data_3WHD # _entry.id 3WHD # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.281 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 3WHD RCSB RCSB096336 WWPDB D_1000096336 # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 3WH2 . unspecified PDB 3WH3 . unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3WHD _pdbx_database_status.recvd_initial_deposition_date 2013-08-24 _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Furukawa, A.' 1 'Kamishikiryo, J.' 2 'Mori, D.' 3 'Toyonaga, K.' 4 'Okabe, Y.' 5 'Toji, A.' 6 'Kanda, R.' 7 'Miyake, Y.' 8 'Ose, T.' 9 'Yamasaki, S.' 10 'Maenaka, K.' 11 # _citation.id primary _citation.title 'Structural analysis for glycolipid recognition by the C-type lectins Mincle and MCL' _citation.journal_abbrev Proc.Natl.Acad.Sci.USA _citation.journal_volume 110 _citation.page_first 17438 _citation.page_last 17443 _citation.year 2013 _citation.journal_id_ASTM PNASA6 _citation.country US _citation.journal_id_ISSN 0027-8424 _citation.journal_id_CSD 0040 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 24101491 _citation.pdbx_database_id_DOI 10.1073/pnas.1312649110 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Furukawa, A.' 1 primary 'Kamishikiryo, J.' 2 primary 'Mori, D.' 3 primary 'Toyonaga, K.' 4 primary 'Okabe, Y.' 5 primary 'Toji, A.' 6 primary 'Kanda, R.' 7 primary 'Miyake, Y.' 8 primary 'Ose, T.' 9 primary 'Yamasaki, S.' 10 primary 'Maenaka, K.' 11 # _cell.entry_id 3WHD _cell.length_a 85.190 _cell.length_b 96.056 _cell.length_c 104.826 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3WHD _symmetry.space_group_name_H-M 'I 2 2 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'C-type lectin domain family 4 member D' 18266.561 2 ? ? 'extracellular domain, UNP residues 61-215' ? 2 non-polymer syn 'CALCIUM ION' 40.078 2 ? ? ? ? 3 water nat water 18.015 231 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'C-type lectin superfamily member 8, C-type lectin-like receptor 6, CLEC-6' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MHAKLKCIKEKSELKSAEGSTWNCCPIDWRAFQSNCYFPLTDNKTWAESERNCSGMGAHLMTISTEAEQNFIIQFLDRRL SYFLGLRDENAKGQWRWVDQTPFNPRRVFWHKNEPDNSQGENCVVLVYNQDKWAWNDVPCNFEASRICKIPGTTLN ; _entity_poly.pdbx_seq_one_letter_code_can ;MHAKLKCIKEKSELKSAEGSTWNCCPIDWRAFQSNCYFPLTDNKTWAESERNCSGMGAHLMTISTEAEQNFIIQFLDRRL SYFLGLRDENAKGQWRWVDQTPFNPRRVFWHKNEPDNSQGENCVVLVYNQDKWAWNDVPCNFEASRICKIPGTTLN ; _entity_poly.pdbx_strand_id A,C _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 HIS n 1 3 ALA n 1 4 LYS n 1 5 LEU n 1 6 LYS n 1 7 CYS n 1 8 ILE n 1 9 LYS n 1 10 GLU n 1 11 LYS n 1 12 SER n 1 13 GLU n 1 14 LEU n 1 15 LYS n 1 16 SER n 1 17 ALA n 1 18 GLU n 1 19 GLY n 1 20 SER n 1 21 THR n 1 22 TRP n 1 23 ASN n 1 24 CYS n 1 25 CYS n 1 26 PRO n 1 27 ILE n 1 28 ASP n 1 29 TRP n 1 30 ARG n 1 31 ALA n 1 32 PHE n 1 33 GLN n 1 34 SER n 1 35 ASN n 1 36 CYS n 1 37 TYR n 1 38 PHE n 1 39 PRO n 1 40 LEU n 1 41 THR n 1 42 ASP n 1 43 ASN n 1 44 LYS n 1 45 THR n 1 46 TRP n 1 47 ALA n 1 48 GLU n 1 49 SER n 1 50 GLU n 1 51 ARG n 1 52 ASN n 1 53 CYS n 1 54 SER n 1 55 GLY n 1 56 MET n 1 57 GLY n 1 58 ALA n 1 59 HIS n 1 60 LEU n 1 61 MET n 1 62 THR n 1 63 ILE n 1 64 SER n 1 65 THR n 1 66 GLU n 1 67 ALA n 1 68 GLU n 1 69 GLN n 1 70 ASN n 1 71 PHE n 1 72 ILE n 1 73 ILE n 1 74 GLN n 1 75 PHE n 1 76 LEU n 1 77 ASP n 1 78 ARG n 1 79 ARG n 1 80 LEU n 1 81 SER n 1 82 TYR n 1 83 PHE n 1 84 LEU n 1 85 GLY n 1 86 LEU n 1 87 ARG n 1 88 ASP n 1 89 GLU n 1 90 ASN n 1 91 ALA n 1 92 LYS n 1 93 GLY n 1 94 GLN n 1 95 TRP n 1 96 ARG n 1 97 TRP n 1 98 VAL n 1 99 ASP n 1 100 GLN n 1 101 THR n 1 102 PRO n 1 103 PHE n 1 104 ASN n 1 105 PRO n 1 106 ARG n 1 107 ARG n 1 108 VAL n 1 109 PHE n 1 110 TRP n 1 111 HIS n 1 112 LYS n 1 113 ASN n 1 114 GLU n 1 115 PRO n 1 116 ASP n 1 117 ASN n 1 118 SER n 1 119 GLN n 1 120 GLY n 1 121 GLU n 1 122 ASN n 1 123 CYS n 1 124 VAL n 1 125 VAL n 1 126 LEU n 1 127 VAL n 1 128 TYR n 1 129 ASN n 1 130 GLN n 1 131 ASP n 1 132 LYS n 1 133 TRP n 1 134 ALA n 1 135 TRP n 1 136 ASN n 1 137 ASP n 1 138 VAL n 1 139 PRO n 1 140 CYS n 1 141 ASN n 1 142 PHE n 1 143 GLU n 1 144 ALA n 1 145 SER n 1 146 ARG n 1 147 ILE n 1 148 CYS n 1 149 LYS n 1 150 ILE n 1 151 PRO n 1 152 GLY n 1 153 THR n 1 154 THR n 1 155 LEU n 1 156 ASN n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene CLEC4D _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3) plysS' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET22b _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code CLC4D_HUMAN _struct_ref.pdbx_db_accession Q8WXI8 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;HAKLKCIKEKSELKSAEGSTWNCCPIDWRAFQSNCYFPLTDNKTWAESERNCSGMGAHLMTISTEAEQNFIIQFLDRRLS YFLGLRDENAKGQWRWVDQTPFNPRRVFWHKNEPDNSQGENCVVLVYNQDKWAWNDVPCNFEASRICKIPGTTLN ; _struct_ref.pdbx_align_begin 61 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3WHD A 2 ? 156 ? Q8WXI8 61 ? 215 ? 61 215 2 1 3WHD C 2 ? 156 ? Q8WXI8 61 ? 215 ? 61 215 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3WHD MET A 1 ? UNP Q8WXI8 ? ? 'EXPRESSION TAG' 60 1 2 3WHD MET C 1 ? UNP Q8WXI8 ? ? 'EXPRESSION TAG' 60 2 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CA non-polymer . 'CALCIUM ION' ? 'Ca 2' 40.078 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 3WHD _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.93 _exptl_crystal.density_percent_sol 58.09 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type ? _diffrn_detector.pdbx_collection_date 2011-04-12 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator silicon _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.0 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'SPRING-8 BEAMLINE BL32XU' _diffrn_source.pdbx_synchrotron_site SPring-8 _diffrn_source.pdbx_synchrotron_beamline BL32XU _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.0 # _reflns.entry_id 3WHD _reflns.observed_criterion_sigma_I 0 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 40.483 _reflns.d_resolution_high 2.29 _reflns.number_obs 19569 _reflns.number_all ? _reflns.percent_possible_obs 100 _reflns.pdbx_Rmerge_I_obs 0.141 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 8.65 _reflns.B_iso_Wilson_estimate 21.9 _reflns.pdbx_redundancy 7.2 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _refine.entry_id 3WHD _refine.ls_number_reflns_obs 19567 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.35 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 40.483 _refine.ls_d_res_high 2.290 _refine.ls_percent_reflns_obs 99.22 _refine.ls_R_factor_obs 0.1778 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.1758 _refine.ls_R_factor_R_free 0.2180 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.01 _refine.ls_number_reflns_R_free 980 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.B_iso_mean 34.8584 _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.22 _refine.overall_FOM_work_R_set 0.8372 _refine.B_iso_max 90.180 _refine.B_iso_min 18.050 _refine.pdbx_overall_phase_error 22.6200 _refine.occupancy_max 1.000 _refine.occupancy_min 1.000 _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_redundancy_reflns_obs ? _refine.overall_SU_B ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2426 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 2 _refine_hist.number_atoms_solvent 231 _refine_hist.number_atoms_total 2659 _refine_hist.d_res_high 2.290 _refine_hist.d_res_low 40.483 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' f_bond_d 2504 0.009 ? ? ? 'X-RAY DIFFRACTION' f_angle_d 3387 1.171 ? ? ? 'X-RAY DIFFRACTION' f_chiral_restr 341 0.100 ? ? ? 'X-RAY DIFFRACTION' f_plane_restr 442 0.004 ? ? ? 'X-RAY DIFFRACTION' f_dihedral_angle_d 905 15.457 ? ? ? # loop_ _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.percent_reflns_obs _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_R_work _refine_ls_shell.R_factor_R_free _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.pdbx_refine_id _refine_ls_shell.redundancy_reflns_obs 2.2898 2.4105 7 94.0000 2476 . 0.2120 0.2664 . 134 . 2610 . 'X-RAY DIFFRACTION' . 2.4105 2.5615 7 100.0000 2650 . 0.1982 0.2683 . 134 . 2784 . 'X-RAY DIFFRACTION' . 2.5615 2.7592 7 100.0000 2648 . 0.2028 0.2703 . 138 . 2786 . 'X-RAY DIFFRACTION' . 2.7592 3.0368 7 100.0000 2629 . 0.1930 0.2582 . 149 . 2778 . 'X-RAY DIFFRACTION' . 3.0368 3.4760 7 100.0000 2682 . 0.1799 0.2225 . 138 . 2820 . 'X-RAY DIFFRACTION' . 3.4760 4.3786 7 100.0000 2694 . 0.1538 0.1845 . 145 . 2839 . 'X-RAY DIFFRACTION' . 4.3786 40.4888 7 100.0000 2808 . 0.1621 0.1866 . 142 . 2950 . 'X-RAY DIFFRACTION' . # _struct.entry_id 3WHD _struct.title 'C-type lectin, human MCL' _struct.pdbx_descriptor 'C-type lectin domain family 4 member D' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3WHD _struct_keywords.pdbx_keywords 'IMMUNE SYSTEM' _struct_keywords.text 'c-type lectin, carbohydrate recognition, glycolipid binding, Plasmamembrane, IMMUNE SYSTEM' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? E N N 3 ? F N N 3 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 THR A 45 ? GLY A 55 ? THR A 104 GLY A 114 1 ? 11 HELX_P HELX_P2 2 THR A 65 ? GLN A 74 ? THR A 124 GLN A 133 1 ? 10 HELX_P HELX_P3 3 THR B 45 ? GLY B 55 ? THR C 104 GLY C 114 1 ? 11 HELX_P HELX_P4 4 THR B 65 ? ILE B 73 ? THR C 124 ILE C 132 1 ? 9 HELX_P HELX_P5 5 GLN B 74 ? LEU B 76 ? GLN C 133 LEU C 135 5 ? 3 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf1 disulf ? ? A CYS 7 SG ? ? ? 1_555 A CYS 24 SG ? ? A CYS 66 A CYS 83 1_555 ? ? ? ? ? ? ? 2.047 ? disulf2 disulf ? ? A CYS 25 SG ? ? ? 1_555 A CYS 36 SG ? ? A CYS 84 A CYS 95 1_555 ? ? ? ? ? ? ? 2.049 ? disulf3 disulf ? ? A CYS 53 SG ? ? ? 1_555 A CYS 148 SG ? ? A CYS 112 A CYS 207 1_555 ? ? ? ? ? ? ? 2.048 ? disulf4 disulf ? ? A CYS 123 SG ? ? ? 1_555 A CYS 140 SG ? ? A CYS 182 A CYS 199 1_555 ? ? ? ? ? ? ? 2.051 ? disulf5 disulf ? ? B CYS 7 SG ? ? ? 1_555 B CYS 24 SG ? ? C CYS 66 C CYS 83 1_555 ? ? ? ? ? ? ? 2.061 ? disulf6 disulf ? ? B CYS 25 SG ? ? ? 1_555 B CYS 36 SG ? ? C CYS 84 C CYS 95 1_555 ? ? ? ? ? ? ? 2.044 ? disulf7 disulf ? ? B CYS 53 SG ? ? ? 1_555 B CYS 148 SG ? ? C CYS 112 C CYS 207 1_555 ? ? ? ? ? ? ? 2.074 ? disulf8 disulf ? ? B CYS 123 SG ? ? ? 1_555 B CYS 140 SG ? ? C CYS 182 C CYS 199 1_555 ? ? ? ? ? ? ? 2.035 ? metalc1 metalc ? ? A ASN 136 OD1 ? ? ? 1_555 C CA . CA ? ? A ASN 195 A CA 501 1_555 ? ? ? ? ? ? ? 2.343 ? metalc2 metalc ? ? B ASP 137 O ? ? ? 1_555 D CA . CA ? ? C ASP 196 C CA 501 1_555 ? ? ? ? ? ? ? 2.344 ? metalc3 metalc ? ? B GLU 114 OE1 ? ? ? 1_555 D CA . CA ? ? C GLU 173 C CA 501 1_555 ? ? ? ? ? ? ? 2.367 ? metalc4 metalc ? ? B ASP 137 OD1 ? ? ? 1_555 D CA . CA ? ? C ASP 196 C CA 501 1_555 ? ? ? ? ? ? ? 2.384 ? metalc5 metalc ? ? A ASP 137 OD1 ? ? ? 1_555 C CA . CA ? ? A ASP 196 A CA 501 1_555 ? ? ? ? ? ? ? 2.386 ? metalc6 metalc ? ? A GLU 114 OE1 ? ? ? 1_555 C CA . CA ? ? A GLU 173 A CA 501 1_555 ? ? ? ? ? ? ? 2.390 ? metalc7 metalc ? ? B ASP 116 OD1 ? ? ? 1_555 D CA . CA ? ? C ASP 175 C CA 501 1_555 ? ? ? ? ? ? ? 2.397 ? metalc8 metalc ? ? A ASP 116 OD1 ? ? ? 1_555 C CA . CA ? ? A ASP 175 A CA 501 1_555 ? ? ? ? ? ? ? 2.434 ? metalc9 metalc ? ? B ASN 136 OD1 ? ? ? 1_555 D CA . CA ? ? C ASN 195 C CA 501 1_555 ? ? ? ? ? ? ? 2.446 ? metalc10 metalc ? ? A ASP 137 O ? ? ? 1_555 C CA . CA ? ? A ASP 196 A CA 501 1_555 ? ? ? ? ? ? ? 2.491 ? metalc11 metalc ? ? D CA . CA ? ? ? 1_555 F HOH . O ? ? C CA 501 C HOH 693 1_555 ? ? ? ? ? ? ? 2.402 ? metalc12 metalc ? ? D CA . CA ? ? ? 1_555 F HOH . O ? ? C CA 501 C HOH 624 1_555 ? ? ? ? ? ? ? 2.436 ? metalc13 metalc ? ? C CA . CA ? ? ? 1_555 E HOH . O ? ? A CA 501 A HOH 680 1_555 ? ? ? ? ? ? ? 2.452 ? metalc14 metalc ? ? C CA . CA ? ? ? 1_555 E HOH . O ? ? A CA 501 A HOH 687 1_555 ? ? ? ? ? ? ? 2.495 ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? metalc ? ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 GLU 114 A . ? GLU 173 A PRO 115 A ? PRO 174 A 1 -1.37 2 LEU 155 A . ? LEU 214 A ASN 156 A ? ASN 215 A 1 -6.16 3 GLU 114 B . ? GLU 173 C PRO 115 B ? PRO 174 C 1 -1.80 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 6 ? B ? 5 ? C ? 5 ? D ? 5 ? E ? 5 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? parallel B 4 5 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? parallel C 3 4 ? anti-parallel C 4 5 ? anti-parallel D 1 2 ? anti-parallel D 2 3 ? anti-parallel D 3 4 ? parallel D 4 5 ? anti-parallel E 1 2 ? anti-parallel E 2 3 ? parallel E 3 4 ? anti-parallel E 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 THR A 153 ? LEU A 155 ? THR A 212 LEU A 214 A 2 TRP A 22 ? PRO A 26 ? TRP A 81 PRO A 85 A 3 LYS A 4 ? ILE A 8 ? LYS A 63 ILE A 67 A 4 LYS B 4 ? LYS B 9 ? LYS C 63 LYS C 68 A 5 TRP B 22 ? PRO B 26 ? TRP C 81 PRO C 85 A 6 THR B 153 ? LEU B 155 ? THR C 212 LEU C 214 B 1 ARG A 30 ? PHE A 32 ? ARG A 89 PHE A 91 B 2 ASN A 35 ? LYS A 44 ? ASN A 94 LYS A 103 B 3 ALA A 144 ? PRO A 151 ? ALA A 203 PRO A 210 B 4 TYR A 82 ? ASP A 88 ? TYR A 141 ASP A 147 B 5 ARG A 96 ? TRP A 97 ? ARG A 155 TRP A 156 C 1 HIS A 59 ? LEU A 60 ? HIS A 118 LEU A 119 C 2 ALA A 144 ? PRO A 151 ? ALA A 203 PRO A 210 C 3 TYR A 82 ? ASP A 88 ? TYR A 141 ASP A 147 C 4 ASN A 122 ? TYR A 128 ? ASN A 181 TYR A 187 C 5 TRP A 133 ? PRO A 139 ? TRP A 192 PRO A 198 D 1 ARG B 30 ? PHE B 32 ? ARG C 89 PHE C 91 D 2 ASN B 35 ? LYS B 44 ? ASN C 94 LYS C 103 D 3 ALA B 144 ? PRO B 151 ? ALA C 203 PRO C 210 D 4 TYR B 82 ? ASP B 88 ? TYR C 141 ASP C 147 D 5 ARG B 96 ? TRP B 97 ? ARG C 155 TRP C 156 E 1 HIS B 59 ? LEU B 60 ? HIS C 118 LEU C 119 E 2 ALA B 144 ? PRO B 151 ? ALA C 203 PRO C 210 E 3 TYR B 82 ? ASP B 88 ? TYR C 141 ASP C 147 E 4 ASN B 122 ? ASN B 129 ? ASN C 181 ASN C 188 E 5 LYS B 132 ? PRO B 139 ? LYS C 191 PRO C 198 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O LEU A 155 ? O LEU A 214 N TRP A 22 ? N TRP A 81 A 2 3 O ASN A 23 ? O ASN A 82 N ILE A 8 ? N ILE A 67 A 3 4 N CYS A 7 ? N CYS A 66 O LEU B 5 ? O LEU C 64 A 4 5 N ILE B 8 ? N ILE C 67 O ASN B 23 ? O ASN C 82 A 5 6 N TRP B 22 ? N TRP C 81 O LEU B 155 ? O LEU C 214 B 1 2 N ARG A 30 ? N ARG A 89 O TYR A 37 ? O TYR A 96 B 2 3 N LEU A 40 ? N LEU A 99 O ARG A 146 ? O ARG A 205 B 3 4 O SER A 145 ? O SER A 204 N PHE A 83 ? N PHE A 142 B 4 5 N ARG A 87 ? N ARG A 146 O ARG A 96 ? O ARG A 155 C 1 2 N HIS A 59 ? N HIS A 118 O LYS A 149 ? O LYS A 208 C 2 3 O SER A 145 ? O SER A 204 N PHE A 83 ? N PHE A 142 C 3 4 N ASP A 88 ? N ASP A 147 O ASN A 122 ? O ASN A 181 C 4 5 N CYS A 123 ? N CYS A 182 O VAL A 138 ? O VAL A 197 D 1 2 N ARG B 30 ? N ARG C 89 O TYR B 37 ? O TYR C 96 D 2 3 N LEU B 40 ? N LEU C 99 O ARG B 146 ? O ARG C 205 D 3 4 O SER B 145 ? O SER C 204 N PHE B 83 ? N PHE C 142 D 4 5 N ARG B 87 ? N ARG C 146 O ARG B 96 ? O ARG C 155 E 1 2 N HIS B 59 ? N HIS C 118 O LYS B 149 ? O LYS C 208 E 2 3 O SER B 145 ? O SER C 204 N PHE B 83 ? N PHE C 142 E 3 4 N LEU B 84 ? N LEU C 143 O VAL B 124 ? O VAL C 183 E 4 5 N CYS B 123 ? N CYS C 182 O VAL B 138 ? O VAL C 197 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 7 'BINDING SITE FOR RESIDUE CA A 501' AC2 Software ? ? ? ? 6 'BINDING SITE FOR RESIDUE CA C 501' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 7 GLU A 114 ? GLU A 173 . ? 1_555 ? 2 AC1 7 ASP A 116 ? ASP A 175 . ? 1_555 ? 3 AC1 7 ASN A 117 ? ASN A 176 . ? 1_555 ? 4 AC1 7 ASN A 136 ? ASN A 195 . ? 1_555 ? 5 AC1 7 ASP A 137 ? ASP A 196 . ? 1_555 ? 6 AC1 7 HOH E . ? HOH A 680 . ? 1_555 ? 7 AC1 7 HOH E . ? HOH A 687 . ? 1_555 ? 8 AC2 6 GLU B 114 ? GLU C 173 . ? 1_555 ? 9 AC2 6 ASP B 116 ? ASP C 175 . ? 1_555 ? 10 AC2 6 ASN B 136 ? ASN C 195 . ? 1_555 ? 11 AC2 6 ASP B 137 ? ASP C 196 . ? 1_555 ? 12 AC2 6 HOH F . ? HOH C 624 . ? 1_555 ? 13 AC2 6 HOH F . ? HOH C 693 . ? 1_555 ? # _database_PDB_matrix.entry_id 3WHD _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3WHD _atom_sites.fract_transf_matrix[1][1] 0.011738 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.010411 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.009540 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CA N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 60 ? ? ? A . n A 1 2 HIS 2 61 61 HIS HIS A . n A 1 3 ALA 3 62 62 ALA ALA A . n A 1 4 LYS 4 63 63 LYS LYS A . n A 1 5 LEU 5 64 64 LEU LEU A . n A 1 6 LYS 6 65 65 LYS LYS A . n A 1 7 CYS 7 66 66 CYS CYS A . n A 1 8 ILE 8 67 67 ILE ILE A . n A 1 9 LYS 9 68 68 LYS LYS A . n A 1 10 GLU 10 69 ? ? ? A . n A 1 11 LYS 11 70 ? ? ? A . n A 1 12 SER 12 71 ? ? ? A . n A 1 13 GLU 13 72 ? ? ? A . n A 1 14 LEU 14 73 ? ? ? A . n A 1 15 LYS 15 74 ? ? ? A . n A 1 16 SER 16 75 ? ? ? A . n A 1 17 ALA 17 76 ? ? ? A . n A 1 18 GLU 18 77 ? ? ? A . n A 1 19 GLY 19 78 ? ? ? A . n A 1 20 SER 20 79 79 SER SER A . n A 1 21 THR 21 80 80 THR THR A . n A 1 22 TRP 22 81 81 TRP TRP A . n A 1 23 ASN 23 82 82 ASN ASN A . n A 1 24 CYS 24 83 83 CYS CYS A . n A 1 25 CYS 25 84 84 CYS CYS A . n A 1 26 PRO 26 85 85 PRO PRO A . n A 1 27 ILE 27 86 86 ILE ILE A . n A 1 28 ASP 28 87 87 ASP ASP A . n A 1 29 TRP 29 88 88 TRP TRP A . n A 1 30 ARG 30 89 89 ARG ARG A . n A 1 31 ALA 31 90 90 ALA ALA A . n A 1 32 PHE 32 91 91 PHE PHE A . n A 1 33 GLN 33 92 92 GLN GLN A . n A 1 34 SER 34 93 93 SER SER A . n A 1 35 ASN 35 94 94 ASN ASN A . n A 1 36 CYS 36 95 95 CYS CYS A . n A 1 37 TYR 37 96 96 TYR TYR A . n A 1 38 PHE 38 97 97 PHE PHE A . n A 1 39 PRO 39 98 98 PRO PRO A . n A 1 40 LEU 40 99 99 LEU LEU A . n A 1 41 THR 41 100 100 THR THR A . n A 1 42 ASP 42 101 101 ASP ASP A . n A 1 43 ASN 43 102 102 ASN ASN A . n A 1 44 LYS 44 103 103 LYS LYS A . n A 1 45 THR 45 104 104 THR THR A . n A 1 46 TRP 46 105 105 TRP TRP A . n A 1 47 ALA 47 106 106 ALA ALA A . n A 1 48 GLU 48 107 107 GLU GLU A . n A 1 49 SER 49 108 108 SER SER A . n A 1 50 GLU 50 109 109 GLU GLU A . n A 1 51 ARG 51 110 110 ARG ARG A . n A 1 52 ASN 52 111 111 ASN ASN A . n A 1 53 CYS 53 112 112 CYS CYS A . n A 1 54 SER 54 113 113 SER SER A . n A 1 55 GLY 55 114 114 GLY GLY A . n A 1 56 MET 56 115 115 MET MET A . n A 1 57 GLY 57 116 116 GLY GLY A . n A 1 58 ALA 58 117 117 ALA ALA A . n A 1 59 HIS 59 118 118 HIS HIS A . n A 1 60 LEU 60 119 119 LEU LEU A . n A 1 61 MET 61 120 120 MET MET A . n A 1 62 THR 62 121 121 THR THR A . n A 1 63 ILE 63 122 122 ILE ILE A . n A 1 64 SER 64 123 123 SER SER A . n A 1 65 THR 65 124 124 THR THR A . n A 1 66 GLU 66 125 125 GLU GLU A . n A 1 67 ALA 67 126 126 ALA ALA A . n A 1 68 GLU 68 127 127 GLU GLU A . n A 1 69 GLN 69 128 128 GLN GLN A . n A 1 70 ASN 70 129 129 ASN ASN A . n A 1 71 PHE 71 130 130 PHE PHE A . n A 1 72 ILE 72 131 131 ILE ILE A . n A 1 73 ILE 73 132 132 ILE ILE A . n A 1 74 GLN 74 133 133 GLN GLN A . n A 1 75 PHE 75 134 134 PHE PHE A . n A 1 76 LEU 76 135 135 LEU LEU A . n A 1 77 ASP 77 136 136 ASP ASP A . n A 1 78 ARG 78 137 137 ARG ARG A . n A 1 79 ARG 79 138 138 ARG ARG A . n A 1 80 LEU 80 139 139 LEU LEU A . n A 1 81 SER 81 140 140 SER SER A . n A 1 82 TYR 82 141 141 TYR TYR A . n A 1 83 PHE 83 142 142 PHE PHE A . n A 1 84 LEU 84 143 143 LEU LEU A . n A 1 85 GLY 85 144 144 GLY GLY A . n A 1 86 LEU 86 145 145 LEU LEU A . n A 1 87 ARG 87 146 146 ARG ARG A . n A 1 88 ASP 88 147 147 ASP ASP A . n A 1 89 GLU 89 148 148 GLU GLU A . n A 1 90 ASN 90 149 149 ASN ASN A . n A 1 91 ALA 91 150 150 ALA ALA A . n A 1 92 LYS 92 151 151 LYS LYS A . n A 1 93 GLY 93 152 152 GLY GLY A . n A 1 94 GLN 94 153 153 GLN GLN A . n A 1 95 TRP 95 154 154 TRP TRP A . n A 1 96 ARG 96 155 155 ARG ARG A . n A 1 97 TRP 97 156 156 TRP TRP A . n A 1 98 VAL 98 157 157 VAL VAL A . n A 1 99 ASP 99 158 158 ASP ASP A . n A 1 100 GLN 100 159 159 GLN GLN A . n A 1 101 THR 101 160 160 THR THR A . n A 1 102 PRO 102 161 161 PRO PRO A . n A 1 103 PHE 103 162 162 PHE PHE A . n A 1 104 ASN 104 163 163 ASN ASN A . n A 1 105 PRO 105 164 164 PRO PRO A . n A 1 106 ARG 106 165 165 ARG ARG A . n A 1 107 ARG 107 166 166 ARG ARG A . n A 1 108 VAL 108 167 167 VAL VAL A . n A 1 109 PHE 109 168 168 PHE PHE A . n A 1 110 TRP 110 169 169 TRP TRP A . n A 1 111 HIS 111 170 170 HIS HIS A . n A 1 112 LYS 112 171 171 LYS LYS A . n A 1 113 ASN 113 172 172 ASN ASN A . n A 1 114 GLU 114 173 173 GLU GLU A . n A 1 115 PRO 115 174 174 PRO PRO A . n A 1 116 ASP 116 175 175 ASP ASP A . n A 1 117 ASN 117 176 176 ASN ASN A . n A 1 118 SER 118 177 177 SER SER A . n A 1 119 GLN 119 178 178 GLN GLN A . n A 1 120 GLY 120 179 179 GLY GLY A . n A 1 121 GLU 121 180 180 GLU GLU A . n A 1 122 ASN 122 181 181 ASN ASN A . n A 1 123 CYS 123 182 182 CYS CYS A . n A 1 124 VAL 124 183 183 VAL VAL A . n A 1 125 VAL 125 184 184 VAL VAL A . n A 1 126 LEU 126 185 185 LEU LEU A . n A 1 127 VAL 127 186 186 VAL VAL A . n A 1 128 TYR 128 187 187 TYR TYR A . n A 1 129 ASN 129 188 188 ASN ASN A . n A 1 130 GLN 130 189 189 GLN GLN A . n A 1 131 ASP 131 190 190 ASP ASP A . n A 1 132 LYS 132 191 191 LYS LYS A . n A 1 133 TRP 133 192 192 TRP TRP A . n A 1 134 ALA 134 193 193 ALA ALA A . n A 1 135 TRP 135 194 194 TRP TRP A . n A 1 136 ASN 136 195 195 ASN ASN A . n A 1 137 ASP 137 196 196 ASP ASP A . n A 1 138 VAL 138 197 197 VAL VAL A . n A 1 139 PRO 139 198 198 PRO PRO A . n A 1 140 CYS 140 199 199 CYS CYS A . n A 1 141 ASN 141 200 200 ASN ASN A . n A 1 142 PHE 142 201 201 PHE PHE A . n A 1 143 GLU 143 202 202 GLU GLU A . n A 1 144 ALA 144 203 203 ALA ALA A . n A 1 145 SER 145 204 204 SER SER A . n A 1 146 ARG 146 205 205 ARG ARG A . n A 1 147 ILE 147 206 206 ILE ILE A . n A 1 148 CYS 148 207 207 CYS CYS A . n A 1 149 LYS 149 208 208 LYS LYS A . n A 1 150 ILE 150 209 209 ILE ILE A . n A 1 151 PRO 151 210 210 PRO PRO A . n A 1 152 GLY 152 211 211 GLY GLY A . n A 1 153 THR 153 212 212 THR THR A . n A 1 154 THR 154 213 213 THR THR A . n A 1 155 LEU 155 214 214 LEU LEU A . n A 1 156 ASN 156 215 215 ASN ASN A . n B 1 1 MET 1 60 60 MET MET C . n B 1 2 HIS 2 61 61 HIS HIS C . n B 1 3 ALA 3 62 62 ALA ALA C . n B 1 4 LYS 4 63 63 LYS LYS C . n B 1 5 LEU 5 64 64 LEU LEU C . n B 1 6 LYS 6 65 65 LYS LYS C . n B 1 7 CYS 7 66 66 CYS CYS C . n B 1 8 ILE 8 67 67 ILE ILE C . n B 1 9 LYS 9 68 68 LYS LYS C . n B 1 10 GLU 10 69 69 GLU GLU C . n B 1 11 LYS 11 70 70 LYS LYS C . n B 1 12 SER 12 71 ? ? ? C . n B 1 13 GLU 13 72 ? ? ? C . n B 1 14 LEU 14 73 ? ? ? C . n B 1 15 LYS 15 74 ? ? ? C . n B 1 16 SER 16 75 ? ? ? C . n B 1 17 ALA 17 76 ? ? ? C . n B 1 18 GLU 18 77 ? ? ? C . n B 1 19 GLY 19 78 ? ? ? C . n B 1 20 SER 20 79 79 SER SER C . n B 1 21 THR 21 80 80 THR THR C . n B 1 22 TRP 22 81 81 TRP TRP C . n B 1 23 ASN 23 82 82 ASN ASN C . n B 1 24 CYS 24 83 83 CYS CYS C . n B 1 25 CYS 25 84 84 CYS CYS C . n B 1 26 PRO 26 85 85 PRO PRO C . n B 1 27 ILE 27 86 86 ILE ILE C . n B 1 28 ASP 28 87 87 ASP ASP C . n B 1 29 TRP 29 88 88 TRP TRP C . n B 1 30 ARG 30 89 89 ARG ARG C . n B 1 31 ALA 31 90 90 ALA ALA C . n B 1 32 PHE 32 91 91 PHE PHE C . n B 1 33 GLN 33 92 92 GLN GLN C . n B 1 34 SER 34 93 93 SER SER C . n B 1 35 ASN 35 94 94 ASN ASN C . n B 1 36 CYS 36 95 95 CYS CYS C . n B 1 37 TYR 37 96 96 TYR TYR C . n B 1 38 PHE 38 97 97 PHE PHE C . n B 1 39 PRO 39 98 98 PRO PRO C . n B 1 40 LEU 40 99 99 LEU LEU C . n B 1 41 THR 41 100 100 THR THR C . n B 1 42 ASP 42 101 101 ASP ASP C . n B 1 43 ASN 43 102 102 ASN ASN C . n B 1 44 LYS 44 103 103 LYS LYS C . n B 1 45 THR 45 104 104 THR THR C . n B 1 46 TRP 46 105 105 TRP TRP C . n B 1 47 ALA 47 106 106 ALA ALA C . n B 1 48 GLU 48 107 107 GLU GLU C . n B 1 49 SER 49 108 108 SER SER C . n B 1 50 GLU 50 109 109 GLU GLU C . n B 1 51 ARG 51 110 110 ARG ARG C . n B 1 52 ASN 52 111 111 ASN ASN C . n B 1 53 CYS 53 112 112 CYS CYS C . n B 1 54 SER 54 113 113 SER SER C . n B 1 55 GLY 55 114 114 GLY GLY C . n B 1 56 MET 56 115 115 MET MET C . n B 1 57 GLY 57 116 116 GLY GLY C . n B 1 58 ALA 58 117 117 ALA ALA C . n B 1 59 HIS 59 118 118 HIS HIS C . n B 1 60 LEU 60 119 119 LEU LEU C . n B 1 61 MET 61 120 120 MET MET C . n B 1 62 THR 62 121 121 THR THR C . n B 1 63 ILE 63 122 122 ILE ILE C . n B 1 64 SER 64 123 123 SER SER C . n B 1 65 THR 65 124 124 THR THR C . n B 1 66 GLU 66 125 125 GLU GLU C . n B 1 67 ALA 67 126 126 ALA ALA C . n B 1 68 GLU 68 127 127 GLU GLU C . n B 1 69 GLN 69 128 128 GLN GLN C . n B 1 70 ASN 70 129 129 ASN ASN C . n B 1 71 PHE 71 130 130 PHE PHE C . n B 1 72 ILE 72 131 131 ILE ILE C . n B 1 73 ILE 73 132 132 ILE ILE C . n B 1 74 GLN 74 133 133 GLN GLN C . n B 1 75 PHE 75 134 134 PHE PHE C . n B 1 76 LEU 76 135 135 LEU LEU C . n B 1 77 ASP 77 136 136 ASP ASP C . n B 1 78 ARG 78 137 137 ARG ARG C . n B 1 79 ARG 79 138 138 ARG ARG C . n B 1 80 LEU 80 139 139 LEU LEU C . n B 1 81 SER 81 140 140 SER SER C . n B 1 82 TYR 82 141 141 TYR TYR C . n B 1 83 PHE 83 142 142 PHE PHE C . n B 1 84 LEU 84 143 143 LEU LEU C . n B 1 85 GLY 85 144 144 GLY GLY C . n B 1 86 LEU 86 145 145 LEU LEU C . n B 1 87 ARG 87 146 146 ARG ARG C . n B 1 88 ASP 88 147 147 ASP ASP C . n B 1 89 GLU 89 148 148 GLU GLU C . n B 1 90 ASN 90 149 149 ASN ASN C . n B 1 91 ALA 91 150 150 ALA ALA C . n B 1 92 LYS 92 151 151 LYS LYS C . n B 1 93 GLY 93 152 152 GLY GLY C . n B 1 94 GLN 94 153 153 GLN GLN C . n B 1 95 TRP 95 154 154 TRP TRP C . n B 1 96 ARG 96 155 155 ARG ARG C . n B 1 97 TRP 97 156 156 TRP TRP C . n B 1 98 VAL 98 157 157 VAL VAL C . n B 1 99 ASP 99 158 158 ASP ASP C . n B 1 100 GLN 100 159 159 GLN GLN C . n B 1 101 THR 101 160 160 THR THR C . n B 1 102 PRO 102 161 161 PRO PRO C . n B 1 103 PHE 103 162 162 PHE PHE C . n B 1 104 ASN 104 163 163 ASN ASN C . n B 1 105 PRO 105 164 164 PRO PRO C . n B 1 106 ARG 106 165 165 ARG ARG C . n B 1 107 ARG 107 166 166 ARG ARG C . n B 1 108 VAL 108 167 167 VAL VAL C . n B 1 109 PHE 109 168 168 PHE PHE C . n B 1 110 TRP 110 169 169 TRP TRP C . n B 1 111 HIS 111 170 170 HIS HIS C . n B 1 112 LYS 112 171 171 LYS LYS C . n B 1 113 ASN 113 172 172 ASN ASN C . n B 1 114 GLU 114 173 173 GLU GLU C . n B 1 115 PRO 115 174 174 PRO PRO C . n B 1 116 ASP 116 175 175 ASP ASP C . n B 1 117 ASN 117 176 176 ASN ASN C . n B 1 118 SER 118 177 177 SER SER C . n B 1 119 GLN 119 178 178 GLN GLN C . n B 1 120 GLY 120 179 179 GLY GLY C . n B 1 121 GLU 121 180 180 GLU GLU C . n B 1 122 ASN 122 181 181 ASN ASN C . n B 1 123 CYS 123 182 182 CYS CYS C . n B 1 124 VAL 124 183 183 VAL VAL C . n B 1 125 VAL 125 184 184 VAL VAL C . n B 1 126 LEU 126 185 185 LEU LEU C . n B 1 127 VAL 127 186 186 VAL VAL C . n B 1 128 TYR 128 187 187 TYR TYR C . n B 1 129 ASN 129 188 188 ASN ASN C . n B 1 130 GLN 130 189 189 GLN GLN C . n B 1 131 ASP 131 190 190 ASP ASP C . n B 1 132 LYS 132 191 191 LYS LYS C . n B 1 133 TRP 133 192 192 TRP TRP C . n B 1 134 ALA 134 193 193 ALA ALA C . n B 1 135 TRP 135 194 194 TRP TRP C . n B 1 136 ASN 136 195 195 ASN ASN C . n B 1 137 ASP 137 196 196 ASP ASP C . n B 1 138 VAL 138 197 197 VAL VAL C . n B 1 139 PRO 139 198 198 PRO PRO C . n B 1 140 CYS 140 199 199 CYS CYS C . n B 1 141 ASN 141 200 200 ASN ASN C . n B 1 142 PHE 142 201 201 PHE PHE C . n B 1 143 GLU 143 202 202 GLU GLU C . n B 1 144 ALA 144 203 203 ALA ALA C . n B 1 145 SER 145 204 204 SER SER C . n B 1 146 ARG 146 205 205 ARG ARG C . n B 1 147 ILE 147 206 206 ILE ILE C . n B 1 148 CYS 148 207 207 CYS CYS C . n B 1 149 LYS 149 208 208 LYS LYS C . n B 1 150 ILE 150 209 209 ILE ILE C . n B 1 151 PRO 151 210 210 PRO PRO C . n B 1 152 GLY 152 211 211 GLY GLY C . n B 1 153 THR 153 212 212 THR THR C . n B 1 154 THR 154 213 213 THR THR C . n B 1 155 LEU 155 214 214 LEU LEU C . n B 1 156 ASN 156 215 215 ASN ASN C . n # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_defined_assembly ? monomeric 1 2 author_defined_assembly ? monomeric 1 3 software_defined_assembly PISA dimeric 2 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,C,E 2 1 B,D,F 3 1 A,B,C,D,E,F # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 3 'ABSA (A^2)' 1160 ? 3 MORE -11 ? 3 'SSA (A^2)' 16130 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OD1 ? A ASN 136 ? A ASN 195 ? 1_555 CA ? C CA . ? A CA 501 ? 1_555 OD1 ? A ASP 137 ? A ASP 196 ? 1_555 97.8 ? 2 OD1 ? A ASN 136 ? A ASN 195 ? 1_555 CA ? C CA . ? A CA 501 ? 1_555 OE1 ? A GLU 114 ? A GLU 173 ? 1_555 74.3 ? 3 OD1 ? A ASP 137 ? A ASP 196 ? 1_555 CA ? C CA . ? A CA 501 ? 1_555 OE1 ? A GLU 114 ? A GLU 173 ? 1_555 71.4 ? 4 OD1 ? A ASN 136 ? A ASN 195 ? 1_555 CA ? C CA . ? A CA 501 ? 1_555 OD1 ? A ASP 116 ? A ASP 175 ? 1_555 149.2 ? 5 OD1 ? A ASP 137 ? A ASP 196 ? 1_555 CA ? C CA . ? A CA 501 ? 1_555 OD1 ? A ASP 116 ? A ASP 175 ? 1_555 79.6 ? 6 OE1 ? A GLU 114 ? A GLU 173 ? 1_555 CA ? C CA . ? A CA 501 ? 1_555 OD1 ? A ASP 116 ? A ASP 175 ? 1_555 75.8 ? 7 OD1 ? A ASN 136 ? A ASN 195 ? 1_555 CA ? C CA . ? A CA 501 ? 1_555 O ? A ASP 137 ? A ASP 196 ? 1_555 75.2 ? 8 OD1 ? A ASP 137 ? A ASP 196 ? 1_555 CA ? C CA . ? A CA 501 ? 1_555 O ? A ASP 137 ? A ASP 196 ? 1_555 73.4 ? 9 OE1 ? A GLU 114 ? A GLU 173 ? 1_555 CA ? C CA . ? A CA 501 ? 1_555 O ? A ASP 137 ? A ASP 196 ? 1_555 128.9 ? 10 OD1 ? A ASP 116 ? A ASP 175 ? 1_555 CA ? C CA . ? A CA 501 ? 1_555 O ? A ASP 137 ? A ASP 196 ? 1_555 131.5 ? 11 OD1 ? A ASN 136 ? A ASN 195 ? 1_555 CA ? C CA . ? A CA 501 ? 1_555 O ? E HOH . ? A HOH 680 ? 1_555 122.8 ? 12 OD1 ? A ASP 137 ? A ASP 196 ? 1_555 CA ? C CA . ? A CA 501 ? 1_555 O ? E HOH . ? A HOH 680 ? 1_555 119.9 ? 13 OE1 ? A GLU 114 ? A GLU 173 ? 1_555 CA ? C CA . ? A CA 501 ? 1_555 O ? E HOH . ? A HOH 680 ? 1_555 154.1 ? 14 OD1 ? A ASP 116 ? A ASP 175 ? 1_555 CA ? C CA . ? A CA 501 ? 1_555 O ? E HOH . ? A HOH 680 ? 1_555 83.3 ? 15 O ? A ASP 137 ? A ASP 196 ? 1_555 CA ? C CA . ? A CA 501 ? 1_555 O ? E HOH . ? A HOH 680 ? 1_555 76.7 ? 16 OD1 ? A ASN 136 ? A ASN 195 ? 1_555 CA ? C CA . ? A CA 501 ? 1_555 O ? E HOH . ? A HOH 687 ? 1_555 80.5 ? 17 OD1 ? A ASP 137 ? A ASP 196 ? 1_555 CA ? C CA . ? A CA 501 ? 1_555 O ? E HOH . ? A HOH 687 ? 1_555 154.3 ? 18 OE1 ? A GLU 114 ? A GLU 173 ? 1_555 CA ? C CA . ? A CA 501 ? 1_555 O ? E HOH . ? A HOH 687 ? 1_555 83.5 ? 19 OD1 ? A ASP 116 ? A ASP 175 ? 1_555 CA ? C CA . ? A CA 501 ? 1_555 O ? E HOH . ? A HOH 687 ? 1_555 88.8 ? 20 O ? A ASP 137 ? A ASP 196 ? 1_555 CA ? C CA . ? A CA 501 ? 1_555 O ? E HOH . ? A HOH 687 ? 1_555 129.7 ? 21 O ? E HOH . ? A HOH 680 ? 1_555 CA ? C CA . ? A CA 501 ? 1_555 O ? E HOH . ? A HOH 687 ? 1_555 80.9 ? 22 O ? B ASP 137 ? C ASP 196 ? 1_555 CA ? D CA . ? C CA 501 ? 1_555 OE1 ? B GLU 114 ? C GLU 173 ? 1_555 122.3 ? 23 O ? B ASP 137 ? C ASP 196 ? 1_555 CA ? D CA . ? C CA 501 ? 1_555 OD1 ? B ASP 137 ? C ASP 196 ? 1_555 70.6 ? 24 OE1 ? B GLU 114 ? C GLU 173 ? 1_555 CA ? D CA . ? C CA 501 ? 1_555 OD1 ? B ASP 137 ? C ASP 196 ? 1_555 75.0 ? 25 O ? B ASP 137 ? C ASP 196 ? 1_555 CA ? D CA . ? C CA 501 ? 1_555 OD1 ? B ASP 116 ? C ASP 175 ? 1_555 139.5 ? 26 OE1 ? B GLU 114 ? C GLU 173 ? 1_555 CA ? D CA . ? C CA 501 ? 1_555 OD1 ? B ASP 116 ? C ASP 175 ? 1_555 77.5 ? 27 OD1 ? B ASP 137 ? C ASP 196 ? 1_555 CA ? D CA . ? C CA 501 ? 1_555 OD1 ? B ASP 116 ? C ASP 175 ? 1_555 83.5 ? 28 O ? B ASP 137 ? C ASP 196 ? 1_555 CA ? D CA . ? C CA 501 ? 1_555 OD1 ? B ASN 136 ? C ASN 195 ? 1_555 75.1 ? 29 OE1 ? B GLU 114 ? C GLU 173 ? 1_555 CA ? D CA . ? C CA 501 ? 1_555 OD1 ? B ASN 136 ? C ASN 195 ? 1_555 73.1 ? 30 OD1 ? B ASP 137 ? C ASP 196 ? 1_555 CA ? D CA . ? C CA 501 ? 1_555 OD1 ? B ASN 136 ? C ASN 195 ? 1_555 107.8 ? 31 OD1 ? B ASP 116 ? C ASP 175 ? 1_555 CA ? D CA . ? C CA 501 ? 1_555 OD1 ? B ASN 136 ? C ASN 195 ? 1_555 144.1 ? 32 O ? B ASP 137 ? C ASP 196 ? 1_555 CA ? D CA . ? C CA 501 ? 1_555 O ? F HOH . ? C HOH 693 ? 1_555 124.5 ? 33 OE1 ? B GLU 114 ? C GLU 173 ? 1_555 CA ? D CA . ? C CA 501 ? 1_555 O ? F HOH . ? C HOH 693 ? 1_555 93.0 ? 34 OD1 ? B ASP 137 ? C ASP 196 ? 1_555 CA ? D CA . ? C CA 501 ? 1_555 O ? F HOH . ? C HOH 693 ? 1_555 164.7 ? 35 OD1 ? B ASP 116 ? C ASP 175 ? 1_555 CA ? D CA . ? C CA 501 ? 1_555 O ? F HOH . ? C HOH 693 ? 1_555 84.7 ? 36 OD1 ? B ASN 136 ? C ASN 195 ? 1_555 CA ? D CA . ? C CA 501 ? 1_555 O ? F HOH . ? C HOH 693 ? 1_555 76.9 ? 37 O ? B ASP 137 ? C ASP 196 ? 1_555 CA ? D CA . ? C CA 501 ? 1_555 O ? F HOH . ? C HOH 624 ? 1_555 80.9 ? 38 OE1 ? B GLU 114 ? C GLU 173 ? 1_555 CA ? D CA . ? C CA 501 ? 1_555 O ? F HOH . ? C HOH 624 ? 1_555 154.1 ? 39 OD1 ? B ASP 137 ? C ASP 196 ? 1_555 CA ? D CA . ? C CA 501 ? 1_555 O ? F HOH . ? C HOH 624 ? 1_555 106.2 ? 40 OD1 ? B ASP 116 ? C ASP 175 ? 1_555 CA ? D CA . ? C CA 501 ? 1_555 O ? F HOH . ? C HOH 624 ? 1_555 77.0 ? 41 OD1 ? B ASN 136 ? C ASN 195 ? 1_555 CA ? D CA . ? C CA 501 ? 1_555 O ? F HOH . ? C HOH 624 ? 1_555 128.3 ? 42 O ? F HOH . ? C HOH 693 ? 1_555 CA ? D CA . ? C CA 501 ? 1_555 O ? F HOH . ? C HOH 624 ? 1_555 80.3 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2013-10-23 2 'Structure model' 1 1 2013-12-11 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # _pdbx_audit_revision_group.ordinal 1 _pdbx_audit_revision_group.revision_ordinal 2 _pdbx_audit_revision_group.data_content_type 'Structure model' _pdbx_audit_revision_group.group 'Database references' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal HKL-2000 'data collection' . ? 1 MOLREP phasing . ? 2 PHENIX refinement '(phenix.refine: 1.8.2_1309)' ? 3 HKL-2000 'data reduction' . ? 4 HKL-2000 'data scaling' . ? 5 # loop_ _pdbx_validate_symm_contact.id _pdbx_validate_symm_contact.PDB_model_num _pdbx_validate_symm_contact.auth_atom_id_1 _pdbx_validate_symm_contact.auth_asym_id_1 _pdbx_validate_symm_contact.auth_comp_id_1 _pdbx_validate_symm_contact.auth_seq_id_1 _pdbx_validate_symm_contact.PDB_ins_code_1 _pdbx_validate_symm_contact.label_alt_id_1 _pdbx_validate_symm_contact.site_symmetry_1 _pdbx_validate_symm_contact.auth_atom_id_2 _pdbx_validate_symm_contact.auth_asym_id_2 _pdbx_validate_symm_contact.auth_comp_id_2 _pdbx_validate_symm_contact.auth_seq_id_2 _pdbx_validate_symm_contact.PDB_ins_code_2 _pdbx_validate_symm_contact.label_alt_id_2 _pdbx_validate_symm_contact.site_symmetry_2 _pdbx_validate_symm_contact.dist 1 1 O C HOH 635 ? ? 1_555 O C HOH 672 ? ? 3_554 2.14 2 1 OE1 C GLN 178 ? ? 1_555 O A HOH 632 ? ? 4_544 2.14 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASN C 172 ? ? 76.88 -8.28 2 1 ASP C 175 ? ? -152.41 12.34 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 60 ? A MET 1 2 1 Y 1 A GLU 69 ? A GLU 10 3 1 Y 1 A LYS 70 ? A LYS 11 4 1 Y 1 A SER 71 ? A SER 12 5 1 Y 1 A GLU 72 ? A GLU 13 6 1 Y 1 A LEU 73 ? A LEU 14 7 1 Y 1 A LYS 74 ? A LYS 15 8 1 Y 1 A SER 75 ? A SER 16 9 1 Y 1 A ALA 76 ? A ALA 17 10 1 Y 1 A GLU 77 ? A GLU 18 11 1 Y 1 A GLY 78 ? A GLY 19 12 1 Y 1 C SER 71 ? B SER 12 13 1 Y 1 C GLU 72 ? B GLU 13 14 1 Y 1 C LEU 73 ? B LEU 14 15 1 Y 1 C LYS 74 ? B LYS 15 16 1 Y 1 C SER 75 ? B SER 16 17 1 Y 1 C ALA 76 ? B ALA 17 18 1 Y 1 C GLU 77 ? B GLU 18 19 1 Y 1 C GLY 78 ? B GLY 19 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'CALCIUM ION' CA 3 water HOH # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 CA 1 501 501 CA CA A . D 2 CA 1 501 501 CA CA C . E 3 HOH 1 601 3 HOH HOH A . E 3 HOH 2 602 5 HOH HOH A . E 3 HOH 3 603 7 HOH HOH A . E 3 HOH 4 604 12 HOH HOH A . E 3 HOH 5 605 16 HOH HOH A . E 3 HOH 6 606 17 HOH HOH A . E 3 HOH 7 607 21 HOH HOH A . E 3 HOH 8 608 22 HOH HOH A . E 3 HOH 9 609 26 HOH HOH A . E 3 HOH 10 610 31 HOH HOH A . E 3 HOH 11 611 32 HOH HOH A . E 3 HOH 12 612 34 HOH HOH A . E 3 HOH 13 613 41 HOH HOH A . E 3 HOH 14 614 46 HOH HOH A . E 3 HOH 15 615 49 HOH HOH A . E 3 HOH 16 616 54 HOH HOH A . E 3 HOH 17 617 55 HOH HOH A . E 3 HOH 18 618 57 HOH HOH A . E 3 HOH 19 619 58 HOH HOH A . E 3 HOH 20 620 59 HOH HOH A . E 3 HOH 21 621 64 HOH HOH A . E 3 HOH 22 622 65 HOH HOH A . E 3 HOH 23 623 66 HOH HOH A . E 3 HOH 24 624 67 HOH HOH A . E 3 HOH 25 625 69 HOH HOH A . E 3 HOH 26 626 71 HOH HOH A . E 3 HOH 27 627 75 HOH HOH A . E 3 HOH 28 628 76 HOH HOH A . E 3 HOH 29 629 78 HOH HOH A . E 3 HOH 30 630 79 HOH HOH A . E 3 HOH 31 631 83 HOH HOH A . E 3 HOH 32 632 86 HOH HOH A . E 3 HOH 33 633 89 HOH HOH A . E 3 HOH 34 634 91 HOH HOH A . E 3 HOH 35 635 92 HOH HOH A . E 3 HOH 36 636 93 HOH HOH A . E 3 HOH 37 637 94 HOH HOH A . E 3 HOH 38 638 97 HOH HOH A . E 3 HOH 39 639 101 HOH HOH A . E 3 HOH 40 640 102 HOH HOH A . E 3 HOH 41 641 105 HOH HOH A . E 3 HOH 42 642 107 HOH HOH A . E 3 HOH 43 643 108 HOH HOH A . E 3 HOH 44 644 109 HOH HOH A . E 3 HOH 45 645 110 HOH HOH A . E 3 HOH 46 646 111 HOH HOH A . E 3 HOH 47 647 112 HOH HOH A . E 3 HOH 48 648 113 HOH HOH A . E 3 HOH 49 649 114 HOH HOH A . E 3 HOH 50 650 115 HOH HOH A . E 3 HOH 51 651 117 HOH HOH A . E 3 HOH 52 652 118 HOH HOH A . E 3 HOH 53 653 119 HOH HOH A . E 3 HOH 54 654 120 HOH HOH A . E 3 HOH 55 655 121 HOH HOH A . E 3 HOH 56 656 123 HOH HOH A . E 3 HOH 57 657 125 HOH HOH A . E 3 HOH 58 658 126 HOH HOH A . E 3 HOH 59 659 127 HOH HOH A . E 3 HOH 60 660 129 HOH HOH A . E 3 HOH 61 661 131 HOH HOH A . E 3 HOH 62 662 132 HOH HOH A . E 3 HOH 63 663 134 HOH HOH A . E 3 HOH 64 664 135 HOH HOH A . E 3 HOH 65 665 136 HOH HOH A . E 3 HOH 66 666 137 HOH HOH A . E 3 HOH 67 667 138 HOH HOH A . E 3 HOH 68 668 139 HOH HOH A . E 3 HOH 69 669 143 HOH HOH A . E 3 HOH 70 670 145 HOH HOH A . E 3 HOH 71 671 150 HOH HOH A . E 3 HOH 72 672 152 HOH HOH A . E 3 HOH 73 673 153 HOH HOH A . E 3 HOH 74 674 154 HOH HOH A . E 3 HOH 75 675 155 HOH HOH A . E 3 HOH 76 676 157 HOH HOH A . E 3 HOH 77 677 158 HOH HOH A . E 3 HOH 78 678 159 HOH HOH A . E 3 HOH 79 679 160 HOH HOH A . E 3 HOH 80 680 161 HOH HOH A . E 3 HOH 81 681 163 HOH HOH A . E 3 HOH 82 682 165 HOH HOH A . E 3 HOH 83 683 166 HOH HOH A . E 3 HOH 84 684 167 HOH HOH A . E 3 HOH 85 685 169 HOH HOH A . E 3 HOH 86 686 170 HOH HOH A . E 3 HOH 87 687 172 HOH HOH A . E 3 HOH 88 688 173 HOH HOH A . E 3 HOH 89 689 176 HOH HOH A . E 3 HOH 90 690 177 HOH HOH A . E 3 HOH 91 691 178 HOH HOH A . E 3 HOH 92 692 181 HOH HOH A . E 3 HOH 93 693 183 HOH HOH A . E 3 HOH 94 694 184 HOH HOH A . E 3 HOH 95 695 186 HOH HOH A . E 3 HOH 96 696 190 HOH HOH A . E 3 HOH 97 697 191 HOH HOH A . E 3 HOH 98 698 192 HOH HOH A . E 3 HOH 99 699 193 HOH HOH A . E 3 HOH 100 700 197 HOH HOH A . E 3 HOH 101 701 201 HOH HOH A . E 3 HOH 102 702 202 HOH HOH A . E 3 HOH 103 703 203 HOH HOH A . E 3 HOH 104 704 204 HOH HOH A . E 3 HOH 105 705 205 HOH HOH A . E 3 HOH 106 706 206 HOH HOH A . E 3 HOH 107 707 208 HOH HOH A . E 3 HOH 108 708 209 HOH HOH A . E 3 HOH 109 709 211 HOH HOH A . E 3 HOH 110 710 214 HOH HOH A . E 3 HOH 111 711 216 HOH HOH A . E 3 HOH 112 712 217 HOH HOH A . E 3 HOH 113 713 219 HOH HOH A . E 3 HOH 114 714 222 HOH HOH A . E 3 HOH 115 715 223 HOH HOH A . E 3 HOH 116 716 224 HOH HOH A . E 3 HOH 117 717 225 HOH HOH A . E 3 HOH 118 718 227 HOH HOH A . E 3 HOH 119 719 230 HOH HOH A . E 3 HOH 120 720 232 HOH HOH A . F 3 HOH 1 601 1 HOH HOH C . F 3 HOH 2 602 2 HOH HOH C . F 3 HOH 3 603 4 HOH HOH C . F 3 HOH 4 604 6 HOH HOH C . F 3 HOH 5 605 8 HOH HOH C . F 3 HOH 6 606 9 HOH HOH C . F 3 HOH 7 607 10 HOH HOH C . F 3 HOH 8 608 11 HOH HOH C . F 3 HOH 9 609 13 HOH HOH C . F 3 HOH 10 610 14 HOH HOH C . F 3 HOH 11 611 15 HOH HOH C . F 3 HOH 12 612 18 HOH HOH C . F 3 HOH 13 613 19 HOH HOH C . F 3 HOH 14 614 20 HOH HOH C . F 3 HOH 15 615 23 HOH HOH C . F 3 HOH 16 616 24 HOH HOH C . F 3 HOH 17 617 25 HOH HOH C . F 3 HOH 18 618 27 HOH HOH C . F 3 HOH 19 619 28 HOH HOH C . F 3 HOH 20 620 29 HOH HOH C . F 3 HOH 21 621 30 HOH HOH C . F 3 HOH 22 622 33 HOH HOH C . F 3 HOH 23 623 35 HOH HOH C . F 3 HOH 24 624 36 HOH HOH C . F 3 HOH 25 625 37 HOH HOH C . F 3 HOH 26 626 38 HOH HOH C . F 3 HOH 27 627 39 HOH HOH C . F 3 HOH 28 628 40 HOH HOH C . F 3 HOH 29 629 42 HOH HOH C . F 3 HOH 30 630 43 HOH HOH C . F 3 HOH 31 631 44 HOH HOH C . F 3 HOH 32 632 45 HOH HOH C . F 3 HOH 33 633 47 HOH HOH C . F 3 HOH 34 634 48 HOH HOH C . F 3 HOH 35 635 50 HOH HOH C . F 3 HOH 36 636 51 HOH HOH C . F 3 HOH 37 637 52 HOH HOH C . F 3 HOH 38 638 53 HOH HOH C . F 3 HOH 39 639 56 HOH HOH C . F 3 HOH 40 640 60 HOH HOH C . F 3 HOH 41 641 61 HOH HOH C . F 3 HOH 42 642 62 HOH HOH C . F 3 HOH 43 643 63 HOH HOH C . F 3 HOH 44 644 68 HOH HOH C . F 3 HOH 45 645 70 HOH HOH C . F 3 HOH 46 646 72 HOH HOH C . F 3 HOH 47 647 73 HOH HOH C . F 3 HOH 48 648 74 HOH HOH C . F 3 HOH 49 649 77 HOH HOH C . F 3 HOH 50 650 80 HOH HOH C . F 3 HOH 51 651 81 HOH HOH C . F 3 HOH 52 652 82 HOH HOH C . F 3 HOH 53 653 84 HOH HOH C . F 3 HOH 54 654 85 HOH HOH C . F 3 HOH 55 655 87 HOH HOH C . F 3 HOH 56 656 88 HOH HOH C . F 3 HOH 57 657 90 HOH HOH C . F 3 HOH 58 658 95 HOH HOH C . F 3 HOH 59 659 96 HOH HOH C . F 3 HOH 60 660 98 HOH HOH C . F 3 HOH 61 661 99 HOH HOH C . F 3 HOH 62 662 100 HOH HOH C . F 3 HOH 63 663 103 HOH HOH C . F 3 HOH 64 664 104 HOH HOH C . F 3 HOH 65 665 106 HOH HOH C . F 3 HOH 66 666 116 HOH HOH C . F 3 HOH 67 667 122 HOH HOH C . F 3 HOH 68 668 124 HOH HOH C . F 3 HOH 69 669 128 HOH HOH C . F 3 HOH 70 670 133 HOH HOH C . F 3 HOH 71 671 140 HOH HOH C . F 3 HOH 72 672 141 HOH HOH C . F 3 HOH 73 673 142 HOH HOH C . F 3 HOH 74 674 144 HOH HOH C . F 3 HOH 75 675 146 HOH HOH C . F 3 HOH 76 676 147 HOH HOH C . F 3 HOH 77 677 148 HOH HOH C . F 3 HOH 78 678 149 HOH HOH C . F 3 HOH 79 679 151 HOH HOH C . F 3 HOH 80 680 156 HOH HOH C . F 3 HOH 81 681 162 HOH HOH C . F 3 HOH 82 682 164 HOH HOH C . F 3 HOH 83 683 168 HOH HOH C . F 3 HOH 84 684 171 HOH HOH C . F 3 HOH 85 685 174 HOH HOH C . F 3 HOH 86 686 175 HOH HOH C . F 3 HOH 87 687 179 HOH HOH C . F 3 HOH 88 688 180 HOH HOH C . F 3 HOH 89 689 182 HOH HOH C . F 3 HOH 90 690 185 HOH HOH C . F 3 HOH 91 691 187 HOH HOH C . F 3 HOH 92 692 188 HOH HOH C . F 3 HOH 93 693 189 HOH HOH C . F 3 HOH 94 694 194 HOH HOH C . F 3 HOH 95 695 195 HOH HOH C . F 3 HOH 96 696 196 HOH HOH C . F 3 HOH 97 697 198 HOH HOH C . F 3 HOH 98 698 199 HOH HOH C . F 3 HOH 99 699 200 HOH HOH C . F 3 HOH 100 700 207 HOH HOH C . F 3 HOH 101 701 210 HOH HOH C . F 3 HOH 102 702 212 HOH HOH C . F 3 HOH 103 703 213 HOH HOH C . F 3 HOH 104 704 215 HOH HOH C . F 3 HOH 105 705 218 HOH HOH C . F 3 HOH 106 706 220 HOH HOH C . F 3 HOH 107 707 221 HOH HOH C . F 3 HOH 108 708 226 HOH HOH C . F 3 HOH 109 709 228 HOH HOH C . F 3 HOH 110 710 229 HOH HOH C . F 3 HOH 111 711 231 HOH HOH C . #