HEADER TRANSFERASE/TRANSFERASE INHIBITOR 17-JUL-13 3WF7 TITLE CRYSTAL STRUCTURE OF S6K1 KINASE DOMAIN IN COMPLEX WITH A PURINE TITLE 2 DERIVATIVE 1-(9H-PURIN-6-YL)-N-[3-(TRIFLUOROMETHYL)PHENYL]PIPERIDINE- TITLE 3 4-CARBOXAMIDE COMPND MOL_ID: 1; COMPND 2 MOLECULE: RIBOSOMAL PROTEIN S6 KINASE BETA-1; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 78-399; COMPND 5 SYNONYM: S6K-BETA-1, S6K1, 70 KDA RIBOSOMAL PROTEIN S6 KINASE 1, COMPND 6 RIBOSOMAL PROTEIN S6 KINASE I, SERINE/THREONINE-PROTEIN KINASE 14A, COMPND 7 P70 RIBOSOMAL S6 KINASE ALPHA; COMPND 8 EC: 2.7.11.1; COMPND 9 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: RPS6KB1; SOURCE 6 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 7 EXPRESSION_SYSTEM_COMMON: FALL ARMYWORM; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 7108; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: BACULOVIRUS KEYWDS SERINE/THREONINE PROTEIN KINASE DOMAIN, TRANSFERASE, PHOSPHORYLATION, KEYWDS 2 ATP-BINDING, ZINC-BINDING, TRANSFERASE-TRANSFERASE INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR H.NIWA,M.SHIROUZU,S.YOKOYAMA REVDAT 3 29-OCT-14 3WF7 1 JRNL REVDAT 2 13-AUG-14 3WF7 1 JRNL REVDAT 1 06-AUG-14 3WF7 0 JRNL AUTH H.NIWA,J.MIKUNI,S.SASAKI,Y.TOMABECHI,K.HONDA,M.IKEDA, JRNL AUTH 2 N.OHSAWA,M.WAKIYAMA,N.HANDA,M.SHIROUZU,T.HONMA,A.TANAKA, JRNL AUTH 3 S.YOKOYAMA JRNL TITL CRYSTAL STRUCTURES OF THE S6K1 KINASE DOMAIN IN COMPLEXES JRNL TITL 2 WITH INHIBITORS JRNL REF J.STRUCT.FUNCT.GENOM. V. 15 153 2014 JRNL REFN ISSN 1345-711X JRNL PMID 25078151 JRNL DOI 10.1007/S10969-014-9188-8 REMARK 2 REMARK 2 RESOLUTION. 1.85 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.9_1690) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE- REMARK 3 : KUNSTLEVE,LI-WEI HUNG,ROBERT IMMORMINO, REMARK 3 : TOM IOERGER,AIRLIE MCCOY,ERIK MCKEE,NIGEL REMARK 3 : MORIARTY,REETAL PAI,RANDY READ,JANE REMARK 3 : RICHARDSON,DAVID RICHARDSON,TOD ROMO,JIM REMARK 3 : SACCHETTINI,NICHOLAS SAUTER,JACOB SMITH, REMARK 3 : LAURENT STORONI,TOM TERWILLIGER,PETER REMARK 3 : ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.85 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 49.10 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.170 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 31266 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.175 REMARK 3 R VALUE (WORKING SET) : 0.173 REMARK 3 FREE R VALUE : 0.224 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.020 REMARK 3 FREE R VALUE TEST SET COUNT : 2919 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 49.1174 - 5.1014 1.00 2666 113 0.1823 0.2458 REMARK 3 2 5.1014 - 4.0497 1.00 2614 139 0.1388 0.1775 REMARK 3 3 4.0497 - 3.5380 1.00 2652 125 0.1339 0.2002 REMARK 3 4 3.5380 - 3.2146 1.00 2631 129 0.1686 0.2266 REMARK 3 5 3.2146 - 2.9842 1.00 2629 127 0.1873 0.2834 REMARK 3 6 2.9842 - 2.8083 1.00 2617 163 0.1836 0.2318 REMARK 3 7 2.8083 - 2.6676 1.00 2618 141 0.1740 0.1936 REMARK 3 8 2.6676 - 2.5515 1.00 2635 148 0.1770 0.2468 REMARK 3 9 2.5515 - 2.4533 1.00 2614 142 0.1776 0.2294 REMARK 3 10 2.4533 - 2.3686 1.00 2608 167 0.1685 0.2038 REMARK 3 11 2.3686 - 2.2946 1.00 2639 129 0.1710 0.2146 REMARK 3 12 2.2946 - 2.2290 1.00 2585 164 0.1766 0.2275 REMARK 3 13 2.2290 - 2.1703 1.00 2622 122 0.1817 0.2235 REMARK 3 14 2.1703 - 2.1174 1.00 2662 131 0.1812 0.2247 REMARK 3 15 2.1174 - 2.0692 1.00 2594 165 0.1964 0.2207 REMARK 3 16 2.0692 - 2.0252 1.00 2685 104 0.2057 0.2504 REMARK 3 17 2.0252 - 1.9847 1.00 2600 138 0.2193 0.2322 REMARK 3 18 1.9847 - 1.9472 1.00 2662 148 0.2347 0.3101 REMARK 3 19 1.9472 - 1.9124 1.00 2590 147 0.2450 0.2796 REMARK 3 20 1.9124 - 1.8800 1.00 2615 148 0.2727 0.2731 REMARK 3 21 1.8800 - 1.8497 1.00 2637 129 0.3004 0.3287 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.220 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 21.120 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 43.35 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 2399 REMARK 3 ANGLE : 0.967 3235 REMARK 3 CHIRALITY : 0.041 346 REMARK 3 PLANARITY : 0.005 408 REMARK 3 DIHEDRAL : 16.948 919 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN A AND (RESSEQ 83:179 ) REMARK 3 ORIGIN FOR THE GROUP (A): 4.3748 -5.9565 9.7449 REMARK 3 T TENSOR REMARK 3 T11: 0.3285 T22: 0.3394 REMARK 3 T33: 0.2431 T12: 0.0214 REMARK 3 T13: 0.0078 T23: 0.0306 REMARK 3 L TENSOR REMARK 3 L11: 2.1770 L22: 3.9794 REMARK 3 L33: 3.8326 L12: -0.3909 REMARK 3 L13: 0.6427 L23: 1.0694 REMARK 3 S TENSOR REMARK 3 S11: 0.0649 S12: 0.5751 S13: 0.2762 REMARK 3 S21: -0.6938 S22: -0.1207 S23: 0.0304 REMARK 3 S31: -0.6867 S32: 0.0443 S33: 0.0508 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN A AND (RESSEQ 180:374 ) REMARK 3 ORIGIN FOR THE GROUP (A): 15.0202 -27.8692 3.2354 REMARK 3 T TENSOR REMARK 3 T11: 0.2150 T22: 0.1529 REMARK 3 T33: 0.2012 T12: -0.0199 REMARK 3 T13: -0.0327 T23: -0.0498 REMARK 3 L TENSOR REMARK 3 L11: 2.6341 L22: 2.1900 REMARK 3 L33: 5.1860 L12: -1.0057 REMARK 3 L13: -1.1170 L23: 0.9753 REMARK 3 S TENSOR REMARK 3 S11: 0.0051 S12: -0.0685 S13: 0.1817 REMARK 3 S21: -0.0314 S22: -0.0215 S23: -0.0173 REMARK 3 S31: -0.0145 S32: 0.1515 S33: 0.0462 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3WF7 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 31-JUL-13. REMARK 100 THE RCSB ID CODE IS RCSB096259. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 16-MAR-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : AUSTRALIAN SYNCHROTRON REMARK 200 BEAMLINE : MX2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.95369 REMARK 200 MONOCHROMATOR : SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 31350 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.850 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 9.600 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.08000 REMARK 200 FOR THE DATA SET : 26.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.85 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.88 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 9.70 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.91 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.36 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M TRIS-HCL, 3.7-3.9M SODIUM REMARK 280 FORMATE, PH 8.5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 72.82450 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 34.71900 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 34.71900 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 36.41225 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 34.71900 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 34.71900 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 109.23675 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 34.71900 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 34.71900 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 36.41225 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 34.71900 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 34.71900 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 109.23675 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 72.82450 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 71 REMARK 465 SER A 72 REMARK 465 PHE A 73 REMARK 465 THR A 74 REMARK 465 SER A 75 REMARK 465 SER A 76 REMARK 465 GLY A 77 REMARK 465 SER A 78 REMARK 465 VAL A 79 REMARK 465 ASN A 80 REMARK 465 ARG A 81 REMARK 465 GLY A 82 REMARK 465 GLY A 247 REMARK 465 THR A 248 REMARK 465 VAL A 249 REMARK 465 SER A 375 REMARK 465 GLU A 376 REMARK 465 GLU A 377 REMARK 465 ASP A 378 REMARK 465 VAL A 379 REMARK 465 SER A 380 REMARK 465 GLN A 381 REMARK 465 PHE A 382 REMARK 465 ASP A 383 REMARK 465 SER A 384 REMARK 465 LYS A 385 REMARK 465 PHE A 386 REMARK 465 THR A 387 REMARK 465 ARG A 388 REMARK 465 GLN A 389 REMARK 465 THR A 390 REMARK 465 PRO A 391 REMARK 465 VAL A 392 REMARK 465 ASP A 393 REMARK 465 SER A 394 REMARK 465 PRO A 395 REMARK 465 ASP A 396 REMARK 465 ASP A 397 REMARK 465 SER A 398 REMARK 465 THR A 399 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 132 NE CZ NH1 NH2 REMARK 470 LYS A 135 CG CD CE NZ REMARK 470 ILE A 244 CG1 CG2 CD1 REMARK 470 LYS A 364 CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 724 O HOH A 726 2.02 REMARK 500 O HOH A 659 O HOH A 667 2.10 REMARK 500 O2 GOL A 403 O HOH A 539 2.14 REMARK 500 OG1 THR A 250 O3P TPO A 252 2.15 REMARK 500 O HOH A 636 O HOH A 685 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 115 38.03 -92.68 REMARK 500 ARG A 132 -74.98 -63.45 REMARK 500 LYS A 135 -50.26 -123.08 REMARK 500 ASP A 136 97.85 -163.41 REMARK 500 ARG A 217 -48.65 77.10 REMARK 500 LEU A 219 30.71 -98.25 REMARK 500 HIS A 245 -149.73 -81.36 REMARK 500 ASN A 331 98.81 -69.92 REMARK 500 ASP A 342 -120.28 46.88 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 401 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 251 ND1 REMARK 620 2 HIS A 245 ND1 112.2 REMARK 620 3 CYS A 240 SG 108.0 118.8 REMARK 620 4 CYS A 254 SG 107.8 97.4 111.9 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FS9 A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 403 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3WE4 RELATED DB: PDB REMARK 900 RELATED ID: 3WF5 RELATED DB: PDB REMARK 900 RELATED ID: 3WF6 RELATED DB: PDB REMARK 900 RELATED ID: 3WF8 RELATED DB: PDB REMARK 900 RELATED ID: 3WF9 RELATED DB: PDB DBREF 3WF7 A 78 399 UNP P23443 KS6B1_HUMAN 78 399 SEQADV 3WF7 GLY A 71 UNP P23443 EXPRESSION TAG SEQADV 3WF7 SER A 72 UNP P23443 EXPRESSION TAG SEQADV 3WF7 PHE A 73 UNP P23443 EXPRESSION TAG SEQADV 3WF7 THR A 74 UNP P23443 EXPRESSION TAG SEQADV 3WF7 SER A 75 UNP P23443 EXPRESSION TAG SEQADV 3WF7 SER A 76 UNP P23443 EXPRESSION TAG SEQADV 3WF7 GLY A 77 UNP P23443 EXPRESSION TAG SEQRES 1 A 329 GLY SER PHE THR SER SER GLY SER VAL ASN ARG GLY PRO SEQRES 2 A 329 GLU LYS ILE ARG PRO GLU CYS PHE GLU LEU LEU ARG VAL SEQRES 3 A 329 LEU GLY LYS GLY GLY TYR GLY LYS VAL PHE GLN VAL ARG SEQRES 4 A 329 LYS VAL THR GLY ALA ASN THR GLY LYS ILE PHE ALA MET SEQRES 5 A 329 LYS VAL LEU LYS LYS ALA MET ILE VAL ARG ASN ALA LYS SEQRES 6 A 329 ASP THR ALA HIS THR LYS ALA GLU ARG ASN ILE LEU GLU SEQRES 7 A 329 GLU VAL LYS HIS PRO PHE ILE VAL ASP LEU ILE TYR ALA SEQRES 8 A 329 PHE GLN THR GLY GLY LYS LEU TYR LEU ILE LEU GLU TYR SEQRES 9 A 329 LEU SER GLY GLY GLU LEU PHE MET GLN LEU GLU ARG GLU SEQRES 10 A 329 GLY ILE PHE MET GLU ASP THR ALA CYS PHE TYR LEU ALA SEQRES 11 A 329 GLU ILE SER MET ALA LEU GLY HIS LEU HIS GLN LYS GLY SEQRES 12 A 329 ILE ILE TYR ARG ASP LEU LYS PRO GLU ASN ILE MET LEU SEQRES 13 A 329 ASN HIS GLN GLY HIS VAL LYS LEU THR ASP PHE GLY LEU SEQRES 14 A 329 CYS LYS GLU SER ILE HIS ASP GLY THR VAL THR HIS TPO SEQRES 15 A 329 PHE CYS GLY THR ILE GLU TYR MET ALA PRO GLU ILE LEU SEQRES 16 A 329 MET ARG SER GLY HIS ASN ARG ALA VAL ASP TRP TRP SER SEQRES 17 A 329 LEU GLY ALA LEU MET TYR ASP MET LEU THR GLY ALA PRO SEQRES 18 A 329 PRO PHE THR GLY GLU ASN ARG LYS LYS THR ILE ASP LYS SEQRES 19 A 329 ILE LEU LYS CYS LYS LEU ASN LEU PRO PRO TYR LEU THR SEQRES 20 A 329 GLN GLU ALA ARG ASP LEU LEU LYS LYS LEU LEU LYS ARG SEQRES 21 A 329 ASN ALA ALA SER ARG LEU GLY ALA GLY PRO GLY ASP ALA SEQRES 22 A 329 GLY GLU VAL GLN ALA HIS PRO PHE PHE ARG HIS ILE ASN SEQRES 23 A 329 TRP GLU GLU LEU LEU ALA ARG LYS VAL GLU PRO PRO PHE SEQRES 24 A 329 LYS PRO LEU LEU GLN SER GLU GLU ASP VAL SER GLN PHE SEQRES 25 A 329 ASP SER LYS PHE THR ARG GLN THR PRO VAL ASP SER PRO SEQRES 26 A 329 ASP ASP SER THR MODRES 3WF7 TPO A 252 THR PHOSPHOTHREONINE HET TPO A 252 11 HET ZN A 401 1 HET FS9 A 402 28 HET GOL A 403 6 HETNAM TPO PHOSPHOTHREONINE HETNAM ZN ZINC ION HETNAM FS9 1-(9H-PURIN-6-YL)-N-[3-(TRIFLUOROMETHYL) HETNAM 2 FS9 PHENYL]PIPERIDINE-4-CARBOXAMIDE HETNAM GOL GLYCEROL HETSYN TPO PHOSPHONOTHREONINE HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 1 TPO C4 H10 N O6 P FORMUL 2 ZN ZN 2+ FORMUL 3 FS9 C18 H17 F3 N6 O FORMUL 4 GOL C3 H8 O3 FORMUL 5 HOH *226(H2 O) HELIX 1 1 ARG A 87 GLU A 89 5 3 HELIX 2 2 LYS A 127 ASN A 133 1 7 HELIX 3 3 ASP A 136 VAL A 150 1 15 HELIX 4 4 GLU A 179 GLY A 188 1 10 HELIX 5 5 MET A 191 GLY A 213 1 23 HELIX 6 6 LYS A 220 GLU A 222 5 3 HELIX 7 7 ALA A 261 MET A 266 1 6 HELIX 8 8 ARG A 272 GLY A 289 1 18 HELIX 9 9 ASN A 297 CYS A 308 1 12 HELIX 10 10 THR A 317 LEU A 328 1 12 HELIX 11 11 ASN A 331 ARG A 335 5 5 HELIX 12 12 ASP A 342 ALA A 348 1 7 HELIX 13 13 HIS A 349 ARG A 353 5 5 HELIX 14 14 ASN A 356 ALA A 362 1 7 SHEET 1 A 5 PHE A 91 LYS A 99 0 SHEET 2 A 5 GLY A 103 LYS A 110 -1 O VAL A 105 N LEU A 97 SHEET 3 A 5 ILE A 119 LYS A 126 -1 O MET A 122 N PHE A 106 SHEET 4 A 5 LYS A 167 GLU A 173 -1 O LEU A 172 N ALA A 121 SHEET 5 A 5 LEU A 158 THR A 164 -1 N PHE A 162 O TYR A 169 SHEET 1 B 2 ILE A 224 LEU A 226 0 SHEET 2 B 2 VAL A 232 LEU A 234 -1 O LYS A 233 N MET A 225 LINK C HIS A 251 N TPO A 252 1555 1555 1.33 LINK C TPO A 252 N PHE A 253 1555 1555 1.33 LINK ND1 HIS A 251 ZN ZN A 401 1555 1555 2.23 LINK ND1 HIS A 245 ZN ZN A 401 1555 1555 2.32 LINK SG CYS A 240 ZN ZN A 401 1555 1555 2.49 LINK SG CYS A 254 ZN ZN A 401 1555 1555 2.52 SITE 1 AC1 4 CYS A 240 HIS A 245 HIS A 251 CYS A 254 SITE 1 AC2 18 LYS A 99 GLY A 100 TYR A 102 GLY A 103 SITE 2 AC2 18 LYS A 104 VAL A 105 ALA A 121 LYS A 123 SITE 3 AC2 18 LEU A 125 VAL A 156 GLU A 173 TYR A 174 SITE 4 AC2 18 LEU A 175 MET A 225 LYS A 241 HOH A 560 SITE 5 AC2 18 HOH A 563 HOH A 696 SITE 1 AC3 8 TYR A 174 SER A 176 LYS A 329 ASN A 331 SITE 2 AC3 8 SER A 334 HOH A 539 HOH A 595 HOH A 600 CRYST1 69.438 69.438 145.649 90.00 90.00 90.00 P 41 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014401 0.000000 0.000000 0.00000 SCALE2 0.000000 0.014401 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006866 0.00000