HEADER OXIDOREDUCTASE 29-OCT-13 3WKO OBSLTE 20-MAY-15 3WKO 4ZK8 TITLE COPPER-CONTAINING NITRITE REDUCTASE FROM THERMOPHILIC BACTERIUM TITLE 2 GEOBACILLUS THERMODENITRIFICANS COMPND MOL_ID: 1; COMPND 2 MOLECULE: NITRITE REDUCTASE; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 31-352; COMPND 5 SYNONYM: COPPER-CONTAINING NITRITE REDUCTASE; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: GEOBACILLUS THERMODENITRIFICANS; SOURCE 3 ORGANISM_TAXID: 420246; SOURCE 4 STRAIN: NG80-2; SOURCE 5 GENE: NIRK; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21 (DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET22B KEYWDS GREEK KEY BETA BARREL, NITRITE REDUCTASE, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR Y.FUKUDA,T.INOUE REVDAT 2 20-MAY-15 3WKO 1 OBSLTE REVDAT 1 11-DEC-13 3WKO 0 JRNL AUTH Y.FUKUDA,T.INOUE JRNL TITL COPPER-CONTAINING NITRITE REDUCTASE FROM THERMOPHILIC JRNL TITL 2 BACTERIUM GEOBACILLUS THERMODENITRIFICANS JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.15 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.6.0117 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.15 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 22.06 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 95.6 REMARK 3 NUMBER OF REFLECTIONS : 134511 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.133 REMARK 3 R VALUE (WORKING SET) : 0.131 REMARK 3 FREE R VALUE : 0.163 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 7102 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.15 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.18 REMARK 3 REFLECTION IN BIN (WORKING SET) : 9409 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 90.41 REMARK 3 BIN R VALUE (WORKING SET) : 0.2370 REMARK 3 BIN FREE R VALUE SET COUNT : 514 REMARK 3 BIN FREE R VALUE : 0.2790 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2286 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 78 REMARK 3 SOLVENT ATOMS : 382 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 15.26 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.04000 REMARK 3 B22 (A**2) : -0.04000 REMARK 3 B33 (A**2) : 0.07000 REMARK 3 B12 (A**2) : -0.02000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.026 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.029 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.023 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.155 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.980 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.972 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2656 ; 0.029 ; 0.020 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3641 ; 2.499 ; 1.960 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 348 ; 7.987 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 114 ;44.270 ;25.614 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 423 ;12.234 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 4 ; 6.067 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 390 ; 0.165 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2089 ; 0.017 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): 2656 ; 9.945 ; 3.000 REMARK 3 SPHERICITY; FREE ATOMS (A**2): 144 ;37.978 ; 5.000 REMARK 3 SPHERICITY; BONDED ATOMS (A**2): 2876 ;16.818 ; 5.000 REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN USED IF PRESENT IN REMARK 3 THE INPUT REMARK 4 REMARK 4 3WKO COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 31-OCT-13. REMARK 100 THE RCSB ID CODE IS RCSB096455. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 25-JAN-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SPRING-8 REMARK 200 BEAMLINE : BL44XU REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX225HE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 141618 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.150 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.7 REMARK 200 DATA REDUNDANCY : 2.600 REMARK 200 R MERGE (I) : 0.07300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.15 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.18 REMARK 200 COMPLETENESS FOR SHELL (%) : 91.7 REMARK 200 DATA REDUNDANCY IN SHELL : 2.10 REMARK 200 R MERGE FOR SHELL (I) : 0.28500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 59.37 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.03 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 5.5% PEG 4000, 0.1M SODIUM ACETATE, REMARK 280 0.075M COPPER SULPHATE, PH 4.5, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: H 3 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 X+2/3,Y+1/3,Z+1/3 REMARK 290 5555 -Y+2/3,X-Y+1/3,Z+1/3 REMARK 290 6555 -X+Y+2/3,-X+1/3,Z+1/3 REMARK 290 7555 X+1/3,Y+2/3,Z+2/3 REMARK 290 8555 -Y+1/3,X-Y+2/3,Z+2/3 REMARK 290 9555 -X+Y+1/3,-X+2/3,Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 57.52700 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 33.21323 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 28.13900 REMARK 290 SMTRY1 5 -0.500000 -0.866025 0.000000 57.52700 REMARK 290 SMTRY2 5 0.866025 -0.500000 0.000000 33.21323 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 28.13900 REMARK 290 SMTRY1 6 -0.500000 0.866025 0.000000 57.52700 REMARK 290 SMTRY2 6 -0.866025 -0.500000 0.000000 33.21323 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 28.13900 REMARK 290 SMTRY1 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 66.42646 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 56.27800 REMARK 290 SMTRY1 8 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 8 0.866025 -0.500000 0.000000 66.42646 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 56.27800 REMARK 290 SMTRY1 9 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 -0.500000 0.000000 66.42646 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 56.27800 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 19980 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 29020 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -493.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 863 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 594 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 GLU A 2 REMARK 465 SER A 3 REMARK 465 LYS A 4 REMARK 465 ASN A 5 REMARK 465 LYS A 6 REMARK 465 THR A 7 REMARK 465 ALA A 8 REMARK 465 ALA A 9 REMARK 465 THR A 10 REMARK 465 GLN A 11 REMARK 465 GLN A 12 REMARK 465 SER A 13 REMARK 465 GLU A 14 REMARK 465 PRO A 15 REMARK 465 ASN A 16 REMARK 465 VAL A 17 REMARK 465 THR A 312 REMARK 465 GLY A 313 REMARK 465 GLU A 314 REMARK 465 ASP A 315 REMARK 465 ASP A 316 REMARK 465 GLY A 317 REMARK 465 THR A 318 REMARK 465 GLU A 319 REMARK 465 THR A 320 REMARK 465 SER A 321 REMARK 465 GLY A 322 REMARK 465 HIS A 323 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 ALA A 19 CB REMARK 480 LYS A 22 CE NZ REMARK 480 LYS A 32 CE NZ REMARK 480 LYS A 56 CD NZ REMARK 480 LYS A 58 CD CE REMARK 480 LYS A 138 NZ REMARK 480 LYS A 157 NZ REMARK 480 LYS A 164 CG CD CE NZ REMARK 480 LYS A 218 CE NZ REMARK 480 LYS A 223 CE NZ REMARK 480 LYS A 308 CE NZ REMARK 480 GLU A 311 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 HIS A 21 CG HIS A 21 CD2 0.057 REMARK 500 LYS A 22 CD LYS A 22 CE 0.212 REMARK 500 HIS A 39 CG HIS A 39 CD2 0.057 REMARK 500 HIS A 262 NE2 HIS A 262 CD2 -0.068 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 MET A 33 CG - SD - CE ANGL. DEV. = 10.1 DEGREES REMARK 500 ASP A 51 CB - CG - OD1 ANGL. DEV. = 6.4 DEGREES REMARK 500 ASP A 55 CB - CG - OD2 ANGL. DEV. = 5.6 DEGREES REMARK 500 ASP A 98 CB - CG - OD1 ANGL. DEV. = 5.4 DEGREES REMARK 500 LYS A 138 CD - CE - NZ ANGL. DEV. = 24.1 DEGREES REMARK 500 TYR A 178 CD1 - CE1 - CZ ANGL. DEV. = -6.0 DEGREES REMARK 500 TYR A 180 CB - CG - CD1 ANGL. DEV. = -4.2 DEGREES REMARK 500 ASP A 182 CB - CG - OD1 ANGL. DEV. = 6.8 DEGREES REMARK 500 ARG A 229 NE - CZ - NH2 ANGL. DEV. = -4.6 DEGREES REMARK 500 ASP A 251 CB - CG - OD1 ANGL. DEV. = 5.9 DEGREES REMARK 500 ARG A 285 NE - CZ - NH2 ANGL. DEV. = -5.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 70 164.74 -49.86 REMARK 500 SER A 242 79.58 -115.29 REMARK 500 SER A 274 -1.09 79.22 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 VAL A 292 THR A 293 145.71 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 837 DISTANCE = 7.21 ANGSTROMS REMARK 615 REMARK 615 ZERO OCCUPANCY ATOM REMARK 615 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 615 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 615 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 615 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 615 M RES C SSEQI REMARK 615 MPD A 421 REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU A 407 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 713 O REMARK 620 2 HOH A 846 O 164.6 REMARK 620 3 HOH A 767 O 108.0 56.7 REMARK 620 4 ASP A 251 OD1 79.9 86.7 42.4 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU A 415 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 780 O REMARK 620 2 GLU A 78 OE2 84.8 REMARK 620 3 HOH A 770 O 92.4 170.4 REMARK 620 4 HOH A 738 O 167.5 89.4 91.4 REMARK 620 5 HOH A 630 O 97.0 91.9 97.6 94.2 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU A 408 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 773 O REMARK 620 2 ASP A 55 OD2 90.2 REMARK 620 3 HOH A 735 O 91.9 167.7 REMARK 620 4 ASP A 55 OD1 66.2 42.8 147.7 REMARK 620 5 HOH A 667 O 169.2 91.8 88.4 108.7 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU A 405 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ACY A 429 O REMARK 620 2 HOH A 796 O 81.5 REMARK 620 3 GLU A 169 OE2 93.6 169.3 REMARK 620 4 HOH A 771 O 107.9 91.7 98.9 REMARK 620 5 MPD A 420 O4 151.9 75.7 105.8 89.1 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU A 404 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 765 O REMARK 620 2 GLU A 226 OE1 95.4 REMARK 620 3 HOH A 710 O 170.7 93.9 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU A 410 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 850 O REMARK 620 2 HOH A 763 O 81.4 REMARK 620 3 ASP A 167 OD1 122.0 88.8 REMARK 620 4 HOH A 761 O 93.2 171.3 88.4 REMARK 620 5 ASP A 167 OD2 165.4 89.1 46.3 94.8 REMARK 620 6 HOH A 762 O 98.6 95.1 139.3 92.4 93.2 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU A 417 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 726 O REMARK 620 2 HOH A 806 O 89.2 REMARK 620 3 HOH A 581 O 105.0 164.9 REMARK 620 4 GLU A 239 OE1 133.1 59.8 111.2 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU A 413 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 799 O REMARK 620 2 HOH A 792 O 82.5 REMARK 620 3 ASP A 182 OD2 148.5 108.3 REMARK 620 4 HOH A 791 O 73.6 134.5 78.4 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU A 402 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 100 NE2 REMARK 620 2 HIS A 134 NE2 109.7 REMARK 620 3 CL A 418 CL 141.2 101.4 REMARK 620 4 HOH A 778 O 95.8 101.9 54.5 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU A 412 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 774 O REMARK 620 2 HIS A 298 NE2 82.7 REMARK 620 3 HOH A 798 O 160.3 79.8 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU A 406 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 40 OD1 REMARK 620 2 ASP A 40 OD2 61.7 REMARK 620 3 CU A 416 CU 135.9 121.1 REMARK 620 4 HOH A 653 O 89.0 66.9 60.0 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU A 403 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 83 ND1 REMARK 620 2 HIS A 42 NE2 98.8 REMARK 620 3 HOH A 559 O 103.5 95.3 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU A 409 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 39 NE2 REMARK 620 2 HOH A 858 O 102.5 REMARK 620 3 HOH A 857 O 87.1 81.2 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU A 401 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 143 ND1 REMARK 620 2 HIS A 95 ND1 100.4 REMARK 620 3 CYS A 135 SG 105.0 138.9 REMARK 620 4 MET A 148 SD 116.5 81.7 113.6 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CU A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CU A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CU A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CU A 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CU A 405 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CU A 406 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CU A 407 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CU A 408 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CU A 409 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CU A 410 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CU A 411 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CU A 412 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CU A 413 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CU A 414 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CU A 415 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CU A 416 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CU A 417 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 418 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MPD A 420 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MPD A 421 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MPD A 422 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PEG A 423 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 424 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 425 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 426 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 427 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 428 REMARK 800 REMARK 800 SITE_IDENTIFIER: DC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACY A 429 REMARK 800 REMARK 800 SITE_IDENTIFIER: DC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE OXY A 430 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3WKP RELATED DB: PDB REMARK 900 RELATED ID: 3WKQ RELATED DB: PDB DBREF 3WKO A 2 323 UNP A4IL26 A4IL26_GEOTN 31 352 SEQADV 3WKO MET A 1 UNP A4IL26 EXPRESSION TAG SEQRES 1 A 323 MET GLU SER LYS ASN LYS THR ALA ALA THR GLN GLN SER SEQRES 2 A 323 GLU PRO ASN VAL ILE ALA ALA HIS LYS GLY VAL ASN GLN SEQRES 3 A 323 ALA PRO VAL PRO LEU LYS MET GLU ARG VAL GLY PRO HIS SEQRES 4 A 323 ASP VAL HIS ILE GLU MET THR ALA GLN ILE THR ASP ILE SEQRES 5 A 323 GLU ILE ASP LYS GLY LYS ILE TYR LYS ALA TRP THR PHE SEQRES 6 A 323 ASN GLY GLN ALA PRO GLY PRO LEU VAL VAL VAL ASN GLU SEQRES 7 A 323 GLY ASP THR ILE HIS PHE THR LEU LYS ASN MET ASP PRO SEQRES 8 A 323 VAL VAL PRO HIS SER MET ASP PHE HIS ALA VAL HIS ALA SEQRES 9 A 323 SER PRO SER LYS ASP PHE ILE ASP VAL MET PRO ASN LYS SEQRES 10 A 323 SER GLY THR PHE THR TYR PRO ALA ASN LYS PRO GLY VAL SEQRES 11 A 323 PHE MET TYR HIS CYS GLY THR LYS PRO VAL LEU GLN HIS SEQRES 12 A 323 ILE ALA ASN GLY MET HIS GLY VAL ILE ILE VAL LYS PRO SEQRES 13 A 323 LYS ASN GLY TYR PRO THR ASP LYS GLU VAL ASP ARG GLU SEQRES 14 A 323 TYR VAL LEU ILE GLN ASN GLU TRP TYR LYS TYR ASN ASP SEQRES 15 A 323 MET ASN ASP PHE GLN ASN GLY VAL PRO SER TYR VAL VAL SEQRES 16 A 323 PHE SER SER LYS ALA LEU LYS PRO GLY ASP PRO ASN THR SEQRES 17 A 323 ASN GLY ASP THR PHE THR LEU LYS GLU LYS PRO LEU LEU SEQRES 18 A 323 ALA LYS VAL GLY GLU LYS ILE ARG LEU TYR ILE ASN ASN SEQRES 19 A 323 VAL GLY PRO ASN GLU VAL SER SER PHE HIS VAL VAL GLY SEQRES 20 A 323 THR VAL PHE ASP ASP VAL TYR LEU ASP GLY ASN PRO ASN SEQRES 21 A 323 ASN HIS LEU GLN GLY MET GLN THR VAL MET LEU PRO ALA SEQRES 22 A 323 SER GLY GLY ALA VAL VAL GLU PHE THR VAL THR ARG PRO SEQRES 23 A 323 GLY THR TYR PRO ILE VAL THR HIS GLN PHE ASN HIS ALA SEQRES 24 A 323 GLN LYS GLY ALA VAL ALA MET LEU LYS VAL THR GLU THR SEQRES 25 A 323 GLY GLU ASP ASP GLY THR GLU THR SER GLY HIS HET CU A 401 1 HET CU A 402 1 HET CU A 403 1 HET CU A 404 1 HET CU A 405 1 HET CU A 406 2 HET CU A 407 2 HET CU A 408 2 HET CU A 409 1 HET CU A 410 2 HET CU A 411 1 HET CU A 412 3 HET CU A 413 1 HET CU A 414 1 HET CU A 415 1 HET CU A 416 2 HET CU A 417 2 HET CL A 418 1 HET CL A 419 2 HET MPD A 420 8 HET MPD A 421 8 HET MPD A 422 8 HET PEG A 423 7 HET EDO A 424 4 HET EDO A 425 4 HET EDO A 426 8 HET SO4 A 427 5 HET SO4 A 428 5 HET ACY A 429 4 HET OXY A 430 2 HETNAM CU COPPER (II) ION HETNAM CL CHLORIDE ION HETNAM MPD (4S)-2-METHYL-2,4-PENTANEDIOL HETNAM PEG DI(HYDROXYETHYL)ETHER HETNAM EDO 1,2-ETHANEDIOL HETNAM SO4 SULFATE ION HETNAM ACY ACETIC ACID HETNAM OXY OXYGEN MOLECULE HETSYN EDO ETHYLENE GLYCOL FORMUL 2 CU 17(CU 2+) FORMUL 19 CL 2(CL 1-) FORMUL 21 MPD 3(C6 H14 O2) FORMUL 24 PEG C4 H10 O3 FORMUL 25 EDO 3(C2 H6 O2) FORMUL 28 SO4 2(O4 S 2-) FORMUL 30 ACY C2 H4 O2 FORMUL 31 OXY O2 FORMUL 32 HOH *382(H2 O) HELIX 1 1 ILE A 18 LYS A 22 5 5 HELIX 2 2 SER A 105 PHE A 110 1 6 HELIX 3 3 PRO A 139 ASN A 146 1 8 HELIX 4 4 THR A 162 VAL A 166 5 5 HELIX 5 5 ASP A 182 GLY A 189 1 8 HELIX 6 6 PHE A 213 LYS A 218 1 6 HELIX 7 7 GLN A 295 LYS A 301 1 7 SHEET 1 A 3 LYS A 32 GLY A 37 0 SHEET 2 A 3 ASP A 40 ASP A 55 -1 O HIS A 42 N GLU A 34 SHEET 3 A 3 LYS A 58 PHE A 65 -1 O TYR A 60 N ILE A 52 SHEET 1 B 4 LYS A 32 GLY A 37 0 SHEET 2 B 4 ASP A 40 ASP A 55 -1 O HIS A 42 N GLU A 34 SHEET 3 B 4 ASP A 80 ASN A 88 1 O THR A 85 N ILE A 43 SHEET 4 B 4 SER A 118 ALA A 125 -1 O PHE A 121 N PHE A 84 SHEET 1 C 4 VAL A 74 ASN A 77 0 SHEET 2 C 4 HIS A 149 LYS A 155 1 O ILE A 153 N VAL A 74 SHEET 3 C 4 GLY A 129 HIS A 134 -1 N GLY A 129 O VAL A 154 SHEET 4 C 4 ASP A 98 PHE A 99 -1 N ASP A 98 O HIS A 134 SHEET 1 D 6 TYR A 193 SER A 198 0 SHEET 2 D 6 ARG A 168 TRP A 177 -1 N ASN A 175 O VAL A 195 SHEET 3 D 6 LYS A 227 GLY A 236 1 O TYR A 231 N LEU A 172 SHEET 4 D 6 GLY A 276 THR A 282 -1 O PHE A 281 N ILE A 228 SHEET 5 D 6 PHE A 250 LEU A 255 -1 N TYR A 254 O VAL A 278 SHEET 6 D 6 HIS A 262 MET A 266 -1 O MET A 266 N PHE A 250 SHEET 1 E 5 LEU A 220 LYS A 223 0 SHEET 2 E 5 VAL A 304 THR A 310 1 O LYS A 308 N LEU A 220 SHEET 3 E 5 GLY A 287 THR A 293 -1 N GLY A 287 O VAL A 309 SHEET 4 E 5 SER A 241 VAL A 245 -1 N HIS A 244 O VAL A 292 SHEET 5 E 5 VAL A 269 LEU A 271 -1 O LEU A 271 N SER A 241 LINK CU A CU A 407 O HOH A 713 1555 1555 1.73 LINK CU CU A 415 O HOH A 780 1555 1555 1.74 LINK CU A CU A 408 O HOH A 773 1555 1555 1.80 LINK CU CU A 405 O ACY A 429 1555 1555 1.82 LINK OD2 ASP A 55 CU A CU A 408 1555 1555 1.82 LINK CU CU A 404 O HOH A 765 1555 1555 1.84 LINK CU A CU A 410 O AHOH A 850 1555 1555 1.85 LINK CU A CU A 407 O AHOH A 846 1555 1555 1.88 LINK CU B CU A 417 O BHOH A 726 1555 1555 1.90 LINK CU A CU A 417 O AHOH A 806 1555 1555 1.91 LINK CU CU A 413 O HOH A 799 1555 1555 1.91 LINK CU A CU A 408 O AHOH A 735 1555 1555 1.93 LINK NE2 HIS A 100 CU CU A 402 1555 1555 1.93 LINK OE2 GLU A 78 CU CU A 415 1555 1555 1.93 LINK OE1 GLU A 226 CU CU A 404 1555 1555 1.93 LINK CU CU A 415 O HOH A 770 1555 1555 1.93 LINK CU CU A 415 O HOH A 738 1555 1555 1.94 LINK CU B CU A 417 O HOH A 581 1555 1555 1.94 LINK CU CU A 405 O HOH A 796 1555 1555 1.95 LINK CU A CU A 410 O AHOH A 763 1555 1555 1.95 LINK CU B CU A 412 O HOH A 774 1555 1555 1.95 LINK OD1 ASP A 167 CU B CU A 410 1555 1555 1.96 LINK NE2 HIS A 134 CU CU A 402 1555 1555 1.97 LINK OD1 ASP A 40 CU C CU A 406 1555 1555 1.97 LINK ND1 HIS A 83 CU CU A 403 1555 1555 1.99 LINK CU A CU A 410 O HOH A 761 1555 1555 2.00 LINK CU CU A 413 O HOH A 792 1555 1555 2.01 LINK NE2AHIS A 39 CU A CU A 409 1555 1555 2.01 LINK ND1 HIS A 143 CU CU A 401 1555 1555 2.01 LINK ND1 HIS A 262 CU CU A 414 1555 1555 2.02 LINK OE2 GLU A 169 CU CU A 405 1555 1555 2.02 LINK OD2 ASP A 167 CU A CU A 410 1555 1555 2.03 LINK ND1 HIS A 95 CU CU A 401 1555 1555 2.04 LINK OD1 ASP A 55 CU B CU A 408 1555 1555 2.04 LINK NE2 HIS A 42 CU CU A 403 1555 1555 2.05 LINK CU B CU A 407 O HOH A 767 1555 1555 2.09 LINK CU A CU A 408 O HOH A 667 1555 1555 2.12 LINK OD1BASP A 251 CU B CU A 407 1555 1555 2.13 LINK OD2 ASP A 40 CU A CU A 406 1555 1555 2.13 LINK OD1AASP A 251 CU A CU A 411 1555 1555 2.14 LINK NE2 HIS A 298 CU A CU A 412 1555 1555 2.14 LINK SG CYS A 135 CU CU A 401 1555 1555 2.17 LINK CU A CU A 416 O AHOH A 804 1555 1555 2.18 LINK CU A CU A 412 O AHOH A 798 1555 1555 2.19 LINK CU A CU A 410 O HOH A 762 1555 1555 2.20 LINK OD2 ASP A 182 CU CU A 413 1555 1555 2.21 LINK OD2 ASP A 40 CU C CU A 406 1555 1555 2.22 LINK CU CU A 402 CL CL A 418 1555 1555 2.22 LINK CU CU A 402 O HOH A 778 1555 1555 2.23 LINK CU CU A 404 O HOH A 710 1555 1555 2.25 LINK CU CU A 405 O HOH A 771 1555 1555 2.25 LINK CU A CU A 409 O HOH A 858 1555 1555 2.30 LINK CU B CU A 408 O HOH A 773 1555 1555 2.32 LINK OE1BGLU A 239 CU B CU A 417 1555 1555 2.33 LINK CU CU A 403 O HOH A 559 1555 1555 2.34 LINK CU CU A 415 O HOH A 630 1555 1555 2.36 LINK CU CU A 413 O HOH A 791 1555 1555 2.37 LINK CU A CU A 406 CU A CU A 416 1555 1555 2.42 LINK CU A CU A 409 O HOH A 857 1555 1555 2.51 LINK CU CU A 405 O4 MPD A 420 1555 1555 2.56 LINK CU A CU A 412 O HOH A 774 1555 1555 2.61 LINK SD AMET A 148 CU CU A 401 1555 1555 2.61 LINK CU A CU A 406 O HOH A 653 1555 1555 2.68 CISPEP 1 ALA A 69 PRO A 70 0 -16.96 CISPEP 2 LYS A 138 PRO A 139 0 -8.45 CISPEP 3 GLY A 236 PRO A 237 0 17.78 SITE 1 AC1 4 HIS A 95 CYS A 135 HIS A 143 MET A 148 SITE 1 AC2 5 HIS A 100 HIS A 134 HIS A 294 CL A 418 SITE 2 AC2 5 HOH A 778 SITE 1 AC3 5 HIS A 42 GLU A 53 HIS A 83 HOH A 559 SITE 2 AC3 5 HOH A 612 SITE 1 AC4 4 GLU A 226 HOH A 710 HOH A 764 HOH A 765 SITE 1 AC5 5 GLU A 169 MPD A 420 ACY A 429 HOH A 771 SITE 2 AC5 5 HOH A 796 SITE 1 AC6 6 ASP A 40 GLU A 217 CU A 416 HOH A 653 SITE 2 AC6 6 HOH A 678 HOH A 804 SITE 1 AC7 5 GLU A 165 ASP A 251 HOH A 713 HOH A 767 SITE 2 AC7 5 HOH A 846 SITE 1 AC8 6 ASP A 55 HOH A 667 HOH A 721 HOH A 735 SITE 2 AC8 6 HOH A 773 HOH A 876 SITE 1 AC9 3 HIS A 39 HOH A 857 HOH A 858 SITE 1 BC1 6 ASP A 167 HOH A 761 HOH A 762 HOH A 763 SITE 2 BC1 6 HOH A 850 HOH A 869 SITE 1 BC2 3 LYS A 127 ASP A 251 THR A 282 SITE 1 BC3 9 PRO A 191 GLU A 239 ASN A 297 HIS A 298 SITE 2 BC3 9 CU A 417 HOH A 726 HOH A 774 HOH A 798 SITE 3 BC3 9 HOH A 810 SITE 1 BC4 4 ASP A 182 HOH A 791 HOH A 792 HOH A 799 SITE 1 BC5 2 HIS A 262 HOH A 769 SITE 1 BC6 5 GLU A 78 HOH A 630 HOH A 738 HOH A 770 SITE 2 BC6 5 HOH A 780 SITE 1 BC7 5 GLU A 217 CU A 406 HOH A 653 HOH A 678 SITE 2 BC7 5 HOH A 804 SITE 1 BC8 10 GLU A 239 CU A 412 HOH A 581 HOH A 594 SITE 2 BC8 10 HOH A 712 HOH A 726 HOH A 798 HOH A 806 SITE 3 BC8 10 HOH A 810 HOH A 867 SITE 1 BC9 7 HIS A 134 HIS A 244 VAL A 246 HIS A 294 SITE 2 BC9 7 CU A 402 HOH A 778 HOH A 831 SITE 1 CC1 8 VAL A 166 ASP A 167 ARG A 168 GLU A 169 SITE 2 CC1 8 ARG A 229 CU A 405 HOH A 624 HOH A 796 SITE 1 CC2 4 ARG A 285 HOH A 650 HOH A 775 HOH A 859 SITE 1 CC3 2 ARG A 168 LEU A 221 SITE 1 CC4 8 LYS A 32 MET A 33 GLU A 34 HIS A 42 SITE 2 CC4 8 GLU A 44 HOH A 618 HOH A 849 HOH A 865 SITE 1 CC5 3 LYS A 216 PRO A 219 MET A 306 SITE 1 CC6 5 LYS A 138 PRO A 139 GLN A 300 HOH A 580 SITE 2 CC6 5 HOH A 694 SITE 1 CC7 5 SER A 107 GLY A 287 THR A 288 LYS A 308 SITE 2 CC7 5 HOH A 627 SITE 1 CC8 3 ASN A 261 HIS A 262 LEU A 263 SITE 1 CC9 4 GLY A 23 LYS A 61 HOH A 728 HOH A 868 SITE 1 DC1 7 GLU A 169 LEU A 201 TYR A 231 CU A 405 SITE 2 DC1 7 HOH A 771 HOH A 796 HOH A 871 SITE 1 DC2 3 LYS A 58 TYR A 193 HOH A 632 CRYST1 115.054 115.054 84.417 90.00 90.00 120.00 H 3 9 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008692 0.005018 0.000000 0.00000 SCALE2 0.000000 0.010036 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011846 0.00000