -1.20 -55.24 REMARK 500 ASN B 144 8.43 85.78 REMARK 500 GLU B 151 -77.25 -38.38 REMARK 500 ARG B 152 -11.20 -48.00 REMARK 500 THR B 157 -14.54 -156.89 REMARK 500 ALA B 176 -84.06 -43.68 REMARK 500 LYS B 196 -10.86 61.05 REMARK 500 VAL B 199 -45.46 -23.66 REMARK 500 SER B 213 50.28 39.88 REMARK 500 ALA B 217 -73.59 -39.55 REMARK 500 PRO B 238 15.69 -65.74 REMARK 500 ASP B 246 49.16 -104.49 REMARK 500 ASP B 267 39.73 -63.44 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NDP A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NDP B 301 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3WBW RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF GOX0644 IN COMPLEX WITH NADPH REMARK 900 RELATED ID: 3WBX RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF GOX0644 AT APOFORM DBREF 3WBY A 1 279 UNP Q5FT75 Q5FT75_GLUOX 1 279 DBREF 3WBY B 1 279 UNP Q5FT75 Q5FT75_GLUOX 1 279 SEQADV 3WBY GLY A -2 UNP Q5FT75 EXPRESSION TAG SEQADV 3WBY SER A -1 UNP Q5FT75 EXPRESSION TAG SEQADV 3WBY HIS A 0 UNP Q5FT75 EXPRESSION TAG SEQADV 3WBY ALA A 53 UNP Q5FT75 ASP 53 ENGINEERED MUTATION SEQADV 3WBY GLY B -2 UNP Q5FT75 EXPRESSION TAG SEQADV 3WBY SER B -1 UNP Q5FT75 EXPRESSION TAG SEQADV 3WBY HIS B 0 UNP Q5FT75 EXPRESSION TAG SEQADV 3WBY ALA B 53 UNP Q5FT75 ASP 53 ENGINEERED MUTATION SEQRES 1 A 282 GLY SER HIS MET SER SER GLN VAL PRO SER ALA GLU ALA SEQRES 2 A 282 GLN THR VAL ILE SER PHE HIS ASP GLY HIS THR MET PRO SEQRES 3 A 282 GLN ILE GLY LEU GLY VAL TRP GLU THR PRO PRO ASP GLU SEQRES 4 A 282 THR ALA GLU VAL VAL LYS GLU ALA VAL LYS LEU GLY TYR SEQRES 5 A 282 ARG SER VAL ALA THR ALA ARG LEU TYR LYS ASN GLU GLU SEQRES 6 A 282 GLY VAL GLY LYS GLY LEU GLU ASP HIS PRO GLU ILE PHE SEQRES 7 A 282 LEU THR THR LYS LEU TRP ASN ASP GLU GLN GLY TYR ASP SEQRES 8 A 282 SER THR LEU ARG ALA TYR GLU GLU SER ALA ARG LEU LEU SEQRES 9 A 282 ARG ARG PRO VAL LEU ASP LEU TYR LEU ILE HIS TRP PRO SEQRES 10 A 282 MET PRO ALA GLN GLY GLN TYR VAL GLU THR TRP LYS ALA SEQRES 11 A 282 LEU VAL GLU LEU LYS LYS SER GLY ARG VAL LYS SER ILE SEQRES 12 A 282 GLY VAL SER ASN PHE GLU SER GLU HIS LEU GLU ARG ILE SEQRES 13 A 282 MET ASP ALA THR GLY VAL VAL PRO VAL VAL ASN GLN ILE SEQRES 14 A 282 GLU LEU HIS PRO ASP PHE GLN GLN ARG ALA LEU ARG GLU SEQRES 15 A 282 PHE HIS GLU LYS HIS ASN ILE ARG THR GLU SER TRP ARG SEQRES 16 A 282 PRO LEU GLY LYS GLY ARG VAL LEU SER ASP GLU ARG ILE SEQRES 17 A 282 GLY LYS ILE ALA GLU LYS HIS SER ARG THR PRO ALA GLN SEQRES 18 A 282 VAL VAL ILE ARG TRP HIS LEU GLN ASN GLY LEU ILE VAL SEQRES 19 A 282 ILE PRO LYS SER VAL ASN PRO LYS ARG LEU ALA GLU ASN SEQRES 20 A 282 LEU ASP VAL PHE GLY PHE VAL LEU ASP ALA ASP ASP MET SEQRES 21 A 282 GLN ALA ILE GLU GLN MET ASP ARG LYS ASP GLY ARG MET SEQRES 22 A 282 GLY ALA ASP PRO ASN THR ALA LYS PHE SEQRES 1 B 282 GLY SER HIS MET SER SER GLN VAL PRO SER ALA GLU ALA SEQRES 2 B 282 GLN THR VAL ILE SER PHE HIS ASP GLY HIS THR MET PRO SEQRES 3 B 282 GLN ILE GLY LEU GLY VAL TRP GLU THR PRO PRO ASP GLU SEQRES 4 B 282 THR ALA GLU VAL VAL LYS GLU ALA VAL LYS LEU GLY TYR SEQRES 5 B 282 ARG SER VAL ALA THR ALA ARG LEU TYR LYS ASN GLU GLU SEQRES 6 B 282 GLY VAL GLY LYS GLY LEU GLU ASP HIS PRO GLU ILE PHE SEQRES 7 B 282 LEU THR THR LYS LEU TRP ASN ASP GLU GLN GLY TYR ASP SEQRES 8 B 282 SER THR LEU ARG ALA TYR GLU GLU SER ALA ARG LEU LEU SEQRES 9 B 282 ARG ARG PRO VAL LEU ASP LEU TYR LEU ILE HIS TRP PRO SEQRES 10 B 282 MET PRO ALA GLN GLY GLN TYR VAL GLU THR TRP LYS ALA SEQRES 11 B 282 LEU VAL GLU LEU LYS LYS SER GLY ARG VAL LYS SER ILE SEQRES 12 B 282 GLY VAL SER ASN PHE GLU SER GLU HIS LEU GLU ARG ILE SEQRES 13 B 282 MET ASP ALA THR GLY VAL VAL PRO VAL VAL ASN GLN ILE SEQRES 14 B 282 GLU LEU HIS PRO ASP PHE GLN GLN ARG ALA LEU ARG GLU SEQRES 15 B 282 PHE HIS GLU LYS HIS ASN ILE ARG THR GLU SER TRP ARG SEQRES 16 B 282 PRO LEU GLY LYS GLY ARG VAL LEU SER ASP GLU ARG ILE SEQRES 17 B 282 GLY LYS ILE ALA GLU LYS HIS SER ARG THR PRO ALA GLN SEQRES 18 B 282 VAL VAL ILE ARG TRP HIS LEU GLN ASN GLY LEU ILE VAL SEQRES 19 B 282 ILE PRO LYS SER VAL ASN PRO LYS ARG LEU ALA GLU ASN SEQRES 20 B 282 LEU ASP VAL PHE GLY PHE VAL LEU ASP ALA ASP ASP MET SEQRES 21 B 282 GLN ALA ILE GLU GLN MET ASP ARG LYS ASP GLY ARG MET SEQRES 22 B 282 GLY ALA ASP PRO ASN THR ALA LYS PHE HET NDP A 301 48 HET NDP B 301 48 HETNAM NDP NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE HETNAM 2 NDP PHOSPHATE FORMUL 3 NDP 2(C21 H30 N7 O17 P3) HELIX 1 1 PRO A 33 LYS A 46 1 14 HELIX 2 2 ASN A 60 LEU A 68 1 9 HELIX 3 3 TRP A 81 GLN A 85 5 5 HELIX 4 4 TYR A 87 ARG A 102 1 16 HELIX 5 5 MET A 115 GLY A 119 5 5 HELIX 6 6 GLN A 120 SER A 134 1 15 HELIX 7 7 GLU A 146 GLY A 158 1 13 HELIX 8 8 GLN A 174 LYS A 183 1 10 HELIX 9 9 LEU A 194 ASP A 202 5 9 HELIX 10 10 ARG A 204 HIS A 212 1 9 HELIX 11 11 THR A 215 GLN A 226 1 12 HELIX 12 12 ASN A 237 ASP A 246 1 10 HELIX 13 13 ASP A 253 GLU A 261 1 9 HELIX 14 14 PRO B 33 GLY B 48 1 16 HELIX 15 15 ASN B 60 LEU B 68 1 9 HELIX 16 16 GLY B 86 ARG B 102 1 17 HELIX 17 17 MET B 115 GLN B 118 5 4 HELIX 18 18 GLY B 119 LYS B 133 1 15 HELIX 19 19 GLU B 146 ASP B 155 1 10 HELIX 20 20 GLN B 174 HIS B 184 1 11 HELIX 21 21 LEU B 194 SER B 201 5 8 HELIX 22 22 ASP B 202 HIS B 212 1 11 HELIX 23 23 THR B 215 GLN B 226 1 12 HELIX 24 24 LYS B 239 ASP B 246 1 8 HELIX 25 25 ASP B 253 GLN B 262 1 10 SHEET 1 A 2 VAL A 13 SER A 15 0 SHEET 2 A 2 THR A 21 PRO A 23 -1 O MET A 22 N ILE A 14 SHEET 1 B 8 LEU A 27 GLY A 28 0 SHEET 2 B 8 SER A 51 ALA A 53 1 O SER A 51 N LEU A 27 SHEET 3 B 8 PHE A 75 LEU A 80 1 O PHE A 75 N VAL A 52 SHEET 4 B 8 LEU A 106 ILE A 111 1 O LEU A 110 N THR A 78 SHEET 5 B 8 VAL A 137 SER A 143 1 O LYS A 138 N LEU A 106 SHEET 6 B 8 VAL A 163 GLU A 167 1 O GLN A 165 N VAL A 142 SHEET 7 B 8 ARG A 187 TRP A 191 1 O GLU A 189 N ILE A 166 SHEET 8 B 8 ILE A 230 VAL A 231 1 O ILE A 230 N SER A 190 SHEET 1 C 2 VAL B 13 SER B 15 0 SHEET 2 C 2 THR B 21 PRO B 23 -1 O MET B 22 N ILE B 14 SHEET 1 D 8 LEU B 27 GLY B 28 0 SHEET 2 D 8 SER B 51 ALA B 53 1 O SER B 51 N LEU B 27 SHEET 3 D 8 PHE B 75 LEU B 80 1 O PHE B 75 N VAL B 52 SHEET 4 D 8 LEU B 106 ILE B 111 1 O LEU B 110 N LEU B 80 SHEET 5 D 8 VAL B 137 SER B 143 1 O SER B 139 N ASP B 107 SHEET 6 D 8 VAL B 163 GLU B 167 1 O VAL B 163 N VAL B 142 SHEET 7 D 8 ARG B 187 TRP B 191 1 O GLU B 189 N ILE B 166 SHEET 8 D 8 ILE B 230 VAL B 231 1 O ILE B 230 N SER B 190 SITE 1 AC1 18 GLU A 31 TRP A 113 TRP A 191 ARG A 192 SITE 2 AC1 18 PRO A 193 LEU A 194 LYS A 196 LEU A 200 SITE 3 AC1 18 LYS A 234 SER A 235 VAL A 236 ARG A 240 SITE 4 AC1 18 GLU A 243 ASN A 244 GLY A 271 ALA A 272 SITE 5 AC1 18 HIS B 20 THR B 21 SITE 1 AC2 17 HIS A 20 THR A 21 TRP B 30 GLU B 31 SITE 2 AC2 17 TRP B 113 TRP B 191 ARG B 192 PRO B 193 SITE 3 AC2 17 LEU B 194 LYS B 196 ALA B 217 LYS B 234 SITE 4 AC2 17 SER B 235 VAL B 236 ARG B 240 GLU B 243 SITE 5 AC2 17 ASN B 244 CRYST1 55.638 76.587 125.624 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017973 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013057 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007960 0.00000