HEADER HYDROLASE 25-FEB-14 3WRF TITLE THE CRYSTAL STRUCTURE OF NATIVE HYPBA1 FROM BIFIDOBACTERIUM LONGUM JCM TITLE 2 1217 COMPND MOL_ID: 1; COMPND 2 MOLECULE: NON-REDUCING END BETA-L-ARABINOFURANOSIDASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: BETA-L-ARABINOFURANOSIDASE HYPBA1; COMPND 5 EC: 3.2.1.185; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BIFIDOBACTERIUM LONGUM; SOURCE 3 ORGANISM_TAXID: 565042; SOURCE 4 STRAIN: ATCC 15707; SOURCE 5 GENE: HYPBA1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET-29A KEYWDS GLYCOSIDE HYDROLASE, ARABINOFURANOSE, B-L-ARABINOFURANOSIDASE, ONE KEYWDS 2 (A11/A6)-BARREL FOLD, TWO B-JELLYROLL FOLDS, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR C.H.HUANG,Z.ZHU,Y.S.CHENG,H.C.CHAN,T.P.KO,C.C.CHEN,I.WANG,M.R.HO, AUTHOR 2 S.T.HSU,Y.F.ZENG,Y.N.HUANG,J.R.LIU,R.T.GUO REVDAT 2 06-NOV-24 3WRF 1 LINK REVDAT 1 03-SEP-14 3WRF 0 JRNL AUTH C.H.HUANG,Z.ZHU,Y.S.CHENG,H.C.CHAN,T.P.KO,C.C.CHEN,I.WANG, JRNL AUTH 2 M.R.HO,S.T.HSU,Y.F.ZENG,Y.N.HUANG,J.R.LIU,R.T.GUO JRNL TITL STRUCTURE AND CATALYTIC MECHANISM OF A GLYCOSIDE HYDROLASE JRNL TITL 2 FAMILY-127 BETA-L-ARABINOFURANOSIDASE (HYPBA1) JRNL REF J BIOPROCESS BIOTECH V. 4 00171 2014 JRNL REFN ESSN 2155-9821 JRNL DOI 10.4172/2155-9821.1000171 REMARK 2 REMARK 2 RESOLUTION. 2.25 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.25 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 25.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 96.6 REMARK 3 NUMBER OF REFLECTIONS : 40022 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.215 REMARK 3 FREE R VALUE : 0.252 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.800 REMARK 3 FREE R VALUE TEST SET COUNT : 2006 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.25 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.33 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.3000 REMARK 3 BIN FREE R VALUE : 0.3070 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : 178 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5018 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 279 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 44.14 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -7.09900 REMARK 3 B22 (A**2) : -7.09900 REMARK 3 B33 (A**2) : 14.19800 REMARK 3 B12 (A**2) : -5.76200 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : NULL REMARK 3 BOND ANGLES (DEGREES) : NULL REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 1.254 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 2.080 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 1.966 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 2.850 ; 2.500 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : 43.63 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3WRF COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 28-FEB-14. REMARK 100 THE DEPOSITION ID IS D_1000096698. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-DEC-13 REMARK 200 TEMPERATURE (KELVIN) : NULL REMARK 200 PH : 7.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSRRC REMARK 200 BEAMLINE : BL13B1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 41517 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.250 REMARK 200 RESOLUTION RANGE LOW (A) : 25.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 7.100 REMARK 200 R MERGE (I) : 0.08100 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 23.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.25 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.33 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 7.10 REMARK 200 R MERGE FOR SHELL (I) : 0.49200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 57.05 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.86 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.4M AMMONIUM ACETATE, 18%(W/V) REMARK 280 POLYETHYLENE GLYCOL 3350, PH 7.6, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+1/3 REMARK 290 6555 -X,-X+Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 169.75200 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 84.87600 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 84.87600 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 169.75200 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5720 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 44880 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -6.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 0.866025 0.000000 0.00000 REMARK 350 BIOMT2 2 0.866025 0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 708 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 THR A 35 REMARK 465 THR A 36 REMARK 465 VAL A 37 REMARK 465 PRO A 38 REMARK 465 ASP A 39 REMARK 465 ASP A 40 REMARK 465 PRO A 41 REMARK 465 ALA A 42 REMARK 465 GLY A 43 REMARK 465 ASN A 44 REMARK 465 GLN A 45 REMARK 465 LEU A 46 REMARK 465 ALA A 47 REMARK 465 ASP A 48 REMARK 465 SER A 49 REMARK 465 LYS A 50 REMARK 465 PHE A 413 REMARK 465 GLY A 414 REMARK 465 CYS A 415 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 20 -63.61 -124.11 REMARK 500 ASP A 31 -33.88 72.54 REMARK 500 GLU A 32 -36.80 -38.88 REMARK 500 ILE A 33 -94.24 -102.40 REMARK 500 ASP A 119 91.17 -170.89 REMARK 500 HIS A 189 72.37 -107.78 REMARK 500 GLU A 196 -42.48 174.56 REMARK 500 ASN A 239 74.51 34.21 REMARK 500 ASP A 246 48.38 36.08 REMARK 500 PHE A 249 -169.91 -65.43 REMARK 500 ARG A 307 -11.64 -140.32 REMARK 500 THR A 325 -88.45 -125.05 REMARK 500 ASN A 371 -86.03 -141.86 REMARK 500 ASP A 411 -74.50 -80.83 REMARK 500 ALA A 450 129.23 -39.64 REMARK 500 SER A 501 91.66 -162.77 REMARK 500 ARG A 647 -149.97 -127.74 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3WRE RELATED DB: PDB REMARK 900 THE SAME PROTEIN WITH ZINC ION REMARK 900 RELATED ID: 3WRG RELATED DB: PDB REMARK 900 THE SAME PROTEIN IN COMPLEX WITH L-ARABINOSE DBREF 3WRF A 1 658 UNP E8MGH8 HYBA1_BIFL2 1 658 SEQRES 1 A 658 MSE ASN VAL THR ILE THR SER PRO PHE TRP LYS ARG ARG SEQRES 2 A 658 ARG ASP GLN ILE VAL GLU SER VAL ILE PRO TYR GLN TRP SEQRES 3 A 658 GLY VAL MSE ASN ASP GLU ILE ASP THR THR VAL PRO ASP SEQRES 4 A 658 ASP PRO ALA GLY ASN GLN LEU ALA ASP SER LYS SER HIS SEQRES 5 A 658 ALA VAL ALA ASN LEU LYS VAL ALA ALA GLY GLU LEU ASP SEQRES 6 A 658 ASP GLU PHE HIS GLY MSE VAL PHE GLN ASP SER ASP VAL SEQRES 7 A 658 TYR LYS TRP LEU GLU GLU ALA ALA TYR ALA LEU ALA TYR SEQRES 8 A 658 HIS PRO ASP PRO GLU LEU LYS ALA LEU CYS ASP ARG THR SEQRES 9 A 658 VAL ASP LEU ILE ALA ARG ALA GLN GLN SER ASP GLY TYR SEQRES 10 A 658 LEU ASP THR PRO TYR GLN ILE LYS SER GLY VAL TRP ALA SEQRES 11 A 658 ASP ARG PRO ARG PHE SER LEU ILE GLN GLN SER HIS GLU SEQRES 12 A 658 MSE TYR VAL MSE GLY HIS TYR ILE GLU ALA ALA VAL ALA SEQRES 13 A 658 TYR HIS GLN VAL THR GLY ASN GLU GLN ALA LEU GLU VAL SEQRES 14 A 658 ALA LYS LYS MSE ALA ASP CYS LEU ASP ALA ASN PHE GLY SEQRES 15 A 658 PRO GLU GLU GLY LYS ILE HIS GLY ALA ASP GLY HIS PRO SEQRES 16 A 658 GLU ILE GLU LEU ALA LEU ALA LYS LEU TYR GLU GLU THR SEQRES 17 A 658 GLY GLU LYS ARG TYR LEU THR LEU SER GLN TYR LEU ILE SEQRES 18 A 658 ASP VAL ARG GLY GLN ASP PRO GLN PHE TYR ALA LYS GLN SEQRES 19 A 658 LEU LYS ALA MSE ASN GLY ASP ASN ILE PHE HIS ASP LEU SEQRES 20 A 658 GLY PHE TYR LYS PRO THR TYR PHE GLN ALA ALA GLU PRO SEQRES 21 A 658 VAL ARG ASP GLN GLN THR ALA ASP GLY HIS ALA VAL ARG SEQRES 22 A 658 VAL GLY TYR LEU CYS THR GLY VAL ALA HIS VAL GLY ARG SEQRES 23 A 658 LEU LEU GLY ASP GLN GLY LEU ILE ASP THR ALA LYS ARG SEQRES 24 A 658 PHE TRP LYS ASN ILE VAL THR ARG ARG MSE TYR VAL THR SEQRES 25 A 658 GLY ALA ILE GLY SER THR HIS VAL GLY GLU SER PHE THR SEQRES 26 A 658 TYR ASP TYR ASP LEU PRO ASN ASP THR MSE TYR GLY GLU SEQRES 27 A 658 THR CYS ALA SER VAL ALA MSE SER MSE PHE ALA GLN GLN SEQRES 28 A 658 MSE LEU ASP LEU GLU PRO LYS GLY GLU TYR ALA ASP VAL SEQRES 29 A 658 LEU GLU LYS GLU LEU PHE ASN GLY SER ILE ALA GLY ILE SEQRES 30 A 658 SER LEU ASP GLY LYS GLN TYR TYR TYR VAL ASN ALA LEU SEQRES 31 A 658 GLU THR THR PRO ASP GLY LEU ASP ASN PRO ASP ARG HIS SEQRES 32 A 658 HIS VAL LEU SER HIS ARG VAL ASP TRP PHE GLY CYS ALA SEQRES 33 A 658 CYS CYS PRO ALA ASN ILE ALA ARG LEU ILE ALA SER VAL SEQRES 34 A 658 ASP ARG TYR ILE TYR THR GLU ARG ASP GLY GLY LYS THR SEQRES 35 A 658 VAL LEU SER HIS GLN PHE ILE ALA ASN THR ALA GLU PHE SEQRES 36 A 658 ALA SER GLY LEU THR VAL GLU GLN ARG SER ASN PHE PRO SEQRES 37 A 658 TRP ASP GLY HIS VAL GLU TYR THR VAL SER LEU PRO ALA SEQRES 38 A 658 SER ALA THR ASP SER SER VAL ARG PHE GLY LEU ARG ILE SEQRES 39 A 658 PRO GLY TRP SER ARG GLY SER TYR THR LEU THR VAL ASN SEQRES 40 A 658 GLY LYS PRO ALA VAL GLY SER LEU GLU ASP GLY PHE VAL SEQRES 41 A 658 TYR LEU VAL VAL ASN ALA GLY ASP THR LEU GLU ILE ALA SEQRES 42 A 658 LEU GLU LEU ASP MSE SER VAL LYS PHE VAL ARG ALA ASN SEQRES 43 A 658 SER ARG VAL ARG SER ASP ALA GLY GLN VAL ALA VAL MSE SEQRES 44 A 658 ARG GLY PRO LEU VAL TYR CYS ALA GLU GLN VAL ASP ASN SEQRES 45 A 658 PRO GLY ASP LEU TRP ASN TYR ARG LEU ALA ASP GLY VAL SEQRES 46 A 658 THR GLY ALA ASP ALA ALA VAL ALA PHE GLN ALA ASP LEU SEQRES 47 A 658 LEU GLY GLY VAL ASP THR VAL ASP LEU PRO ALA VAL ARG SEQRES 48 A 658 GLU HIS ALA ASP GLU ASP ASP ALA PRO LEU TYR VAL ASP SEQRES 49 A 658 ALA ASP GLU PRO ARG ALA GLY GLU PRO ALA THR LEU ARG SEQRES 50 A 658 LEU VAL PRO TYR TYR SER TRP ALA ASN ARG GLU ILE GLY SEQRES 51 A 658 GLU MSE ARG VAL PHE GLN ARG ARG MODRES 3WRF MSE A 1 MET SELENOMETHIONINE MODRES 3WRF MSE A 29 MET SELENOMETHIONINE MODRES 3WRF MSE A 71 MET SELENOMETHIONINE MODRES 3WRF MSE A 144 MET SELENOMETHIONINE MODRES 3WRF MSE A 147 MET SELENOMETHIONINE MODRES 3WRF MSE A 173 MET SELENOMETHIONINE MODRES 3WRF MSE A 238 MET SELENOMETHIONINE MODRES 3WRF MSE A 309 MET SELENOMETHIONINE MODRES 3WRF MSE A 335 MET SELENOMETHIONINE MODRES 3WRF MSE A 345 MET SELENOMETHIONINE MODRES 3WRF MSE A 347 MET SELENOMETHIONINE MODRES 3WRF MSE A 352 MET SELENOMETHIONINE MODRES 3WRF MSE A 538 MET SELENOMETHIONINE MODRES 3WRF MSE A 559 MET SELENOMETHIONINE MODRES 3WRF MSE A 652 MET SELENOMETHIONINE HET MSE A 1 8 HET MSE A 29 8 HET MSE A 71 8 HET MSE A 144 8 HET MSE A 147 8 HET MSE A 173 8 HET MSE A 238 8 HET MSE A 309 8 HET MSE A 335 8 HET MSE A 345 8 HET MSE A 347 8 HET MSE A 352 8 HET MSE A 538 8 HET MSE A 559 8 HET MSE A 652 8 HETNAM MSE SELENOMETHIONINE FORMUL 1 MSE 15(C5 H11 N O2 SE) FORMUL 2 HOH *279(H2 O) HELIX 1 1 SER A 7 SER A 20 1 14 HELIX 2 2 SER A 20 ASN A 30 1 11 HELIX 3 3 HIS A 52 ALA A 61 1 10 HELIX 4 4 GLN A 74 HIS A 92 1 19 HELIX 5 5 ASP A 94 GLN A 112 1 19 HELIX 6 6 ASP A 119 LYS A 125 1 7 HELIX 7 7 SER A 126 ARG A 132 5 7 HELIX 8 8 HIS A 142 GLY A 162 1 21 HELIX 9 9 ASN A 163 PHE A 181 1 19 HELIX 10 10 GLU A 196 GLY A 209 1 14 HELIX 11 11 GLU A 210 ARG A 224 1 15 HELIX 12 12 GLN A 229 MSE A 238 1 10 HELIX 13 13 HIS A 270 GLY A 289 1 20 HELIX 14 14 ASP A 290 ARG A 308 1 19 HELIX 15 15 HIS A 319 SER A 323 5 5 HELIX 16 16 GLU A 338 GLU A 356 1 19 HELIX 17 17 LYS A 358 ASN A 371 1 14 HELIX 18 18 SER A 373 ILE A 377 5 5 HELIX 19 19 THR A 393 ASN A 399 5 7 HELIX 20 20 PRO A 419 ALA A 427 1 9 HELIX 21 21 SER A 428 TYR A 432 5 5 HELIX 22 22 PRO A 495 ARG A 499 5 5 HELIX 23 23 ASP A 575 TRP A 577 5 3 HELIX 24 24 THR A 586 ALA A 590 5 5 HELIX 25 25 TYR A 642 TRP A 644 5 3 SHEET 1 A 7 ASN A 2 ILE A 5 0 SHEET 2 A 7 ASN A 451 GLU A 454 -1 O THR A 452 N THR A 4 SHEET 3 A 7 THR A 460 ARG A 464 -1 O GLN A 463 N ASN A 451 SHEET 4 A 7 HIS A 472 SER A 478 -1 O SER A 478 N THR A 460 SHEET 5 A 7 THR A 529 GLU A 535 -1 O LEU A 530 N VAL A 477 SHEET 6 A 7 THR A 503 VAL A 506 -1 N THR A 503 O GLU A 535 SHEET 7 A 7 LYS A 509 PRO A 510 -1 O LYS A 509 N VAL A 506 SHEET 1 B 6 GLU A 391 THR A 392 0 SHEET 2 B 6 MSE A 652 ARG A 653 -1 O MSE A 652 N THR A 392 SHEET 3 B 6 LEU A 563 GLU A 568 -1 N ALA A 567 O ARG A 653 SHEET 4 B 6 GLY A 631 PRO A 640 -1 O VAL A 639 N CYS A 566 SHEET 5 B 6 VAL A 602 GLU A 612 -1 N ALA A 609 O ALA A 634 SHEET 6 B 6 ALA A 591 GLN A 595 -1 N GLN A 595 O VAL A 602 SHEET 1 C 6 ALA A 591 GLN A 595 0 SHEET 2 C 6 VAL A 602 GLU A 612 -1 O VAL A 602 N GLN A 595 SHEET 3 C 6 TYR A 579 LEU A 581 -1 N ARG A 580 O VAL A 610 SHEET 4 C 6 GLN A 656 ARG A 657 1 O ARG A 657 N LEU A 581 SHEET 5 C 6 GLN A 555 ARG A 560 -1 N VAL A 556 O GLN A 656 SHEET 6 C 6 VAL A 540 VAL A 543 -1 N LYS A 541 O MSE A 559 SHEET 1 D 5 GLU A 391 THR A 392 0 SHEET 2 D 5 MSE A 652 ARG A 653 -1 O MSE A 652 N THR A 392 SHEET 3 D 5 LEU A 563 GLU A 568 -1 N ALA A 567 O ARG A 653 SHEET 4 D 5 GLN A 555 ARG A 560 -1 N VAL A 558 O TYR A 565 SHEET 5 D 5 VAL A 540 VAL A 543 -1 N LYS A 541 O MSE A 559 SHEET 1 E 4 TYR A 434 ARG A 437 0 SHEET 2 E 4 THR A 442 SER A 445 -1 O THR A 442 N ARG A 437 SHEET 3 E 4 SER A 487 ARG A 493 1 O GLY A 491 N SER A 445 SHEET 4 E 4 PHE A 519 ASN A 525 -1 O LEU A 522 N PHE A 490 LINK C MSE A 1 N ASN A 2 1555 1555 1.33 LINK C VAL A 28 N MSE A 29 1555 1555 1.33 LINK C MSE A 29 N ASN A 30 1555 1555 1.33 LINK C GLY A 70 N MSE A 71 1555 1555 1.33 LINK C MSE A 71 N VAL A 72 1555 1555 1.33 LINK C GLU A 143 N MSE A 144 1555 1555 1.33 LINK C MSE A 144 N TYR A 145 1555 1555 1.33 LINK C VAL A 146 N MSE A 147 1555 1555 1.33 LINK C MSE A 147 N GLY A 148 1555 1555 1.33 LINK C LYS A 172 N MSE A 173 1555 1555 1.33 LINK C MSE A 173 N ALA A 174 1555 1555 1.33 LINK C ALA A 237 N MSE A 238 1555 1555 1.33 LINK C MSE A 238 N ASN A 239 1555 1555 1.33 LINK C ARG A 308 N MSE A 309 1555 1555 1.33 LINK C MSE A 309 N TYR A 310 1555 1555 1.33 LINK C THR A 334 N MSE A 335 1555 1555 1.33 LINK C MSE A 335 N TYR A 336 1555 1555 1.33 LINK C ALA A 344 N MSE A 345 1555 1555 1.33 LINK C MSE A 345 N SER A 346 1555 1555 1.33 LINK C SER A 346 N MSE A 347 1555 1555 1.33 LINK C MSE A 347 N PHE A 348 1555 1555 1.33 LINK C GLN A 351 N MSE A 352 1555 1555 1.33 LINK C MSE A 352 N LEU A 353 1555 1555 1.33 LINK C ASP A 537 N MSE A 538 1555 1555 1.33 LINK C MSE A 538 N SER A 539 1555 1555 1.33 LINK C VAL A 558 N MSE A 559 1555 1555 1.33 LINK C MSE A 559 N ARG A 560 1555 1555 1.33 LINK C GLU A 651 N MSE A 652 1555 1555 1.33 LINK C MSE A 652 N ARG A 653 1555 1555 1.33 CISPEP 1 PHE A 467 PRO A 468 0 0.07 CRYST1 75.873 75.873 254.628 90.00 90.00 120.00 P 32 2 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013180 0.007609 0.000000 0.00000 SCALE2 0.000000 0.015219 0.000000 0.00000 SCALE3 0.000000 0.000000 0.003927 0.00000 HETATM 1 N MSE A 1 -1.279 35.272 42.806 1.00 50.31 N HETATM 2 CA MSE A 1 -0.916 36.525 42.082 1.00 50.57 C HETATM 3 C MSE A 1 -2.057 37.006 41.196 1.00 49.26 C HETATM 4 O MSE A 1 -2.600 36.239 40.401 1.00 49.04 O HETATM 5 CB MSE A 1 0.323 36.302 41.214 1.00 52.35 C HETATM 6 CG MSE A 1 0.653 37.486 40.314 1.00 54.55 C HETATM 7 SE MSE A 1 2.041 37.119 39.024 1.00 55.44 SE HETATM 8 CE MSE A 1 0.955 36.316 37.640 1.00 56.35 C