HEADER HYDROLASE INHIBITOR 18-DEC-13 3WNY TITLE A SIMPLIFIED BPTI VARIANT WITH POLY LYS AMINO ACID TAG (C3K) AT THE C- TITLE 2 TERMINUS COMPND MOL_ID: 1; COMPND 2 MOLECULE: BOVINE PANCREATIC TRYPSIN INHIBITOR; COMPND 3 CHAIN: A, C, E, G, B, F, H, I; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BOS TAURUS; SOURCE 3 ORGANISM_COMMON: BOVINE; SOURCE 4 ORGANISM_TAXID: 9913; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS SINGLE DOMAIN PROTEIN, TRYPSIN INHIBITORY, TRYPSIN, HYDROLASE KEYWDS 2 INHIBITOR EXPDTA X-RAY DIFFRACTION AUTHOR M.M.ISLAM REVDAT 1 18-JUN-14 3WNY 0 JRNL AUTH M.M.ISLAM JRNL TITL A SIMPLIFIED BPTI VARIANT WITH POLY LYS AMINO ACID TAG (C3K) JRNL TITL 2 AT THE C-TERMINUS JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 25.09 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 96.1 REMARK 3 NUMBER OF REFLECTIONS : 98840 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.261 REMARK 3 R VALUE (WORKING SET) : 0.260 REMARK 3 FREE R VALUE : 0.293 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 5188 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.30 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.33 REMARK 3 REFLECTION IN BIN (WORKING SET) : 7150 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 94.92 REMARK 3 BIN R VALUE (WORKING SET) : 0.2710 REMARK 3 BIN FREE R VALUE SET COUNT : 397 REMARK 3 BIN FREE R VALUE : 0.2940 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3228 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 10 REMARK 3 SOLVENT ATOMS : 1056 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 20.74 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.02000 REMARK 3 B22 (A**2) : -0.06000 REMARK 3 B33 (A**2) : 0.04000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.01000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.093 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.082 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.041 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.056 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.940 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.924 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3368 ; 0.007 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4587 ; 1.141 ; 1.940 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 451 ; 5.927 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 140 ;18.075 ;21.286 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 389 ;11.370 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 30 ;10.873 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 463 ; 0.075 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2737 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1858 ; 0.187 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 2367 ; 0.314 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 735 ; 0.197 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 110 ; 0.215 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 88 ; 0.201 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2274 ; 0.964 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3477 ; 1.521 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1245 ; 2.403 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1106 ; 3.072 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3WNY COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 27-DEC-13. REMARK 100 THE RCSB ID CODE IS RCSB096573. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 28-APR-10 REMARK 200 TEMPERATURE (KELVIN) : 95 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PHOTON FACTORY REMARK 200 BEAMLINE : AR-NE3A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.00 REMARK 200 MONOCHROMATOR : GRAPHITE REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 1 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 104028 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.300 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 3.700 REMARK 200 R MERGE (I) : 0.23000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : 99.6 REMARK 200 DATA REDUNDANCY IN SHELL : 3.70 REMARK 200 R MERGE FOR SHELL (I) : 0.23000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: XFIT REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.55 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.14 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20-25% PEG4000, 0.1M TRISHCL, 0.2M REMARK 280 AMMONIUM SULFATE, PH 8.5, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 35.72000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4, 5, 6, 7, 8 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: E REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: G REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 5 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 6 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 7 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: H REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 8 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: I REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A 57 REMARK 465 ALA A 58 REMARK 465 GLY A 59 REMARK 465 GLY A 60 REMARK 465 LYS A 61 REMARK 465 LYS A 62 REMARK 465 LYS A 63 REMARK 465 ALA C 58 REMARK 465 GLY C 59 REMARK 465 GLY C 60 REMARK 465 LYS C 61 REMARK 465 LYS C 62 REMARK 465 LYS C 63 REMARK 465 ALA E 57 REMARK 465 ALA E 58 REMARK 465 GLY E 59 REMARK 465 GLY E 60 REMARK 465 LYS E 61 REMARK 465 LYS E 62 REMARK 465 LYS E 63 REMARK 465 ALA G 58 REMARK 465 GLY G 59 REMARK 465 GLY G 60 REMARK 465 LYS G 61 REMARK 465 LYS G 62 REMARK 465 LYS G 63 REMARK 465 ALA B 58 REMARK 465 GLY B 59 REMARK 465 GLY B 60 REMARK 465 LYS B 61 REMARK 465 LYS B 62 REMARK 465 LYS B 63 REMARK 465 ALA F 58 REMARK 465 GLY F 59 REMARK 465 GLY F 60 REMARK 465 LYS F 61 REMARK 465 LYS F 62 REMARK 465 LYS F 63 REMARK 465 ALA H 57 REMARK 465 ALA H 58 REMARK 465 GLY H 59 REMARK 465 GLY H 60 REMARK 465 LYS H 61 REMARK 465 LYS H 62 REMARK 465 LYS H 63 REMARK 465 ALA I 57 REMARK 465 ALA I 58 REMARK 465 GLY I 59 REMARK 465 GLY I 60 REMARK 465 LYS I 61 REMARK 465 LYS I 62 REMARK 465 LYS I 63 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 15 CE NZ REMARK 470 ARG A 17 CD NE CZ NH1 NH2 REMARK 470 LYS A 26 CG CD CE NZ REMARK 470 ARG A 39 CD NE CZ NH1 NH2 REMARK 470 LYS C 15 CE NZ REMARK 470 LYS C 26 CG CD CE NZ REMARK 470 ARG C 39 CD NE CZ NH1 NH2 REMARK 470 ARG E 1 NH2 REMARK 470 LYS E 15 CE NZ REMARK 470 ARG E 17 NE CZ NH1 NH2 REMARK 470 LYS E 26 CG CD CE NZ REMARK 470 ARG E 39 CD NE CZ NH1 NH2 REMARK 470 LYS G 15 CG CD CE NZ REMARK 470 ARG G 17 CD NE CZ NH1 NH2 REMARK 470 LYS G 26 CG CD CE NZ REMARK 470 ARG G 39 CD NE CZ NH1 NH2 REMARK 470 LYS B 15 CE NZ REMARK 470 ARG B 17 CZ NH1 NH2 REMARK 470 LYS B 26 CG CD CE NZ REMARK 470 ARG B 39 CD NE CZ NH1 NH2 REMARK 470 GLU F 7 CG CD OE1 OE2 REMARK 470 LYS F 15 CE NZ REMARK 470 LYS F 26 CG CD CE NZ REMARK 470 ARG F 39 CD NE CZ NH1 NH2 REMARK 470 ALA F 57 CA C O CB REMARK 470 ARG H 1 CZ NH1 NH2 REMARK 470 ARG H 17 CD NE CZ NH1 NH2 REMARK 470 ARG H 39 CD NE CZ NH1 NH2 REMARK 470 LYS I 15 CG CD CE NZ REMARK 470 LYS I 26 CG CD CE NZ REMARK 470 ARG I 39 CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH F 285 O HOH F 317 1.50 REMARK 500 NH1 ARG C 20 O HOH C 242 1.92 REMARK 500 O HOH B 178 O HOH B 198 1.94 REMARK 500 O HOH B 102 O HOH B 113 1.98 REMARK 500 O HOH G 104 O HOH G 133 2.00 REMARK 500 O HOH G 108 O HOH G 213 2.03 REMARK 500 NH1 ARG F 42 O HOH F 319 2.03 REMARK 500 O HOH A 224 O HOH A 232 2.04 REMARK 500 O HOH B 203 O HOH I 229 2.06 REMARK 500 O HOH E 213 O HOH B 199 2.10 REMARK 500 O HOH F 269 O HOH F 319 2.10 REMARK 500 O HOH A 114 O HOH A 150 2.11 REMARK 500 O HOH C 265 O HOH C 299 2.12 REMARK 500 O HOH A 159 O HOH A 256 2.14 REMARK 500 O HOH A 211 O HOH A 223 2.15 REMARK 500 O HOH E 195 O HOH G 229 2.16 REMARK 500 O HOH E 147 O HOH E 175 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH C 304 O HOH E 204 1455 2.10 REMARK 500 O HOH C 273 O HOH I 232 1455 2.10 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN C 44 110.39 -162.31 REMARK 500 ASN E 44 106.09 -161.73 REMARK 500 ASN F 44 110.75 -161.18 REMARK 500 ASN H 44 105.14 -161.92 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 207 DISTANCE = 7.73 ANGSTROMS REMARK 525 HOH A 218 DISTANCE = 8.13 ANGSTROMS REMARK 525 HOH A 224 DISTANCE = 8.98 ANGSTROMS REMARK 525 HOH A 227 DISTANCE = 5.36 ANGSTROMS REMARK 525 HOH A 230 DISTANCE = 5.35 ANGSTROMS REMARK 525 HOH A 231 DISTANCE = 7.02 ANGSTROMS REMARK 525 HOH A 232 DISTANCE = 8.30 ANGSTROMS REMARK 525 HOH B 177 DISTANCE = 5.95 ANGSTROMS REMARK 525 HOH C 316 DISTANCE = 7.36 ANGSTROMS REMARK 525 HOH C 329 DISTANCE = 7.66 ANGSTROMS REMARK 525 HOH C 340 DISTANCE = 6.87 ANGSTROMS REMARK 525 HOH E 187 DISTANCE = 5.71 ANGSTROMS REMARK 525 HOH E 222 DISTANCE = 6.39 ANGSTROMS REMARK 525 HOH E 223 DISTANCE = 5.67 ANGSTROMS REMARK 525 HOH E 234 DISTANCE = 5.41 ANGSTROMS REMARK 525 HOH F 259 DISTANCE = 7.37 ANGSTROMS REMARK 525 HOH F 268 DISTANCE = 5.15 ANGSTROMS REMARK 525 HOH F 272 DISTANCE = 7.41 ANGSTROMS REMARK 525 HOH F 276 DISTANCE = 7.05 ANGSTROMS REMARK 525 HOH F 278 DISTANCE = 6.56 ANGSTROMS REMARK 525 HOH F 286 DISTANCE = 8.12 ANGSTROMS REMARK 525 HOH F 289 DISTANCE = 8.06 ANGSTROMS REMARK 525 HOH F 295 DISTANCE = 5.17 ANGSTROMS REMARK 525 HOH F 297 DISTANCE = 8.00 ANGSTROMS REMARK 525 HOH F 299 DISTANCE = 6.10 ANGSTROMS REMARK 525 HOH F 306 DISTANCE = 5.04 ANGSTROMS REMARK 525 HOH G 184 DISTANCE = 8.36 ANGSTROMS REMARK 525 HOH G 185 DISTANCE = 5.14 ANGSTROMS REMARK 525 HOH G 201 DISTANCE = 5.78 ANGSTROMS REMARK 525 HOH G 202 DISTANCE = 7.79 ANGSTROMS REMARK 525 HOH G 204 DISTANCE = 6.28 ANGSTROMS REMARK 525 HOH I 184 DISTANCE = 5.34 ANGSTROMS REMARK 525 HOH I 189 DISTANCE = 6.40 ANGSTROMS REMARK 525 HOH I 204 DISTANCE = 7.81 ANGSTROMS REMARK 525 HOH I 206 DISTANCE = 10.33 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 C 101 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 F 101 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3AUB RELATED DB: PDB REMARK 900 RELATED ID: 3AUC RELATED DB: PDB REMARK 900 RELATED ID: 3AUD RELATED DB: PDB REMARK 900 RELATED ID: 3AUE RELATED DB: PDB REMARK 900 RELATED ID: 3AUG RELATED DB: PDB REMARK 900 RELATED ID: 3AUH RELATED DB: PDB REMARK 900 RELATED ID: 3AUI RELATED DB: PDB REMARK 999 REMARK 999 SEQUENCE REMARK 999 THE SEQUENCE DATABASE REFERENCES FOR THIS PROTEIN DOES NOT REMARK 999 CURRENTLY EXIST. DBREF 3WNY A 1 63 PDB 3WNY 3WNY 1 63 DBREF 3WNY C 1 63 PDB 3WNY 3WNY 1 63 DBREF 3WNY E 1 63 PDB 3WNY 3WNY 1 63 DBREF 3WNY G 1 63 PDB 3WNY 3WNY 1 63 DBREF 3WNY B 1 63 PDB 3WNY 3WNY 1 63 DBREF 3WNY F 1 63 PDB 3WNY 3WNY 1 63 DBREF 3WNY H 1 63 PDB 3WNY 3WNY 1 63 DBREF 3WNY I 1 63 PDB 3WNY 3WNY 1 63 SEQRES 1 A 63 ARG PRO ALA PHE CYS LEU GLU PRO PRO TYR ALA GLY PRO SEQRES 2 A 63 GLY LYS ALA ARG ILE ILE ARG TYR PHE TYR ASN ALA LYS SEQRES 3 A 63 ALA GLY ALA ALA GLN ALA PHE VAL TYR GLY GLY VAL ARG SEQRES 4 A 63 ALA LYS ARG ASN ASN PHE ALA SER ALA ALA ASP ALA LEU SEQRES 5 A 63 ALA ALA CYS ALA ALA ALA GLY GLY LYS LYS LYS SEQRES 1 C 63 ARG PRO ALA PHE CYS LEU GLU PRO PRO TYR ALA GLY PRO SEQRES 2 C 63 GLY LYS ALA ARG ILE ILE ARG TYR PHE TYR ASN ALA LYS SEQRES 3 C 63 ALA GLY ALA ALA GLN ALA PHE VAL TYR GLY GLY VAL ARG SEQRES 4 C 63 ALA LYS ARG ASN ASN PHE ALA SER ALA ALA ASP ALA LEU SEQRES 5 C 63 ALA ALA CYS ALA ALA ALA GLY GLY LYS LYS LYS SEQRES 1 E 63 ARG PRO ALA PHE CYS LEU GLU PRO PRO TYR ALA GLY PRO SEQRES 2 E 63 GLY LYS ALA ARG ILE ILE ARG TYR PHE TYR ASN ALA LYS SEQRES 3 E 63 ALA GLY ALA ALA GLN ALA PHE VAL TYR GLY GLY VAL ARG SEQRES 4 E 63 ALA LYS ARG ASN ASN PHE ALA SER ALA ALA ASP ALA LEU SEQRES 5 E 63 ALA ALA CYS ALA ALA ALA GLY GLY LYS LYS LYS SEQRES 1 G 63 ARG PRO ALA PHE CYS LEU GLU PRO PRO TYR ALA GLY PRO SEQRES 2 G 63 GLY LYS ALA ARG ILE ILE ARG TYR PHE TYR ASN ALA LYS SEQRES 3 G 63 ALA GLY ALA ALA GLN ALA PHE VAL TYR GLY GLY VAL ARG SEQRES 4 G 63 ALA LYS ARG ASN ASN PHE ALA SER ALA ALA ASP ALA LEU SEQRES 5 G 63 ALA ALA CYS ALA ALA ALA GLY GLY LYS LYS LYS SEQRES 1 B 63 ARG PRO ALA PHE CYS LEU GLU PRO PRO TYR ALA GLY PRO SEQRES 2 B 63 GLY LYS ALA ARG ILE ILE ARG TYR PHE TYR ASN ALA LYS SEQRES 3 B 63 ALA GLY ALA ALA GLN ALA PHE VAL TYR GLY GLY VAL ARG SEQRES 4 B 63 ALA LYS ARG ASN ASN PHE ALA SER ALA ALA ASP ALA LEU SEQRES 5 B 63 ALA ALA CYS ALA ALA ALA GLY GLY LYS LYS LYS SEQRES 1 F 63 ARG PRO ALA PHE CYS LEU GLU PRO PRO TYR ALA GLY PRO SEQRES 2 F 63 GLY LYS ALA ARG ILE ILE ARG TYR PHE TYR ASN ALA LYS SEQRES 3 F 63 ALA GLY ALA ALA GLN ALA PHE VAL TYR GLY GLY VAL ARG SEQRES 4 F 63 ALA LYS ARG ASN ASN PHE ALA SER ALA ALA ASP ALA LEU SEQRES 5 F 63 ALA ALA CYS ALA ALA ALA GLY GLY LYS LYS LYS SEQRES 1 H 63 ARG PRO ALA PHE CYS LEU GLU PRO PRO TYR ALA GLY PRO SEQRES 2 H 63 GLY LYS ALA ARG ILE ILE ARG TYR PHE TYR ASN ALA LYS SEQRES 3 H 63 ALA GLY ALA ALA GLN ALA PHE VAL TYR GLY GLY VAL ARG SEQRES 4 H 63 ALA LYS ARG ASN ASN PHE ALA SER ALA ALA ASP ALA LEU SEQRES 5 H 63 ALA ALA CYS ALA ALA ALA GLY GLY LYS LYS LYS SEQRES 1 I 63 ARG PRO ALA PHE CYS LEU GLU PRO PRO TYR ALA GLY PRO SEQRES 2 I 63 GLY LYS ALA ARG ILE ILE ARG TYR PHE TYR ASN ALA LYS SEQRES 3 I 63 ALA GLY ALA ALA GLN ALA PHE VAL TYR GLY GLY VAL ARG SEQRES 4 I 63 ALA LYS ARG ASN ASN PHE ALA SER ALA ALA ASP ALA LEU SEQRES 5 I 63 ALA ALA CYS ALA ALA ALA GLY GLY LYS LYS LYS HET SO4 C 101 5 HET SO4 F 101 5 HETNAM SO4 SULFATE ION FORMUL 9 SO4 2(O4 S 2-) FORMUL 11 HOH *1056(H2 O) HELIX 1 1 PRO A 2 GLU A 7 5 6 HELIX 2 2 SER A 47 ALA A 56 1 10 HELIX 3 3 PRO C 2 GLU C 7 5 6 HELIX 4 4 SER C 47 CYS C 55 1 9 HELIX 5 5 PRO E 2 GLU E 7 5 6 HELIX 6 6 SER E 47 ALA E 56 1 10 HELIX 7 7 PRO G 2 GLU G 7 5 6 HELIX 8 8 SER G 47 ALA G 56 1 10 HELIX 9 9 PRO B 2 GLU B 7 5 6 HELIX 10 10 SER B 47 ALA B 56 1 10 HELIX 11 11 PRO F 2 GLU F 7 5 6 HELIX 12 12 SER F 47 CYS F 55 1 9 HELIX 13 13 PRO H 2 GLU H 7 5 6 HELIX 14 14 SER H 47 ALA H 56 1 10 HELIX 15 15 PRO I 2 GLU I 7 5 6 HELIX 16 16 SER I 47 ALA I 56 1 10 SHEET 1 A 2 ILE A 18 ASN A 24 0 SHEET 2 A 2 ALA A 29 TYR A 35 -1 O TYR A 35 N ILE A 18 SHEET 1 B 2 ILE C 18 ASN C 24 0 SHEET 2 B 2 ALA C 29 TYR C 35 -1 O TYR C 35 N ILE C 18 SHEET 1 C 2 ILE E 18 ASN E 24 0 SHEET 2 C 2 ALA E 29 TYR E 35 -1 O TYR E 35 N ILE E 18 SHEET 1 D 2 ILE G 18 ASN G 24 0 SHEET 2 D 2 ALA G 29 TYR G 35 -1 O TYR G 35 N ILE G 18 SHEET 1 E 2 ILE B 18 ASN B 24 0 SHEET 2 E 2 ALA B 29 TYR B 35 -1 O TYR B 35 N ILE B 18 SHEET 1 F 2 ILE F 18 ASN F 24 0 SHEET 2 F 2 ALA F 29 TYR F 35 -1 O ALA F 29 N ASN F 24 SHEET 1 G 2 ILE H 18 ASN H 24 0 SHEET 2 G 2 ALA H 29 TYR H 35 -1 O TYR H 35 N ILE H 18 SHEET 1 H 2 ILE I 18 ASN I 24 0 SHEET 2 H 2 ALA I 29 TYR I 35 -1 O TYR I 35 N ILE I 18 SSBOND 1 CYS A 5 CYS A 55 1555 1555 2.04 SSBOND 2 CYS C 5 CYS C 55 1555 1555 2.03 SSBOND 3 CYS E 5 CYS E 55 1555 1555 2.04 SSBOND 4 CYS G 5 CYS G 55 1555 1555 2.04 SSBOND 5 CYS B 5 CYS B 55 1555 1555 2.05 SSBOND 6 CYS F 5 CYS F 55 1555 1555 2.03 SSBOND 7 CYS H 5 CYS H 55 1555 1555 2.04 SSBOND 8 CYS I 5 CYS I 55 1555 1555 2.04 CISPEP 1 ALA B 56 ALA B 57 0 -28.80 SITE 1 AC1 7 ARG C 20 TYR C 35 ALA C 40 HOH C 260 SITE 2 AC1 7 HOH C 270 HOH C 331 HOH C 334 SITE 1 AC2 6 ARG F 20 TYR F 35 ALA F 40 HOH F 248 SITE 2 AC2 6 HOH F 263 HOH F 309 CRYST1 54.878 71.440 57.245 90.00 92.09 90.00 P 1 21 1 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018222 0.000000 0.000665 0.00000 SCALE2 0.000000 0.013998 0.000000 0.00000 SCALE3 0.000000 0.000000 0.017480 0.00000