data_3WDN # _entry.id 3WDN # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.381 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3WDN pdb_00003wdn 10.2210/pdb3wdn/pdb RCSB RCSB096203 ? ? WWPDB D_1000096203 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3WDN _pdbx_database_status.recvd_initial_deposition_date 2013-06-19 _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Higashiura, A.' 1 'Nakagawa, A.' 2 # _citation.id primary _citation.title 'High-resolution X-ray crystal structure of bovine H-protein using the high-pressure cryocooling method' _citation.journal_abbrev 'J.SYNCHROTRON RADIAT.' _citation.journal_volume 20 _citation.page_first 989 _citation.page_last 993 _citation.year 2013 _citation.journal_id_ASTM JSYRES _citation.country DK _citation.journal_id_ISSN 0909-0495 _citation.journal_id_CSD 1210 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 24121354 _citation.pdbx_database_id_DOI 10.1107/S090904951302373X # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Higashiura, A.' 1 ? primary 'Ohta, K.' 2 ? primary 'Masaki, M.' 3 ? primary 'Sato, M.' 4 ? primary 'Inaka, K.' 5 ? primary 'Tanaka, H.' 6 ? primary 'Nakagawa, A.' 7 ? # _cell.entry_id 3WDN _cell.length_a 84.870 _cell.length_b 41.415 _cell.length_c 43.317 _cell.angle_alpha 90.00 _cell.angle_beta 91.72 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3WDN _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Glycine cleavage system H protein, mitochondrial' 13858.369 1 ? ? ? ? 2 non-polymer syn GLYCEROL 92.094 2 ? ? ? ? 3 water nat water 18.015 292 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;SVRKFTEKHEWVTTENGVGTVGISNFAQEALGDVVYCSLPEVGTKLNKQEEFGALESVKAASELYSPLSGEVTEINKALA ENPGLVNKSCYEDGWLIKMTFSNPSELDELMSEEAYEKYIKSIEE ; _entity_poly.pdbx_seq_one_letter_code_can ;SVRKFTEKHEWVTTENGVGTVGISNFAQEALGDVVYCSLPEVGTKLNKQEEFGALESVKAASELYSPLSGEVTEINKALA ENPGLVNKSCYEDGWLIKMTFSNPSELDELMSEEAYEKYIKSIEE ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 VAL n 1 3 ARG n 1 4 LYS n 1 5 PHE n 1 6 THR n 1 7 GLU n 1 8 LYS n 1 9 HIS n 1 10 GLU n 1 11 TRP n 1 12 VAL n 1 13 THR n 1 14 THR n 1 15 GLU n 1 16 ASN n 1 17 GLY n 1 18 VAL n 1 19 GLY n 1 20 THR n 1 21 VAL n 1 22 GLY n 1 23 ILE n 1 24 SER n 1 25 ASN n 1 26 PHE n 1 27 ALA n 1 28 GLN n 1 29 GLU n 1 30 ALA n 1 31 LEU n 1 32 GLY n 1 33 ASP n 1 34 VAL n 1 35 VAL n 1 36 TYR n 1 37 CYS n 1 38 SER n 1 39 LEU n 1 40 PRO n 1 41 GLU n 1 42 VAL n 1 43 GLY n 1 44 THR n 1 45 LYS n 1 46 LEU n 1 47 ASN n 1 48 LYS n 1 49 GLN n 1 50 GLU n 1 51 GLU n 1 52 PHE n 1 53 GLY n 1 54 ALA n 1 55 LEU n 1 56 GLU n 1 57 SER n 1 58 VAL n 1 59 LYS n 1 60 ALA n 1 61 ALA n 1 62 SER n 1 63 GLU n 1 64 LEU n 1 65 TYR n 1 66 SER n 1 67 PRO n 1 68 LEU n 1 69 SER n 1 70 GLY n 1 71 GLU n 1 72 VAL n 1 73 THR n 1 74 GLU n 1 75 ILE n 1 76 ASN n 1 77 LYS n 1 78 ALA n 1 79 LEU n 1 80 ALA n 1 81 GLU n 1 82 ASN n 1 83 PRO n 1 84 GLY n 1 85 LEU n 1 86 VAL n 1 87 ASN n 1 88 LYS n 1 89 SER n 1 90 CYS n 1 91 TYR n 1 92 GLU n 1 93 ASP n 1 94 GLY n 1 95 TRP n 1 96 LEU n 1 97 ILE n 1 98 LYS n 1 99 MET n 1 100 THR n 1 101 PHE n 1 102 SER n 1 103 ASN n 1 104 PRO n 1 105 SER n 1 106 GLU n 1 107 LEU n 1 108 ASP n 1 109 GLU n 1 110 LEU n 1 111 MET n 1 112 SER n 1 113 GLU n 1 114 GLU n 1 115 ALA n 1 116 TYR n 1 117 GLU n 1 118 LYS n 1 119 TYR n 1 120 ILE n 1 121 LYS n 1 122 SER n 1 123 ILE n 1 124 GLU n 1 125 GLU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name 'bovine,cow,domestic cattle,domestic cow' _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene GCSH _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Bos taurus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9913 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'Bl21(de3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET30a _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code GCSH_BOVIN _struct_ref.pdbx_db_accession P20821 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;SVRKFTEKHEWVTTENGVGTVGISNFAQEALGDVVYCSLPEVGTKLNKQEEFGALESVKAASELYSPLSGEVTEINKALA ENPGLVNKSCYEDGWLIKMTFSNPSELDELMSEEAYEKYIKSIEE ; _struct_ref.pdbx_align_begin 49 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3WDN _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 125 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P20821 _struct_ref_seq.db_align_beg 49 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 173 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 125 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 3WDN _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.75 _exptl_crystal.density_percent_sol 55.20 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 288 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 3.0 _exptl_crystal_grow.pdbx_details '0.6-1.6M ammonium sulphate, 0-30% glycerol, 0.1M sodium citrate, pH 3.0, VAPOR DIFFUSION, HANGING DROP, temperature 288K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 90 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'RAYONIX MX225HE' _diffrn_detector.pdbx_collection_date 2011-04-24 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Si 111 CHANNEL' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.7 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'SPRING-8 BEAMLINE BL44XU' _diffrn_source.pdbx_synchrotron_site SPring-8 _diffrn_source.pdbx_synchrotron_beamline BL44XU _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.7 # _reflns.entry_id 3WDN _reflns.observed_criterion_sigma_I 2.85 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 30.7 _reflns.d_resolution_high 0.86 _reflns.number_obs 126382 _reflns.number_all ? _reflns.percent_possible_obs 99.8 _reflns.pdbx_Rmerge_I_obs 0.059 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 44.7 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 5.9 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 0.86 _reflns_shell.d_res_low 0.87 _reflns_shell.percent_possible_all 99.3 _reflns_shell.Rmerge_I_obs 0.496 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 2.85 _reflns_shell.pdbx_redundancy 3.6 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 3126 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.number_possible ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.meanI_over_sigI_all ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 3WDN _refine.ls_number_reflns_obs 126382 _refine.ls_number_reflns_all 126382 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 30.7 _refine.ls_d_res_high 0.86 _refine.ls_percent_reflns_obs ? _refine.ls_R_factor_obs ? _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.114 _refine.ls_R_factor_R_free 0.139 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 10.8 _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model 3KLR _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 973 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 12 _refine_hist.number_atoms_solvent 292 _refine_hist.number_atoms_total 1277 _refine_hist.d_res_high 0.86 _refine_hist.d_res_low 30.7 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id s_bond_d 0.017 ? ? ? ? 'X-RAY DIFFRACTION' s_angle_d 2.206 ? ? ? ? 'X-RAY DIFFRACTION' # _pdbx_refine.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine.entry_id 3WDN _pdbx_refine.R_factor_all_no_cutoff ? _pdbx_refine.R_factor_obs_no_cutoff 0.114 _pdbx_refine.free_R_factor_no_cutoff 0.139 _pdbx_refine.free_R_error_no_cutoff ? _pdbx_refine.free_R_val_test_set_size_perc_no_cutoff ? _pdbx_refine.free_R_val_test_set_ct_no_cutoff ? _pdbx_refine.R_factor_all_4sig_cutoff ? _pdbx_refine.R_factor_obs_4sig_cutoff ? _pdbx_refine.free_R_factor_4sig_cutoff ? _pdbx_refine.free_R_val_test_set_size_perc_4sig_cutoff ? _pdbx_refine.free_R_val_test_set_ct_4sig_cutoff ? _pdbx_refine.number_reflns_obs_4sig_cutoff ? # _struct.entry_id 3WDN _struct.title 'High-resolution X-ray crystal structure of bovine H-protein using a high-pressure cryocooling method' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3WDN _struct_keywords.pdbx_keywords OXIDOREDUCTASE _struct_keywords.text 'antiparallel beta sheet, beta sandwich, OXIDOREDUCTASE' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 3 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 24 ? GLY A 32 ? SER A 24 GLY A 32 1 ? 9 HELX_P HELX_P2 2 LYS A 77 ? ALA A 80 ? LYS A 77 ALA A 80 5 ? 4 HELX_P HELX_P3 3 GLY A 84 ? SER A 89 ? GLY A 84 SER A 89 1 ? 6 HELX_P HELX_P4 4 ASN A 103 ? LEU A 110 ? ASN A 103 LEU A 110 5 ? 8 HELX_P HELX_P5 5 GLU A 113 ? GLU A 125 ? GLU A 113 GLU A 125 1 ? 13 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 7 ? B ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel A 6 7 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 LYS A 45 ? LEU A 46 ? LYS A 45 LEU A 46 A 2 GLY A 70 ? ILE A 75 ? GLY A 70 ILE A 75 A 3 ILE A 97 ? PHE A 101 ? ILE A 97 PHE A 101 A 4 VAL A 18 ? ILE A 23 ? VAL A 18 ILE A 23 A 5 GLU A 10 ? GLU A 15 ? GLU A 10 GLU A 15 A 6 LYS A 4 ? PHE A 5 ? LYS A 4 PHE A 5 A 7 MET A 111 ? SER A 112 ? MET A 111 SER A 112 B 1 VAL A 34 ? SER A 38 ? VAL A 34 SER A 38 B 2 GLU A 51 ? SER A 57 ? GLU A 51 SER A 57 B 3 ALA A 61 ? TYR A 65 ? ALA A 61 TYR A 65 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N LEU A 46 ? N LEU A 46 O GLY A 70 ? O GLY A 70 A 2 3 N THR A 73 ? N THR A 73 O LYS A 98 ? O LYS A 98 A 3 4 O MET A 99 ? O MET A 99 N GLY A 19 ? N GLY A 19 A 4 5 O THR A 20 ? O THR A 20 N THR A 13 ? N THR A 13 A 5 6 O VAL A 12 ? O VAL A 12 N LYS A 4 ? N LYS A 4 A 6 7 N PHE A 5 ? N PHE A 5 O MET A 111 ? O MET A 111 B 1 2 N SER A 38 ? N SER A 38 O ALA A 54 ? O ALA A 54 B 2 3 N GLY A 53 ? N GLY A 53 O LEU A 64 ? O LEU A 64 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A GOL 201 ? 12 'BINDING SITE FOR RESIDUE GOL A 201' AC2 Software A GOL 202 ? 7 'BINDING SITE FOR RESIDUE GOL A 202' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 12 ASN A 25 ? ASN A 25 . ? 1_555 ? 2 AC1 12 LYS A 59 ? LYS A 59 . ? 4_556 ? 3 AC1 12 ALA A 60 ? ALA A 60 . ? 4_556 ? 4 AC1 12 ASN A 87 ? ASN A 87 . ? 1_555 ? 5 AC1 12 LYS A 88 ? LYS A 88 . ? 1_555 ? 6 AC1 12 SER A 89 ? SER A 89 . ? 1_555 ? 7 AC1 12 CYS A 90 ? CYS A 90 . ? 1_555 ? 8 AC1 12 HOH D . ? HOH A 316 . ? 1_555 ? 9 AC1 12 HOH D . ? HOH A 328 . ? 1_555 ? 10 AC1 12 HOH D . ? HOH A 432 . ? 4_556 ? 11 AC1 12 HOH D . ? HOH A 466 . ? 1_555 ? 12 AC1 12 HOH D . ? HOH A 467 . ? 1_555 ? 13 AC2 7 ARG A 3 ? ARG A 3 . ? 1_555 ? 14 AC2 7 LYS A 59 ? LYS A 59 . ? 4_556 ? 15 AC2 7 GLU A 113 ? GLU A 113 . ? 1_555 ? 16 AC2 7 HOH D . ? HOH A 413 . ? 1_555 ? 17 AC2 7 HOH D . ? HOH A 424 . ? 1_555 ? 18 AC2 7 HOH D . ? HOH A 505 . ? 4_556 ? 19 AC2 7 HOH D . ? HOH A 575 . ? 1_555 ? # _database_PDB_matrix.entry_id 3WDN _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3WDN _atom_sites.fract_transf_matrix[1][1] 0.011783 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000354 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.024146 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.023096 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 1 1 SER SER A . n A 1 2 VAL 2 2 2 VAL VAL A . n A 1 3 ARG 3 3 3 ARG ARG A . n A 1 4 LYS 4 4 4 LYS LYS A . n A 1 5 PHE 5 5 5 PHE PHE A . n A 1 6 THR 6 6 6 THR THR A . n A 1 7 GLU 7 7 7 GLU GLU A . n A 1 8 LYS 8 8 8 LYS LYS A . n A 1 9 HIS 9 9 9 HIS HIS A . n A 1 10 GLU 10 10 10 GLU GLU A . n A 1 11 TRP 11 11 11 TRP TRP A . n A 1 12 VAL 12 12 12 VAL VAL A . n A 1 13 THR 13 13 13 THR THR A . n A 1 14 THR 14 14 14 THR THR A . n A 1 15 GLU 15 15 15 GLU GLU A . n A 1 16 ASN 16 16 16 ASN ASN A . n A 1 17 GLY 17 17 17 GLY GLY A . n A 1 18 VAL 18 18 18 VAL VAL A . n A 1 19 GLY 19 19 19 GLY GLY A . n A 1 20 THR 20 20 20 THR THR A . n A 1 21 VAL 21 21 21 VAL VAL A . n A 1 22 GLY 22 22 22 GLY GLY A . n A 1 23 ILE 23 23 23 ILE ILE A . n A 1 24 SER 24 24 24 SER SER A . n A 1 25 ASN 25 25 25 ASN ASN A . n A 1 26 PHE 26 26 26 PHE PHE A . n A 1 27 ALA 27 27 27 ALA ALA A . n A 1 28 GLN 28 28 28 GLN GLN A . n A 1 29 GLU 29 29 29 GLU GLU A . n A 1 30 ALA 30 30 30 ALA ALA A . n A 1 31 LEU 31 31 31 LEU LEU A . n A 1 32 GLY 32 32 32 GLY GLY A . n A 1 33 ASP 33 33 33 ASP ASP A . n A 1 34 VAL 34 34 34 VAL VAL A . n A 1 35 VAL 35 35 35 VAL VAL A . n A 1 36 TYR 36 36 36 TYR TYR A . n A 1 37 CYS 37 37 37 CYS CYS A . n A 1 38 SER 38 38 38 SER SER A . n A 1 39 LEU 39 39 39 LEU LEU A . n A 1 40 PRO 40 40 40 PRO PRO A . n A 1 41 GLU 41 41 41 GLU GLU A . n A 1 42 VAL 42 42 42 VAL VAL A . n A 1 43 GLY 43 43 43 GLY GLY A . n A 1 44 THR 44 44 44 THR THR A . n A 1 45 LYS 45 45 45 LYS LYS A . n A 1 46 LEU 46 46 46 LEU LEU A . n A 1 47 ASN 47 47 47 ASN ASN A . n A 1 48 LYS 48 48 48 LYS LYS A . n A 1 49 GLN 49 49 49 GLN GLN A . n A 1 50 GLU 50 50 50 GLU GLU A . n A 1 51 GLU 51 51 51 GLU GLU A . n A 1 52 PHE 52 52 52 PHE PHE A . n A 1 53 GLY 53 53 53 GLY GLY A . n A 1 54 ALA 54 54 54 ALA ALA A . n A 1 55 LEU 55 55 55 LEU LEU A . n A 1 56 GLU 56 56 56 GLU GLU A . n A 1 57 SER 57 57 57 SER SER A . n A 1 58 VAL 58 58 58 VAL VAL A . n A 1 59 LYS 59 59 59 LYS LYS A . n A 1 60 ALA 60 60 60 ALA ALA A . n A 1 61 ALA 61 61 61 ALA ALA A . n A 1 62 SER 62 62 62 SER SER A . n A 1 63 GLU 63 63 63 GLU GLU A . n A 1 64 LEU 64 64 64 LEU LEU A . n A 1 65 TYR 65 65 65 TYR TYR A . n A 1 66 SER 66 66 66 SER SER A . n A 1 67 PRO 67 67 67 PRO PRO A . n A 1 68 LEU 68 68 68 LEU LEU A . n A 1 69 SER 69 69 69 SER SER A . n A 1 70 GLY 70 70 70 GLY GLY A . n A 1 71 GLU 71 71 71 GLU GLU A . n A 1 72 VAL 72 72 72 VAL VAL A . n A 1 73 THR 73 73 73 THR THR A . n A 1 74 GLU 74 74 74 GLU GLU A . n A 1 75 ILE 75 75 75 ILE ILE A . n A 1 76 ASN 76 76 76 ASN ASN A . n A 1 77 LYS 77 77 77 LYS LYS A . n A 1 78 ALA 78 78 78 ALA ALA A . n A 1 79 LEU 79 79 79 LEU LEU A . n A 1 80 ALA 80 80 80 ALA ALA A . n A 1 81 GLU 81 81 81 GLU GLU A . n A 1 82 ASN 82 82 82 ASN ASN A . n A 1 83 PRO 83 83 83 PRO PRO A . n A 1 84 GLY 84 84 84 GLY GLY A . n A 1 85 LEU 85 85 85 LEU LEU A . n A 1 86 VAL 86 86 86 VAL VAL A . n A 1 87 ASN 87 87 87 ASN ASN A . n A 1 88 LYS 88 88 88 LYS LYS A . n A 1 89 SER 89 89 89 SER SER A . n A 1 90 CYS 90 90 90 CYS CYS A . n A 1 91 TYR 91 91 91 TYR TYR A . n A 1 92 GLU 92 92 92 GLU GLU A . n A 1 93 ASP 93 93 93 ASP ASP A . n A 1 94 GLY 94 94 94 GLY GLY A . n A 1 95 TRP 95 95 95 TRP TRP A . n A 1 96 LEU 96 96 96 LEU LEU A . n A 1 97 ILE 97 97 97 ILE ILE A . n A 1 98 LYS 98 98 98 LYS LYS A . n A 1 99 MET 99 99 99 MET MET A . n A 1 100 THR 100 100 100 THR THR A . n A 1 101 PHE 101 101 101 PHE PHE A . n A 1 102 SER 102 102 102 SER SER A . n A 1 103 ASN 103 103 103 ASN ASN A . n A 1 104 PRO 104 104 104 PRO PRO A . n A 1 105 SER 105 105 105 SER SER A . n A 1 106 GLU 106 106 106 GLU GLU A . n A 1 107 LEU 107 107 107 LEU LEU A . n A 1 108 ASP 108 108 108 ASP ASP A . n A 1 109 GLU 109 109 109 GLU GLU A . n A 1 110 LEU 110 110 110 LEU LEU A . n A 1 111 MET 111 111 111 MET MET A . n A 1 112 SER 112 112 112 SER SER A . n A 1 113 GLU 113 113 113 GLU GLU A . n A 1 114 GLU 114 114 114 GLU GLU A . n A 1 115 ALA 115 115 115 ALA ALA A . n A 1 116 TYR 116 116 116 TYR TYR A . n A 1 117 GLU 117 117 117 GLU GLU A . n A 1 118 LYS 118 118 118 LYS LYS A . n A 1 119 TYR 119 119 119 TYR TYR A . n A 1 120 ILE 120 120 120 ILE ILE A . n A 1 121 LYS 121 121 121 LYS LYS A . n A 1 122 SER 122 122 122 SER SER A . n A 1 123 ILE 123 123 123 ILE ILE A . n A 1 124 GLU 124 124 124 GLU GLU A . n A 1 125 GLU 125 125 125 GLU GLU A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GOL 1 201 1 GOL GOL A . C 2 GOL 1 202 2 GOL GOL A . D 3 HOH 1 301 1 HOH HOH A . D 3 HOH 2 302 2 HOH HOH A . D 3 HOH 3 303 3 HOH HOH A . D 3 HOH 4 304 4 HOH HOH A . D 3 HOH 5 305 5 HOH HOH A . D 3 HOH 6 306 6 HOH HOH A . D 3 HOH 7 307 7 HOH HOH A . D 3 HOH 8 308 8 HOH HOH A . D 3 HOH 9 309 9 HOH HOH A . D 3 HOH 10 310 10 HOH HOH A . D 3 HOH 11 311 11 HOH HOH A . D 3 HOH 12 312 12 HOH HOH A . D 3 HOH 13 313 13 HOH HOH A . D 3 HOH 14 314 14 HOH HOH A . D 3 HOH 15 315 15 HOH HOH A . D 3 HOH 16 316 16 HOH HOH A . D 3 HOH 17 317 17 HOH HOH A . D 3 HOH 18 318 18 HOH HOH A . D 3 HOH 19 319 19 HOH HOH A . D 3 HOH 20 320 20 HOH HOH A . D 3 HOH 21 321 21 HOH HOH A . D 3 HOH 22 322 22 HOH HOH A . D 3 HOH 23 323 23 HOH HOH A . D 3 HOH 24 324 24 HOH HOH A . D 3 HOH 25 325 25 HOH HOH A . D 3 HOH 26 326 26 HOH HOH A . D 3 HOH 27 327 27 HOH HOH A . D 3 HOH 28 328 28 HOH HOH A . D 3 HOH 29 329 29 HOH HOH A . D 3 HOH 30 330 30 HOH HOH A . D 3 HOH 31 331 31 HOH HOH A . D 3 HOH 32 332 32 HOH HOH A . D 3 HOH 33 333 33 HOH HOH A . D 3 HOH 34 334 34 HOH HOH A . D 3 HOH 35 335 35 HOH HOH A . D 3 HOH 36 336 36 HOH HOH A . D 3 HOH 37 337 37 HOH HOH A . D 3 HOH 38 338 38 HOH HOH A . D 3 HOH 39 339 39 HOH HOH A . D 3 HOH 40 340 40 HOH HOH A . D 3 HOH 41 341 41 HOH HOH A . D 3 HOH 42 342 42 HOH HOH A . D 3 HOH 43 343 43 HOH HOH A . D 3 HOH 44 344 44 HOH HOH A . D 3 HOH 45 345 45 HOH HOH A . D 3 HOH 46 346 46 HOH HOH A . D 3 HOH 47 347 47 HOH HOH A . D 3 HOH 48 348 48 HOH HOH A . D 3 HOH 49 349 49 HOH HOH A . D 3 HOH 50 350 50 HOH HOH A . D 3 HOH 51 351 51 HOH HOH A . D 3 HOH 52 352 52 HOH HOH A . D 3 HOH 53 353 53 HOH HOH A . D 3 HOH 54 354 54 HOH HOH A . D 3 HOH 55 355 55 HOH HOH A . D 3 HOH 56 356 56 HOH HOH A . D 3 HOH 57 357 57 HOH HOH A . D 3 HOH 58 358 58 HOH HOH A . D 3 HOH 59 359 59 HOH HOH A . D 3 HOH 60 360 60 HOH HOH A . D 3 HOH 61 361 61 HOH HOH A . D 3 HOH 62 362 62 HOH HOH A . D 3 HOH 63 363 63 HOH HOH A . D 3 HOH 64 364 64 HOH HOH A . D 3 HOH 65 365 65 HOH HOH A . D 3 HOH 66 366 66 HOH HOH A . D 3 HOH 67 367 67 HOH HOH A . D 3 HOH 68 368 68 HOH HOH A . D 3 HOH 69 369 69 HOH HOH A . D 3 HOH 70 370 70 HOH HOH A . D 3 HOH 71 371 71 HOH HOH A . D 3 HOH 72 372 72 HOH HOH A . D 3 HOH 73 373 73 HOH HOH A . D 3 HOH 74 374 74 HOH HOH A . D 3 HOH 75 375 75 HOH HOH A . D 3 HOH 76 376 76 HOH HOH A . D 3 HOH 77 377 77 HOH HOH A . D 3 HOH 78 378 78 HOH HOH A . D 3 HOH 79 379 79 HOH HOH A . D 3 HOH 80 380 80 HOH HOH A . D 3 HOH 81 381 81 HOH HOH A . D 3 HOH 82 382 82 HOH HOH A . D 3 HOH 83 383 83 HOH HOH A . D 3 HOH 84 384 84 HOH HOH A . D 3 HOH 85 385 85 HOH HOH A . D 3 HOH 86 386 86 HOH HOH A . D 3 HOH 87 387 87 HOH HOH A . D 3 HOH 88 388 88 HOH HOH A . D 3 HOH 89 389 89 HOH HOH A . D 3 HOH 90 390 90 HOH HOH A . D 3 HOH 91 391 91 HOH HOH A . D 3 HOH 92 392 92 HOH HOH A . D 3 HOH 93 393 93 HOH HOH A . D 3 HOH 94 394 94 HOH HOH A . D 3 HOH 95 395 95 HOH HOH A . D 3 HOH 96 396 96 HOH HOH A . D 3 HOH 97 397 97 HOH HOH A . D 3 HOH 98 398 98 HOH HOH A . D 3 HOH 99 399 99 HOH HOH A . D 3 HOH 100 400 100 HOH HOH A . D 3 HOH 101 401 101 HOH HOH A . D 3 HOH 102 402 102 HOH HOH A . D 3 HOH 103 403 103 HOH HOH A . D 3 HOH 104 404 104 HOH HOH A . D 3 HOH 105 405 105 HOH HOH A . D 3 HOH 106 406 106 HOH HOH A . D 3 HOH 107 407 107 HOH HOH A . D 3 HOH 108 408 108 HOH HOH A . D 3 HOH 109 409 109 HOH HOH A . D 3 HOH 110 410 110 HOH HOH A . D 3 HOH 111 411 111 HOH HOH A . D 3 HOH 112 412 112 HOH HOH A . D 3 HOH 113 413 113 HOH HOH A . D 3 HOH 114 414 114 HOH HOH A . D 3 HOH 115 415 115 HOH HOH A . D 3 HOH 116 416 116 HOH HOH A . D 3 HOH 117 417 117 HOH HOH A . D 3 HOH 118 418 118 HOH HOH A . D 3 HOH 119 419 119 HOH HOH A . D 3 HOH 120 420 120 HOH HOH A . D 3 HOH 121 421 121 HOH HOH A . D 3 HOH 122 422 122 HOH HOH A . D 3 HOH 123 423 123 HOH HOH A . D 3 HOH 124 424 124 HOH HOH A . D 3 HOH 125 425 125 HOH HOH A . D 3 HOH 126 426 126 HOH HOH A . D 3 HOH 127 427 127 HOH HOH A . D 3 HOH 128 428 128 HOH HOH A . D 3 HOH 129 429 129 HOH HOH A . D 3 HOH 130 430 130 HOH HOH A . D 3 HOH 131 431 131 HOH HOH A . D 3 HOH 132 432 132 HOH HOH A . D 3 HOH 133 433 133 HOH HOH A . D 3 HOH 134 434 134 HOH HOH A . D 3 HOH 135 435 135 HOH HOH A . D 3 HOH 136 436 136 HOH HOH A . D 3 HOH 137 437 137 HOH HOH A . D 3 HOH 138 438 138 HOH HOH A . D 3 HOH 139 439 139 HOH HOH A . D 3 HOH 140 440 140 HOH HOH A . D 3 HOH 141 441 141 HOH HOH A . D 3 HOH 142 442 142 HOH HOH A . D 3 HOH 143 443 143 HOH HOH A . D 3 HOH 144 444 144 HOH HOH A . D 3 HOH 145 445 145 HOH HOH A . D 3 HOH 146 446 146 HOH HOH A . D 3 HOH 147 447 147 HOH HOH A . D 3 HOH 148 448 148 HOH HOH A . D 3 HOH 149 449 149 HOH HOH A . D 3 HOH 150 450 150 HOH HOH A . D 3 HOH 151 451 151 HOH HOH A . D 3 HOH 152 452 152 HOH HOH A . D 3 HOH 153 453 153 HOH HOH A . D 3 HOH 154 454 154 HOH HOH A . D 3 HOH 155 455 155 HOH HOH A . D 3 HOH 156 456 156 HOH HOH A . D 3 HOH 157 457 157 HOH HOH A . D 3 HOH 158 458 158 HOH HOH A . D 3 HOH 159 459 159 HOH HOH A . D 3 HOH 160 460 160 HOH HOH A . D 3 HOH 161 461 161 HOH HOH A . D 3 HOH 162 462 162 HOH HOH A . D 3 HOH 163 463 163 HOH HOH A . D 3 HOH 164 464 164 HOH HOH A . D 3 HOH 165 465 165 HOH HOH A . D 3 HOH 166 466 166 HOH HOH A . D 3 HOH 167 467 167 HOH HOH A . D 3 HOH 168 468 168 HOH HOH A . D 3 HOH 169 469 169 HOH HOH A . D 3 HOH 170 470 170 HOH HOH A . D 3 HOH 171 471 171 HOH HOH A . D 3 HOH 172 472 172 HOH HOH A . D 3 HOH 173 473 173 HOH HOH A . D 3 HOH 174 474 174 HOH HOH A . D 3 HOH 175 475 175 HOH HOH A . D 3 HOH 176 476 176 HOH HOH A . D 3 HOH 177 477 177 HOH HOH A . D 3 HOH 178 478 178 HOH HOH A . D 3 HOH 179 479 179 HOH HOH A . D 3 HOH 180 480 180 HOH HOH A . D 3 HOH 181 481 181 HOH HOH A . D 3 HOH 182 482 182 HOH HOH A . D 3 HOH 183 483 183 HOH HOH A . D 3 HOH 184 484 184 HOH HOH A . D 3 HOH 185 485 185 HOH HOH A . D 3 HOH 186 486 186 HOH HOH A . D 3 HOH 187 487 187 HOH HOH A . D 3 HOH 188 488 188 HOH HOH A . D 3 HOH 189 489 189 HOH HOH A . D 3 HOH 190 490 190 HOH HOH A . D 3 HOH 191 491 191 HOH HOH A . D 3 HOH 192 492 192 HOH HOH A . D 3 HOH 193 493 193 HOH HOH A . D 3 HOH 194 494 194 HOH HOH A . D 3 HOH 195 495 195 HOH HOH A . D 3 HOH 196 496 196 HOH HOH A . D 3 HOH 197 497 197 HOH HOH A . D 3 HOH 198 498 198 HOH HOH A . D 3 HOH 199 499 199 HOH HOH A . D 3 HOH 200 500 200 HOH HOH A . D 3 HOH 201 501 201 HOH HOH A . D 3 HOH 202 502 202 HOH HOH A . D 3 HOH 203 503 203 HOH HOH A . D 3 HOH 204 504 204 HOH HOH A . D 3 HOH 205 505 205 HOH HOH A . D 3 HOH 206 506 206 HOH HOH A . D 3 HOH 207 507 207 HOH HOH A . D 3 HOH 208 508 208 HOH HOH A . D 3 HOH 209 509 209 HOH HOH A . D 3 HOH 210 510 210 HOH HOH A . D 3 HOH 211 511 211 HOH HOH A . D 3 HOH 212 512 212 HOH HOH A . D 3 HOH 213 513 213 HOH HOH A . D 3 HOH 214 514 214 HOH HOH A . D 3 HOH 215 515 215 HOH HOH A . D 3 HOH 216 516 216 HOH HOH A . D 3 HOH 217 517 217 HOH HOH A . D 3 HOH 218 518 218 HOH HOH A . D 3 HOH 219 519 219 HOH HOH A . D 3 HOH 220 520 220 HOH HOH A . D 3 HOH 221 521 221 HOH HOH A . D 3 HOH 222 522 222 HOH HOH A . D 3 HOH 223 523 223 HOH HOH A . D 3 HOH 224 524 224 HOH HOH A . D 3 HOH 225 525 225 HOH HOH A . D 3 HOH 226 526 226 HOH HOH A . D 3 HOH 227 527 227 HOH HOH A . D 3 HOH 228 528 228 HOH HOH A . D 3 HOH 229 529 229 HOH HOH A . D 3 HOH 230 530 230 HOH HOH A . D 3 HOH 231 531 231 HOH HOH A . D 3 HOH 232 532 232 HOH HOH A . D 3 HOH 233 533 233 HOH HOH A . D 3 HOH 234 534 234 HOH HOH A . D 3 HOH 235 535 235 HOH HOH A . D 3 HOH 236 536 236 HOH HOH A . D 3 HOH 237 537 237 HOH HOH A . D 3 HOH 238 538 238 HOH HOH A . D 3 HOH 239 539 239 HOH HOH A . D 3 HOH 240 540 240 HOH HOH A . D 3 HOH 241 541 241 HOH HOH A . D 3 HOH 242 542 242 HOH HOH A . D 3 HOH 243 543 243 HOH HOH A . D 3 HOH 244 544 244 HOH HOH A . D 3 HOH 245 545 245 HOH HOH A . D 3 HOH 246 546 246 HOH HOH A . D 3 HOH 247 547 247 HOH HOH A . D 3 HOH 248 548 248 HOH HOH A . D 3 HOH 249 549 249 HOH HOH A . D 3 HOH 250 550 250 HOH HOH A . D 3 HOH 251 551 251 HOH HOH A . D 3 HOH 252 552 252 HOH HOH A . D 3 HOH 253 553 253 HOH HOH A . D 3 HOH 254 554 254 HOH HOH A . D 3 HOH 255 555 255 HOH HOH A . D 3 HOH 256 556 256 HOH HOH A . D 3 HOH 257 557 257 HOH HOH A . D 3 HOH 258 558 258 HOH HOH A . D 3 HOH 259 559 259 HOH HOH A . D 3 HOH 260 560 260 HOH HOH A . D 3 HOH 261 561 261 HOH HOH A . D 3 HOH 262 562 262 HOH HOH A . D 3 HOH 263 563 263 HOH HOH A . D 3 HOH 264 564 264 HOH HOH A . D 3 HOH 265 565 265 HOH HOH A . D 3 HOH 266 566 266 HOH HOH A . D 3 HOH 267 567 267 HOH HOH A . D 3 HOH 268 568 268 HOH HOH A . D 3 HOH 269 569 269 HOH HOH A . D 3 HOH 270 570 270 HOH HOH A . D 3 HOH 271 571 271 HOH HOH A . D 3 HOH 272 572 272 HOH HOH A . D 3 HOH 273 573 273 HOH HOH A . D 3 HOH 274 574 274 HOH HOH A . D 3 HOH 275 575 275 HOH HOH A . D 3 HOH 276 576 276 HOH HOH A . D 3 HOH 277 577 277 HOH HOH A . D 3 HOH 278 578 278 HOH HOH A . D 3 HOH 279 579 279 HOH HOH A . D 3 HOH 280 580 280 HOH HOH A . D 3 HOH 281 581 281 HOH HOH A . D 3 HOH 282 582 282 HOH HOH A . D 3 HOH 283 583 283 HOH HOH A . D 3 HOH 284 584 284 HOH HOH A . D 3 HOH 285 585 285 HOH HOH A . D 3 HOH 286 586 286 HOH HOH A . D 3 HOH 287 587 287 HOH HOH A . D 3 HOH 288 588 288 HOH HOH A . D 3 HOH 289 589 289 HOH HOH A . D 3 HOH 290 590 290 HOH HOH A . D 3 HOH 291 591 291 HOH HOH A . D 3 HOH 292 592 292 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2013-10-30 2 'Structure model' 1 1 2013-12-11 3 'Structure model' 1 2 2023-11-08 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' Other 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' 5 3 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' chem_comp_atom 2 3 'Structure model' chem_comp_bond 3 3 'Structure model' database_2 4 3 'Structure model' pdbx_initial_refinement_model 5 3 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_struct_site.pdbx_auth_asym_id' 4 3 'Structure model' '_struct_site.pdbx_auth_comp_id' 5 3 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal SHELXL-97 refinement . ? 1 DENZO 'data reduction' . ? 2 SCALEPACK 'data scaling' . ? 3 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 NZ A LYS 4 ? B O A HOH 554 ? ? 0.98 2 1 OE2 A GLU 63 ? B O A HOH 544 ? ? 1.09 3 1 CE A LYS 59 ? B O A HOH 573 ? ? 1.54 4 1 NZ A LYS 59 ? A O A HOH 573 ? ? 1.57 5 1 NZ A LYS 59 ? B O A HOH 573 ? ? 1.60 6 1 NZ A LYS 59 ? B O A HOH 555 ? ? 1.65 7 1 ND2 A ASN 82 ? B O A HOH 532 ? ? 1.80 8 1 CE A LYS 59 ? A O A HOH 573 ? ? 1.87 9 1 OD1 A ASN 82 ? B O A HOH 484 ? ? 1.88 10 1 OD1 A ASP 33 ? B O A HOH 323 ? ? 1.93 11 1 OD1 A ASP 33 ? B O A HOH 365 ? ? 2.04 12 1 CD A GLU 63 ? B O A HOH 544 ? ? 2.10 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 CD A ARG 3 ? A NE A ARG 3 ? A CZ A ARG 3 ? A 135.43 123.60 11.83 1.40 N 2 1 CD A ARG 3 ? B NE A ARG 3 ? B CZ A ARG 3 ? B 134.30 123.60 10.70 1.40 N 3 1 NE A ARG 3 ? B CZ A ARG 3 ? B NH2 A ARG 3 ? B 116.17 120.30 -4.13 0.50 N 4 1 OE1 A GLU 15 ? ? CD A GLU 15 ? ? OE2 A GLU 15 ? ? 115.35 123.30 -7.95 1.20 N 5 1 O A LEU 107 ? B C A LEU 107 ? B N A ASP 108 ? ? 112.84 122.70 -9.86 1.60 Y 6 1 CA A ASP 108 ? ? C A ASP 108 ? ? N A GLU 109 ? B 102.35 117.20 -14.85 2.20 Y 7 1 O A ASP 108 ? ? C A ASP 108 ? ? N A GLU 109 ? B 136.78 122.70 14.08 1.60 Y 8 1 OE1 A GLU 109 ? B CD A GLU 109 ? B OE2 A GLU 109 ? B 111.07 123.30 -12.23 1.20 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 HIS A 9 ? ? 73.56 30.07 2 1 ASN A 16 ? ? 38.67 52.10 3 1 GLN A 49 ? ? 86.65 -10.62 4 1 GLN A 49 ? ? 79.29 -0.30 5 1 SER A 89 ? ? -150.44 58.37 6 1 GLU A 92 ? ? -129.62 -91.75 7 1 GLU A 92 ? ? -129.21 -91.70 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 GOL C1 C N N 137 GOL O1 O N N 138 GOL C2 C N N 139 GOL O2 O N N 140 GOL C3 C N N 141 GOL O3 O N N 142 GOL H11 H N N 143 GOL H12 H N N 144 GOL HO1 H N N 145 GOL H2 H N N 146 GOL HO2 H N N 147 GOL H31 H N N 148 GOL H32 H N N 149 GOL HO3 H N N 150 HIS N N N N 151 HIS CA C N S 152 HIS C C N N 153 HIS O O N N 154 HIS CB C N N 155 HIS CG C Y N 156 HIS ND1 N Y N 157 HIS CD2 C Y N 158 HIS CE1 C Y N 159 HIS NE2 N Y N 160 HIS OXT O N N 161 HIS H H N N 162 HIS H2 H N N 163 HIS HA H N N 164 HIS HB2 H N N 165 HIS HB3 H N N 166 HIS HD1 H N N 167 HIS HD2 H N N 168 HIS HE1 H N N 169 HIS HE2 H N N 170 HIS HXT H N N 171 HOH O O N N 172 HOH H1 H N N 173 HOH H2 H N N 174 ILE N N N N 175 ILE CA C N S 176 ILE C C N N 177 ILE O O N N 178 ILE CB C N S 179 ILE CG1 C N N 180 ILE CG2 C N N 181 ILE CD1 C N N 182 ILE OXT O N N 183 ILE H H N N 184 ILE H2 H N N 185 ILE HA H N N 186 ILE HB H N N 187 ILE HG12 H N N 188 ILE HG13 H N N 189 ILE HG21 H N N 190 ILE HG22 H N N 191 ILE HG23 H N N 192 ILE HD11 H N N 193 ILE HD12 H N N 194 ILE HD13 H N N 195 ILE HXT H N N 196 LEU N N N N 197 LEU CA C N S 198 LEU C C N N 199 LEU O O N N 200 LEU CB C N N 201 LEU CG C N N 202 LEU CD1 C N N 203 LEU CD2 C N N 204 LEU OXT O N N 205 LEU H H N N 206 LEU H2 H N N 207 LEU HA H N N 208 LEU HB2 H N N 209 LEU HB3 H N N 210 LEU HG H N N 211 LEU HD11 H N N 212 LEU HD12 H N N 213 LEU HD13 H N N 214 LEU HD21 H N N 215 LEU HD22 H N N 216 LEU HD23 H N N 217 LEU HXT H N N 218 LYS N N N N 219 LYS CA C N S 220 LYS C C N N 221 LYS O O N N 222 LYS CB C N N 223 LYS CG C N N 224 LYS CD C N N 225 LYS CE C N N 226 LYS NZ N N N 227 LYS OXT O N N 228 LYS H H N N 229 LYS H2 H N N 230 LYS HA H N N 231 LYS HB2 H N N 232 LYS HB3 H N N 233 LYS HG2 H N N 234 LYS HG3 H N N 235 LYS HD2 H N N 236 LYS HD3 H N N 237 LYS HE2 H N N 238 LYS HE3 H N N 239 LYS HZ1 H N N 240 LYS HZ2 H N N 241 LYS HZ3 H N N 242 LYS HXT H N N 243 MET N N N N 244 MET CA C N S 245 MET C C N N 246 MET O O N N 247 MET CB C N N 248 MET CG C N N 249 MET SD S N N 250 MET CE C N N 251 MET OXT O N N 252 MET H H N N 253 MET H2 H N N 254 MET HA H N N 255 MET HB2 H N N 256 MET HB3 H N N 257 MET HG2 H N N 258 MET HG3 H N N 259 MET HE1 H N N 260 MET HE2 H N N 261 MET HE3 H N N 262 MET HXT H N N 263 PHE N N N N 264 PHE CA C N S 265 PHE C C N N 266 PHE O O N N 267 PHE CB C N N 268 PHE CG C Y N 269 PHE CD1 C Y N 270 PHE CD2 C Y N 271 PHE CE1 C Y N 272 PHE CE2 C Y N 273 PHE CZ C Y N 274 PHE OXT O N N 275 PHE H H N N 276 PHE H2 H N N 277 PHE HA H N N 278 PHE HB2 H N N 279 PHE HB3 H N N 280 PHE HD1 H N N 281 PHE HD2 H N N 282 PHE HE1 H N N 283 PHE HE2 H N N 284 PHE HZ H N N 285 PHE HXT H N N 286 PRO N N N N 287 PRO CA C N S 288 PRO C C N N 289 PRO O O N N 290 PRO CB C N N 291 PRO CG C N N 292 PRO CD C N N 293 PRO OXT O N N 294 PRO H H N N 295 PRO HA H N N 296 PRO HB2 H N N 297 PRO HB3 H N N 298 PRO HG2 H N N 299 PRO HG3 H N N 300 PRO HD2 H N N 301 PRO HD3 H N N 302 PRO HXT H N N 303 SER N N N N 304 SER CA C N S 305 SER C C N N 306 SER O O N N 307 SER CB C N N 308 SER OG O N N 309 SER OXT O N N 310 SER H H N N 311 SER H2 H N N 312 SER HA H N N 313 SER HB2 H N N 314 SER HB3 H N N 315 SER HG H N N 316 SER HXT H N N 317 THR N N N N 318 THR CA C N S 319 THR C C N N 320 THR O O N N 321 THR CB C N R 322 THR OG1 O N N 323 THR CG2 C N N 324 THR OXT O N N 325 THR H H N N 326 THR H2 H N N 327 THR HA H N N 328 THR HB H N N 329 THR HG1 H N N 330 THR HG21 H N N 331 THR HG22 H N N 332 THR HG23 H N N 333 THR HXT H N N 334 TRP N N N N 335 TRP CA C N S 336 TRP C C N N 337 TRP O O N N 338 TRP CB C N N 339 TRP CG C Y N 340 TRP CD1 C Y N 341 TRP CD2 C Y N 342 TRP NE1 N Y N 343 TRP CE2 C Y N 344 TRP CE3 C Y N 345 TRP CZ2 C Y N 346 TRP CZ3 C Y N 347 TRP CH2 C Y N 348 TRP OXT O N N 349 TRP H H N N 350 TRP H2 H N N 351 TRP HA H N N 352 TRP HB2 H N N 353 TRP HB3 H N N 354 TRP HD1 H N N 355 TRP HE1 H N N 356 TRP HE3 H N N 357 TRP HZ2 H N N 358 TRP HZ3 H N N 359 TRP HH2 H N N 360 TRP HXT H N N 361 TYR N N N N 362 TYR CA C N S 363 TYR C C N N 364 TYR O O N N 365 TYR CB C N N 366 TYR CG C Y N 367 TYR CD1 C Y N 368 TYR CD2 C Y N 369 TYR CE1 C Y N 370 TYR CE2 C Y N 371 TYR CZ C Y N 372 TYR OH O N N 373 TYR OXT O N N 374 TYR H H N N 375 TYR H2 H N N 376 TYR HA H N N 377 TYR HB2 H N N 378 TYR HB3 H N N 379 TYR HD1 H N N 380 TYR HD2 H N N 381 TYR HE1 H N N 382 TYR HE2 H N N 383 TYR HH H N N 384 TYR HXT H N N 385 VAL N N N N 386 VAL CA C N S 387 VAL C C N N 388 VAL O O N N 389 VAL CB C N N 390 VAL CG1 C N N 391 VAL CG2 C N N 392 VAL OXT O N N 393 VAL H H N N 394 VAL H2 H N N 395 VAL HA H N N 396 VAL HB H N N 397 VAL HG11 H N N 398 VAL HG12 H N N 399 VAL HG13 H N N 400 VAL HG21 H N N 401 VAL HG22 H N N 402 VAL HG23 H N N 403 VAL HXT H N N 404 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 GOL C1 O1 sing N N 129 GOL C1 C2 sing N N 130 GOL C1 H11 sing N N 131 GOL C1 H12 sing N N 132 GOL O1 HO1 sing N N 133 GOL C2 O2 sing N N 134 GOL C2 C3 sing N N 135 GOL C2 H2 sing N N 136 GOL O2 HO2 sing N N 137 GOL C3 O3 sing N N 138 GOL C3 H31 sing N N 139 GOL C3 H32 sing N N 140 GOL O3 HO3 sing N N 141 HIS N CA sing N N 142 HIS N H sing N N 143 HIS N H2 sing N N 144 HIS CA C sing N N 145 HIS CA CB sing N N 146 HIS CA HA sing N N 147 HIS C O doub N N 148 HIS C OXT sing N N 149 HIS CB CG sing N N 150 HIS CB HB2 sing N N 151 HIS CB HB3 sing N N 152 HIS CG ND1 sing Y N 153 HIS CG CD2 doub Y N 154 HIS ND1 CE1 doub Y N 155 HIS ND1 HD1 sing N N 156 HIS CD2 NE2 sing Y N 157 HIS CD2 HD2 sing N N 158 HIS CE1 NE2 sing Y N 159 HIS CE1 HE1 sing N N 160 HIS NE2 HE2 sing N N 161 HIS OXT HXT sing N N 162 HOH O H1 sing N N 163 HOH O H2 sing N N 164 ILE N CA sing N N 165 ILE N H sing N N 166 ILE N H2 sing N N 167 ILE CA C sing N N 168 ILE CA CB sing N N 169 ILE CA HA sing N N 170 ILE C O doub N N 171 ILE C OXT sing N N 172 ILE CB CG1 sing N N 173 ILE CB CG2 sing N N 174 ILE CB HB sing N N 175 ILE CG1 CD1 sing N N 176 ILE CG1 HG12 sing N N 177 ILE CG1 HG13 sing N N 178 ILE CG2 HG21 sing N N 179 ILE CG2 HG22 sing N N 180 ILE CG2 HG23 sing N N 181 ILE CD1 HD11 sing N N 182 ILE CD1 HD12 sing N N 183 ILE CD1 HD13 sing N N 184 ILE OXT HXT sing N N 185 LEU N CA sing N N 186 LEU N H sing N N 187 LEU N H2 sing N N 188 LEU CA C sing N N 189 LEU CA CB sing N N 190 LEU CA HA sing N N 191 LEU C O doub N N 192 LEU C OXT sing N N 193 LEU CB CG sing N N 194 LEU CB HB2 sing N N 195 LEU CB HB3 sing N N 196 LEU CG CD1 sing N N 197 LEU CG CD2 sing N N 198 LEU CG HG sing N N 199 LEU CD1 HD11 sing N N 200 LEU CD1 HD12 sing N N 201 LEU CD1 HD13 sing N N 202 LEU CD2 HD21 sing N N 203 LEU CD2 HD22 sing N N 204 LEU CD2 HD23 sing N N 205 LEU OXT HXT sing N N 206 LYS N CA sing N N 207 LYS N H sing N N 208 LYS N H2 sing N N 209 LYS CA C sing N N 210 LYS CA CB sing N N 211 LYS CA HA sing N N 212 LYS C O doub N N 213 LYS C OXT sing N N 214 LYS CB CG sing N N 215 LYS CB HB2 sing N N 216 LYS CB HB3 sing N N 217 LYS CG CD sing N N 218 LYS CG HG2 sing N N 219 LYS CG HG3 sing N N 220 LYS CD CE sing N N 221 LYS CD HD2 sing N N 222 LYS CD HD3 sing N N 223 LYS CE NZ sing N N 224 LYS CE HE2 sing N N 225 LYS CE HE3 sing N N 226 LYS NZ HZ1 sing N N 227 LYS NZ HZ2 sing N N 228 LYS NZ HZ3 sing N N 229 LYS OXT HXT sing N N 230 MET N CA sing N N 231 MET N H sing N N 232 MET N H2 sing N N 233 MET CA C sing N N 234 MET CA CB sing N N 235 MET CA HA sing N N 236 MET C O doub N N 237 MET C OXT sing N N 238 MET CB CG sing N N 239 MET CB HB2 sing N N 240 MET CB HB3 sing N N 241 MET CG SD sing N N 242 MET CG HG2 sing N N 243 MET CG HG3 sing N N 244 MET SD CE sing N N 245 MET CE HE1 sing N N 246 MET CE HE2 sing N N 247 MET CE HE3 sing N N 248 MET OXT HXT sing N N 249 PHE N CA sing N N 250 PHE N H sing N N 251 PHE N H2 sing N N 252 PHE CA C sing N N 253 PHE CA CB sing N N 254 PHE CA HA sing N N 255 PHE C O doub N N 256 PHE C OXT sing N N 257 PHE CB CG sing N N 258 PHE CB HB2 sing N N 259 PHE CB HB3 sing N N 260 PHE CG CD1 doub Y N 261 PHE CG CD2 sing Y N 262 PHE CD1 CE1 sing Y N 263 PHE CD1 HD1 sing N N 264 PHE CD2 CE2 doub Y N 265 PHE CD2 HD2 sing N N 266 PHE CE1 CZ doub Y N 267 PHE CE1 HE1 sing N N 268 PHE CE2 CZ sing Y N 269 PHE CE2 HE2 sing N N 270 PHE CZ HZ sing N N 271 PHE OXT HXT sing N N 272 PRO N CA sing N N 273 PRO N CD sing N N 274 PRO N H sing N N 275 PRO CA C sing N N 276 PRO CA CB sing N N 277 PRO CA HA sing N N 278 PRO C O doub N N 279 PRO C OXT sing N N 280 PRO CB CG sing N N 281 PRO CB HB2 sing N N 282 PRO CB HB3 sing N N 283 PRO CG CD sing N N 284 PRO CG HG2 sing N N 285 PRO CG HG3 sing N N 286 PRO CD HD2 sing N N 287 PRO CD HD3 sing N N 288 PRO OXT HXT sing N N 289 SER N CA sing N N 290 SER N H sing N N 291 SER N H2 sing N N 292 SER CA C sing N N 293 SER CA CB sing N N 294 SER CA HA sing N N 295 SER C O doub N N 296 SER C OXT sing N N 297 SER CB OG sing N N 298 SER CB HB2 sing N N 299 SER CB HB3 sing N N 300 SER OG HG sing N N 301 SER OXT HXT sing N N 302 THR N CA sing N N 303 THR N H sing N N 304 THR N H2 sing N N 305 THR CA C sing N N 306 THR CA CB sing N N 307 THR CA HA sing N N 308 THR C O doub N N 309 THR C OXT sing N N 310 THR CB OG1 sing N N 311 THR CB CG2 sing N N 312 THR CB HB sing N N 313 THR OG1 HG1 sing N N 314 THR CG2 HG21 sing N N 315 THR CG2 HG22 sing N N 316 THR CG2 HG23 sing N N 317 THR OXT HXT sing N N 318 TRP N CA sing N N 319 TRP N H sing N N 320 TRP N H2 sing N N 321 TRP CA C sing N N 322 TRP CA CB sing N N 323 TRP CA HA sing N N 324 TRP C O doub N N 325 TRP C OXT sing N N 326 TRP CB CG sing N N 327 TRP CB HB2 sing N N 328 TRP CB HB3 sing N N 329 TRP CG CD1 doub Y N 330 TRP CG CD2 sing Y N 331 TRP CD1 NE1 sing Y N 332 TRP CD1 HD1 sing N N 333 TRP CD2 CE2 doub Y N 334 TRP CD2 CE3 sing Y N 335 TRP NE1 CE2 sing Y N 336 TRP NE1 HE1 sing N N 337 TRP CE2 CZ2 sing Y N 338 TRP CE3 CZ3 doub Y N 339 TRP CE3 HE3 sing N N 340 TRP CZ2 CH2 doub Y N 341 TRP CZ2 HZ2 sing N N 342 TRP CZ3 CH2 sing Y N 343 TRP CZ3 HZ3 sing N N 344 TRP CH2 HH2 sing N N 345 TRP OXT HXT sing N N 346 TYR N CA sing N N 347 TYR N H sing N N 348 TYR N H2 sing N N 349 TYR CA C sing N N 350 TYR CA CB sing N N 351 TYR CA HA sing N N 352 TYR C O doub N N 353 TYR C OXT sing N N 354 TYR CB CG sing N N 355 TYR CB HB2 sing N N 356 TYR CB HB3 sing N N 357 TYR CG CD1 doub Y N 358 TYR CG CD2 sing Y N 359 TYR CD1 CE1 sing Y N 360 TYR CD1 HD1 sing N N 361 TYR CD2 CE2 doub Y N 362 TYR CD2 HD2 sing N N 363 TYR CE1 CZ doub Y N 364 TYR CE1 HE1 sing N N 365 TYR CE2 CZ sing Y N 366 TYR CE2 HE2 sing N N 367 TYR CZ OH sing N N 368 TYR OH HH sing N N 369 TYR OXT HXT sing N N 370 VAL N CA sing N N 371 VAL N H sing N N 372 VAL N H2 sing N N 373 VAL CA C sing N N 374 VAL CA CB sing N N 375 VAL CA HA sing N N 376 VAL C O doub N N 377 VAL C OXT sing N N 378 VAL CB CG1 sing N N 379 VAL CB CG2 sing N N 380 VAL CB HB sing N N 381 VAL CG1 HG11 sing N N 382 VAL CG1 HG12 sing N N 383 VAL CG1 HG13 sing N N 384 VAL CG2 HG21 sing N N 385 VAL CG2 HG22 sing N N 386 VAL CG2 HG23 sing N N 387 VAL OXT HXT sing N N 388 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 GLYCEROL GOL 3 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 3KLR _pdbx_initial_refinement_model.details ? #