data_3WN8 # _entry.id 3WN8 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.381 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3WN8 pdb_00003wn8 10.2210/pdb3wn8/pdb RCSB RCSB096547 ? ? WWPDB D_1000096547 ? ? # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 3B0S _pdbx_database_related.details 'The similar collagen-like peptide' _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3WN8 _pdbx_database_status.recvd_initial_deposition_date 2013-12-06 _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Okuyama, K.' 1 'Haga, M.' 2 'Noguchi, K.' 3 'Tanaka, T.' 4 # _citation.id primary _citation.title 'Preferred side-chain conformation of arginine residues in a triple-helical structure.' _citation.journal_abbrev Biopolymers _citation.journal_volume 101 _citation.page_first 1000 _citation.page_last 1009 _citation.year 2014 _citation.journal_id_ASTM BIPMAA _citation.country US _citation.journal_id_ISSN 0006-3525 _citation.journal_id_CSD 0161 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 24615532 _citation.pdbx_database_id_DOI 10.1002/bip.22478 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Okuyama, K.' 1 ? primary 'Haga, M.' 2 ? primary 'Noguchi, K.' 3 ? primary 'Tanaka, T.' 4 ? # _cell.entry_id 3WN8 _cell.length_a 23.285 _cell.length_b 19.567 _cell.length_c 49.022 _cell.angle_alpha 90.00 _cell.angle_beta 94.51 _cell.angle_gamma 90.00 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3WN8 _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn 'collagen-like peptide' 2200.345 3 ? ? ? ? 2 water nat water 18.015 129 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code 'P(HYP)GP(HYP)GP(HYP)GPRGP(HYP)GP(HYP)GP(HYP)GP(HYP)G' _entity_poly.pdbx_seq_one_letter_code_can PPGPPGPPGPRGPPGPPGPPGPPG _entity_poly.pdbx_strand_id A,B,C _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 PRO n 1 2 HYP n 1 3 GLY n 1 4 PRO n 1 5 HYP n 1 6 GLY n 1 7 PRO n 1 8 HYP n 1 9 GLY n 1 10 PRO n 1 11 ARG n 1 12 GLY n 1 13 PRO n 1 14 HYP n 1 15 GLY n 1 16 PRO n 1 17 HYP n 1 18 GLY n 1 19 PRO n 1 20 HYP n 1 21 GLY n 1 22 PRO n 1 23 HYP n 1 24 GLY n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific ? _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id ? _pdbx_entity_src_syn.details 'This peptide appears most frequently in native collagen.' # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 3WN8 _struct_ref.pdbx_db_accession 3WN8 _struct_ref.entity_id 1 _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3WN8 A 1 ? 24 ? 3WN8 1 ? 24 ? 1 24 2 1 3WN8 B 1 ? 24 ? 3WN8 1 ? 24 ? 1 24 3 1 3WN8 C 1 ? 24 ? 3WN8 1 ? 24 ? 1 24 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HOH non-polymer . WATER ? 'H2 O' 18.015 HYP 'L-peptide linking' n 4-HYDROXYPROLINE HYDROXYPROLINE 'C5 H9 N O3' 131.130 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 # _exptl.entry_id 3WN8 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 1.69 _exptl_crystal.density_percent_sol 27.07 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 277 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.6 _exptl_crystal_grow.pdbx_details '15 % PEG 4000, 0.05M Tris-HCl, 0.005M Lithium Sulfate, pH 7.6, VAPOR DIFFUSION, HANGING DROP, temperature 277K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 4r' _diffrn_detector.pdbx_collection_date 2004-03-21 _diffrn_detector.details mirrors # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.0 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'SPRING-8 BEAMLINE BL40B2' _diffrn_source.pdbx_synchrotron_site SPring-8 _diffrn_source.pdbx_synchrotron_beamline BL40B2 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.0 # _reflns.entry_id 3WN8 _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F 2.0 _reflns.d_resolution_low 8.0 _reflns.d_resolution_high 1.45 _reflns.number_obs 7224 _reflns.number_all ? _reflns.percent_possible_obs 92.8 _reflns.pdbx_Rmerge_I_obs 0.062 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _refine.entry_id 3WN8 _refine.ls_number_reflns_obs 6808 _refine.ls_number_reflns_all 7177 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 2.0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 8.00 _refine.ls_d_res_high 1.45 _refine.ls_percent_reflns_obs 85.0 _refine.ls_R_factor_obs ? _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.1408 _refine.ls_R_factor_R_free 0.2056 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.0 _refine.ls_number_reflns_R_free 369 _refine.ls_number_parameters 2415 _refine.ls_number_restraints 2138 _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model 'PDB ENTRY 1V4F' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 3WN8 _refine_analyze.Luzzati_coordinate_error_obs ? _refine_analyze.Luzzati_sigma_a_obs ? _refine_analyze.Luzzati_d_res_low_obs ? _refine_analyze.Luzzati_coordinate_error_free ? _refine_analyze.Luzzati_sigma_a_free ? _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues 2 _refine_analyze.occupancy_sum_hydrogen 402.00 _refine_analyze.occupancy_sum_non_hydrogen 591.50 _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 463 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 129 _refine_hist.number_atoms_total 592 _refine_hist.d_res_high 1.45 _refine_hist.d_res_low 8.00 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id s_bond_d 0.009 ? ? ? ? 'X-RAY DIFFRACTION' s_angle_d 0.023 ? ? ? ? 'X-RAY DIFFRACTION' s_similar_dist 0.000 ? ? ? ? 'X-RAY DIFFRACTION' s_from_restr_planes 0.0287 ? ? ? ? 'X-RAY DIFFRACTION' s_zero_chiral_vol 0.057 ? ? ? ? 'X-RAY DIFFRACTION' s_non_zero_chiral_vol 0.044 ? ? ? ? 'X-RAY DIFFRACTION' s_anti_bump_dis_restr 0.006 ? ? ? ? 'X-RAY DIFFRACTION' s_rigid_bond_adp_cmpnt 0.000 ? ? ? ? 'X-RAY DIFFRACTION' s_similar_adp_cmpnt 0.035 ? ? ? ? 'X-RAY DIFFRACTION' s_approx_iso_adps 0.000 ? ? ? ? 'X-RAY DIFFRACTION' # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.redundancy_reflns_obs 'X-RAY DIFFRACTION' 6 1.45 1.51 . 0.197 . . . . . . . 753 . 'X-RAY DIFFRACTION' 6 1.51 1.56 . 0.193 . . . . . . . 618 . 'X-RAY DIFFRACTION' 6 1.56 1.62 . 0.166 . . . . . . . 679 . 'X-RAY DIFFRACTION' 6 1.62 1.71 . 0.162 . . . . . . . 706 . 'X-RAY DIFFRACTION' 6 1.71 1.80 . 0.158 . . . . . . . 662 . 'X-RAY DIFFRACTION' 6 1.80 1.92 . 0.145 . . . . . . . 685 . # _pdbx_refine.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine.entry_id 3WN8 _pdbx_refine.R_factor_all_no_cutoff ? _pdbx_refine.R_factor_obs_no_cutoff 0.1408 _pdbx_refine.free_R_factor_no_cutoff 0.2056 _pdbx_refine.free_R_error_no_cutoff ? _pdbx_refine.free_R_val_test_set_size_perc_no_cutoff 5.0 _pdbx_refine.free_R_val_test_set_ct_no_cutoff 369 _pdbx_refine.R_factor_all_4sig_cutoff ? _pdbx_refine.R_factor_obs_4sig_cutoff 0.1369 _pdbx_refine.free_R_factor_4sig_cutoff 0.1986 _pdbx_refine.free_R_val_test_set_size_perc_4sig_cutoff 5.0 _pdbx_refine.free_R_val_test_set_ct_4sig_cutoff 342 _pdbx_refine.number_reflns_obs_4sig_cutoff 6776 # _struct.entry_id 3WN8 _struct.title 'Crystal Structure of Collagen-Model Peptide, (POG)3-PRG-(POG)4' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3WN8 _struct_keywords.pdbx_keywords 'STRUCTURAL PROTEIN' _struct_keywords.text 'collagen-helix, HSP47 Binding, STRUCTURAL PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 1 ? D N N 2 ? E N N 2 ? F N N 2 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A PRO 1 C ? ? ? 1_555 A HYP 2 N ? ? A PRO 1 A HYP 2 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale2 covale both ? A HYP 2 C ? ? ? 1_555 A GLY 3 N ? ? A HYP 2 A GLY 3 1_555 ? ? ? ? ? ? ? 1.325 ? ? covale3 covale both ? A PRO 4 C ? ? ? 1_555 A HYP 5 N ? ? A PRO 4 A HYP 5 1_555 ? ? ? ? ? ? ? 1.340 ? ? covale4 covale both ? A HYP 5 C ? ? ? 1_555 A GLY 6 N ? ? A HYP 5 A GLY 6 1_555 ? ? ? ? ? ? ? 1.326 ? ? covale5 covale both ? A PRO 7 C ? ? ? 1_555 A HYP 8 N ? ? A PRO 7 A HYP 8 1_555 ? ? ? ? ? ? ? 1.314 ? ? covale6 covale both ? A HYP 8 C ? ? ? 1_555 A GLY 9 N ? ? A HYP 8 A GLY 9 1_555 ? ? ? ? ? ? ? 1.323 ? ? covale7 covale both ? A PRO 13 C ? ? ? 1_555 A HYP 14 N ? ? A PRO 13 A HYP 14 1_555 ? ? ? ? ? ? ? 1.339 ? ? covale8 covale both ? A HYP 14 C ? ? ? 1_555 A GLY 15 N ? ? A HYP 14 A GLY 15 1_555 ? ? ? ? ? ? ? 1.339 ? ? covale9 covale both ? A PRO 16 C ? ? ? 1_555 A HYP 17 N ? ? A PRO 16 A HYP 17 1_555 ? ? ? ? ? ? ? 1.335 ? ? covale10 covale both ? A HYP 17 C ? ? ? 1_555 A GLY 18 N ? ? A HYP 17 A GLY 18 1_555 ? ? ? ? ? ? ? 1.343 ? ? covale11 covale both ? A PRO 19 C ? ? ? 1_555 A HYP 20 N ? ? A PRO 19 A HYP 20 1_555 ? ? ? ? ? ? ? 1.343 ? ? covale12 covale both ? A HYP 20 C ? ? ? 1_555 A GLY 21 N ? ? A HYP 20 A GLY 21 1_555 ? ? ? ? ? ? ? 1.325 ? ? covale13 covale both ? A PRO 22 C ? ? ? 1_555 A HYP 23 N ? ? A PRO 22 A HYP 23 1_555 ? ? ? ? ? ? ? 1.322 ? ? covale14 covale both ? A HYP 23 C ? ? ? 1_555 A GLY 24 N ? ? A HYP 23 A GLY 24 1_555 ? ? ? ? ? ? ? 1.333 ? ? covale15 covale both ? B PRO 1 C ? ? ? 1_555 B HYP 2 N ? ? B PRO 1 B HYP 2 1_555 ? ? ? ? ? ? ? 1.326 ? ? covale16 covale both ? B HYP 2 C ? ? ? 1_555 B GLY 3 N ? ? B HYP 2 B GLY 3 1_555 ? ? ? ? ? ? ? 1.340 ? ? covale17 covale both ? B PRO 4 C ? ? ? 1_555 B HYP 5 N ? ? B PRO 4 B HYP 5 1_555 ? ? ? ? ? ? ? 1.325 ? ? covale18 covale both ? B HYP 5 C ? ? ? 1_555 B GLY 6 N ? ? B HYP 5 B GLY 6 1_555 ? ? ? ? ? ? ? 1.325 ? ? covale19 covale both ? B PRO 7 C ? ? ? 1_555 B HYP 8 N ? ? B PRO 7 B HYP 8 1_555 ? ? ? ? ? ? ? 1.322 ? ? covale20 covale both ? B HYP 8 C ? ? ? 1_555 B GLY 9 N ? ? B HYP 8 B GLY 9 1_555 ? ? ? ? ? ? ? 1.333 ? ? covale21 covale both ? B PRO 13 C ? ? ? 1_555 B HYP 14 N ? ? B PRO 13 B HYP 14 1_555 ? ? ? ? ? ? ? 1.321 ? ? covale22 covale both ? B HYP 14 C ? ? ? 1_555 B GLY 15 N ? ? B HYP 14 B GLY 15 1_555 ? ? ? ? ? ? ? 1.332 ? ? covale23 covale both ? B PRO 16 C ? ? ? 1_555 B HYP 17 N ? ? B PRO 16 B HYP 17 1_555 ? ? ? ? ? ? ? 1.325 ? ? covale24 covale both ? B HYP 17 C ? ? ? 1_555 B GLY 18 N ? ? B HYP 17 B GLY 18 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale25 covale both ? B PRO 19 C ? ? ? 1_555 B HYP 20 N ? ? B PRO 19 B HYP 20 1_555 ? ? ? ? ? ? ? 1.324 ? ? covale26 covale both ? B HYP 20 C ? ? ? 1_555 B GLY 21 N ? ? B HYP 20 B GLY 21 1_555 ? ? ? ? ? ? ? 1.332 ? ? covale27 covale both ? B PRO 22 C ? ? ? 1_555 B HYP 23 N ? ? B PRO 22 B HYP 23 1_555 ? ? ? ? ? ? ? 1.338 ? ? covale28 covale both ? C PRO 1 C ? ? ? 1_555 C HYP 2 N ? ? C PRO 1 C HYP 2 1_555 ? ? ? ? ? ? ? 1.322 ? ? covale29 covale both ? C HYP 2 C ? ? ? 1_555 C GLY 3 N ? ? C HYP 2 C GLY 3 1_555 ? ? ? ? ? ? ? 1.339 ? ? covale30 covale both ? C PRO 4 C ? ? ? 1_555 C HYP 5 N ? ? C PRO 4 C HYP 5 1_555 ? ? ? ? ? ? ? 1.333 ? ? covale31 covale both ? C HYP 5 C ? ? ? 1_555 C GLY 6 N ? ? C HYP 5 C GLY 6 1_555 ? ? ? ? ? ? ? 1.338 ? ? covale32 covale both ? C PRO 7 C ? ? ? 1_555 C HYP 8 N ? ? C PRO 7 C HYP 8 1_555 ? ? ? ? ? ? ? 1.328 ? ? covale33 covale both ? C HYP 8 C ? ? ? 1_555 C GLY 9 N ? ? C HYP 8 C GLY 9 1_555 ? ? ? ? ? ? ? 1.320 ? ? covale34 covale both ? C PRO 13 C ? ? ? 1_555 C HYP 14 N ? ? C PRO 13 C HYP 14 1_555 ? ? ? ? ? ? ? 1.317 ? ? covale35 covale both ? C HYP 14 C ? ? ? 1_555 C GLY 15 N ? ? C HYP 14 C GLY 15 1_555 ? ? ? ? ? ? ? 1.337 ? ? covale36 covale both ? C PRO 16 C ? ? ? 1_555 C HYP 17 N ? ? C PRO 16 C HYP 17 1_555 ? ? ? ? ? ? ? 1.320 ? ? covale37 covale both ? C HYP 17 C ? ? ? 1_555 C GLY 18 N ? ? C HYP 17 C GLY 18 1_555 ? ? ? ? ? ? ? 1.328 ? ? covale38 covale both ? C PRO 19 C ? ? ? 1_555 C HYP 20 N ? ? C PRO 19 C HYP 20 1_555 ? ? ? ? ? ? ? 1.327 ? ? covale39 covale both ? C HYP 20 C ? ? ? 1_555 C GLY 21 N ? ? C HYP 20 C GLY 21 1_555 ? ? ? ? ? ? ? 1.332 ? ? covale40 covale both ? C PRO 22 C ? ? ? 1_555 C HYP 23 N ? ? C PRO 22 C HYP 23 1_555 ? ? ? ? ? ? ? 1.334 ? ? covale41 covale both ? C HYP 23 C ? ? ? 1_555 C GLY 24 N ? ? C HYP 23 C GLY 24 1_555 ? ? ? ? ? ? ? 1.323 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # _database_PDB_matrix.entry_id 3WN8 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.000000 _database_PDB_matrix.origx_vector[2] 0.000000 _database_PDB_matrix.origx_vector[3] 0.000000 # _atom_sites.entry_id 3WN8 _atom_sites.fract_transf_matrix[1][1] 0.042946 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.003388 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.051106 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.020462 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 PRO 1 1 1 PRO PRO A . n A 1 2 HYP 2 2 2 HYP HYP A . n A 1 3 GLY 3 3 3 GLY GLY A . n A 1 4 PRO 4 4 4 PRO PRO A . n A 1 5 HYP 5 5 5 HYP HYP A . n A 1 6 GLY 6 6 6 GLY GLY A . n A 1 7 PRO 7 7 7 PRO PRO A . n A 1 8 HYP 8 8 8 HYP HYP A . n A 1 9 GLY 9 9 9 GLY GLY A . n A 1 10 PRO 10 10 10 PRO PRO A . n A 1 11 ARG 11 11 11 ARG ARG A . n A 1 12 GLY 12 12 12 GLY GLY A . n A 1 13 PRO 13 13 13 PRO PRO A . n A 1 14 HYP 14 14 14 HYP HYP A . n A 1 15 GLY 15 15 15 GLY GLY A . n A 1 16 PRO 16 16 16 PRO PRO A . n A 1 17 HYP 17 17 17 HYP HYP A . n A 1 18 GLY 18 18 18 GLY GLY A . n A 1 19 PRO 19 19 19 PRO PRO A . n A 1 20 HYP 20 20 20 HYP HYP A . n A 1 21 GLY 21 21 21 GLY GLY A . n A 1 22 PRO 22 22 22 PRO PRO A . n A 1 23 HYP 23 23 23 HYP HYP A . n A 1 24 GLY 24 24 24 GLY GLY A . n B 1 1 PRO 1 1 1 PRO PRO B . n B 1 2 HYP 2 2 2 HYP HYP B . n B 1 3 GLY 3 3 3 GLY GLY B . n B 1 4 PRO 4 4 4 PRO PRO B . n B 1 5 HYP 5 5 5 HYP HYP B . n B 1 6 GLY 6 6 6 GLY GLY B . n B 1 7 PRO 7 7 7 PRO PRO B . n B 1 8 HYP 8 8 8 HYP HYP B . n B 1 9 GLY 9 9 9 GLY GLY B . n B 1 10 PRO 10 10 10 PRO PRO B . n B 1 11 ARG 11 11 11 ARG ARG B . n B 1 12 GLY 12 12 12 GLY GLY B . n B 1 13 PRO 13 13 13 PRO PRO B . n B 1 14 HYP 14 14 14 HYP HYP B . n B 1 15 GLY 15 15 15 GLY GLY B . n B 1 16 PRO 16 16 16 PRO PRO B . n B 1 17 HYP 17 17 17 HYP HYP B . n B 1 18 GLY 18 18 18 GLY GLY B . n B 1 19 PRO 19 19 19 PRO PRO B . n B 1 20 HYP 20 20 20 HYP HYP B . n B 1 21 GLY 21 21 21 GLY GLY B . n B 1 22 PRO 22 22 22 PRO PRO B . n B 1 23 HYP 23 23 23 HYP HYP B . n B 1 24 GLY 24 24 ? ? ? B . n C 1 1 PRO 1 1 1 PRO PRO C . n C 1 2 HYP 2 2 2 HYP HYP C . n C 1 3 GLY 3 3 3 GLY GLY C . n C 1 4 PRO 4 4 4 PRO PRO C . n C 1 5 HYP 5 5 5 HYP HYP C . n C 1 6 GLY 6 6 6 GLY GLY C . n C 1 7 PRO 7 7 7 PRO PRO C . n C 1 8 HYP 8 8 8 HYP HYP C . n C 1 9 GLY 9 9 9 GLY GLY C . n C 1 10 PRO 10 10 10 PRO PRO C . n C 1 11 ARG 11 11 11 ARG ARG C . n C 1 12 GLY 12 12 12 GLY GLY C . n C 1 13 PRO 13 13 13 PRO PRO C . n C 1 14 HYP 14 14 14 HYP HYP C . n C 1 15 GLY 15 15 15 GLY GLY C . n C 1 16 PRO 16 16 16 PRO PRO C . n C 1 17 HYP 17 17 17 HYP HYP C . n C 1 18 GLY 18 18 18 GLY GLY C . n C 1 19 PRO 19 19 19 PRO PRO C . n C 1 20 HYP 20 20 20 HYP HYP C . n C 1 21 GLY 21 21 21 GLY GLY C . n C 1 22 PRO 22 22 22 PRO PRO C . n C 1 23 HYP 23 23 23 HYP HYP C . n C 1 24 GLY 24 24 24 GLY GLY C . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 HOH 1 101 1 HOH HOH A . D 2 HOH 2 102 2 HOH HOH A . D 2 HOH 3 103 3 HOH HOH A . D 2 HOH 4 104 4 HOH HOH A . D 2 HOH 5 105 5 HOH HOH A . D 2 HOH 6 106 6 HOH HOH A . D 2 HOH 7 107 7 HOH HOH A . D 2 HOH 8 108 8 HOH HOH A . D 2 HOH 9 109 9 HOH HOH A . D 2 HOH 10 110 10 HOH HOH A . D 2 HOH 11 111 11 HOH HOH A . D 2 HOH 12 112 13 HOH HOH A . D 2 HOH 13 113 14 HOH HOH A . D 2 HOH 14 114 15 HOH HOH A . D 2 HOH 15 115 16 HOH HOH A . D 2 HOH 16 116 17 HOH HOH A . D 2 HOH 17 117 18 HOH HOH A . D 2 HOH 18 118 19 HOH HOH A . D 2 HOH 19 119 20 HOH HOH A . D 2 HOH 20 120 60 HOH HOH A . D 2 HOH 21 121 63 HOH HOH A . D 2 HOH 22 122 64 HOH HOH A . D 2 HOH 23 123 69 HOH HOH A . D 2 HOH 24 124 71 HOH HOH A . D 2 HOH 25 125 86 HOH HOH A . D 2 HOH 26 126 89 HOH HOH A . D 2 HOH 27 127 90 HOH HOH A . D 2 HOH 28 128 94 HOH HOH A . D 2 HOH 29 129 95 HOH HOH A . D 2 HOH 30 130 101 HOH HOH A . D 2 HOH 31 131 106 HOH HOH A . D 2 HOH 32 132 115 HOH HOH A . D 2 HOH 33 133 129 HOH HOH A . D 2 HOH 34 134 127 HOH HOH A . D 2 HOH 35 135 41 HOH HOH A . D 2 HOH 36 136 91 HOH HOH A . D 2 HOH 37 137 114 HOH HOH A . E 2 HOH 1 101 12 HOH HOH B . E 2 HOH 2 102 23 HOH HOH B . E 2 HOH 3 103 24 HOH HOH B . E 2 HOH 4 104 25 HOH HOH B . E 2 HOH 5 105 27 HOH HOH B . E 2 HOH 6 106 28 HOH HOH B . E 2 HOH 7 107 29 HOH HOH B . E 2 HOH 8 108 30 HOH HOH B . E 2 HOH 9 109 31 HOH HOH B . E 2 HOH 10 110 32 HOH HOH B . E 2 HOH 11 111 33 HOH HOH B . E 2 HOH 12 112 34 HOH HOH B . E 2 HOH 13 113 35 HOH HOH B . E 2 HOH 14 114 36 HOH HOH B . E 2 HOH 15 115 37 HOH HOH B . E 2 HOH 16 116 38 HOH HOH B . E 2 HOH 17 117 39 HOH HOH B . E 2 HOH 18 118 40 HOH HOH B . E 2 HOH 19 119 61 HOH HOH B . E 2 HOH 20 120 68 HOH HOH B . E 2 HOH 21 121 72 HOH HOH B . E 2 HOH 22 122 73 HOH HOH B . E 2 HOH 23 123 74 HOH HOH B . E 2 HOH 24 124 76 HOH HOH B . E 2 HOH 25 125 77 HOH HOH B . E 2 HOH 26 126 79 HOH HOH B . E 2 HOH 27 127 80 HOH HOH B . E 2 HOH 28 128 99 HOH HOH B . E 2 HOH 29 129 100 HOH HOH B . E 2 HOH 30 130 102 HOH HOH B . E 2 HOH 31 131 107 HOH HOH B . E 2 HOH 32 132 108 HOH HOH B . E 2 HOH 33 133 112 HOH HOH B . E 2 HOH 34 134 117 HOH HOH B . E 2 HOH 35 135 120 HOH HOH B . E 2 HOH 36 136 123 HOH HOH B . E 2 HOH 37 137 125 HOH HOH B . E 2 HOH 38 138 128 HOH HOH B . E 2 HOH 39 139 22 HOH HOH B . E 2 HOH 40 140 103 HOH HOH B . E 2 HOH 41 141 116 HOH HOH B . F 2 HOH 1 101 42 HOH HOH C . F 2 HOH 2 102 26 HOH HOH C . F 2 HOH 3 103 46 HOH HOH C . F 2 HOH 4 104 66 HOH HOH C . F 2 HOH 5 105 87 HOH HOH C . F 2 HOH 6 106 21 HOH HOH C . F 2 HOH 7 107 43 HOH HOH C . F 2 HOH 8 108 44 HOH HOH C . F 2 HOH 9 109 45 HOH HOH C . F 2 HOH 10 110 47 HOH HOH C . F 2 HOH 11 111 48 HOH HOH C . F 2 HOH 12 112 49 HOH HOH C . F 2 HOH 13 113 50 HOH HOH C . F 2 HOH 14 114 51 HOH HOH C . F 2 HOH 15 115 52 HOH HOH C . F 2 HOH 16 116 53 HOH HOH C . F 2 HOH 17 117 54 HOH HOH C . F 2 HOH 18 118 55 HOH HOH C . F 2 HOH 19 119 56 HOH HOH C . F 2 HOH 20 120 57 HOH HOH C . F 2 HOH 21 121 58 HOH HOH C . F 2 HOH 22 122 59 HOH HOH C . F 2 HOH 23 123 62 HOH HOH C . F 2 HOH 24 124 65 HOH HOH C . F 2 HOH 25 125 67 HOH HOH C . F 2 HOH 26 126 70 HOH HOH C . F 2 HOH 27 127 75 HOH HOH C . F 2 HOH 28 128 78 HOH HOH C . F 2 HOH 29 129 81 HOH HOH C . F 2 HOH 30 130 82 HOH HOH C . F 2 HOH 31 131 83 HOH HOH C . F 2 HOH 32 132 84 HOH HOH C . F 2 HOH 33 133 85 HOH HOH C . F 2 HOH 34 134 88 HOH HOH C . F 2 HOH 35 135 92 HOH HOH C . F 2 HOH 36 136 93 HOH HOH C . F 2 HOH 37 137 96 HOH HOH C . F 2 HOH 38 138 97 HOH HOH C . F 2 HOH 39 139 98 HOH HOH C . F 2 HOH 40 140 104 HOH HOH C . F 2 HOH 41 141 105 HOH HOH C . F 2 HOH 42 142 109 HOH HOH C . F 2 HOH 43 143 110 HOH HOH C . F 2 HOH 44 144 111 HOH HOH C . F 2 HOH 45 145 113 HOH HOH C . F 2 HOH 46 146 118 HOH HOH C . F 2 HOH 47 147 119 HOH HOH C . F 2 HOH 48 148 121 HOH HOH C . F 2 HOH 49 149 122 HOH HOH C . F 2 HOH 50 150 124 HOH HOH C . F 2 HOH 51 151 126 HOH HOH C . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A HYP 2 A HYP 2 ? PRO 4-HYDROXYPROLINE 2 A HYP 5 A HYP 5 ? PRO 4-HYDROXYPROLINE 3 A HYP 8 A HYP 8 ? PRO 4-HYDROXYPROLINE 4 A HYP 14 A HYP 14 ? PRO 4-HYDROXYPROLINE 5 A HYP 17 A HYP 17 ? PRO 4-HYDROXYPROLINE 6 A HYP 20 A HYP 20 ? PRO 4-HYDROXYPROLINE 7 A HYP 23 A HYP 23 ? PRO 4-HYDROXYPROLINE 8 B HYP 2 B HYP 2 ? PRO 4-HYDROXYPROLINE 9 B HYP 5 B HYP 5 ? PRO 4-HYDROXYPROLINE 10 B HYP 8 B HYP 8 ? PRO 4-HYDROXYPROLINE 11 B HYP 14 B HYP 14 ? PRO 4-HYDROXYPROLINE 12 B HYP 17 B HYP 17 ? PRO 4-HYDROXYPROLINE 13 B HYP 20 B HYP 20 ? PRO 4-HYDROXYPROLINE 14 B HYP 23 B HYP 23 ? PRO 4-HYDROXYPROLINE 15 C HYP 2 C HYP 2 ? PRO 4-HYDROXYPROLINE 16 C HYP 5 C HYP 5 ? PRO 4-HYDROXYPROLINE 17 C HYP 8 C HYP 8 ? PRO 4-HYDROXYPROLINE 18 C HYP 14 C HYP 14 ? PRO 4-HYDROXYPROLINE 19 C HYP 17 C HYP 17 ? PRO 4-HYDROXYPROLINE 20 C HYP 20 C HYP 20 ? PRO 4-HYDROXYPROLINE 21 C HYP 23 C HYP 23 ? PRO 4-HYDROXYPROLINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 4070 ? 1 MORE -21 ? 1 'SSA (A^2)' 4250 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2014-08-13 2 'Structure model' 1 1 2023-11-08 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' 3 2 'Structure model' 'Derived calculations' 4 2 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' chem_comp_atom 2 2 'Structure model' chem_comp_bond 3 2 'Structure model' database_2 4 2 'Structure model' pdbx_initial_refinement_model 5 2 'Structure model' struct_conn # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_database_2.pdbx_DOI' 2 2 'Structure model' '_database_2.pdbx_database_accession' 3 2 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal CrystalClear 'data collection' . ? 1 X-PLOR 'model building' . ? 2 SHELXL-97 refinement . ? 3 CrystalClear 'data reduction' . ? 4 CrystalClear 'data scaling' . ? 5 X-PLOR phasing . ? 6 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 NE B ARG 11 ? A CZ B ARG 11 ? A NH1 B ARG 11 ? A 117.19 120.30 -3.11 0.50 N 2 1 NE B ARG 11 ? A CZ B ARG 11 ? A NH2 B ARG 11 ? A 123.41 120.30 3.11 0.50 N # _pdbx_unobs_or_zero_occ_residues.id 1 _pdbx_unobs_or_zero_occ_residues.PDB_model_num 1 _pdbx_unobs_or_zero_occ_residues.polymer_flag Y _pdbx_unobs_or_zero_occ_residues.occupancy_flag 1 _pdbx_unobs_or_zero_occ_residues.auth_asym_id B _pdbx_unobs_or_zero_occ_residues.auth_comp_id GLY _pdbx_unobs_or_zero_occ_residues.auth_seq_id 24 _pdbx_unobs_or_zero_occ_residues.PDB_ins_code ? _pdbx_unobs_or_zero_occ_residues.label_asym_id B _pdbx_unobs_or_zero_occ_residues.label_comp_id GLY _pdbx_unobs_or_zero_occ_residues.label_seq_id 24 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ARG N N N N 1 ARG CA C N S 2 ARG C C N N 3 ARG O O N N 4 ARG CB C N N 5 ARG CG C N N 6 ARG CD C N N 7 ARG NE N N N 8 ARG CZ C N N 9 ARG NH1 N N N 10 ARG NH2 N N N 11 ARG OXT O N N 12 ARG H H N N 13 ARG H2 H N N 14 ARG HA H N N 15 ARG HB2 H N N 16 ARG HB3 H N N 17 ARG HG2 H N N 18 ARG HG3 H N N 19 ARG HD2 H N N 20 ARG HD3 H N N 21 ARG HE H N N 22 ARG HH11 H N N 23 ARG HH12 H N N 24 ARG HH21 H N N 25 ARG HH22 H N N 26 ARG HXT H N N 27 GLY N N N N 28 GLY CA C N N 29 GLY C C N N 30 GLY O O N N 31 GLY OXT O N N 32 GLY H H N N 33 GLY H2 H N N 34 GLY HA2 H N N 35 GLY HA3 H N N 36 GLY HXT H N N 37 HOH O O N N 38 HOH H1 H N N 39 HOH H2 H N N 40 HYP N N N N 41 HYP CA C N S 42 HYP C C N N 43 HYP O O N N 44 HYP CB C N N 45 HYP CG C N R 46 HYP CD C N N 47 HYP OD1 O N N 48 HYP OXT O N N 49 HYP H H N N 50 HYP HA H N N 51 HYP HB2 H N N 52 HYP HB3 H N N 53 HYP HG H N N 54 HYP HD22 H N N 55 HYP HD23 H N N 56 HYP HD1 H N N 57 HYP HXT H N N 58 PRO N N N N 59 PRO CA C N S 60 PRO C C N N 61 PRO O O N N 62 PRO CB C N N 63 PRO CG C N N 64 PRO CD C N N 65 PRO OXT O N N 66 PRO H H N N 67 PRO HA H N N 68 PRO HB2 H N N 69 PRO HB3 H N N 70 PRO HG2 H N N 71 PRO HG3 H N N 72 PRO HD2 H N N 73 PRO HD3 H N N 74 PRO HXT H N N 75 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ARG N CA sing N N 1 ARG N H sing N N 2 ARG N H2 sing N N 3 ARG CA C sing N N 4 ARG CA CB sing N N 5 ARG CA HA sing N N 6 ARG C O doub N N 7 ARG C OXT sing N N 8 ARG CB CG sing N N 9 ARG CB HB2 sing N N 10 ARG CB HB3 sing N N 11 ARG CG CD sing N N 12 ARG CG HG2 sing N N 13 ARG CG HG3 sing N N 14 ARG CD NE sing N N 15 ARG CD HD2 sing N N 16 ARG CD HD3 sing N N 17 ARG NE CZ sing N N 18 ARG NE HE sing N N 19 ARG CZ NH1 sing N N 20 ARG CZ NH2 doub N N 21 ARG NH1 HH11 sing N N 22 ARG NH1 HH12 sing N N 23 ARG NH2 HH21 sing N N 24 ARG NH2 HH22 sing N N 25 ARG OXT HXT sing N N 26 GLY N CA sing N N 27 GLY N H sing N N 28 GLY N H2 sing N N 29 GLY CA C sing N N 30 GLY CA HA2 sing N N 31 GLY CA HA3 sing N N 32 GLY C O doub N N 33 GLY C OXT sing N N 34 GLY OXT HXT sing N N 35 HOH O H1 sing N N 36 HOH O H2 sing N N 37 HYP N CA sing N N 38 HYP N CD sing N N 39 HYP N H sing N N 40 HYP CA C sing N N 41 HYP CA CB sing N N 42 HYP CA HA sing N N 43 HYP C O doub N N 44 HYP C OXT sing N N 45 HYP CB CG sing N N 46 HYP CB HB2 sing N N 47 HYP CB HB3 sing N N 48 HYP CG CD sing N N 49 HYP CG OD1 sing N N 50 HYP CG HG sing N N 51 HYP CD HD22 sing N N 52 HYP CD HD23 sing N N 53 HYP OD1 HD1 sing N N 54 HYP OXT HXT sing N N 55 PRO N CA sing N N 56 PRO N CD sing N N 57 PRO N H sing N N 58 PRO CA C sing N N 59 PRO CA CB sing N N 60 PRO CA HA sing N N 61 PRO C O doub N N 62 PRO C OXT sing N N 63 PRO CB CG sing N N 64 PRO CB HB2 sing N N 65 PRO CB HB3 sing N N 66 PRO CG CD sing N N 67 PRO CG HG2 sing N N 68 PRO CG HG3 sing N N 69 PRO CD HD2 sing N N 70 PRO CD HD3 sing N N 71 PRO OXT HXT sing N N 72 # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1V4F _pdbx_initial_refinement_model.details 'PDB ENTRY 1V4F' #