HEADER LIGASE 01-JUL-13 3WE5 TITLE CRYSTAL STRUCTURE OF UBIQUITIN CONJUGATING ENZYME E2 UBCA1 FROM TITLE 2 AGROCYBE AEGERITA COMPND MOL_ID: 1; COMPND 2 MOLECULE: UBIQUITIN CONJUGATING ENZYME; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: E2 UBCA1; COMPND 5 EC: 6.3.2.19; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: AGROCYBE AEGERITA; SOURCE 3 ORGANISM_COMMON: BLACK POPLAR MUSHROOM; SOURCE 4 ORGANISM_TAXID: 5400; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21 (DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET-28A KEYWDS ALPHA, BETA, UBIQUITIN CONJUGATING ENZYME E2, UBIQUITIN BINDING, KEYWDS 2 LIGASE EXPDTA X-RAY DIFFRACTION AUTHOR D.F.LI,L.FENG,D.C.WANG,W.LIU REVDAT 2 08-NOV-23 3WE5 1 REMARK SEQADV REVDAT 1 09-JUL-14 3WE5 0 JRNL AUTH D.F.LI,L.FENG,D.C.WANG,W.LIU JRNL TITL CRYSTAL STRUCTURE OF UBIQUITIN CONJUGATING ENZYME E2 UBCA1 JRNL TITL 2 FROM AGROCYBE AEGERITA JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.7.3_928) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 34.64 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 93.7 REMARK 3 NUMBER OF REFLECTIONS : 37002 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.205 REMARK 3 R VALUE (WORKING SET) : 0.202 REMARK 3 FREE R VALUE : 0.235 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.010 REMARK 3 FREE R VALUE TEST SET COUNT : 3704 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 34.6478 - 5.0313 0.88 1277 146 0.2082 0.2270 REMARK 3 2 5.0313 - 3.9954 0.97 1363 159 0.1667 0.1882 REMARK 3 3 3.9954 - 3.4909 0.99 1373 132 0.1700 0.1901 REMARK 3 4 3.4909 - 3.1720 1.00 1399 153 0.1844 0.2361 REMARK 3 5 3.1720 - 2.9447 1.00 1363 168 0.2004 0.2327 REMARK 3 6 2.9447 - 2.7712 1.00 1380 158 0.2051 0.2265 REMARK 3 7 2.7712 - 2.6325 1.00 1354 166 0.2089 0.2485 REMARK 3 8 2.6325 - 2.5179 1.00 1363 142 0.1989 0.2421 REMARK 3 9 2.5179 - 2.4210 1.00 1329 166 0.2038 0.2477 REMARK 3 10 2.4210 - 2.3375 1.00 1398 144 0.2069 0.2565 REMARK 3 11 2.3375 - 2.2644 1.00 1371 148 0.2114 0.2226 REMARK 3 12 2.2644 - 2.1997 0.99 1318 169 0.2377 0.2978 REMARK 3 13 2.1997 - 2.1418 1.00 1388 131 0.2131 0.2375 REMARK 3 14 2.1418 - 2.0896 1.00 1354 153 0.2045 0.2335 REMARK 3 15 2.0896 - 2.0421 1.00 1323 162 0.2033 0.2289 REMARK 3 16 2.0421 - 1.9986 1.00 1388 131 0.2020 0.2578 REMARK 3 17 1.9986 - 1.9586 1.00 1405 135 0.2182 0.2446 REMARK 3 18 1.9586 - 1.9217 1.00 1324 128 0.2252 0.2297 REMARK 3 19 1.9217 - 1.8874 0.99 1363 183 0.2688 0.3008 REMARK 3 20 1.8874 - 1.8554 0.95 1275 140 0.2316 0.2837 REMARK 3 21 1.8554 - 1.8254 0.90 1195 137 0.2421 0.2621 REMARK 3 22 1.8254 - 1.7974 0.85 1184 124 0.2408 0.2539 REMARK 3 23 1.7974 - 1.7709 0.81 1057 122 0.2548 0.3040 REMARK 3 24 1.7709 - 1.7460 0.74 1018 124 0.2576 0.3043 REMARK 3 25 1.7460 - 1.7224 0.67 901 97 0.2810 0.3002 REMARK 3 26 1.7224 - 1.7000 0.62 835 86 0.2936 0.3259 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 0.90 REMARK 3 SHRINKAGE RADIUS : 0.60 REMARK 3 K_SOL : 0.38 REMARK 3 B_SOL : 51.32 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.210 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 24.000 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 22.50 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 3.08190 REMARK 3 B22 (A**2) : 0.24780 REMARK 3 B33 (A**2) : -3.32970 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -3.86860 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 2238 REMARK 3 ANGLE : 1.125 3040 REMARK 3 CHIRALITY : 0.077 338 REMARK 3 PLANARITY : 0.005 397 REMARK 3 DIHEDRAL : 14.708 822 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3WE5 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 09-JUL-13. REMARK 100 THE DEPOSITION ID IS D_1000096221. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 03-MAR-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PHOTON FACTORY REMARK 200 BEAMLINE : BL-5A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.000 REMARK 200 MONOCHROMATOR : SI 111 CHANNEL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 37008 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.700 REMARK 200 RESOLUTION RANGE LOW (A) : 47.450 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 94.1 REMARK 200 DATA REDUNDANCY : 3.400 REMARK 200 R MERGE (I) : 0.04400 REMARK 200 R SYM (I) : 0.04400 REMARK 200 FOR THE DATA SET : 9.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.79 REMARK 200 COMPLETENESS FOR SHELL (%) : 72.2 REMARK 200 DATA REDUNDANCY IN SHELL : 2.30 REMARK 200 R MERGE FOR SHELL (I) : 0.20400 REMARK 200 R SYM FOR SHELL (I) : 0.20400 REMARK 200 FOR SHELL : 3.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: 2FO3 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.30 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.33 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20% PEG 3350, 0.2M SODIUM ACETATE, PH REMARK 280 6.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 42.46500 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 17.38000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 42.46500 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 17.38000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 488 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -19 REMARK 465 GLY A -18 REMARK 465 SER A -17 REMARK 465 SER A -16 REMARK 465 HIS A -15 REMARK 465 HIS A -14 REMARK 465 HIS A -13 REMARK 465 HIS A -12 REMARK 465 HIS A -11 REMARK 465 HIS A -10 REMARK 465 SER A -9 REMARK 465 SER A -8 REMARK 465 GLY A -7 REMARK 465 LEU A -6 REMARK 465 VAL A -5 REMARK 465 PRO A -4 REMARK 465 ARG A -3 REMARK 465 GLY A -2 REMARK 465 SER A -1 REMARK 465 HIS A 0 REMARK 465 MET A 1 REMARK 465 LYS A 143 REMARK 465 THR A 144 REMARK 465 LEU A 145 REMARK 465 PHE A 146 REMARK 465 HIS A 147 REMARK 465 TYR A 148 REMARK 465 ASP A 149 REMARK 465 ASP A 150 REMARK 465 ASP A 151 REMARK 465 THR A 152 REMARK 465 VAL A 153 REMARK 465 MET B -19 REMARK 465 GLY B -18 REMARK 465 SER B -17 REMARK 465 SER B -16 REMARK 465 HIS B -15 REMARK 465 HIS B -14 REMARK 465 HIS B -13 REMARK 465 HIS B -12 REMARK 465 HIS B -11 REMARK 465 HIS B -10 REMARK 465 SER B -9 REMARK 465 SER B -8 REMARK 465 GLY B -7 REMARK 465 LEU B -6 REMARK 465 VAL B -5 REMARK 465 PRO B -4 REMARK 465 ARG B -3 REMARK 465 GLY B -2 REMARK 465 SER B -1 REMARK 465 HIS B 0 REMARK 465 MET B 1 REMARK 465 LYS B 143 REMARK 465 THR B 144 REMARK 465 LEU B 145 REMARK 465 PHE B 146 REMARK 465 HIS B 147 REMARK 465 TYR B 148 REMARK 465 ASP B 149 REMARK 465 ASP B 150 REMARK 465 ASP B 151 REMARK 465 THR B 152 REMARK 465 VAL B 153 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 505 O HOH A 512 1.85 REMARK 500 O HOH A 336 O HOH A 532 1.97 REMARK 500 NZ LYS B 78 O HOH B 235 1.97 REMARK 500 O HOH A 516 O HOH A 522 1.98 REMARK 500 O HOH A 395 O HOH A 429 1.98 REMARK 500 O HOH B 274 O HOH B 277 1.99 REMARK 500 NH2 ARG A 135 O HOH A 534 2.01 REMARK 500 O TRP B 101 O HOH B 239 2.02 REMARK 500 OE2 GLU B 125 O HOH B 276 2.02 REMARK 500 O HOH B 296 O HOH B 298 2.04 REMARK 500 NZ LYS A 35 O HOH A 491 2.05 REMARK 500 O HOH A 394 O HOH A 480 2.06 REMARK 500 O HOH A 454 O HOH A 475 2.06 REMARK 500 O GLY B 20 O HOH B 255 2.06 REMARK 500 O HOH A 382 O HOH B 213 2.06 REMARK 500 O HOH A 439 O HOH A 470 2.06 REMARK 500 O HOH A 388 O HOH A 532 2.07 REMARK 500 O HOH A 500 O HOH A 518 2.08 REMARK 500 O HOH A 474 O HOH A 537 2.09 REMARK 500 O HOH A 339 O HOH A 388 2.10 REMARK 500 O HOH A 339 O HOH A 532 2.12 REMARK 500 OD2 ASP A 139 O HOH A 453 2.13 REMARK 500 O HOH A 465 O HOH A 469 2.18 REMARK 500 O HOH B 251 O HOH B 303 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 484 O HOH A 486 4445 1.89 REMARK 500 O HOH A 446 O HOH A 459 2555 1.93 REMARK 500 NZ LYS B 11 O HOH B 288 4546 2.09 REMARK 500 O HOH A 431 O HOH A 434 4445 2.11 REMARK 500 O HOH A 360 O HOH B 303 1545 2.14 REMARK 500 O HOH A 484 O HOH A 512 4445 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 32 CB - CG - OD1 ANGL. DEV. = 5.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA B 61 0.46 -66.42 REMARK 500 LYS B 124 98.61 -56.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACY A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 202 DBREF 3WE5 A 1 152 UNP H9CTH3 H9CTH3_AGRAE 1 152 DBREF 3WE5 B 1 152 UNP H9CTH3 H9CTH3_AGRAE 1 152 SEQADV 3WE5 MET A -19 UNP H9CTH3 EXPRESSION TAG SEQADV 3WE5 GLY A -18 UNP H9CTH3 EXPRESSION TAG SEQADV 3WE5 SER A -17 UNP H9CTH3 EXPRESSION TAG SEQADV 3WE5 SER A -16 UNP H9CTH3 EXPRESSION TAG SEQADV 3WE5 HIS A -15 UNP H9CTH3 EXPRESSION TAG SEQADV 3WE5 HIS A -14 UNP H9CTH3 EXPRESSION TAG SEQADV 3WE5 HIS A -13 UNP H9CTH3 EXPRESSION TAG SEQADV 3WE5 HIS A -12 UNP H9CTH3 EXPRESSION TAG SEQADV 3WE5 HIS A -11 UNP H9CTH3 EXPRESSION TAG SEQADV 3WE5 HIS A -10 UNP H9CTH3 EXPRESSION TAG SEQADV 3WE5 SER A -9 UNP H9CTH3 EXPRESSION TAG SEQADV 3WE5 SER A -8 UNP H9CTH3 EXPRESSION TAG SEQADV 3WE5 GLY A -7 UNP H9CTH3 EXPRESSION TAG SEQADV 3WE5 LEU A -6 UNP H9CTH3 EXPRESSION TAG SEQADV 3WE5 VAL A -5 UNP H9CTH3 EXPRESSION TAG SEQADV 3WE5 PRO A -4 UNP H9CTH3 EXPRESSION TAG SEQADV 3WE5 ARG A -3 UNP H9CTH3 EXPRESSION TAG SEQADV 3WE5 GLY A -2 UNP H9CTH3 EXPRESSION TAG SEQADV 3WE5 SER A -1 UNP H9CTH3 EXPRESSION TAG SEQADV 3WE5 HIS A 0 UNP H9CTH3 EXPRESSION TAG SEQADV 3WE5 VAL A 153 UNP H9CTH3 EXPRESSION TAG SEQADV 3WE5 MET B -19 UNP H9CTH3 EXPRESSION TAG SEQADV 3WE5 GLY B -18 UNP H9CTH3 EXPRESSION TAG SEQADV 3WE5 SER B -17 UNP H9CTH3 EXPRESSION TAG SEQADV 3WE5 SER B -16 UNP H9CTH3 EXPRESSION TAG SEQADV 3WE5 HIS B -15 UNP H9CTH3 EXPRESSION TAG SEQADV 3WE5 HIS B -14 UNP H9CTH3 EXPRESSION TAG SEQADV 3WE5 HIS B -13 UNP H9CTH3 EXPRESSION TAG SEQADV 3WE5 HIS B -12 UNP H9CTH3 EXPRESSION TAG SEQADV 3WE5 HIS B -11 UNP H9CTH3 EXPRESSION TAG SEQADV 3WE5 HIS B -10 UNP H9CTH3 EXPRESSION TAG SEQADV 3WE5 SER B -9 UNP H9CTH3 EXPRESSION TAG SEQADV 3WE5 SER B -8 UNP H9CTH3 EXPRESSION TAG SEQADV 3WE5 GLY B -7 UNP H9CTH3 EXPRESSION TAG SEQADV 3WE5 LEU B -6 UNP H9CTH3 EXPRESSION TAG SEQADV 3WE5 VAL B -5 UNP H9CTH3 EXPRESSION TAG SEQADV 3WE5 PRO B -4 UNP H9CTH3 EXPRESSION TAG SEQADV 3WE5 ARG B -3 UNP H9CTH3 EXPRESSION TAG SEQADV 3WE5 GLY B -2 UNP H9CTH3 EXPRESSION TAG SEQADV 3WE5 SER B -1 UNP H9CTH3 EXPRESSION TAG SEQADV 3WE5 HIS B 0 UNP H9CTH3 EXPRESSION TAG SEQADV 3WE5 VAL B 153 UNP H9CTH3 EXPRESSION TAG SEQRES 1 A 173 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 173 LEU VAL PRO ARG GLY SER HIS MET GLY SER VAL SER ALA SEQRES 3 A 173 ARG ARG LEU ALA LYS GLU LEU ARG GLU ILE GLN SER GLU SEQRES 4 A 173 GLY CYS PRO VAL GLY ILE THR LEU VAL ASP ALA SER ASP SEQRES 5 A 173 PHE SER LYS TRP LEU PHE THR ILE GLU VAL MET GLY ASN SEQRES 6 A 173 SER GLN TYR GLN GLY GLU ALA TYR THR LEU GLN PHE ARG SEQRES 7 A 173 PHE ASP ALA GLN TYR PRO ILE SER SER PRO ALA VAL GLN SEQRES 8 A 173 PHE VAL VAL THR ASP GLY LYS GLU ALA PRO VAL HIS PRO SEQRES 9 A 173 HIS VAL TYR SER ASN GLY HIS ILE CYS ALA SER ILE LEU SEQRES 10 A 173 GLY SER GLU TRP SER PRO VAL LEU SER VAL ILE ALA VAL SEQRES 11 A 173 CYS VAL THR LEU GLN SER MET LEU ALA SER CYS LYS LYS SEQRES 12 A 173 LYS GLU ARG PRO ALA ASP ASN ASP ARG TYR VAL ARG THR SEQRES 13 A 173 ALA PRO ASP ASN PRO LYS LYS THR LEU PHE HIS TYR ASP SEQRES 14 A 173 ASP ASP THR VAL SEQRES 1 B 173 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 B 173 LEU VAL PRO ARG GLY SER HIS MET GLY SER VAL SER ALA SEQRES 3 B 173 ARG ARG LEU ALA LYS GLU LEU ARG GLU ILE GLN SER GLU SEQRES 4 B 173 GLY CYS PRO VAL GLY ILE THR LEU VAL ASP ALA SER ASP SEQRES 5 B 173 PHE SER LYS TRP LEU PHE THR ILE GLU VAL MET GLY ASN SEQRES 6 B 173 SER GLN TYR GLN GLY GLU ALA TYR THR LEU GLN PHE ARG SEQRES 7 B 173 PHE ASP ALA GLN TYR PRO ILE SER SER PRO ALA VAL GLN SEQRES 8 B 173 PHE VAL VAL THR ASP GLY LYS GLU ALA PRO VAL HIS PRO SEQRES 9 B 173 HIS VAL TYR SER ASN GLY HIS ILE CYS ALA SER ILE LEU SEQRES 10 B 173 GLY SER GLU TRP SER PRO VAL LEU SER VAL ILE ALA VAL SEQRES 11 B 173 CYS VAL THR LEU GLN SER MET LEU ALA SER CYS LYS LYS SEQRES 12 B 173 LYS GLU ARG PRO ALA ASP ASN ASP ARG TYR VAL ARG THR SEQRES 13 B 173 ALA PRO ASP ASN PRO LYS LYS THR LEU PHE HIS TYR ASP SEQRES 14 B 173 ASP ASP THR VAL HET ACY A 201 4 HET GOL A 202 6 HETNAM ACY ACETIC ACID HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 ACY C2 H4 O2 FORMUL 4 GOL C3 H8 O3 FORMUL 5 HOH *343(H2 O) HELIX 1 1 SER A 3 GLY A 20 1 18 HELIX 2 2 ALA A 94 GLY A 98 5 5 HELIX 3 3 SER A 106 CYS A 121 1 16 HELIX 4 4 ASP A 129 ALA A 137 1 9 HELIX 5 5 SER B 3 GLY B 20 1 18 HELIX 6 6 ALA B 94 GLY B 98 5 5 HELIX 7 7 SER B 106 SER B 120 1 15 HELIX 8 8 ASP B 129 ALA B 137 1 9 SHEET 1 A 4 ILE A 25 ASP A 29 0 SHEET 2 A 4 LYS A 35 GLU A 41 -1 O THR A 39 N THR A 26 SHEET 3 A 4 ALA A 52 ARG A 58 -1 O LEU A 55 N PHE A 38 SHEET 4 A 4 ALA A 69 PHE A 72 -1 O GLN A 71 N GLN A 56 SHEET 1 B 4 ILE B 25 ASP B 29 0 SHEET 2 B 4 LYS B 35 ILE B 40 -1 O LEU B 37 N VAL B 28 SHEET 3 B 4 TYR B 53 ARG B 58 -1 O PHE B 57 N TRP B 36 SHEET 4 B 4 ALA B 69 PHE B 72 -1 O GLN B 71 N GLN B 56 CISPEP 1 TYR A 63 PRO A 64 0 7.57 CISPEP 2 TYR B 63 PRO B 64 0 8.43 SITE 1 AC1 5 GLY A 20 CYS A 21 PRO A 22 VAL A 23 SITE 2 AC1 5 HOH A 306 SITE 1 AC2 6 LEU A 13 GLN A 17 ALA A 61 HOH A 384 SITE 2 AC2 6 HOH A 475 HOH A 492 CRYST1 84.930 34.760 128.100 90.00 108.88 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011774 0.000000 0.004027 0.00000 SCALE2 0.000000 0.028769 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008250 0.00000