HEADER IMMUNE SYSTEM/OXIDOREDUCTASE 18-JUL-13 3WFD TITLE REDUCED AND ACETALDOXIME-BOUND CYTOCHROME C-DEPENDENT NITRIC OXIDE TITLE 2 REDUCTASE (CNOR) FROM PSEUDOMONAS AERUGINOSA IN COMPLEX WITH ANTIBODY TITLE 3 FRAGMENT COMPND MOL_ID: 1; COMPND 2 MOLECULE: ANTIBODY FAB FRAGMENT LIGHT CHAIN; COMPND 3 CHAIN: L; COMPND 4 MOL_ID: 2; COMPND 5 MOLECULE: ANTIBODY FAB FRAGMENT HEAVY CHAIN; COMPND 6 CHAIN: H; COMPND 7 MOL_ID: 3; COMPND 8 MOLECULE: NITRIC OXIDE REDUCTASE SUBUNIT B; COMPND 9 CHAIN: B; COMPND 10 SYNONYM: NOR LARGE SUBUNIT, NITRIC OXIDE REDUCTASE CYTOCHROME B COMPND 11 SUBUNIT; COMPND 12 EC: 1.7.2.5; COMPND 13 MOL_ID: 4; COMPND 14 MOLECULE: NITRIC OXIDE REDUCTASE SUBUNIT C; COMPND 15 CHAIN: C; COMPND 16 SYNONYM: NOR SMALL SUBUNIT, NITRIC OXIDE REDUCTASE CYTOCHROME C COMPND 17 SUBUNIT SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_TAXID: 10090; SOURCE 4 MOL_ID: 2; SOURCE 5 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 6 ORGANISM_TAXID: 10090; SOURCE 7 MOL_ID: 3; SOURCE 8 ORGANISM_SCIENTIFIC: PSEUDOMONAS AERUGINOSA; SOURCE 9 ORGANISM_TAXID: 208964; SOURCE 10 STRAIN: PAO1; SOURCE 11 MOL_ID: 4; SOURCE 12 ORGANISM_SCIENTIFIC: PSEUDOMONAS AERUGINOSA; SOURCE 13 ORGANISM_TAXID: 208964; SOURCE 14 STRAIN: PAO1 KEYWDS METAL-BINDING, MEMBRANE PROTEIN, IMMUNE SYSTEM-OXIDOREDUCTASE COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR N.SATO,S.ISHII,T.HINO,H.SUGIMOTO,Y.FUKUMORI,Y.SHIRO,T.TOSHA REVDAT 5 16-OCT-24 3WFD 1 REMARK REVDAT 4 08-NOV-23 3WFD 1 REMARK REVDAT 3 24-AUG-22 3WFD 1 JRNL REMARK SEQADV LINK REVDAT 2 22-NOV-17 3WFD 1 REMARK REVDAT 1 28-MAY-14 3WFD 0 JRNL AUTH N.SATO,S.ISHII,H.SUGIMOTO,T.HINO,Y.FUKUMORI,Y.SAKO,Y.SHIRO, JRNL AUTH 2 T.TOSHA JRNL TITL STRUCTURES OF REDUCED AND LIGAND-BOUND NITRIC OXIDE JRNL TITL 2 REDUCTASE PROVIDE INSIGHTS INTO FUNCTIONAL DIFFERENCES IN JRNL TITL 3 RESPIRATORY ENZYMES. JRNL REF PROTEINS V. 82 1258 2014 JRNL REFN ESSN 1097-0134 JRNL PMID 24338896 JRNL DOI 10.1002/PROT.24492 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH T.HINO,Y.MATSUMOTO,S.NAGANO,H.SUGIMOTO,Y.FUKUMORI,T.MURATA, REMARK 1 AUTH 2 S.IWATA,Y.SHIRO REMARK 1 TITL STRUCTURAL BASIS OF BIOLOGICAL N2O GENERATION BY BACTERIAL REMARK 1 TITL 2 NITRIC OXIDE REDUCTASE REMARK 1 REF SCIENCE V. 330 1666 2010 REMARK 1 REFN ISSN 0036-8075 REMARK 1 PMID 21109633 REMARK 1 DOI 10.1126/SCIENCE.1195591 REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.7.0029 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 33.38 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 96.1 REMARK 3 NUMBER OF REFLECTIONS : 82815 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.193 REMARK 3 R VALUE (WORKING SET) : 0.191 REMARK 3 FREE R VALUE : 0.232 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 4224 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.30 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.36 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3997 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 66.86 REMARK 3 BIN R VALUE (WORKING SET) : 0.2720 REMARK 3 BIN FREE R VALUE SET COUNT : 214 REMARK 3 BIN FREE R VALUE : 0.3130 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 8060 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 201 REMARK 3 SOLVENT ATOMS : 295 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 60.68 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.67000 REMARK 3 B22 (A**2) : -1.85000 REMARK 3 B33 (A**2) : 3.52000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.199 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.181 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.135 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 11.428 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.960 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.943 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 8528 ; 0.017 ; 0.020 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 11634 ; 1.941 ; 2.036 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 1025 ; 6.485 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 334 ;35.996 ;23.204 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1304 ;19.435 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 36 ;17.628 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1269 ; 0.146 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 6536 ; 0.012 ; 0.022 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 7 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : L 1 L 108 REMARK 3 ORIGIN FOR THE GROUP (A): 36.2016 -15.8882 -0.5099 REMARK 3 T TENSOR REMARK 3 T11: 0.1571 T22: 0.5135 REMARK 3 T33: 0.2891 T12: -0.0342 REMARK 3 T13: 0.0303 T23: -0.1083 REMARK 3 L TENSOR REMARK 3 L11: 1.0718 L22: 1.8146 REMARK 3 L33: 0.3042 L12: -1.0300 REMARK 3 L13: 0.2065 L23: 0.2653 REMARK 3 S TENSOR REMARK 3 S11: 0.0129 S12: 0.1000 S13: 0.0234 REMARK 3 S21: -0.1183 S22: 0.0632 S23: -0.1104 REMARK 3 S31: -0.0489 S32: 0.1277 S33: -0.0762 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : H 1 H 124 REMARK 3 ORIGIN FOR THE GROUP (A): 14.6109 -12.2056 -0.2931 REMARK 3 T TENSOR REMARK 3 T11: 0.1455 T22: 0.4576 REMARK 3 T33: 0.2745 T12: 0.0044 REMARK 3 T13: -0.0366 T23: -0.0951 REMARK 3 L TENSOR REMARK 3 L11: 0.9971 L22: 1.5542 REMARK 3 L33: 2.0533 L12: 0.3336 REMARK 3 L13: 0.6356 L23: 0.9193 REMARK 3 S TENSOR REMARK 3 S11: -0.0383 S12: 0.0288 S13: 0.1373 REMARK 3 S21: -0.1181 S22: -0.0510 S23: 0.1961 REMARK 3 S31: -0.1046 S32: -0.0793 S33: 0.0893 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 3 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 10 B 458 REMARK 3 RESIDUE RANGE : B 801 B 804 REMARK 3 RESIDUE RANGE : B 806 B 806 REMARK 3 ORIGIN FOR THE GROUP (A): 25.4896 24.5190 35.3825 REMARK 3 T TENSOR REMARK 3 T11: 0.3242 T22: 0.3554 REMARK 3 T33: 0.1259 T12: -0.0408 REMARK 3 T13: 0.0024 T23: -0.1043 REMARK 3 L TENSOR REMARK 3 L11: 0.4291 L22: 2.2256 REMARK 3 L33: 1.6065 L12: -0.2912 REMARK 3 L13: -0.3661 L23: 1.6010 REMARK 3 S TENSOR REMARK 3 S11: 0.0592 S12: -0.0643 S13: 0.0323 REMARK 3 S21: -0.1018 S22: 0.0819 S23: -0.1010 REMARK 3 S31: -0.3429 S32: 0.0892 S33: -0.1411 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 5 C 37 REMARK 3 ORIGIN FOR THE GROUP (A): 19.5792 15.7872 56.8791 REMARK 3 T TENSOR REMARK 3 T11: 0.5344 T22: 0.4054 REMARK 3 T33: 0.0121 T12: -0.0098 REMARK 3 T13: 0.0512 T23: -0.0414 REMARK 3 L TENSOR REMARK 3 L11: 3.2604 L22: 21.3582 REMARK 3 L33: 1.8889 L12: -6.7970 REMARK 3 L13: -1.2146 L23: 5.2026 REMARK 3 S TENSOR REMARK 3 S11: -0.0107 S12: -0.2754 S13: 0.0902 REMARK 3 S21: 0.7433 S22: -0.0209 S23: 0.0104 REMARK 3 S31: 0.4511 S32: -0.0054 S33: 0.0316 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : L 109 L 213 REMARK 3 ORIGIN FOR THE GROUP (A): 28.2174 -44.9623 -21.8759 REMARK 3 T TENSOR REMARK 3 T11: 0.2546 T22: 0.3959 REMARK 3 T33: 0.1675 T12: 0.0156 REMARK 3 T13: -0.0104 T23: -0.0450 REMARK 3 L TENSOR REMARK 3 L11: 3.3562 L22: 1.5024 REMARK 3 L33: 2.3028 L12: 0.8471 REMARK 3 L13: 1.6304 L23: 1.2696 REMARK 3 S TENSOR REMARK 3 S11: -0.0172 S12: 0.0049 S13: -0.0046 REMARK 3 S21: -0.2448 S22: 0.0232 S23: -0.0124 REMARK 3 S31: 0.0721 S32: 0.0882 S33: -0.0060 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : H 125 H 225 REMARK 3 ORIGIN FOR THE GROUP (A): 17.4380 -48.0386 -10.7885 REMARK 3 T TENSOR REMARK 3 T11: 0.1960 T22: 0.4459 REMARK 3 T33: 0.2284 T12: 0.0279 REMARK 3 T13: 0.0278 T23: -0.0080 REMARK 3 L TENSOR REMARK 3 L11: 1.6436 L22: 2.6669 REMARK 3 L33: 0.3447 L12: -0.2171 REMARK 3 L13: -0.4651 L23: 0.6954 REMARK 3 S TENSOR REMARK 3 S11: -0.0487 S12: -0.2647 S13: -0.1930 REMARK 3 S21: -0.1019 S22: -0.0368 S23: -0.0070 REMARK 3 S31: 0.0852 S32: 0.0075 S33: 0.0854 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 38 C 146 REMARK 3 RESIDUE RANGE : C 201 C 201 REMARK 3 ORIGIN FOR THE GROUP (A): 31.2893 -3.5150 28.2009 REMARK 3 T TENSOR REMARK 3 T11: 0.2273 T22: 0.3978 REMARK 3 T33: 0.2277 T12: 0.0416 REMARK 3 T13: -0.0732 T23: -0.1181 REMARK 3 L TENSOR REMARK 3 L11: 0.9800 L22: 2.3869 REMARK 3 L33: 2.3885 L12: -0.3506 REMARK 3 L13: -0.5199 L23: 1.1752 REMARK 3 S TENSOR REMARK 3 S11: -0.0593 S12: -0.0316 S13: -0.0740 REMARK 3 S21: 0.4293 S22: 0.1626 S23: -0.1672 REMARK 3 S31: 0.2903 S32: 0.2653 S33: -0.1033 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN USED IF PRESENT IN REMARK 3 THE INPUT U VALUES: WITH TLS ADDED REMARK 4 REMARK 4 3WFD COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 06-AUG-13. REMARK 100 THE DEPOSITION ID IS D_1000096265. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 07-JUL-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SPRING-8 REMARK 200 BEAMLINE : BL41XU REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.00 REMARK 200 MONOCHROMATOR : SI(111) REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX225HE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO, HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK, HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 83226 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.250 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.9 REMARK 200 DATA REDUNDANCY : 7.000 REMARK 200 R MERGE (I) : 0.09600 REMARK 200 R SYM (I) : 0.09600 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 16.2960 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.25 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.33 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 6.70 REMARK 200 R MERGE FOR SHELL (I) : 0.78300 REMARK 200 R SYM FOR SHELL (I) : 0.78300 REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.795 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: 3O0R REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 69.96 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.09 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100MM SODIUM CITRATE, PH 6.0, VAPOR REMARK 280 DIFFUSION, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 45.46350 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 98.21850 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 53.37350 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 98.21850 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 45.46350 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 53.37350 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 17030 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 39130 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -179.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: L, H, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET B 1 REMARK 465 MET B 2 REMARK 465 SER B 3 REMARK 465 PRO B 4 REMARK 465 ASN B 5 REMARK 465 GLY B 6 REMARK 465 SER B 7 REMARK 465 LEU B 8 REMARK 465 LYS B 9 REMARK 465 ARG B 459 REMARK 465 ARG B 460 REMARK 465 GLY B 461 REMARK 465 LYS B 462 REMARK 465 ALA B 463 REMARK 465 ALA B 464 REMARK 465 ALA B 465 REMARK 465 MET C 1 REMARK 465 SER C 2 REMARK 465 GLU C 3 REMARK 465 THR C 4 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP B 198 CB - CG - OD1 ANGL. DEV. = 6.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG L 30 -119.04 44.10 REMARK 500 ASN L 212 -72.07 -59.57 REMARK 500 SER H 56 -1.20 74.10 REMARK 500 SER H 99 137.98 -39.08 REMARK 500 VAL H 106 52.87 -95.46 REMARK 500 CYS H 139 126.43 -39.62 REMARK 500 ASP H 141 21.55 -70.28 REMARK 500 THR H 143 -66.20 -144.50 REMARK 500 SER H 183 -112.87 63.34 REMARK 500 PHE B 136 -6.13 72.87 REMARK 500 PRO B 140 150.80 -45.57 REMARK 500 THR B 256 -29.35 -35.22 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEM B 801 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 60 NE2 REMARK 620 2 HEM B 801 NA 89.5 REMARK 620 3 HEM B 801 NB 96.4 91.2 REMARK 620 4 HEM B 801 NC 94.2 176.4 88.7 REMARK 620 5 HEM B 801 ND 84.5 87.3 178.2 92.8 REMARK 620 6 HIS B 349 NE2 176.6 93.3 85.6 83.1 93.5 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 806 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU B 135 OE1 REMARK 620 2 GLU B 135 OE2 53.5 REMARK 620 3 HEM B 801 O2D 74.7 122.5 REMARK 620 4 HEM B 802 O2A 99.9 81.8 84.7 REMARK 620 5 HOH B 906 O 131.6 79.5 152.2 82.0 REMARK 620 6 GLY C 71 O 83.6 85.2 114.5 160.6 81.5 REMARK 620 7 TYR C 73 OH 147.7 154.2 83.2 101.3 75.6 84.4 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FE B 803 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 207 ND1 REMARK 620 2 GLU B 211 OE2 79.7 REMARK 620 3 GLU B 211 OE1 88.1 60.1 REMARK 620 4 HIS B 258 NE2 96.3 145.3 85.5 REMARK 620 5 HIS B 259 NE2 89.8 134.9 164.1 79.1 REMARK 620 6 AXO B 804 O1 161.4 82.0 85.3 100.5 101.1 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEM B 802 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 347 NE2 REMARK 620 2 HEM B 802 NA 85.0 REMARK 620 3 HEM B 802 NB 90.0 90.1 REMARK 620 4 HEM B 802 NC 92.9 177.3 88.3 REMARK 620 5 HEM B 802 ND 88.9 90.3 178.7 91.2 REMARK 620 6 AXO B 804 N 158.4 73.5 90.4 108.7 90.8 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEC C 201 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS C 65 NE2 REMARK 620 2 HEC C 201 NA 92.1 REMARK 620 3 HEC C 201 NB 87.6 90.4 REMARK 620 4 HEC C 201 NC 89.1 178.7 90.3 REMARK 620 5 HEC C 201 ND 92.8 88.6 179.0 90.7 REMARK 620 6 MET C 112 SD 177.3 85.5 91.3 93.4 88.3 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HEM B 801 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HEM B 802 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FE B 803 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE AXO B 804 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 10M B 805 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA B 806 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 10M B 807 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HEC C 201 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3O0R RELATED DB: PDB REMARK 900 RELATED ID: 3WFB RELATED DB: PDB REMARK 900 RELATED ID: 3WFC RELATED DB: PDB REMARK 900 RELATED ID: 3WFE RELATED DB: PDB DBREF 3WFD L 1 213 PDB 3WFD 3WFD 1 213 DBREF 3WFD H 1 225 PDB 3WFD 3WFD 1 225 DBREF 3WFD B 1 465 UNP Q59647 NORB_PSEAE 1 466 DBREF 3WFD C 1 146 UNP Q59646 NORC_PSEAE 1 146 SEQADV 3WFD B UNP Q59647 ARG 297 DELETION SEQADV 3WFD LYS C 100 UNP Q59646 ASN 100 CONFLICT SEQRES 1 L 213 ASP ILE GLN MET THR GLN SER PRO PRO TYR LEU ALA ALA SEQRES 2 L 213 SER PRO GLY GLU THR ILE THR ILE ASN CYS ARG ALA SER SEQRES 3 L 213 LYS SER ILE ARG LYS TYR LEU ALA TRP TYR GLN GLU LYS SEQRES 4 L 213 PRO GLY LYS THR ASN LYS LEU LEU ILE TYR SER GLY SER SEQRES 5 L 213 THR LEU GLN PHE GLY ILE PRO SER ARG PHE SER GLY SER SEQRES 6 L 213 GLY SER GLY THR GLU PHE THR LEU THR ILE SER SER LEU SEQRES 7 L 213 GLU PRO GLU ASP PHE ALA MET TYR TYR CYS GLN GLN HIS SEQRES 8 L 213 ASN GLU TYR PRO LEU THR PHE GLY ALA GLY THR LYS LEU SEQRES 9 L 213 GLU LEU LYS ARG ALA ASP ALA ALA PRO THR VAL SER ILE SEQRES 10 L 213 PHE PRO PRO SER SER GLU GLN LEU THR SER GLY GLY ALA SEQRES 11 L 213 SER VAL VAL CYS PHE LEU ASN ASN PHE TYR PRO LYS ASP SEQRES 12 L 213 ILE ASN VAL LYS TRP LYS ILE ASP GLY SER GLU ARG GLN SEQRES 13 L 213 ASN GLY VAL LEU ASN SER TRP THR ASP GLN ASP SER LYS SEQRES 14 L 213 ASP SER THR TYR SER MET SER SER THR LEU THR LEU THR SEQRES 15 L 213 LYS ASP GLU TYR GLU ARG HIS ASN SER TYR THR CYS GLU SEQRES 16 L 213 ALA THR HIS LYS THR SER THR SER PRO ILE VAL LYS SER SEQRES 17 L 213 PHE ASN ARG ASN GLU SEQRES 1 H 225 GLU VAL GLN LEU GLN GLN SER GLY THR VAL LEU ALA ARG SEQRES 2 H 225 PRO GLY ALA SER VAL LYS MET SER CYS LYS ALA SER GLY SEQRES 3 H 225 TYR SER PHE THR SER TYR TRP MET HIS TRP VAL LYS GLN SEQRES 4 H 225 ARG PRO GLY GLN GLY LEU GLU TRP ILE GLY ALA VAL TYR SEQRES 5 H 225 PRO GLY ASN SER ASP THR SER TYR ASN GLN LYS PHE LYS SEQRES 6 H 225 GLY LYS ALA LYS LEU THR ALA VAL THR SER ALA SER THR SEQRES 7 H 225 ALA TYR MET GLU LEU SER SER LEU THR ASN GLU ASP SER SEQRES 8 H 225 ALA VAL TYR TYR CYS SER ARG SER SER LEU ASP GLY TYR SEQRES 9 H 225 TYR VAL LYS ASN TRP CYS PHE ASP VAL TRP GLY GLN GLY SEQRES 10 H 225 THR THR VAL THR VAL SER SER ALA LYS THR THR ALA PRO SEQRES 11 H 225 SER VAL TYR PRO LEU ALA PRO VAL CYS GLY ASP THR THR SEQRES 12 H 225 GLY SER SER VAL THR LEU GLY CYS LEU VAL LYS GLY TYR SEQRES 13 H 225 PHE PRO GLU PRO VAL THR LEU THR TRP ASN SER GLY SER SEQRES 14 H 225 LEU SER SER GLY VAL HIS THR PHE PRO ALA VAL LEU GLN SEQRES 15 H 225 SER ASP LEU TYR THR LEU SER SER SER VAL THR VAL THR SEQRES 16 H 225 SER SER THR ARG PRO SER GLN SER ILE THR CYS ASN VAL SEQRES 17 H 225 ALA HIS PRO ALA SER SER THR LYS VAL ASP LYS LYS ILE SEQRES 18 H 225 GLU PRO ARG GLY SEQRES 1 B 465 MET MET SER PRO ASN GLY SER LEU LYS PHE ALA SER GLN SEQRES 2 B 465 ALA VAL ALA LYS PRO TYR PHE VAL PHE ALA LEU ILE LEU SEQRES 3 B 465 PHE VAL GLY GLN ILE LEU PHE GLY LEU ILE MET GLY LEU SEQRES 4 B 465 GLN TYR VAL VAL GLY ASP PHE LEU PHE PRO ALA ILE PRO SEQRES 5 B 465 PHE ASN VAL ALA ARG MET VAL HIS THR ASN LEU LEU ILE SEQRES 6 B 465 VAL TRP LEU LEU PHE GLY PHE MET GLY ALA ALA TYR TYR SEQRES 7 B 465 LEU VAL PRO GLU GLU SER ASP CYS GLU LEU TYR SER PRO SEQRES 8 B 465 LYS LEU ALA TRP ILE LEU PHE TRP VAL PHE ALA ALA ALA SEQRES 9 B 465 GLY VAL LEU THR ILE LEU GLY TYR LEU LEU VAL PRO TYR SEQRES 10 B 465 ALA GLY LEU ALA ARG LEU THR GLY ASN GLU LEU TRP PRO SEQRES 11 B 465 THR MET GLY ARG GLU PHE LEU GLU GLN PRO THR ILE SER SEQRES 12 B 465 LYS ALA GLY ILE VAL ILE VAL ALA LEU GLY PHE LEU PHE SEQRES 13 B 465 ASN VAL GLY MET THR VAL LEU ARG GLY ARG LYS THR ALA SEQRES 14 B 465 ILE SER MET VAL LEU MET THR GLY LEU ILE GLY LEU ALA SEQRES 15 B 465 LEU LEU PHE LEU PHE SER PHE TYR ASN PRO GLU ASN LEU SEQRES 16 B 465 THR ARG ASP LYS PHE TYR TRP TRP TRP VAL VAL HIS LEU SEQRES 17 B 465 TRP VAL GLU GLY VAL TRP GLU LEU ILE MET GLY ALA ILE SEQRES 18 B 465 LEU ALA PHE VAL LEU VAL LYS ILE THR GLY VAL ASP ARG SEQRES 19 B 465 GLU VAL ILE GLU LYS TRP LEU TYR VAL ILE ILE ALA MET SEQRES 20 B 465 ALA LEU ILE SER GLY ILE ILE GLY THR GLY HIS HIS TYR SEQRES 21 B 465 PHE TRP ILE GLY VAL PRO GLY TYR TRP LEU TRP LEU GLY SEQRES 22 B 465 SER VAL PHE SER ALA LEU GLU PRO LEU PRO PHE PHE ALA SEQRES 23 B 465 MET VAL LEU PHE ALA PHE ASN THR ILE ASN ARG ARG ARG SEQRES 24 B 465 ARG ASP TYR PRO ASN ARG ALA VAL ALA LEU TRP ALA MET SEQRES 25 B 465 GLY THR THR VAL MET ALA PHE LEU GLY ALA GLY VAL TRP SEQRES 26 B 465 GLY PHE MET HIS THR LEU ALA PRO VAL ASN TYR TYR THR SEQRES 27 B 465 HIS GLY THR GLN LEU THR ALA ALA HIS GLY HIS MET ALA SEQRES 28 B 465 PHE TYR GLY ALA TYR ALA MET ILE VAL MET THR ILE ILE SEQRES 29 B 465 SER TYR ALA MET PRO ARG LEU ARG GLY ILE GLY GLU ALA SEQRES 30 B 465 MET ASP ASN ARG SER GLN VAL LEU GLU MET TRP GLY PHE SEQRES 31 B 465 TRP LEU MET THR VAL ALA MET VAL PHE ILE THR LEU PHE SEQRES 32 B 465 LEU SER ALA ALA GLY VAL LEU GLN VAL TRP LEU GLN ARG SEQRES 33 B 465 MET PRO ALA ASP GLY ALA ALA MET THR PHE MET ALA THR SEQRES 34 B 465 GLN ASP GLN LEU ALA ILE PHE TYR TRP LEU ARG GLU GLY SEQRES 35 B 465 ALA GLY VAL VAL PHE LEU ILE GLY LEU VAL ALA TYR LEU SEQRES 36 B 465 LEU SER PHE ARG ARG GLY LYS ALA ALA ALA SEQRES 1 C 146 MET SER GLU THR PHE THR LYS GLY MET ALA ARG ASN ILE SEQRES 2 C 146 TYR PHE GLY GLY SER VAL PHE PHE ILE LEU LEU PHE LEU SEQRES 3 C 146 ALA LEU THR TYR HIS THR GLU LYS THR LEU PRO GLU ARG SEQRES 4 C 146 THR ASN GLU ALA ALA MET SER ALA ALA VAL VAL ARG GLY SEQRES 5 C 146 LYS LEU VAL TRP GLU GLN ASN ASN CYS VAL GLY CYS HIS SEQRES 6 C 146 THR LEU LEU GLY GLU GLY ALA TYR PHE ALA PRO GLU LEU SEQRES 7 C 146 GLY ASN VAL VAL GLY ARG ARG GLY GLY GLU GLU GLY PHE SEQRES 8 C 146 ASN THR PHE LEU GLN ALA TRP MET LYS ILE GLN PRO LEU SEQRES 9 C 146 ASN VAL PRO GLY ARG ARG ALA MET PRO GLN PHE HIS LEU SEQRES 10 C 146 SER GLU GLY GLN VAL ASP ASP LEU ALA GLU PHE LEU LYS SEQRES 11 C 146 TRP SER SER LYS ILE ASP THR ASN GLN TRP PRO PRO ASN SEQRES 12 C 146 LYS GLU GLY HET HEM B 801 43 HET HEM B 802 43 HET FE B 803 1 HET AXO B 804 4 HET 10M B 805 33 HET CA B 806 1 HET 10M B 807 33 HET HEC C 201 43 HETNAM HEM PROTOPORPHYRIN IX CONTAINING FE HETNAM FE FE (III) ION HETNAM AXO (1E)-N-HYDROXYETHANIMINE HETNAM 10M DECYL 4-O-ALPHA-D-GLUCOPYRANOSYL-1-THIO-BETA-D- HETNAM 2 10M GLUCOPYRANOSIDE HETNAM CA CALCIUM ION HETNAM HEC HEME C HETSYN HEM HEME HETSYN AXO ACETALDOXIME HETSYN 10M (2R,3R,4S,5S,6R)-2-((2R,3S,4R,5R,6S)-6-DECYLSULFANYL-4, HETSYN 2 10M 5-DIHYDROXY-2-HYDROXYMETHYL-TETRAHYDRO-PYRAN-3-YLOXY)- HETSYN 3 10M 6-HYDROXYMETHYL-TETRAHYDRO-PYRAN-3,4,5-TRIOL, N-DECYL- HETSYN 4 10M BETA-D-THIOMALTOSIDE FORMUL 5 HEM 2(C34 H32 FE N4 O4) FORMUL 7 FE FE 3+ FORMUL 8 AXO C2 H5 N O FORMUL 9 10M 2(C22 H42 O10 S) FORMUL 10 CA CA 2+ FORMUL 12 HEC C34 H34 FE N4 O4 FORMUL 13 HOH *295(H2 O) HELIX 1 1 GLU L 79 PHE L 83 5 5 HELIX 2 2 SER L 121 SER L 127 1 7 HELIX 3 3 LYS L 183 ARG L 188 1 6 HELIX 4 4 SER H 28 TYR H 32 5 5 HELIX 5 5 GLN H 62 LYS H 65 5 4 HELIX 6 6 THR H 74 ALA H 76 5 3 HELIX 7 7 THR H 87 SER H 91 5 5 HELIX 8 8 SER H 167 SER H 169 5 3 HELIX 9 9 PRO H 211 SER H 214 5 4 HELIX 10 10 PHE B 10 ALA B 14 5 5 HELIX 11 11 VAL B 15 TYR B 41 1 27 HELIX 12 12 PRO B 52 ASP B 85 1 34 HELIX 13 13 SER B 90 VAL B 115 1 26 HELIX 14 14 PRO B 116 THR B 124 1 9 HELIX 15 15 GLY B 125 TRP B 129 5 5 HELIX 16 16 PRO B 140 ARG B 164 1 25 HELIX 17 17 THR B 168 LEU B 186 1 19 HELIX 18 18 PHE B 187 TYR B 190 5 4 HELIX 19 19 ASN B 194 GLU B 211 1 18 HELIX 20 20 GLY B 212 GLY B 231 1 20 HELIX 21 21 ASP B 233 THR B 256 1 24 HELIX 22 22 GLY B 257 TYR B 260 5 4 HELIX 23 23 GLY B 267 GLU B 280 1 14 HELIX 24 24 GLU B 280 ARG B 297 1 18 HELIX 25 25 ASN B 304 ALA B 322 1 19 HELIX 26 26 ALA B 322 LEU B 331 1 10 HELIX 27 27 LEU B 331 HIS B 339 1 9 HELIX 28 28 THR B 341 MET B 368 1 28 HELIX 29 29 ASP B 379 ARG B 416 1 38 HELIX 30 30 THR B 425 LEU B 433 1 9 HELIX 31 31 LEU B 433 LEU B 456 1 24 HELIX 32 32 THR C 6 THR C 40 1 35 HELIX 33 33 ASN C 41 MET C 45 5 5 HELIX 34 34 SER C 46 ASN C 59 1 14 HELIX 35 35 ASN C 60 CYS C 64 5 5 HELIX 36 36 ASN C 80 ARG C 84 5 5 HELIX 37 37 GLY C 86 ILE C 101 1 16 HELIX 38 38 SER C 118 SER C 133 1 16 SHEET 1 A 4 MET L 4 SER L 7 0 SHEET 2 A 4 ILE L 19 ALA L 25 -1 O ASN L 22 N SER L 7 SHEET 3 A 4 GLU L 70 ILE L 75 -1 O PHE L 71 N CYS L 23 SHEET 4 A 4 PHE L 62 SER L 67 -1 N SER L 63 O THR L 74 SHEET 1 B 6 TYR L 10 ALA L 13 0 SHEET 2 B 6 THR L 102 LEU L 106 1 O GLU L 105 N LEU L 11 SHEET 3 B 6 ALA L 84 GLN L 90 -1 N ALA L 84 O LEU L 104 SHEET 4 B 6 LEU L 33 GLU L 38 -1 N GLU L 38 O MET L 85 SHEET 5 B 6 LYS L 45 TYR L 49 -1 O LEU L 47 N TRP L 35 SHEET 6 B 6 THR L 53 LEU L 54 -1 O THR L 53 N TYR L 49 SHEET 1 C 4 TYR L 10 ALA L 13 0 SHEET 2 C 4 THR L 102 LEU L 106 1 O GLU L 105 N LEU L 11 SHEET 3 C 4 ALA L 84 GLN L 90 -1 N ALA L 84 O LEU L 104 SHEET 4 C 4 THR L 97 PHE L 98 -1 O THR L 97 N GLN L 90 SHEET 1 D 4 THR L 114 PHE L 118 0 SHEET 2 D 4 GLY L 129 PHE L 139 -1 O PHE L 135 N SER L 116 SHEET 3 D 4 TYR L 173 THR L 182 -1 O LEU L 181 N ALA L 130 SHEET 4 D 4 VAL L 159 TRP L 163 -1 N LEU L 160 O THR L 178 SHEET 1 E 4 SER L 153 ARG L 155 0 SHEET 2 E 4 ASN L 145 ILE L 150 -1 N ILE L 150 O SER L 153 SHEET 3 E 4 SER L 191 THR L 197 -1 O THR L 197 N ASN L 145 SHEET 4 E 4 ILE L 205 ASN L 210 -1 O LYS L 207 N CYS L 194 SHEET 1 F 4 GLN H 3 GLN H 6 0 SHEET 2 F 4 VAL H 18 SER H 25 -1 O LYS H 23 N GLN H 5 SHEET 3 F 4 THR H 78 LEU H 83 -1 O LEU H 83 N VAL H 18 SHEET 4 F 4 ALA H 68 VAL H 73 -1 N THR H 71 O TYR H 80 SHEET 1 G 6 VAL H 10 ALA H 12 0 SHEET 2 G 6 THR H 118 VAL H 122 1 O THR H 119 N VAL H 10 SHEET 3 G 6 ALA H 92 SER H 99 -1 N TYR H 94 O THR H 118 SHEET 4 G 6 MET H 34 GLN H 39 -1 N VAL H 37 O TYR H 95 SHEET 5 G 6 LEU H 45 VAL H 51 -1 O GLU H 46 N LYS H 38 SHEET 6 G 6 THR H 58 TYR H 60 -1 O SER H 59 N ALA H 50 SHEET 1 H 4 VAL H 10 ALA H 12 0 SHEET 2 H 4 THR H 118 VAL H 122 1 O THR H 119 N VAL H 10 SHEET 3 H 4 ALA H 92 SER H 99 -1 N TYR H 94 O THR H 118 SHEET 4 H 4 PHE H 111 TRP H 114 -1 O VAL H 113 N ARG H 98 SHEET 1 I 4 SER H 131 LEU H 135 0 SHEET 2 I 4 SER H 146 TYR H 156 -1 O LYS H 154 N SER H 131 SHEET 3 I 4 LEU H 185 THR H 195 -1 O VAL H 192 N LEU H 149 SHEET 4 I 4 VAL H 174 THR H 176 -1 N HIS H 175 O SER H 191 SHEET 1 J 4 SER H 131 LEU H 135 0 SHEET 2 J 4 SER H 146 TYR H 156 -1 O LYS H 154 N SER H 131 SHEET 3 J 4 LEU H 185 THR H 195 -1 O VAL H 192 N LEU H 149 SHEET 4 J 4 VAL H 180 GLN H 182 -1 N GLN H 182 O LEU H 185 SHEET 1 K 3 THR H 162 TRP H 165 0 SHEET 2 K 3 THR H 205 HIS H 210 -1 O ASN H 207 N THR H 164 SHEET 3 K 3 THR H 215 LYS H 220 -1 O VAL H 217 N VAL H 208 SHEET 1 L 2 THR C 66 LEU C 67 0 SHEET 2 L 2 GLU C 70 GLY C 71 -1 O GLU C 70 N LEU C 67 SSBOND 1 CYS L 23 CYS L 88 1555 1555 2.13 SSBOND 2 CYS L 134 CYS L 194 1555 1555 2.05 SSBOND 3 CYS H 22 CYS H 96 1555 1555 2.10 SSBOND 4 CYS H 151 CYS H 206 1555 1555 1.97 LINK SG CYS C 61 CAB HEC C 201 1555 1555 1.79 LINK SG CYS C 64 CAC HEC C 201 1555 1555 1.96 LINK NE2 HIS B 60 FE HEM B 801 1555 1555 2.02 LINK OE1 GLU B 135 CA CA B 806 1555 1555 2.37 LINK OE2 GLU B 135 CA CA B 806 1555 1555 2.55 LINK ND1 HIS B 207 FE FE B 803 1555 1555 2.21 LINK OE2 GLU B 211 FE FE B 803 1555 1555 2.03 LINK OE1 GLU B 211 FE FE B 803 1555 1555 2.22 LINK NE2 HIS B 258 FE FE B 803 1555 1555 2.17 LINK NE2 HIS B 259 FE FE B 803 1555 1555 2.16 LINK NE2 HIS B 347 FE HEM B 802 1555 1555 2.13 LINK NE2 HIS B 349 FE HEM B 801 1555 1555 2.01 LINK O2D HEM B 801 CA CA B 806 1555 1555 2.42 LINK FE HEM B 802 N AXO B 804 1555 1555 1.95 LINK O2A HEM B 802 CA CA B 806 1555 1555 2.36 LINK FE FE B 803 O1 AXO B 804 1555 1555 2.01 LINK CA CA B 806 O HOH B 906 1555 1555 2.53 LINK CA CA B 806 O GLY C 71 1555 1555 2.56 LINK CA CA B 806 OH TYR C 73 1555 1555 2.74 LINK NE2 HIS C 65 FE HEC C 201 1555 1555 1.97 LINK SD MET C 112 FE HEC C 201 1555 1555 2.33 CISPEP 1 SER L 7 PRO L 8 0 -5.76 CISPEP 2 TYR L 94 PRO L 95 0 -7.95 CISPEP 3 TYR L 140 PRO L 141 0 -2.28 CISPEP 4 PHE H 157 PRO H 158 0 -6.61 CISPEP 5 GLU H 159 PRO H 160 0 9.19 CISPEP 6 ARG H 199 PRO H 200 0 4.59 CISPEP 7 PHE B 48 PRO B 49 0 3.29 CISPEP 8 GLN C 102 PRO C 103 0 -1.71 CISPEP 9 TRP C 140 PRO C 141 0 -0.63 SITE 1 AC1 21 GLN B 30 ILE B 31 GLY B 34 MET B 37 SITE 2 AC1 21 TYR B 41 PHE B 53 ARG B 57 HIS B 60 SITE 3 AC1 21 GLU B 135 PHE B 136 HIS B 349 PHE B 352 SITE 4 AC1 21 TYR B 353 MET B 397 ARG B 440 GLY B 444 SITE 5 AC1 21 HEM B 802 CA B 806 HOH B 918 ALA C 72 SITE 6 AC1 21 TYR C 73 SITE 1 AC2 27 GLU B 135 PHE B 136 TRP B 203 VAL B 210 SITE 2 AC2 27 GLU B 211 HIS B 258 SER B 277 GLU B 280 SITE 3 AC2 27 ALA B 322 GLY B 326 PHE B 327 HIS B 329 SITE 4 AC2 27 THR B 330 ASN B 335 HIS B 339 GLY B 340 SITE 5 AC2 27 THR B 344 HIS B 347 ALA B 351 PHE B 352 SITE 6 AC2 27 ALA B 355 TYR B 356 HEM B 801 AXO B 804 SITE 7 AC2 27 CA B 806 HOH B 906 HOH B 927 SITE 1 AC3 5 HIS B 207 GLU B 211 HIS B 258 HIS B 259 SITE 2 AC3 5 AXO B 804 SITE 1 AC4 6 VAL B 206 GLU B 211 HIS B 258 HIS B 259 SITE 2 AC4 6 HEM B 802 FE B 803 SITE 1 AC5 4 MET B 328 TYR B 337 MET B 417 10M B 807 SITE 1 AC6 7 ARG B 57 GLU B 135 HEM B 801 HEM B 802 SITE 2 AC6 7 HOH B 906 GLY C 71 TYR C 73 SITE 1 AC7 8 LEU B 270 TRP B 271 TYR B 336 TYR B 337 SITE 2 AC7 8 10M B 805 ASN C 138 GLN C 139 PRO C 142 SITE 1 AC8 21 CYS C 61 CYS C 64 HIS C 65 ALA C 75 SITE 2 AC8 21 PRO C 76 LEU C 78 ARG C 84 ARG C 85 SITE 3 AC8 21 TRP C 98 LEU C 104 ARG C 109 ARG C 110 SITE 4 AC8 21 ALA C 111 MET C 112 PRO C 113 PHE C 115 SITE 5 AC8 21 LEU C 125 HOH C 306 HOH C 313 HOH C 315 SITE 6 AC8 21 HOH C 342 CRYST1 90.927 106.747 196.437 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010998 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009368 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005091 0.00000