HEADER TRANSCRIPTION/DNA 21-APR-14 3WU1 TITLE CRYSTAL STRUCTURE OF THE ETS1-RUNX1-DNA TERNARY COMPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: RUNT-RELATED TRANSCRIPTION FACTOR 1; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 55-177; COMPND 5 SYNONYM: ACUTE MYELOID LEUKEMIA 1 PROTEIN, CORE-BINDING FACTOR COMPND 6 SUBUNIT ALPHA-2, CBF-ALPHA-2, ONCOGENE AML-1, POLYOMAVIRUS ENHANCER- COMPND 7 BINDING PROTEIN 2 ALPHA B SUBUNIT, PEA2-ALPHA B, PEBP2-ALPHA B, SL3-3 COMPND 8 ENHANCER FACTOR 1 ALPHA B SUBUNIT, SL3/AKV CORE-BINDING FACTOR ALPHA COMPND 9 B SUBUNIT; COMPND 10 ENGINEERED: YES; COMPND 11 MOL_ID: 2; COMPND 12 MOLECULE: PROTEIN C-ETS-1; COMPND 13 CHAIN: B; COMPND 14 FRAGMENT: UNP RESIDUES 333-441; COMPND 15 SYNONYM: P54; COMPND 16 ENGINEERED: YES; COMPND 17 MOL_ID: 3; COMPND 18 MOLECULE: DNA (5'-D(*GP*GP*AP*AP*GP*CP*CP*AP*CP*AP*TP*CP*CP*TP*CP*T)- COMPND 19 3'); COMPND 20 CHAIN: C; COMPND 21 ENGINEERED: YES; COMPND 22 MOL_ID: 4; COMPND 23 MOLECULE: DNA (5'-D(*CP*AP*GP*AP*GP*GP*AP*TP*GP*TP*GP*GP*CP*TP*TP*C)- COMPND 24 3'); COMPND 25 CHAIN: D; COMPND 26 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 GENE: AML1, CBFA2, PEBP2AB, RUNX1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET23A; SOURCE 11 MOL_ID: 2; SOURCE 12 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 13 ORGANISM_COMMON: HUMAN; SOURCE 14 ORGANISM_TAXID: 9606; SOURCE 15 GENE: ETS1, EWSR2; SOURCE 16 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 17 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 18 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 19 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 20 EXPRESSION_SYSTEM_PLASMID: PET23A; SOURCE 21 MOL_ID: 3; SOURCE 22 SYNTHETIC: YES; SOURCE 23 MOL_ID: 4; SOURCE 24 SYNTHETIC: YES KEYWDS PROTEIN-DNA COMPLEX, DNA-BINDING, METHYLATION, NUCLEUS, KEYWDS 2 PHOSPHOPROTEIN, TRANSCRIPTION REGULATION, ISOPEPTIDE BOND, PROTO- KEYWDS 3 ONCOGENE, TRANSCRIPTION-DNA COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR T.H.TAHIROV,K.OGATA REVDAT 4 08-NOV-23 3WU1 1 REMARK REVDAT 3 24-AUG-22 3WU1 1 JRNL REVDAT 2 22-NOV-17 3WU1 1 REMARK REVDAT 1 20-AUG-14 3WU1 0 JRNL AUTH M.SHIINA,K.HAMADA,T.INOUE-BUNGO,M.SHIMAMURA,A.UCHIYAMA, JRNL AUTH 2 S.BABA,K.SATO,M.YAMAMOTO,K.OGATA JRNL TITL A NOVEL ALLOSTERIC MECHANISM ON PROTEIN-DNA INTERACTIONS JRNL TITL 2 UNDERLYING THE PHOSPHORYLATION-DEPENDENT REGULATION OF ETS1 JRNL TITL 3 TARGET GENE EXPRESSIONS. JRNL REF J.MOL.BIOL. V. 427 1655 2015 JRNL REFN ESSN 1089-8638 JRNL PMID 25083921 JRNL DOI 10.1016/J.JMB.2014.07.020 REMARK 2 REMARK 2 RESOLUTION. 2.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.78 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 86.9 REMARK 3 NUMBER OF REFLECTIONS : 23807 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING SET) : 0.213 REMARK 3 FREE R VALUE : 0.249 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.200 REMARK 3 FREE R VALUE TEST SET COUNT : 1158 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1836 REMARK 3 NUCLEIC ACID ATOMS : 650 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 138 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 46.23 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.39100 REMARK 3 B22 (A**2) : 1.53000 REMARK 3 B33 (A**2) : -0.13900 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.006 REMARK 3 BOND ANGLES (DEGREES) : 1.330 REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : 38.09 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : DNA-RNA_REP.PARAM REMARK 3 PARAMETER FILE 3 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 4 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 TOPOLOGY FILE 2 : NULL REMARK 3 TOPOLOGY FILE 3 : NULL REMARK 3 TOPOLOGY FILE 4 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3WU1 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 22-MAY-14. REMARK 100 THE DEPOSITION ID IS D_1000096791. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 25-MAY-01 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SPRING-8 REMARK 200 BEAMLINE : BL45PX REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.02 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RIGAKU JUPITER 210 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 23925 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.400 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 87.4 REMARK 200 DATA REDUNDANCY : 4.900 REMARK 200 R MERGE (I) : 0.04900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 13.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.44 REMARK 200 COMPLETENESS FOR SHELL (%) : 65.1 REMARK 200 DATA REDUNDANCY IN SHELL : 2.70 REMARK 200 R MERGE FOR SHELL (I) : 0.35200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: PDB ENTRY 1IO4, 1GVJ REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 74.11 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.75 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 11% PEG MME 550, 0.1M KCL, 0.015M REMARK 280 MGCL2, 0.05M TRIS, PH 7.5, VAPOR DIFFUSION, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 47.88400 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 47.88400 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 51.13900 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 70.45100 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 51.13900 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 70.45100 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 47.88400 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 51.13900 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 70.45100 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 47.88400 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 51.13900 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 70.45100 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4810 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 16230 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -31.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ASP B 438 REMARK 465 ALA B 439 REMARK 465 ASP B 440 REMARK 465 GLU B 441 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 DT D 108 O4' - C1' - N1 ANGL. DEV. = 2.0 DEGREES REMARK 500 DG D 109 O4' - C1' - N9 ANGL. DEV. = 2.3 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 56 -72.68 -134.60 REMARK 500 PRO A 59 -77.77 -27.93 REMARK 500 ASP A 66 7.56 -67.95 REMARK 500 GLN A 127 -0.35 73.08 REMARK 500 ASP A 133 69.15 26.79 REMARK 500 ARG A 164 54.58 34.13 REMARK 500 ASN B 380 64.76 64.49 REMARK 500 LYS B 436 -74.76 -51.29 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 DG C 5 0.06 SIDE CHAIN REMARK 500 DC D 101 0.08 SIDE CHAIN REMARK 500 DG D 109 0.05 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3WTS RELATED DB: PDB REMARK 900 RELATED ID: 3WTT RELATED DB: PDB REMARK 900 RELATED ID: 3WTU RELATED DB: PDB REMARK 900 RELATED ID: 3WTV RELATED DB: PDB REMARK 900 RELATED ID: 3WTW RELATED DB: PDB REMARK 900 RELATED ID: 3WTX RELATED DB: PDB REMARK 900 RELATED ID: 3WTY RELATED DB: PDB REMARK 900 RELATED ID: 3WTZ RELATED DB: PDB REMARK 900 RELATED ID: 3WU0 RELATED DB: PDB DBREF 3WU1 A 55 177 UNP Q03347 RUNX1_MOUSE 55 177 DBREF 3WU1 B 333 441 UNP P14921 ETS1_HUMAN 333 441 DBREF 3WU1 C 1 16 PDB 3WU1 3WU1 1 16 DBREF 3WU1 D 101 116 PDB 3WU1 3WU1 101 116 SEQRES 1 A 123 LEU ALA ASP HIS PRO GLY GLU LEU VAL ARG THR ASP SER SEQRES 2 A 123 PRO ASN PHE LEU CYS SER VAL LEU PRO THR HIS TRP ARG SEQRES 3 A 123 CYS ASN LYS THR LEU PRO ILE ALA PHE LYS VAL VAL ALA SEQRES 4 A 123 LEU GLY ASP VAL PRO ASP GLY THR LEU VAL THR VAL MET SEQRES 5 A 123 ALA GLY ASN ASP GLU ASN TYR SER ALA GLU LEU ARG ASN SEQRES 6 A 123 ALA THR ALA ALA MET LYS ASN GLN VAL ALA ARG PHE ASN SEQRES 7 A 123 ASP LEU ARG PHE VAL GLY ARG SER GLY ARG GLY LYS SER SEQRES 8 A 123 PHE THR LEU THR ILE THR VAL PHE THR ASN PRO PRO GLN SEQRES 9 A 123 VAL ALA THR TYR HIS ARG ALA ILE LYS ILE THR VAL ASP SEQRES 10 A 123 GLY PRO ARG GLU PRO ARG SEQRES 1 B 109 GLY PRO ILE GLN LEU TRP GLN PHE LEU LEU GLU LEU LEU SEQRES 2 B 109 THR ASP LYS SER CYS GLN SER PHE ILE SER TRP THR GLY SEQRES 3 B 109 ASP GLY TRP GLU PHE LYS LEU SER ASP PRO ASP GLU VAL SEQRES 4 B 109 ALA ARG ARG TRP GLY LYS ARG LYS ASN LYS PRO LYS MET SEQRES 5 B 109 ASN TYR GLU LYS LEU SER ARG GLY LEU ARG TYR TYR TYR SEQRES 6 B 109 ASP LYS ASN ILE ILE HIS LYS THR ALA GLY LYS ARG TYR SEQRES 7 B 109 VAL TYR ARG PHE VAL CYS ASP LEU GLN SER LEU LEU GLY SEQRES 8 B 109 TYR THR PRO GLU GLU LEU HIS ALA MET LEU ASP VAL LYS SEQRES 9 B 109 PRO ASP ALA ASP GLU SEQRES 1 C 16 DG DG DA DA DG DC DC DA DC DA DT DC DC SEQRES 2 C 16 DT DC DT SEQRES 1 D 16 DC DA DG DA DG DG DA DT DG DT DG DG DC SEQRES 2 D 16 DT DT DC FORMUL 5 HOH *138(H2 O) HELIX 1 1 HIS A 58 LEU A 62 5 5 HELIX 2 2 GLN B 336 THR B 346 1 11 HELIX 3 3 ASP B 347 PHE B 353 5 7 HELIX 4 4 ASP B 367 ASN B 380 1 14 HELIX 5 5 ASN B 385 ASN B 400 1 16 HELIX 6 6 ASP B 417 GLY B 423 1 7 HELIX 7 7 THR B 425 LEU B 433 1 9 SHEET 1 A 9 VAL A 63 ARG A 64 0 SHEET 2 A 9 PHE A 70 CYS A 72 -1 O CYS A 72 N VAL A 63 SHEET 3 A 9 LYS A 90 ALA A 93 -1 O VAL A 92 N LEU A 71 SHEET 4 A 9 VAL A 128 ARG A 130 -1 O ALA A 129 N VAL A 91 SHEET 5 A 9 THR A 121 LYS A 125 -1 N LYS A 125 O VAL A 128 SHEET 6 A 9 LEU A 102 MET A 106 -1 N VAL A 103 O ALA A 122 SHEET 7 A 9 PHE A 146 VAL A 152 -1 O THR A 149 N MET A 106 SHEET 8 A 9 GLN A 158 THR A 169 -1 O GLN A 158 N VAL A 152 SHEET 9 A 9 HIS A 78 ARG A 80 1 N TRP A 79 O LYS A 167 SHEET 1 B 2 LEU A 117 ARG A 118 0 SHEET 2 B 2 ARG A 135 PHE A 136 -1 O ARG A 135 N ARG A 118 SHEET 1 C 4 SER B 355 TRP B 356 0 SHEET 2 C 4 GLU B 362 LYS B 364 -1 O LYS B 364 N SER B 355 SHEET 3 C 4 VAL B 411 PHE B 414 -1 O TYR B 412 N PHE B 363 SHEET 4 C 4 ILE B 402 LYS B 404 -1 N HIS B 403 O ARG B 413 CISPEP 1 ASN A 155 PRO A 156 0 -0.03 CRYST1 102.278 140.902 95.768 90.00 90.00 90.00 C 2 2 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009777 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007097 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010442 0.00000