HEADER HYDROLASE 28-JAN-14 3WQN TITLE CRYSTAL STRUCTURE OF RV3378C_Y51F WITH TPP COMPND MOL_ID: 1; COMPND 2 MOLECULE: DITERPENE SYNTHASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: ISOTUBERCULOSINOL SYNTHASE, NOSYBERKOL SYNTHASE, COMPND 5 TUBERCULOSINOL SYNTHASE; COMPND 6 EC: 3.1.7.9, 3.1.7.8; COMPND 7 ENGINEERED: YES; COMPND 8 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MYCOBACTERIUM TUBERCULOSIS; SOURCE 3 ORGANISM_TAXID: 1773; SOURCE 4 STRAIN: H37RV; SOURCE 5 GENE: RV3378C, MT3488; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS DITERPENE SYNTHASE, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR H.C.CHAN,X.FENG,T.P.KO,C.H.HUANG,Y.HU,Y.ZHENG,S.BOGUE,C.NAKANO, AUTHOR 2 T.HOSHINO,L.ZHANG,P.LV,W.LIU,D.C.CRICK,P.H.LIANG,A.H.WANG, AUTHOR 3 E.OLDFIELD,R.T.GUO REVDAT 4 20-MAR-24 3WQN 1 REMARK SEQADV REVDAT 3 14-MAR-18 3WQN 1 COMPND REMARK HET HETNAM REVDAT 3 2 1 FORMUL ATOM REVDAT 2 01-OCT-14 3WQN 1 JRNL REVDAT 1 26-FEB-14 3WQN 0 JRNL AUTH H.C.CHAN,X.FENG,T.P.KO,C.H.HUANG,Y.HU,Y.ZHENG,S.BOGUE, JRNL AUTH 2 C.NAKANO,T.HOSHINO,L.ZHANG,P.LV,W.LIU,D.C.CRICK,P.H.LIANG, JRNL AUTH 3 A.H.WANG,E.OLDFIELD,R.T.GUO JRNL TITL STRUCTURE AND INHIBITION OF TUBERCULOSINOL SYNTHASE AND JRNL TITL 2 DECAPRENYL DIPHOSPHATE SYNTHASE FROM MYCOBACTERIUM JRNL TITL 3 TUBERCULOSIS. JRNL REF J.AM.CHEM.SOC. V. 136 2892 2014 JRNL REFN ISSN 0002-7863 JRNL PMID 24475925 JRNL DOI 10.1021/JA413127V REMARK 2 REMARK 2 RESOLUTION. 2.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.2 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 25.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 2.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : 10756 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING SET) : 0.240 REMARK 3 FREE R VALUE : 0.261 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.70 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.80 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.3420 REMARK 3 BIN FREE R VALUE : 0.3650 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2365 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 39 REMARK 3 SOLVENT ATOMS : 105 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : NULL REMARK 3 BOND ANGLES (DEGREES) : NULL REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3WQN COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 06-FEB-14. REMARK 100 THE DEPOSITION ID IS D_1000096670. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-NOV-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSRRC REMARK 200 BEAMLINE : BL13C1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 11190 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.700 REMARK 200 RESOLUTION RANGE LOW (A) : 25.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 7.200 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.80 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.8 REMARK 200 DATA REDUNDANCY IN SHELL : 7.70 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 55.35 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.75 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 33.18000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 53.22700 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 53.22700 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 49.77000 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 53.22700 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 53.22700 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 16.59000 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 53.22700 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 53.22700 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 49.77000 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 53.22700 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 53.22700 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 16.59000 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 33.18000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 8270 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 26390 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -73.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ASN A 45 REMARK 465 PRO A 46 REMARK 465 GLN A 47 REMARK 465 TYR A 48 REMARK 465 ASP A 49 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OXT GLY A 296 OXT GLY A 296 7555 1.84 REMARK 500 OD2 ASP A 50 OD2 ASP A 50 7556 2.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS A 41 37.56 -74.07 REMARK 500 PHE A 51 -102.45 69.65 REMARK 500 LEU A 84 64.80 -68.12 REMARK 500 ARG A 86 -29.63 76.16 REMARK 500 GLU A 115 69.79 39.72 REMARK 500 ASP A 123 37.39 -98.30 REMARK 500 ALA A 166 -73.33 -28.98 REMARK 500 LEU A 217 -1.01 62.33 REMARK 500 SER A 260 6.15 -60.57 REMARK 500 TYR A 274 -60.04 -98.67 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 410 DISTANCE = 8.11 ANGSTROMS REMARK 525 HOH A 412 DISTANCE = 6.95 ANGSTROMS REMARK 525 HOH A 417 DISTANCE = 6.82 ANGSTROMS REMARK 525 HOH A 419 DISTANCE = 7.30 ANGSTROMS REMARK 525 HOH A 420 DISTANCE = 6.84 ANGSTROMS REMARK 525 HOH A 433 DISTANCE = 6.60 ANGSTROMS REMARK 525 HOH A 434 DISTANCE = 9.49 ANGSTROMS REMARK 525 HOH A 435 DISTANCE = 8.26 ANGSTROMS REMARK 525 HOH A 436 DISTANCE = 5.81 ANGSTROMS REMARK 525 HOH A 438 DISTANCE = 7.40 ANGSTROMS REMARK 525 HOH A 439 DISTANCE = 5.83 ANGSTROMS REMARK 525 HOH A 443 DISTANCE = 9.74 ANGSTROMS REMARK 525 HOH A 444 DISTANCE = 8.60 ANGSTROMS REMARK 525 HOH A 445 DISTANCE = 8.61 ANGSTROMS REMARK 525 HOH A 453 DISTANCE = 6.19 ANGSTROMS REMARK 525 HOH A 455 DISTANCE = 7.90 ANGSTROMS REMARK 525 HOH A 456 DISTANCE = 8.10 ANGSTROMS REMARK 525 HOH A 460 DISTANCE = 7.20 ANGSTROMS REMARK 525 HOH A 467 DISTANCE = 9.61 ANGSTROMS REMARK 525 HOH A 468 DISTANCE = 5.83 ANGSTROMS REMARK 525 HOH A 469 DISTANCE = 8.75 ANGSTROMS REMARK 525 HOH A 473 DISTANCE = 7.98 ANGSTROMS REMARK 525 HOH A 474 DISTANCE = 5.82 ANGSTROMS REMARK 525 HOH A 475 DISTANCE = 7.04 ANGSTROMS REMARK 525 HOH A 476 DISTANCE = 6.04 ANGSTROMS REMARK 525 HOH A 480 DISTANCE = 8.97 ANGSTROMS REMARK 525 HOH A 484 DISTANCE = 5.98 ANGSTROMS REMARK 525 HOH A 488 DISTANCE = 6.81 ANGSTROMS REMARK 525 HOH A 493 DISTANCE = 6.19 ANGSTROMS REMARK 525 HOH A 494 DISTANCE = 6.25 ANGSTROMS REMARK 525 HOH A 497 DISTANCE = 9.73 ANGSTROMS REMARK 525 HOH A 501 DISTANCE = 6.72 ANGSTROMS REMARK 525 HOH A 502 DISTANCE = 5.97 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 9AX A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 A 303 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3WQK RELATED DB: PDB REMARK 900 RELATED ID: 3WQL RELATED DB: PDB REMARK 900 RELATED ID: 3WQM RELATED DB: PDB DBREF 3WQN A 1 296 UNP O50407 TUBOL_MYCTU 1 296 SEQADV 3WQN ALA A 0 UNP O50407 EXPRESSION TAG SEQADV 3WQN PHE A 51 UNP O50407 TYR 51 ENGINEERED MUTATION SEQRES 1 A 297 ALA MET ASN LEU VAL SER GLU LYS GLU PHE LEU ASP LEU SEQRES 2 A 297 PRO LEU VAL SER VAL ALA GLU ILE VAL ARG CYS ARG GLY SEQRES 3 A 297 PRO LYS VAL SER VAL PHE PRO PHE ASP GLY THR ARG ARG SEQRES 4 A 297 TRP PHE HIS LEU GLU CYS ASN PRO GLN TYR ASP ASP PHE SEQRES 5 A 297 GLN GLN ALA ALA LEU ARG GLN SER ILE ARG ILE LEU LYS SEQRES 6 A 297 MET LEU PHE GLU HIS GLY ILE GLU THR VAL ILE SER PRO SEQRES 7 A 297 ILE PHE SER ASP ASP LEU LEU ASP ARG GLY ASP ARG TYR SEQRES 8 A 297 ILE VAL GLN ALA LEU GLU GLY MET ALA LEU LEU ALA ASN SEQRES 9 A 297 ASP GLU GLU ILE LEU SER PHE TYR LYS GLU HIS GLU VAL SEQRES 10 A 297 HIS VAL LEU PHE TYR GLY ASP TYR LYS LYS ARG LEU PRO SEQRES 11 A 297 SER THR ALA GLN GLY ALA ALA VAL VAL LYS SER PHE ASP SEQRES 12 A 297 ASP LEU THR ILE SER THR SER SER ASN THR GLU HIS ARG SEQRES 13 A 297 LEU CYS PHE GLY VAL PHE GLY ASN ASP ALA ALA GLU SER SEQRES 14 A 297 VAL ALA GLN PHE SER ILE SER TRP ASN GLU THR HIS GLY SEQRES 15 A 297 LYS PRO PRO THR ARG ARG GLU ILE ILE GLU GLY TYR TYR SEQRES 16 A 297 GLY GLU TYR VAL ASP LYS ALA ASP MET PHE ILE GLY PHE SEQRES 17 A 297 GLY ARG PHE SER THR PHE ASP PHE PRO LEU LEU SER SER SEQRES 18 A 297 GLY LYS THR SER LEU TYR PHE THR VAL ALA PRO SER TYR SEQRES 19 A 297 TYR MET THR GLU THR THR LEU ARG ARG ILE LEU TYR ASP SEQRES 20 A 297 HIS ILE TYR LEU ARG HIS PHE ARG PRO LYS PRO ASP TYR SEQRES 21 A 297 SER ALA MET SER ALA ASP GLN LEU ASN VAL LEU ARG ASN SEQRES 22 A 297 ARG TYR ARG ALA GLN PRO ASP ARG VAL PHE GLY VAL GLY SEQRES 23 A 297 CYS VAL HIS ASP GLY ILE TRP PHE ALA GLU GLY HET PO4 A 302 5 HET PO4 A 303 5 HET 9AX A 301 29 HETNAM PO4 PHOSPHATE ION HETNAM 9AX (2E)-3-METHYL-5-[(1R,2S,8AS)-1,2,5,5-TETRAMETHYL-1,2,3, HETNAM 2 9AX 5,6,7,8,8A-OCTAHYDRONAPHTHALEN-1-YL]PENT-2-EN-1-YL HETNAM 3 9AX TRIHYDROGEN DIPHOSPHATE FORMUL 2 PO4 2(O4 P 3-) FORMUL 4 9AX C20 H36 O7 P2 FORMUL 5 HOH *105(H2 O) HELIX 1 1 SER A 5 LEU A 12 1 8 HELIX 2 2 PRO A 13 GLY A 25 1 13 HELIX 3 3 GLY A 35 HIS A 41 1 7 HELIX 4 4 PHE A 51 HIS A 69 1 19 HELIX 5 5 SER A 80 LEU A 84 5 5 HELIX 6 6 GLY A 87 ASP A 104 1 18 HELIX 7 7 GLU A 105 HIS A 114 1 10 HELIX 8 8 ASP A 123 LEU A 128 1 6 HELIX 9 9 THR A 131 THR A 148 1 18 HELIX 10 10 ALA A 165 GLY A 181 1 17 HELIX 11 11 THR A 185 GLY A 195 1 11 HELIX 12 12 PRO A 231 MET A 235 5 5 HELIX 13 13 THR A 236 LEU A 250 1 15 HELIX 14 14 ASP A 258 MET A 262 5 5 HELIX 15 15 ASP A 265 ALA A 276 1 12 SHEET 1 A 6 VAL A 116 TYR A 121 0 SHEET 2 A 6 HIS A 154 VAL A 160 1 O LEU A 156 N LEU A 119 SHEET 3 A 6 THR A 73 PHE A 79 1 N SER A 76 O CYS A 157 SHEET 4 A 6 VAL A 28 VAL A 30 1 N SER A 29 O ILE A 75 SHEET 5 A 6 MET A 203 PHE A 207 1 O MET A 203 N VAL A 30 SHEET 6 A 6 SER A 224 THR A 228 1 O TYR A 226 N GLY A 206 SHEET 1 B 2 GLY A 285 HIS A 288 0 SHEET 2 B 2 ILE A 291 ALA A 294 -1 O PHE A 293 N CYS A 286 CISPEP 1 GLY A 25 PRO A 26 0 0.12 CISPEP 2 ARG A 254 PRO A 255 0 0.08 SITE 1 AC1 13 GLY A 35 THR A 36 ARG A 37 ARG A 38 SITE 2 AC1 13 ALA A 55 LEU A 56 SER A 59 ILE A 78 SITE 3 AC1 13 PHE A 79 TYR A 90 GLY A 97 TYR A 233 SITE 4 AC1 13 HOH A 451 SITE 1 AC2 7 ASP A 81 ASN A 163 ASP A 214 SER A 220 SITE 2 AC2 7 GLY A 221 HOH A 463 HOH A 464 SITE 1 AC3 7 ARG A 209 SER A 211 GLY A 221 LYS A 222 SITE 2 AC3 7 THR A 223 SER A 224 ARG A 251 CRYST1 106.454 106.454 66.360 90.00 90.00 90.00 P 43 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009394 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009394 0.000000 0.00000 SCALE3 0.000000 0.000000 0.015069 0.00000