HEADER TRANSFERASE/RNA 24-MAY-13 3WC2 TITLE CRYSTAL STRUCTURE OF C. ALBICANS TRNA(HIS) GUANYLYLTRANSFERASE (THG1) TITLE 2 WITH A TRNA(PHE)(GUG) COMPND MOL_ID: 1; COMPND 2 MOLECULE: LIKELY HISTIDYL TRNA-SPECIFIC GUANYLYLTRANSFERASE; COMPND 3 CHAIN: A, B, C, D; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: 76MER-TRNA; COMPND 7 CHAIN: P, Q; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CANDIDA ALBICANS; SOURCE 3 ORGANISM_COMMON: YEAST; SOURCE 4 ORGANISM_TAXID: 237561; SOURCE 5 STRAIN: SC5314 / ATCC MYA-2876; SOURCE 6 GENE: CAO19.7063, CAWG_05412, ORF19.7063, THG1; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: B834(DE3); SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PET26B; SOURCE 12 MOL_ID: 2; SOURCE 13 SYNTHETIC: YES; SOURCE 14 OTHER_DETAILS: IN VITRO TRANSCRIPTION KEYWDS TRANSFERASE-RNA COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR A.NAKAMURA,T.NEMOTO,T.SONODA,K.YAMASHITA,I.TANAKA,M.YAO REVDAT 5 08-NOV-23 3WC2 1 REMARK REVDAT 4 18-DEC-19 3WC2 1 REMARK SEQADV REVDAT 3 22-NOV-17 3WC2 1 REMARK REVDAT 2 15-JAN-14 3WC2 1 JRNL REVDAT 1 18-DEC-13 3WC2 0 JRNL AUTH A.NAKAMURA,T.NEMOTO,I.U.HEINEMANN,K.YAMASHITA,T.SONODA, JRNL AUTH 2 K.KOMODA,I.TANAKA,D.SOLL,M.YAO JRNL TITL STRUCTURAL BASIS OF REVERSE NUCLEOTIDE POLYMERIZATION JRNL REF PROC.NATL.ACAD.SCI.USA V. 110 20970 2013 JRNL REFN ISSN 0027-8424 JRNL PMID 24324136 JRNL DOI 10.1073/PNAS.1321312111 REMARK 2 REMARK 2 RESOLUTION. 3.64 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.8.2_1309 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.64 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 38.09 REMARK 3 MIN(FOBS/SIGMA_FOBS) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 18926 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.255 REMARK 3 R VALUE (WORKING SET) : 0.253 REMARK 3 FREE R VALUE : 0.288 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 7.040 REMARK 3 FREE R VALUE TEST SET COUNT : 1333 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 38.0922 - 7.8247 1.00 1921 135 0.2074 0.2499 REMARK 3 2 7.8247 - 6.2195 1.00 1768 158 0.2658 0.2552 REMARK 3 3 6.2195 - 5.4358 1.00 1790 130 0.2659 0.3340 REMARK 3 4 5.4358 - 4.9400 1.00 1762 117 0.2548 0.2707 REMARK 3 5 4.9400 - 4.5865 1.00 1736 142 0.2457 0.3039 REMARK 3 6 4.5865 - 4.3165 1.00 1766 126 0.2614 0.2823 REMARK 3 7 4.3165 - 4.1006 1.00 1736 123 0.2942 0.3640 REMARK 3 8 4.1006 - 3.9223 1.00 1732 135 0.3091 0.3292 REMARK 3 9 3.9223 - 3.7714 1.00 1712 150 0.3219 0.3443 REMARK 3 10 3.7714 - 3.6410 0.97 1670 117 0.3322 0.3422 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.530 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 29.430 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 125.8 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 104.9 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.004 11872 REMARK 3 ANGLE : 0.761 16758 REMARK 3 CHIRALITY : 0.035 1887 REMARK 3 PLANARITY : 0.003 1563 REMARK 3 DIHEDRAL : 14.093 4874 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN A REMARK 3 ORIGIN FOR THE GROUP (A): 52.3118 -41.9598 -16.7965 REMARK 3 T TENSOR REMARK 3 T11: 0.0682 T22: 0.5052 REMARK 3 T33: 0.2328 T12: 0.7903 REMARK 3 T13: 0.5270 T23: 0.0760 REMARK 3 L TENSOR REMARK 3 L11: 0.0891 L22: 0.1550 REMARK 3 L33: 0.1380 L12: -0.0755 REMARK 3 L13: -0.0951 L23: 0.0250 REMARK 3 S TENSOR REMARK 3 S11: -0.2152 S12: -0.2094 S13: -0.1208 REMARK 3 S21: -0.1925 S22: 0.1868 S23: -0.2263 REMARK 3 S31: 0.2351 S32: 0.1802 S33: 0.1001 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN B REMARK 3 ORIGIN FOR THE GROUP (A): 28.5425 -60.8517 -23.4225 REMARK 3 T TENSOR REMARK 3 T11: 0.8181 T22: 0.0511 REMARK 3 T33: 0.4023 T12: 0.3526 REMARK 3 T13: 1.0460 T23: -0.1080 REMARK 3 L TENSOR REMARK 3 L11: 0.0793 L22: 0.0162 REMARK 3 L33: 0.0266 L12: -0.0284 REMARK 3 L13: -0.0041 L23: -0.0154 REMARK 3 S TENSOR REMARK 3 S11: -0.2831 S12: -0.0038 S13: -0.2830 REMARK 3 S21: -0.1835 S22: 0.0275 S23: -0.1170 REMARK 3 S31: 0.1854 S32: 0.0083 S33: -0.0932 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN C REMARK 3 ORIGIN FOR THE GROUP (A): 23.1985 -14.5501 -42.0669 REMARK 3 T TENSOR REMARK 3 T11: 0.4923 T22: -0.1034 REMARK 3 T33: -0.5148 T12: 0.0034 REMARK 3 T13: -0.8521 T23: 0.7010 REMARK 3 L TENSOR REMARK 3 L11: 0.0829 L22: 0.1458 REMARK 3 L33: 0.0429 L12: -0.1490 REMARK 3 L13: -0.0300 L23: -0.1074 REMARK 3 S TENSOR REMARK 3 S11: -0.2643 S12: 0.0527 S13: -0.0115 REMARK 3 S21: -0.5094 S22: 0.0822 S23: 0.3095 REMARK 3 S31: -0.1743 S32: -0.0011 S33: -0.1652 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN D REMARK 3 ORIGIN FOR THE GROUP (A): 8.8533 -18.5411 -15.1210 REMARK 3 T TENSOR REMARK 3 T11: -0.0146 T22: -0.1618 REMARK 3 T33: 0.5261 T12: -0.1527 REMARK 3 T13: -0.5903 T23: -0.1503 REMARK 3 L TENSOR REMARK 3 L11: 0.2233 L22: 0.1681 REMARK 3 L33: 0.0478 L12: -0.0130 REMARK 3 L13: 0.0339 L23: -0.0111 REMARK 3 S TENSOR REMARK 3 S11: -0.3356 S12: -0.2154 S13: 0.2229 REMARK 3 S21: -0.2711 S22: 0.1202 S23: 0.1940 REMARK 3 S31: -0.1369 S32: -0.1039 S33: -0.1056 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN P REMARK 3 ORIGIN FOR THE GROUP (A): 21.6810 -39.2954 9.9471 REMARK 3 T TENSOR REMARK 3 T11: 1.0381 T22: 1.4832 REMARK 3 T33: 1.5649 T12: 0.4226 REMARK 3 T13: 0.0704 T23: 0.1411 REMARK 3 L TENSOR REMARK 3 L11: 0.0198 L22: 0.2290 REMARK 3 L33: 0.1522 L12: 0.0334 REMARK 3 L13: 0.1080 L23: 0.1166 REMARK 3 S TENSOR REMARK 3 S11: 0.1665 S12: -0.5298 S13: 0.0195 REMARK 3 S21: 0.3884 S22: -0.3039 S23: 0.2285 REMARK 3 S31: 0.0668 S32: 0.1123 S33: -0.0000 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN Q REMARK 3 ORIGIN FOR THE GROUP (A): 39.7130 -40.5532 -57.2493 REMARK 3 T TENSOR REMARK 3 T11: 2.2614 T22: 1.3784 REMARK 3 T33: 1.4059 T12: 0.2532 REMARK 3 T13: 0.2054 T23: -0.0455 REMARK 3 L TENSOR REMARK 3 L11: 0.0961 L22: 0.0816 REMARK 3 L33: 0.1947 L12: 0.0799 REMARK 3 L13: 0.0907 L23: 0.0591 REMARK 3 S TENSOR REMARK 3 S11: -0.4188 S12: 0.4969 S13: -0.1756 REMARK 3 S21: -0.3593 S22: 0.1501 S23: -0.6821 REMARK 3 S31: -0.4367 S32: 0.6374 S33: -0.0056 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3WC2 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 10-JUN-13. REMARK 100 THE DEPOSITION ID IS D_1000096146. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-JUN-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PHOTON FACTORY REMARK 200 BEAMLINE : BL-1A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.1000 REMARK 200 MONOCHROMATOR : SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 2M-F REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE, XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 18933 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.640 REMARK 200 RESOLUTION RANGE LOW (A) : 48.711 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.10700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 16.6800 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.64 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.86 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.1 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 1.20000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.050 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 3WBZ REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.32 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.25 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: BIS-TRIS PROPAN, CACL2, PEG 3350, PH REMARK 280 6.0, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+2/3 REMARK 290 6555 -X,-X+Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 99.78667 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 199.57333 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 199.57333 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 99.78667 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 16960 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 60890 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -112.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D, P, Q REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -2 REMARK 465 GLY A -1 REMARK 465 SER A 0 REMARK 465 MET A 1 REMARK 465 ALA A 2 REMARK 465 ASN A 3 REMARK 465 PHE A 218 REMARK 465 GLU A 219 REMARK 465 ASN A 220 REMARK 465 TYR A 221 REMARK 465 GLU A 222 REMARK 465 THR A 223 REMARK 465 GLU A 224 REMARK 465 ASP A 225 REMARK 465 GLU A 226 REMARK 465 ALA A 227 REMARK 465 GLU A 228 REMARK 465 LEU A 229 REMARK 465 SER A 230 REMARK 465 LYS A 231 REMARK 465 ARG A 232 REMARK 465 GLN A 233 REMARK 465 VAL A 234 REMARK 465 GLN A 235 REMARK 465 ARG A 236 REMARK 465 LEU A 237 REMARK 465 GLU A 238 REMARK 465 LYS A 239 REMARK 465 LYS A 240 REMARK 465 ARG A 241 REMARK 465 LYS A 242 REMARK 465 LYS A 243 REMARK 465 ALA A 244 REMARK 465 GLY B -2 REMARK 465 GLY B -1 REMARK 465 SER B 0 REMARK 465 MET B 1 REMARK 465 ALA B 2 REMARK 465 ASN B 3 REMARK 465 PHE B 218 REMARK 465 GLU B 219 REMARK 465 ASN B 220 REMARK 465 TYR B 221 REMARK 465 GLU B 222 REMARK 465 THR B 223 REMARK 465 GLU B 224 REMARK 465 ASP B 225 REMARK 465 GLU B 226 REMARK 465 ALA B 227 REMARK 465 GLU B 228 REMARK 465 LEU B 229 REMARK 465 SER B 230 REMARK 465 LYS B 231 REMARK 465 ARG B 232 REMARK 465 GLN B 233 REMARK 465 VAL B 234 REMARK 465 GLN B 235 REMARK 465 ARG B 236 REMARK 465 LEU B 237 REMARK 465 GLU B 238 REMARK 465 LYS B 239 REMARK 465 LYS B 240 REMARK 465 ARG B 241 REMARK 465 LYS B 242 REMARK 465 LYS B 243 REMARK 465 ALA B 244 REMARK 465 GLY C -2 REMARK 465 GLY C -1 REMARK 465 SER C 0 REMARK 465 MET C 1 REMARK 465 ALA C 2 REMARK 465 ASN C 3 REMARK 465 PHE C 218 REMARK 465 GLU C 219 REMARK 465 ASN C 220 REMARK 465 TYR C 221 REMARK 465 GLU C 222 REMARK 465 THR C 223 REMARK 465 GLU C 224 REMARK 465 ASP C 225 REMARK 465 GLU C 226 REMARK 465 ALA C 227 REMARK 465 GLU C 228 REMARK 465 LEU C 229 REMARK 465 SER C 230 REMARK 465 LYS C 231 REMARK 465 ARG C 232 REMARK 465 GLN C 233 REMARK 465 VAL C 234 REMARK 465 GLN C 235 REMARK 465 ARG C 236 REMARK 465 LEU C 237 REMARK 465 GLU C 238 REMARK 465 LYS C 239 REMARK 465 LYS C 240 REMARK 465 ARG C 241 REMARK 465 LYS C 242 REMARK 465 LYS C 243 REMARK 465 ALA C 244 REMARK 465 GLY D -2 REMARK 465 GLY D -1 REMARK 465 SER D 0 REMARK 465 MET D 1 REMARK 465 ALA D 2 REMARK 465 ASN D 3 REMARK 465 PHE D 218 REMARK 465 GLU D 219 REMARK 465 ASN D 220 REMARK 465 TYR D 221 REMARK 465 GLU D 222 REMARK 465 THR D 223 REMARK 465 GLU D 224 REMARK 465 ASP D 225 REMARK 465 GLU D 226 REMARK 465 ALA D 227 REMARK 465 GLU D 228 REMARK 465 LEU D 229 REMARK 465 SER D 230 REMARK 465 LYS D 231 REMARK 465 ARG D 232 REMARK 465 GLN D 233 REMARK 465 VAL D 234 REMARK 465 GLN D 235 REMARK 465 ARG D 236 REMARK 465 LEU D 237 REMARK 465 GLU D 238 REMARK 465 LYS D 239 REMARK 465 LYS D 240 REMARK 465 ARG D 241 REMARK 465 LYS D 242 REMARK 465 LYS D 243 REMARK 465 ALA D 244 REMARK 465 C P 75 REMARK 465 A P 76 REMARK 465 C Q 74 REMARK 465 C Q 75 REMARK 465 A Q 76 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD2 ASP C 130 NZ LYS D 95 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 G P 1 P G P 1 OP3 -0.122 REMARK 500 G Q 1 P G Q 1 OP3 -0.126 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 75 -118.84 54.99 REMARK 500 LYS A 119 77.19 -117.64 REMARK 500 SER B 75 -120.01 54.30 REMARK 500 LYS B 119 77.03 -116.11 REMARK 500 SER C 75 -119.71 54.12 REMARK 500 LYS C 119 78.00 -117.24 REMARK 500 LEU C 170 -152.11 -86.61 REMARK 500 SER D 75 -117.61 53.74 REMARK 500 LYS D 119 77.02 -117.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3WBZ RELATED DB: PDB REMARK 900 RELATED ID: 3WC0 RELATED DB: PDB REMARK 900 RELATED ID: 3WC1 RELATED DB: PDB DBREF 3WC2 A 1 268 UNP Q5AFK5 Q5AFK5_CANAL 1 268 DBREF 3WC2 B 1 268 UNP Q5AFK5 Q5AFK5_CANAL 1 268 DBREF 3WC2 C 1 268 UNP Q5AFK5 Q5AFK5_CANAL 1 268 DBREF 3WC2 D 1 268 UNP Q5AFK5 Q5AFK5_CANAL 1 268 DBREF 3WC2 P 1 76 PDB 3WC2 3WC2 1 76 DBREF 3WC2 Q 1 76 PDB 3WC2 3WC2 1 76 SEQADV 3WC2 GLY A -2 UNP Q5AFK5 EXPRESSION TAG SEQADV 3WC2 GLY A -1 UNP Q5AFK5 EXPRESSION TAG SEQADV 3WC2 SER A 0 UNP Q5AFK5 EXPRESSION TAG SEQADV 3WC2 GLY B -2 UNP Q5AFK5 EXPRESSION TAG SEQADV 3WC2 GLY B -1 UNP Q5AFK5 EXPRESSION TAG SEQADV 3WC2 SER B 0 UNP Q5AFK5 EXPRESSION TAG SEQADV 3WC2 GLY C -2 UNP Q5AFK5 EXPRESSION TAG SEQADV 3WC2 GLY C -1 UNP Q5AFK5 EXPRESSION TAG SEQADV 3WC2 SER C 0 UNP Q5AFK5 EXPRESSION TAG SEQADV 3WC2 GLY D -2 UNP Q5AFK5 EXPRESSION TAG SEQADV 3WC2 GLY D -1 UNP Q5AFK5 EXPRESSION TAG SEQADV 3WC2 SER D 0 UNP Q5AFK5 EXPRESSION TAG SEQRES 1 A 271 GLY GLY SER MET ALA ASN SER LYS TYR GLU TYR VAL LYS SEQRES 2 A 271 LEU PHE GLU LYS GLU ASN TYR LEU LEU PRO ASP THR TYR SEQRES 3 A 271 ILE ILE ILE ARG VAL ASP GLY LYS GLY PHE HIS LYS PHE SEQRES 4 A 271 SER GLN PHE TYR GLU PHE GLU LYS PRO ASN ASP LEU LYS SEQRES 5 A 271 ALA LEU GLN VAL MET ASN SER ALA ALA GLU LYS LEU MET SEQRES 6 A 271 SER LYS TYR SER ASP VAL MET LEU ALA TYR GLY ASP SER SEQRES 7 A 271 ASP GLU TYR SER PHE LEU LEU ARG LYS ASN CYS GLN LEU SEQRES 8 A 271 TYR GLU ARG ARG GLU MET LYS LEU THR THR LEU PHE SER SEQRES 9 A 271 SER LEU MET SER THR TYR TYR MET TYR PHE TRP SER GLN SEQRES 10 A 271 TYR PHE PRO ASP LYS PRO LEU HIS ILE ASP HIS LEU PRO SEQRES 11 A 271 ASN PHE ASP ALA ARG ALA VAL LEU TYR PRO ASP PHE LYS SEQRES 12 A 271 HIS ILE ARG ASN TYR PHE SER TRP ARG GLN VAL ASP CYS SEQRES 13 A 271 HIS ILE ASN ASN LEU TYR ASN THR THR PHE TRP ASN LEU SEQRES 14 A 271 VAL LEU LYS LEU LYS MET THR PRO GLN GLN ALA GLU GLN SEQRES 15 A 271 ARG LEU MET GLY THR VAL ALA SER ASP LYS ASN GLU ILE SEQRES 16 A 271 LEU PHE LYS GLU CYS GLY VAL ASN TYR ASN ASN GLU SER SEQRES 17 A 271 GLU MET TYR LYS LYS GLY THR ILE ILE VAL ARG GLU PHE SEQRES 18 A 271 GLU ASN TYR GLU THR GLU ASP GLU ALA GLU LEU SER LYS SEQRES 19 A 271 ARG GLN VAL GLN ARG LEU GLU LYS LYS ARG LYS LYS ALA SEQRES 20 A 271 GLU LEU LYS ILE TYR HIS VAL ASP ILE ILE ASN ASP ASP SEQRES 21 A 271 SER TRP TRP LYS SER ARG PRO TRP LEU LYS ASP SEQRES 1 B 271 GLY GLY SER MET ALA ASN SER LYS TYR GLU TYR VAL LYS SEQRES 2 B 271 LEU PHE GLU LYS GLU ASN TYR LEU LEU PRO ASP THR TYR SEQRES 3 B 271 ILE ILE ILE ARG VAL ASP GLY LYS GLY PHE HIS LYS PHE SEQRES 4 B 271 SER GLN PHE TYR GLU PHE GLU LYS PRO ASN ASP LEU LYS SEQRES 5 B 271 ALA LEU GLN VAL MET ASN SER ALA ALA GLU LYS LEU MET SEQRES 6 B 271 SER LYS TYR SER ASP VAL MET LEU ALA TYR GLY ASP SER SEQRES 7 B 271 ASP GLU TYR SER PHE LEU LEU ARG LYS ASN CYS GLN LEU SEQRES 8 B 271 TYR GLU ARG ARG GLU MET LYS LEU THR THR LEU PHE SER SEQRES 9 B 271 SER LEU MET SER THR TYR TYR MET TYR PHE TRP SER GLN SEQRES 10 B 271 TYR PHE PRO ASP LYS PRO LEU HIS ILE ASP HIS LEU PRO SEQRES 11 B 271 ASN PHE ASP ALA ARG ALA VAL LEU TYR PRO ASP PHE LYS SEQRES 12 B 271 HIS ILE ARG ASN TYR PHE SER TRP ARG GLN VAL ASP CYS SEQRES 13 B 271 HIS ILE ASN ASN LEU TYR ASN THR THR PHE TRP ASN LEU SEQRES 14 B 271 VAL LEU LYS LEU LYS MET THR PRO GLN GLN ALA GLU GLN SEQRES 15 B 271 ARG LEU MET GLY THR VAL ALA SER ASP LYS ASN GLU ILE SEQRES 16 B 271 LEU PHE LYS GLU CYS GLY VAL ASN TYR ASN ASN GLU SER SEQRES 17 B 271 GLU MET TYR LYS LYS GLY THR ILE ILE VAL ARG GLU PHE SEQRES 18 B 271 GLU ASN TYR GLU THR GLU ASP GLU ALA GLU LEU SER LYS SEQRES 19 B 271 ARG GLN VAL GLN ARG LEU GLU LYS LYS ARG LYS LYS ALA SEQRES 20 B 271 GLU LEU LYS ILE TYR HIS VAL ASP ILE ILE ASN ASP ASP SEQRES 21 B 271 SER TRP TRP LYS SER ARG PRO TRP LEU LYS ASP SEQRES 1 C 271 GLY GLY SER MET ALA ASN SER LYS TYR GLU TYR VAL LYS SEQRES 2 C 271 LEU PHE GLU LYS GLU ASN TYR LEU LEU PRO ASP THR TYR SEQRES 3 C 271 ILE ILE ILE ARG VAL ASP GLY LYS GLY PHE HIS LYS PHE SEQRES 4 C 271 SER GLN PHE TYR GLU PHE GLU LYS PRO ASN ASP LEU LYS SEQRES 5 C 271 ALA LEU GLN VAL MET ASN SER ALA ALA GLU LYS LEU MET SEQRES 6 C 271 SER LYS TYR SER ASP VAL MET LEU ALA TYR GLY ASP SER SEQRES 7 C 271 ASP GLU TYR SER PHE LEU LEU ARG LYS ASN CYS GLN LEU SEQRES 8 C 271 TYR GLU ARG ARG GLU MET LYS LEU THR THR LEU PHE SER SEQRES 9 C 271 SER LEU MET SER THR TYR TYR MET TYR PHE TRP SER GLN SEQRES 10 C 271 TYR PHE PRO ASP LYS PRO LEU HIS ILE ASP HIS LEU PRO SEQRES 11 C 271 ASN PHE ASP ALA ARG ALA VAL LEU TYR PRO ASP PHE LYS SEQRES 12 C 271 HIS ILE ARG ASN TYR PHE SER TRP ARG GLN VAL ASP CYS SEQRES 13 C 271 HIS ILE ASN ASN LEU TYR ASN THR THR PHE TRP ASN LEU SEQRES 14 C 271 VAL LEU LYS LEU LYS MET THR PRO GLN GLN ALA GLU GLN SEQRES 15 C 271 ARG LEU MET GLY THR VAL ALA SER ASP LYS ASN GLU ILE SEQRES 16 C 271 LEU PHE LYS GLU CYS GLY VAL ASN TYR ASN ASN GLU SER SEQRES 17 C 271 GLU MET TYR LYS LYS GLY THR ILE ILE VAL ARG GLU PHE SEQRES 18 C 271 GLU ASN TYR GLU THR GLU ASP GLU ALA GLU LEU SER LYS SEQRES 19 C 271 ARG GLN VAL GLN ARG LEU GLU LYS LYS ARG LYS LYS ALA SEQRES 20 C 271 GLU LEU LYS ILE TYR HIS VAL ASP ILE ILE ASN ASP ASP SEQRES 21 C 271 SER TRP TRP LYS SER ARG PRO TRP LEU LYS ASP SEQRES 1 D 271 GLY GLY SER MET ALA ASN SER LYS TYR GLU TYR VAL LYS SEQRES 2 D 271 LEU PHE GLU LYS GLU ASN TYR LEU LEU PRO ASP THR TYR SEQRES 3 D 271 ILE ILE ILE ARG VAL ASP GLY LYS GLY PHE HIS LYS PHE SEQRES 4 D 271 SER GLN PHE TYR GLU PHE GLU LYS PRO ASN ASP LEU LYS SEQRES 5 D 271 ALA LEU GLN VAL MET ASN SER ALA ALA GLU LYS LEU MET SEQRES 6 D 271 SER LYS TYR SER ASP VAL MET LEU ALA TYR GLY ASP SER SEQRES 7 D 271 ASP GLU TYR SER PHE LEU LEU ARG LYS ASN CYS GLN LEU SEQRES 8 D 271 TYR GLU ARG ARG GLU MET LYS LEU THR THR LEU PHE SER SEQRES 9 D 271 SER LEU MET SER THR TYR TYR MET TYR PHE TRP SER GLN SEQRES 10 D 271 TYR PHE PRO ASP LYS PRO LEU HIS ILE ASP HIS LEU PRO SEQRES 11 D 271 ASN PHE ASP ALA ARG ALA VAL LEU TYR PRO ASP PHE LYS SEQRES 12 D 271 HIS ILE ARG ASN TYR PHE SER TRP ARG GLN VAL ASP CYS SEQRES 13 D 271 HIS ILE ASN ASN LEU TYR ASN THR THR PHE TRP ASN LEU SEQRES 14 D 271 VAL LEU LYS LEU LYS MET THR PRO GLN GLN ALA GLU GLN SEQRES 15 D 271 ARG LEU MET GLY THR VAL ALA SER ASP LYS ASN GLU ILE SEQRES 16 D 271 LEU PHE LYS GLU CYS GLY VAL ASN TYR ASN ASN GLU SER SEQRES 17 D 271 GLU MET TYR LYS LYS GLY THR ILE ILE VAL ARG GLU PHE SEQRES 18 D 271 GLU ASN TYR GLU THR GLU ASP GLU ALA GLU LEU SER LYS SEQRES 19 D 271 ARG GLN VAL GLN ARG LEU GLU LYS LYS ARG LYS LYS ALA SEQRES 20 D 271 GLU LEU LYS ILE TYR HIS VAL ASP ILE ILE ASN ASP ASP SEQRES 21 D 271 SER TRP TRP LYS SER ARG PRO TRP LEU LYS ASP SEQRES 1 P 76 G C G G A U U U A G C U C SEQRES 2 P 76 A G U U G G G A G A G C G SEQRES 3 P 76 C C A G A C U G U G G A U SEQRES 4 P 76 C U G G A G G U C C U G U SEQRES 5 P 76 G U U C G A U C C A C A G SEQRES 6 P 76 A A U U C G C A C C A SEQRES 1 Q 76 G C G G A U U U A G C U C SEQRES 2 Q 76 A G U U G G G A G A G C G SEQRES 3 Q 76 C C A G A C U G U G G A U SEQRES 4 Q 76 C U G G A G G U C C U G U SEQRES 5 Q 76 G U U C G A U C C A C A G SEQRES 6 Q 76 A A U U C G C A C C A HELIX 1 1 TYR A 6 GLU A 13 5 8 HELIX 2 2 GLY A 32 TYR A 40 1 9 HELIX 3 3 ASP A 47 TYR A 65 1 19 HELIX 4 4 GLN A 87 ARG A 91 5 5 HELIX 5 5 ARG A 92 PHE A 116 1 25 HELIX 6 6 HIS A 122 LEU A 126 5 5 HELIX 7 7 ASP A 138 LYS A 169 1 32 HELIX 8 8 THR A 173 LEU A 181 1 9 HELIX 9 9 VAL A 185 GLY A 198 1 14 HELIX 10 10 ASN A 200 GLU A 204 5 5 HELIX 11 11 SER A 205 GLY A 211 1 7 HELIX 12 12 ASP A 256 SER A 262 1 7 HELIX 13 13 ARG A 263 LYS A 267 5 5 HELIX 14 14 TYR B 6 GLU B 13 5 8 HELIX 15 15 GLY B 32 TYR B 40 1 9 HELIX 16 16 ASP B 47 TYR B 65 1 19 HELIX 17 17 GLN B 87 ARG B 91 5 5 HELIX 18 18 ARG B 92 PHE B 116 1 25 HELIX 19 19 HIS B 122 LEU B 126 5 5 HELIX 20 20 ASP B 138 LYS B 169 1 32 HELIX 21 21 THR B 173 LEU B 181 1 9 HELIX 22 22 VAL B 185 GLY B 198 1 14 HELIX 23 23 ASN B 200 GLU B 204 5 5 HELIX 24 24 SER B 205 GLY B 211 1 7 HELIX 25 25 ASP B 256 SER B 262 1 7 HELIX 26 26 ARG B 263 LYS B 267 5 5 HELIX 27 27 TYR C 6 GLU C 13 5 8 HELIX 28 28 GLY C 32 TYR C 40 1 9 HELIX 29 29 ASP C 47 TYR C 65 1 19 HELIX 30 30 GLN C 87 ARG C 91 5 5 HELIX 31 31 ARG C 92 PHE C 116 1 25 HELIX 32 32 ASP C 138 LYS C 169 1 32 HELIX 33 33 THR C 173 MET C 182 1 10 HELIX 34 34 VAL C 185 GLU C 196 1 12 HELIX 35 35 ASN C 200 GLU C 204 5 5 HELIX 36 36 SER C 205 GLY C 211 1 7 HELIX 37 37 ASP C 256 SER C 262 1 7 HELIX 38 38 ARG C 263 LYS C 267 5 5 HELIX 39 39 TYR D 6 GLU D 13 5 8 HELIX 40 40 GLY D 32 TYR D 40 1 9 HELIX 41 41 ASP D 47 TYR D 65 1 19 HELIX 42 42 GLN D 87 ARG D 91 5 5 HELIX 43 43 ARG D 92 PHE D 116 1 25 HELIX 44 44 HIS D 122 LEU D 126 5 5 HELIX 45 45 ASP D 138 LYS D 169 1 32 HELIX 46 46 THR D 173 LEU D 181 1 9 HELIX 47 47 VAL D 185 CYS D 197 1 13 HELIX 48 48 ASN D 200 GLU D 204 5 5 HELIX 49 49 SER D 205 GLY D 211 1 7 HELIX 50 50 ASP D 256 SER D 262 1 7 HELIX 51 51 ARG D 263 LYS D 267 5 5 SHEET 1 A 6 PHE A 129 TYR A 136 0 SHEET 2 A 6 TYR A 23 GLY A 30 -1 N ILE A 25 O VAL A 134 SHEET 3 A 6 GLU A 77 LEU A 82 -1 O LEU A 82 N ILE A 24 SHEET 4 A 6 VAL A 68 ASP A 74 -1 N LEU A 70 O LEU A 81 SHEET 5 A 6 THR A 212 VAL A 215 -1 O ILE A 214 N ALA A 71 SHEET 6 A 6 LYS A 247 TYR A 249 -1 O TYR A 249 N ILE A 213 SHEET 1 B 6 PHE B 129 TYR B 136 0 SHEET 2 B 6 TYR B 23 GLY B 30 -1 N ILE B 25 O VAL B 134 SHEET 3 B 6 GLU B 77 LEU B 82 -1 O LEU B 82 N ILE B 24 SHEET 4 B 6 VAL B 68 ASP B 74 -1 N LEU B 70 O LEU B 81 SHEET 5 B 6 THR B 212 VAL B 215 -1 O ILE B 214 N ALA B 71 SHEET 6 B 6 LYS B 247 TYR B 249 -1 O LYS B 247 N VAL B 215 SHEET 1 C 6 PHE C 129 TYR C 136 0 SHEET 2 C 6 TYR C 23 GLY C 30 -1 N ARG C 27 O ARG C 132 SHEET 3 C 6 GLU C 77 LEU C 82 -1 O LEU C 82 N ILE C 24 SHEET 4 C 6 VAL C 68 ASP C 74 -1 N LEU C 70 O LEU C 81 SHEET 5 C 6 THR C 212 VAL C 215 -1 O ILE C 214 N ALA C 71 SHEET 6 C 6 LYS C 247 TYR C 249 -1 O LYS C 247 N VAL C 215 SHEET 1 D 6 PHE D 129 TYR D 136 0 SHEET 2 D 6 TYR D 23 GLY D 30 -1 N ARG D 27 O ARG D 132 SHEET 3 D 6 GLU D 77 LEU D 82 -1 O LEU D 82 N ILE D 24 SHEET 4 D 6 VAL D 68 ASP D 74 -1 N LEU D 70 O LEU D 81 SHEET 5 D 6 THR D 212 VAL D 215 -1 O ILE D 214 N ALA D 71 SHEET 6 D 6 LYS D 247 TYR D 249 -1 O LYS D 247 N VAL D 215 CISPEP 1 LYS A 44 PRO A 45 0 0.14 CISPEP 2 LYS B 44 PRO B 45 0 0.71 CISPEP 3 LYS C 44 PRO C 45 0 1.04 CISPEP 4 LYS D 44 PRO D 45 0 -0.08 CRYST1 96.740 96.740 299.360 90.00 90.00 120.00 P 31 2 1 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010337 0.005968 0.000000 0.00000 SCALE2 0.000000 0.011936 0.000000 0.00000 SCALE3 0.000000 0.000000 0.003340 0.00000