HEADER TRANSFERASE 16-MAY-14 3WV9 TITLE GUANYLYLPYRIDINOL (GP)- AND ATP-BOUND HCGE FROM METHANOTHERMOBACTER TITLE 2 MARBURGENSIS COMPND MOL_ID: 1; COMPND 2 MOLECULE: HMD CO-OCCURRING PROTEIN HCGE; COMPND 3 CHAIN: A, B, C, D; COMPND 4 EC: 2.7.7.-; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: METHANOTHERMOBACTER MARBURGENSIS; SOURCE 3 ORGANISM_TAXID: 79929; SOURCE 4 STRAIN: DSM 2133 / 14651 / NBRC 100331 / OCM 82 / MARBURG; SOURCE 5 GENE: HCGE, MTBMA_C15310; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET24B KEYWDS E1 ENZYME SUPERFAMILY, UBA/THIF-TYPE NAD/FAD BINDING FOLD, KEYWDS 2 ADENYLYLTRANSFERASE, ATP BINDING, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR T.FUJISHIRO,U.ERMLER,S.SHIMA REVDAT 2 08-NOV-23 3WV9 1 REMARK SEQADV REVDAT 1 29-APR-15 3WV9 0 JRNL AUTH T.FUJISHIRO,J.KAHNT,U.ERMLER,S.SHIMA JRNL TITL PROTEIN-PYRIDINOL THIOESTER PRECURSOR FOR BIOSYNTHESIS OF JRNL TITL 2 THE ORGANOMETALLIC ACYL-IRON LIGAND IN [FE]-HYDROGENASE JRNL TITL 3 COFACTOR JRNL REF NAT COMMUN V. 6 6895 2015 JRNL REFN ESSN 2041-1723 JRNL PMID 25882909 JRNL DOI 10.1038/NCOMMS7895 REMARK 2 REMARK 2 RESOLUTION. 2.75 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0071 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.75 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.69 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 24213 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.168 REMARK 3 R VALUE (WORKING SET) : 0.165 REMARK 3 FREE R VALUE : 0.214 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.600 REMARK 3 FREE R VALUE TEST SET COUNT : 1173 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.75 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.82 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1781 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.1610 REMARK 3 BIN FREE R VALUE SET COUNT : 90 REMARK 3 BIN FREE R VALUE : 0.2190 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 6220 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 280 REMARK 3 SOLVENT ATOMS : 15 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 60.84 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.21000 REMARK 3 B22 (A**2) : 0.21000 REMARK 3 B33 (A**2) : -0.67000 REMARK 3 B12 (A**2) : 0.10000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.310 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.193 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 18.764 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.960 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.931 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 6600 ; 0.021 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 8984 ; 2.499 ; 2.027 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 816 ; 8.522 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 268 ;34.637 ;24.179 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1108 ;18.384 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 48 ;23.024 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1033 ; 0.150 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4821 ; 0.010 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 3276 ; 3.975 ; 4.185 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 4088 ; 6.192 ; 6.273 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 3324 ; 4.523 ; 4.423 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NCS TYPE: LOCAL REMARK 3 NUMBER OF DIFFERENT NCS PAIRS : 6 REMARK 3 GROUP CHAIN1 RANGE CHAIN2 RANGE COUNT RMS WEIGHT REMARK 3 1 A 7 211 B 7 211 490 0.14 0.05 REMARK 3 2 A 7 211 C 7 211 476 0.18 0.05 REMARK 3 3 A 7 211 D 7 211 440 0.19 0.05 REMARK 3 4 B 7 211 C 7 211 464 0.20 0.05 REMARK 3 5 B 7 211 D 7 211 436 0.19 0.05 REMARK 3 6 C 7 211 D 7 211 418 0.22 0.05 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 12 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 7 A 41 REMARK 3 ORIGIN FOR THE GROUP (A): 28.1464 15.7258 -39.1967 REMARK 3 T TENSOR REMARK 3 T11: 0.2226 T22: 0.2324 REMARK 3 T33: 0.1609 T12: -0.0070 REMARK 3 T13: -0.0469 T23: -0.0114 REMARK 3 L TENSOR REMARK 3 L11: 0.7053 L22: 0.4437 REMARK 3 L33: 0.3213 L12: -0.4969 REMARK 3 L13: -0.4747 L23: 0.3446 REMARK 3 S TENSOR REMARK 3 S11: -0.0701 S12: -0.0162 S13: -0.0091 REMARK 3 S21: -0.0814 S22: 0.0706 S23: 0.0513 REMARK 3 S31: 0.0316 S32: 0.0216 S33: -0.0005 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 42 A 72 REMARK 3 ORIGIN FOR THE GROUP (A): 40.5006 10.0604 -29.0208 REMARK 3 T TENSOR REMARK 3 T11: 0.2314 T22: 0.2200 REMARK 3 T33: 0.1335 T12: -0.0192 REMARK 3 T13: 0.0108 T23: 0.0070 REMARK 3 L TENSOR REMARK 3 L11: 2.4548 L22: 1.4904 REMARK 3 L33: 0.0459 L12: 0.5172 REMARK 3 L13: -0.1058 L23: 0.1913 REMARK 3 S TENSOR REMARK 3 S11: 0.0331 S12: -0.1315 S13: -0.1104 REMARK 3 S21: -0.0191 S22: -0.0576 S23: 0.0035 REMARK 3 S31: -0.0439 S32: 0.0044 S33: 0.0245 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 73 A 211 REMARK 3 ORIGIN FOR THE GROUP (A): 35.6959 4.5799 -45.6814 REMARK 3 T TENSOR REMARK 3 T11: 0.2083 T22: 0.2301 REMARK 3 T33: 0.1341 T12: -0.0225 REMARK 3 T13: 0.0049 T23: -0.0951 REMARK 3 L TENSOR REMARK 3 L11: 0.2187 L22: 0.6691 REMARK 3 L33: 0.1147 L12: -0.1157 REMARK 3 L13: 0.1273 L23: 0.0081 REMARK 3 S TENSOR REMARK 3 S11: 0.0415 S12: 0.0749 S13: -0.1225 REMARK 3 S21: -0.0531 S22: 0.0142 S23: 0.0983 REMARK 3 S31: -0.0490 S32: 0.0357 S33: -0.0558 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 7 B 82 REMARK 3 ORIGIN FOR THE GROUP (A): 47.4833 10.9666 26.9371 REMARK 3 T TENSOR REMARK 3 T11: 0.2082 T22: 0.2333 REMARK 3 T33: 0.1538 T12: 0.0085 REMARK 3 T13: 0.0309 T23: -0.0076 REMARK 3 L TENSOR REMARK 3 L11: 0.4952 L22: 0.4619 REMARK 3 L33: 0.1729 L12: -0.1551 REMARK 3 L13: 0.2511 L23: -0.2128 REMARK 3 S TENSOR REMARK 3 S11: -0.0038 S12: 0.0346 S13: -0.0616 REMARK 3 S21: 0.0619 S22: 0.0087 S23: -0.0401 REMARK 3 S31: -0.0218 S32: -0.0084 S33: -0.0049 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 83 B 144 REMARK 3 ORIGIN FOR THE GROUP (A): 58.6213 4.9118 18.5465 REMARK 3 T TENSOR REMARK 3 T11: 0.1922 T22: 0.2007 REMARK 3 T33: 0.2070 T12: 0.0149 REMARK 3 T13: 0.0618 T23: -0.0524 REMARK 3 L TENSOR REMARK 3 L11: 0.1736 L22: 1.5516 REMARK 3 L33: 0.2211 L12: -0.0727 REMARK 3 L13: 0.1627 L23: -0.0446 REMARK 3 S TENSOR REMARK 3 S11: -0.0106 S12: 0.0379 S13: -0.0904 REMARK 3 S21: -0.0579 S22: 0.0621 S23: -0.3131 REMARK 3 S31: -0.0127 S32: -0.0675 S33: -0.0515 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 145 B 211 REMARK 3 ORIGIN FOR THE GROUP (A): 55.8639 11.9267 8.3276 REMARK 3 T TENSOR REMARK 3 T11: 0.2795 T22: 0.2416 REMARK 3 T33: 0.0783 T12: -0.0219 REMARK 3 T13: 0.0852 T23: -0.0760 REMARK 3 L TENSOR REMARK 3 L11: 0.7505 L22: 0.1833 REMARK 3 L33: 0.1193 L12: -0.0370 REMARK 3 L13: 0.2764 L23: -0.0596 REMARK 3 S TENSOR REMARK 3 S11: 0.0283 S12: 0.1533 S13: -0.0460 REMARK 3 S21: -0.0629 S22: -0.0077 S23: 0.0056 REMARK 3 S31: -0.0071 S32: 0.0420 S33: -0.0206 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 7 C 163 REMARK 3 ORIGIN FOR THE GROUP (A): 19.3730 -1.2274 -17.0126 REMARK 3 T TENSOR REMARK 3 T11: 0.1936 T22: 0.2250 REMARK 3 T33: 0.1851 T12: -0.0101 REMARK 3 T13: -0.0518 T23: 0.0582 REMARK 3 L TENSOR REMARK 3 L11: 0.5409 L22: 0.0249 REMARK 3 L33: 0.1732 L12: -0.0146 REMARK 3 L13: -0.1846 L23: 0.0451 REMARK 3 S TENSOR REMARK 3 S11: -0.0596 S12: -0.0614 S13: -0.0488 REMARK 3 S21: -0.0022 S22: -0.0045 S23: -0.0165 REMARK 3 S31: 0.0003 S32: -0.0195 S33: 0.0641 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 164 C 179 REMARK 3 ORIGIN FOR THE GROUP (A): 25.2452 -5.4800 -2.1307 REMARK 3 T TENSOR REMARK 3 T11: 0.1465 T22: 0.2166 REMARK 3 T33: 0.2074 T12: -0.0208 REMARK 3 T13: -0.1336 T23: 0.1048 REMARK 3 L TENSOR REMARK 3 L11: 0.7026 L22: 0.0021 REMARK 3 L33: 3.3599 L12: 0.0268 REMARK 3 L13: -1.5304 L23: -0.0602 REMARK 3 S TENSOR REMARK 3 S11: 0.0583 S12: -0.1078 S13: -0.0056 REMARK 3 S21: -0.0092 S22: -0.0067 S23: 0.0111 REMARK 3 S31: -0.1056 S32: 0.1792 S33: -0.0517 REMARK 3 REMARK 3 TLS GROUP : 9 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 180 C 211 REMARK 3 ORIGIN FOR THE GROUP (A): 12.7950 -2.9400 -8.3845 REMARK 3 T TENSOR REMARK 3 T11: 0.3294 T22: 0.6578 REMARK 3 T33: 0.1151 T12: 0.0224 REMARK 3 T13: -0.0987 T23: 0.0324 REMARK 3 L TENSOR REMARK 3 L11: 0.9644 L22: 0.8741 REMARK 3 L33: 0.2538 L12: -0.8305 REMARK 3 L13: -0.4268 L23: 0.4687 REMARK 3 S TENSOR REMARK 3 S11: -0.3060 S12: -0.5482 S13: -0.1039 REMARK 3 S21: 0.2434 S22: 0.2414 S23: 0.1652 REMARK 3 S31: 0.1364 S32: 0.1046 S33: 0.0645 REMARK 3 REMARK 3 TLS GROUP : 10 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : D 7 D 12 REMARK 3 ORIGIN FOR THE GROUP (A): 28.6467 -0.8466 46.6343 REMARK 3 T TENSOR REMARK 3 T11: 0.2876 T22: 0.1862 REMARK 3 T33: 0.2140 T12: -0.0189 REMARK 3 T13: -0.0505 T23: -0.0048 REMARK 3 L TENSOR REMARK 3 L11: 1.6282 L22: 3.1934 REMARK 3 L33: 1.9564 L12: 2.2778 REMARK 3 L13: 1.7826 L23: 2.4884 REMARK 3 S TENSOR REMARK 3 S11: -0.1073 S12: 0.0671 S13: 0.0325 REMARK 3 S21: -0.1816 S22: 0.0947 S23: 0.0765 REMARK 3 S31: -0.0885 S32: 0.0776 S33: 0.0127 REMARK 3 REMARK 3 TLS GROUP : 11 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : D 13 D 114 REMARK 3 ORIGIN FOR THE GROUP (A): 51.7769 -9.2927 37.8112 REMARK 3 T TENSOR REMARK 3 T11: 0.2100 T22: 0.2053 REMARK 3 T33: 0.1856 T12: -0.0167 REMARK 3 T13: -0.0613 T23: -0.0431 REMARK 3 L TENSOR REMARK 3 L11: 0.7078 L22: 1.1259 REMARK 3 L33: 0.1815 L12: 0.6050 REMARK 3 L13: -0.3407 L23: -0.3576 REMARK 3 S TENSOR REMARK 3 S11: 0.0198 S12: -0.0416 S13: 0.0157 REMARK 3 S21: 0.0892 S22: -0.0659 S23: -0.1033 REMARK 3 S31: -0.0094 S32: -0.0023 S33: 0.0462 REMARK 3 REMARK 3 TLS GROUP : 12 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : D 115 D 211 REMARK 3 ORIGIN FOR THE GROUP (A): 57.1172 -10.3892 54.1926 REMARK 3 T TENSOR REMARK 3 T11: 0.2541 T22: 0.4478 REMARK 3 T33: 0.0713 T12: -0.0267 REMARK 3 T13: -0.1073 T23: -0.0913 REMARK 3 L TENSOR REMARK 3 L11: 0.4368 L22: 0.1566 REMARK 3 L33: 1.1117 L12: -0.0731 REMARK 3 L13: 0.3137 L23: -0.4102 REMARK 3 S TENSOR REMARK 3 S11: 0.0281 S12: -0.3970 S13: 0.0895 REMARK 3 S21: -0.0160 S22: -0.0535 S23: -0.0011 REMARK 3 S31: 0.0434 S32: -0.0075 S33: 0.0254 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: U VALUES : WITH TLS ADDED REMARK 4 REMARK 4 3WV9 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 22-MAY-14. REMARK 100 THE DEPOSITION ID IS D_1000096835. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 30-NOV-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X10SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.008 REMARK 200 MONOCHROMATOR : A SI(111) DOUBLE CRYSTAL REMARK 200 MONOCHROMATOR REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : PSI PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE, XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 25386 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.750 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 7.790 REMARK 200 R MERGE (I) : 0.10500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 15.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.75 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.85 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.87000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.470 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 1ZUD REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.64 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.65 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 35%(W/V)PENTAERYTHRITOL ETHOXYLATE REMARK 280 270, 200MM AMMONIUM SULFATE, 100MM SODIUM ACETATE, PH 4.6, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE ROOM TEMPERATUREK REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 3 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4, 5, 6, 7, 8 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 5 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6630 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 24700 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -29.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 85.00000 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 42.50000 REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 73.61216 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 6 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6450 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 24700 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -34.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 85.00000 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 42.50000 REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 73.61216 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 7 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6180 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 26010 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -36.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 8 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 7010 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 25180 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -37.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 42.50000 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 -73.61216 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 85.00000 REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 GLU A 2 REMARK 465 ILE A 3 REMARK 465 SER A 4 REMARK 465 GLU A 5 REMARK 465 LEU A 6 REMARK 465 ARG A 212 REMARK 465 LEU A 213 REMARK 465 GLU A 214 REMARK 465 LEU A 215 REMARK 465 VAL A 216 REMARK 465 PRO A 217 REMARK 465 ARG A 218 REMARK 465 MET B 1 REMARK 465 GLU B 2 REMARK 465 ILE B 3 REMARK 465 SER B 4 REMARK 465 GLU B 5 REMARK 465 LEU B 6 REMARK 465 ARG B 212 REMARK 465 LEU B 213 REMARK 465 GLU B 214 REMARK 465 LEU B 215 REMARK 465 VAL B 216 REMARK 465 PRO B 217 REMARK 465 ARG B 218 REMARK 465 MET C 1 REMARK 465 GLU C 2 REMARK 465 ILE C 3 REMARK 465 SER C 4 REMARK 465 GLU C 5 REMARK 465 LEU C 6 REMARK 465 ARG C 212 REMARK 465 LEU C 213 REMARK 465 GLU C 214 REMARK 465 LEU C 215 REMARK 465 VAL C 216 REMARK 465 PRO C 217 REMARK 465 ARG C 218 REMARK 465 MET D 1 REMARK 465 GLU D 2 REMARK 465 ILE D 3 REMARK 465 SER D 4 REMARK 465 GLU D 5 REMARK 465 LEU D 6 REMARK 465 ARG D 212 REMARK 465 LEU D 213 REMARK 465 GLU D 214 REMARK 465 LEU D 215 REMARK 465 VAL D 216 REMARK 465 PRO D 217 REMARK 465 ARG D 218 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU A 7 CG GLU A 7 CD 0.091 REMARK 500 GLU A 143 CD GLU A 143 OE2 0.097 REMARK 500 GLU C 153 CB GLU C 153 CG 0.142 REMARK 500 GLU C 153 CG GLU C 153 CD 0.178 REMARK 500 GLU C 153 CD GLU C 153 OE1 -0.074 REMARK 500 ARG D 208 NE ARG D 208 CZ 0.113 REMARK 500 ARG D 208 CZ ARG D 208 NH2 0.130 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LEU A 60 CB - CG - CD2 ANGL. DEV. = 10.2 DEGREES REMARK 500 ASP A 145 CB - CG - OD1 ANGL. DEV. = -7.8 DEGREES REMARK 500 ASP A 145 CB - CG - OD2 ANGL. DEV. = 6.2 DEGREES REMARK 500 GLY B 8 N - CA - C ANGL. DEV. = -17.8 DEGREES REMARK 500 ASP B 54 CB - CG - OD1 ANGL. DEV. = 7.3 DEGREES REMARK 500 LYS B 71 CD - CE - NZ ANGL. DEV. = -17.4 DEGREES REMARK 500 ASP C 54 CB - CG - OD2 ANGL. DEV. = -5.6 DEGREES REMARK 500 ARG C 83 NE - CZ - NH1 ANGL. DEV. = -3.3 DEGREES REMARK 500 GLY C 142 N - CA - C ANGL. DEV. = 18.1 DEGREES REMARK 500 GLU C 153 OE1 - CD - OE2 ANGL. DEV. = -8.4 DEGREES REMARK 500 LEU C 180 N - CA - C ANGL. DEV. = 20.7 DEGREES REMARK 500 ILE C 181 CG1 - CB - CG2 ANGL. DEV. = -15.9 DEGREES REMARK 500 ARG D 123 NE - CZ - NH2 ANGL. DEV. = 3.2 DEGREES REMARK 500 GLY D 137 N - CA - C ANGL. DEV. = -18.9 DEGREES REMARK 500 LEU D 180 CB - CG - CD2 ANGL. DEV. = -11.3 DEGREES REMARK 500 PRO D 186 C - N - CD ANGL. DEV. = -16.5 DEGREES REMARK 500 ARG D 208 NE - CZ - NH1 ANGL. DEV. = -4.7 DEGREES REMARK 500 ARG D 208 NE - CZ - NH2 ANGL. DEV. = 7.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 CYS A 78 171.70 -59.29 REMARK 500 GLU A 144 152.01 -47.39 REMARK 500 ALA A 210 -2.96 -56.66 REMARK 500 ALA B 21 40.54 -142.41 REMARK 500 ASP B 47 131.68 -170.68 REMARK 500 ASP B 79 -78.61 -42.92 REMARK 500 GLU B 144 177.71 -55.98 REMARK 500 VAL B 146 44.44 -28.69 REMARK 500 ASP B 155 108.57 -54.33 REMARK 500 ALA C 21 47.64 -144.18 REMARK 500 ARG C 23 -38.94 -39.14 REMARK 500 ILE C 65 127.22 -39.70 REMARK 500 ASP C 79 -4.68 -37.38 REMARK 500 GLU C 144 142.35 -39.96 REMARK 500 VAL C 149 -158.28 -154.86 REMARK 500 ASP C 150 79.20 -156.79 REMARK 500 ILE C 151 -106.49 37.83 REMARK 500 THR C 177 -76.81 -87.98 REMARK 500 ALA C 210 15.96 -66.04 REMARK 500 ASP D 47 142.54 -173.41 REMARK 500 ASP D 113 48.12 -1.65 REMARK 500 MET D 136 40.12 116.20 REMARK 500 GLU D 144 152.15 -36.28 REMARK 500 GLU D 153 25.79 -157.68 REMARK 500 ALA D 154 -28.19 -156.08 REMARK 500 ASP D 155 84.03 -62.69 REMARK 500 GLU D 157 72.90 -173.60 REMARK 500 ASN D 158 -168.21 35.35 REMARK 500 LEU D 180 -164.55 -127.40 REMARK 500 ASP D 183 -70.87 -76.65 REMARK 500 PRO D 186 -135.57 -137.92 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 ASP C 152 GLU C 153 133.27 REMARK 500 LYS C 179 LEU C 180 -145.60 REMARK 500 THR D 135 MET D 136 127.22 REMARK 500 MET D 136 GLY D 137 142.71 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ATP A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FEG A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 305 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ATP B 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FEG B 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 C 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ATP C 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FEG C 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 C 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 C 305 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 C 306 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ATP D 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 D 302 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3WV7 RELATED DB: PDB REMARK 900 RELATED ID: 3WV8 RELATED DB: PDB REMARK 900 RELATED ID: 3WVA RELATED DB: PDB REMARK 900 RELATED ID: 3WVB RELATED DB: PDB REMARK 900 RELATED ID: 3WVC RELATED DB: PDB DBREF 3WV9 A 1 212 UNP D9PY12 D9PY12_METTM 1 212 DBREF 3WV9 B 1 212 UNP D9PY12 D9PY12_METTM 1 212 DBREF 3WV9 C 1 212 UNP D9PY12 D9PY12_METTM 1 212 DBREF 3WV9 D 1 212 UNP D9PY12 D9PY12_METTM 1 212 SEQADV 3WV9 LEU A 213 UNP D9PY12 EXPRESSION TAG SEQADV 3WV9 GLU A 214 UNP D9PY12 EXPRESSION TAG SEQADV 3WV9 LEU A 215 UNP D9PY12 EXPRESSION TAG SEQADV 3WV9 VAL A 216 UNP D9PY12 EXPRESSION TAG SEQADV 3WV9 PRO A 217 UNP D9PY12 EXPRESSION TAG SEQADV 3WV9 ARG A 218 UNP D9PY12 EXPRESSION TAG SEQADV 3WV9 LEU B 213 UNP D9PY12 EXPRESSION TAG SEQADV 3WV9 GLU B 214 UNP D9PY12 EXPRESSION TAG SEQADV 3WV9 LEU B 215 UNP D9PY12 EXPRESSION TAG SEQADV 3WV9 VAL B 216 UNP D9PY12 EXPRESSION TAG SEQADV 3WV9 PRO B 217 UNP D9PY12 EXPRESSION TAG SEQADV 3WV9 ARG B 218 UNP D9PY12 EXPRESSION TAG SEQADV 3WV9 LEU C 213 UNP D9PY12 EXPRESSION TAG SEQADV 3WV9 GLU C 214 UNP D9PY12 EXPRESSION TAG SEQADV 3WV9 LEU C 215 UNP D9PY12 EXPRESSION TAG SEQADV 3WV9 VAL C 216 UNP D9PY12 EXPRESSION TAG SEQADV 3WV9 PRO C 217 UNP D9PY12 EXPRESSION TAG SEQADV 3WV9 ARG C 218 UNP D9PY12 EXPRESSION TAG SEQADV 3WV9 LEU D 213 UNP D9PY12 EXPRESSION TAG SEQADV 3WV9 GLU D 214 UNP D9PY12 EXPRESSION TAG SEQADV 3WV9 LEU D 215 UNP D9PY12 EXPRESSION TAG SEQADV 3WV9 VAL D 216 UNP D9PY12 EXPRESSION TAG SEQADV 3WV9 PRO D 217 UNP D9PY12 EXPRESSION TAG SEQADV 3WV9 ARG D 218 UNP D9PY12 EXPRESSION TAG SEQRES 1 A 218 MET GLU ILE SER GLU LEU GLU GLY LYS LYS VAL PRO HIS SEQRES 2 A 218 GLY GLU VAL THR LEU VAL GLY ALA GLY ARG LEU GLY PHE SEQRES 3 A 218 ARG THR ALA LEU ASN LEU MET GLN ILE HIS ARG GLY GLY SEQRES 4 A 218 PRO GLU ARG ILE LYS VAL ILE ASP GLY GLN LYS VAL SER SEQRES 5 A 218 ALA ASP ASP LEU ILE PHE ARG LEU MET GLY ALA LYS ILE SEQRES 6 A 218 GLY GLU TYR LYS VAL LYS PHE ILE GLU SER LEU ALA CYS SEQRES 7 A 218 ASP GLY PHE SER ARG THR VAL GLN GLY ILE PRO GLU TYR SEQRES 8 A 218 ILE THR GLY ASP ASN LEU ARG LEU ILE GLY GLY ASP VAL SEQRES 9 A 218 VAL CYS VAL GLU ILE ALA GLY GLY ASP THR LEU PRO ILE SEQRES 10 A 218 THR THR GLU ILE ILE ARG TYR ALA GLN GLU ARG GLY ALA SEQRES 11 A 218 ALA THR ILE SER THR MET GLY VAL PHE GLY ILE GLY GLU SEQRES 12 A 218 GLU ASP VAL SER VAL VAL ASP ILE ASP GLU ALA ASP PRO SEQRES 13 A 218 GLU ASN PRO ILE ALA ALA TYR LEU GLN ALA GLU GLY ILE SEQRES 14 A 218 HIS GLU HIS VAL LEU VAL GLY THR GLY LYS LEU ILE ARG SEQRES 15 A 218 ASP TRP GLU PRO VAL THR PRO HIS VAL LEU ASP ARG VAL SEQRES 16 A 218 SER GLU VAL MET THR ALA GLU ILE LEU LYS LEU LEU ARG SEQRES 17 A 218 GLY ALA GLN ARG LEU GLU LEU VAL PRO ARG SEQRES 1 B 218 MET GLU ILE SER GLU LEU GLU GLY LYS LYS VAL PRO HIS SEQRES 2 B 218 GLY GLU VAL THR LEU VAL GLY ALA GLY ARG LEU GLY PHE SEQRES 3 B 218 ARG THR ALA LEU ASN LEU MET GLN ILE HIS ARG GLY GLY SEQRES 4 B 218 PRO GLU ARG ILE LYS VAL ILE ASP GLY GLN LYS VAL SER SEQRES 5 B 218 ALA ASP ASP LEU ILE PHE ARG LEU MET GLY ALA LYS ILE SEQRES 6 B 218 GLY GLU TYR LYS VAL LYS PHE ILE GLU SER LEU ALA CYS SEQRES 7 B 218 ASP GLY PHE SER ARG THR VAL GLN GLY ILE PRO GLU TYR SEQRES 8 B 218 ILE THR GLY ASP ASN LEU ARG LEU ILE GLY GLY ASP VAL SEQRES 9 B 218 VAL CYS VAL GLU ILE ALA GLY GLY ASP THR LEU PRO ILE SEQRES 10 B 218 THR THR GLU ILE ILE ARG TYR ALA GLN GLU ARG GLY ALA SEQRES 11 B 218 ALA THR ILE SER THR MET GLY VAL PHE GLY ILE GLY GLU SEQRES 12 B 218 GLU ASP VAL SER VAL VAL ASP ILE ASP GLU ALA ASP PRO SEQRES 13 B 218 GLU ASN PRO ILE ALA ALA TYR LEU GLN ALA GLU GLY ILE SEQRES 14 B 218 HIS GLU HIS VAL LEU VAL GLY THR GLY LYS LEU ILE ARG SEQRES 15 B 218 ASP TRP GLU PRO VAL THR PRO HIS VAL LEU ASP ARG VAL SEQRES 16 B 218 SER GLU VAL MET THR ALA GLU ILE LEU LYS LEU LEU ARG SEQRES 17 B 218 GLY ALA GLN ARG LEU GLU LEU VAL PRO ARG SEQRES 1 C 218 MET GLU ILE SER GLU LEU GLU GLY LYS LYS VAL PRO HIS SEQRES 2 C 218 GLY GLU VAL THR LEU VAL GLY ALA GLY ARG LEU GLY PHE SEQRES 3 C 218 ARG THR ALA LEU ASN LEU MET GLN ILE HIS ARG GLY GLY SEQRES 4 C 218 PRO GLU ARG ILE LYS VAL ILE ASP GLY GLN LYS VAL SER SEQRES 5 C 218 ALA ASP ASP LEU ILE PHE ARG LEU MET GLY ALA LYS ILE SEQRES 6 C 218 GLY GLU TYR LYS VAL LYS PHE ILE GLU SER LEU ALA CYS SEQRES 7 C 218 ASP GLY PHE SER ARG THR VAL GLN GLY ILE PRO GLU TYR SEQRES 8 C 218 ILE THR GLY ASP ASN LEU ARG LEU ILE GLY GLY ASP VAL SEQRES 9 C 218 VAL CYS VAL GLU ILE ALA GLY GLY ASP THR LEU PRO ILE SEQRES 10 C 218 THR THR GLU ILE ILE ARG TYR ALA GLN GLU ARG GLY ALA SEQRES 11 C 218 ALA THR ILE SER THR MET GLY VAL PHE GLY ILE GLY GLU SEQRES 12 C 218 GLU ASP VAL SER VAL VAL ASP ILE ASP GLU ALA ASP PRO SEQRES 13 C 218 GLU ASN PRO ILE ALA ALA TYR LEU GLN ALA GLU GLY ILE SEQRES 14 C 218 HIS GLU HIS VAL LEU VAL GLY THR GLY LYS LEU ILE ARG SEQRES 15 C 218 ASP TRP GLU PRO VAL THR PRO HIS VAL LEU ASP ARG VAL SEQRES 16 C 218 SER GLU VAL MET THR ALA GLU ILE LEU LYS LEU LEU ARG SEQRES 17 C 218 GLY ALA GLN ARG LEU GLU LEU VAL PRO ARG SEQRES 1 D 218 MET GLU ILE SER GLU LEU GLU GLY LYS LYS VAL PRO HIS SEQRES 2 D 218 GLY GLU VAL THR LEU VAL GLY ALA GLY ARG LEU GLY PHE SEQRES 3 D 218 ARG THR ALA LEU ASN LEU MET GLN ILE HIS ARG GLY GLY SEQRES 4 D 218 PRO GLU ARG ILE LYS VAL ILE ASP GLY GLN LYS VAL SER SEQRES 5 D 218 ALA ASP ASP LEU ILE PHE ARG LEU MET GLY ALA LYS ILE SEQRES 6 D 218 GLY GLU TYR LYS VAL LYS PHE ILE GLU SER LEU ALA CYS SEQRES 7 D 218 ASP GLY PHE SER ARG THR VAL GLN GLY ILE PRO GLU TYR SEQRES 8 D 218 ILE THR GLY ASP ASN LEU ARG LEU ILE GLY GLY ASP VAL SEQRES 9 D 218 VAL CYS VAL GLU ILE ALA GLY GLY ASP THR LEU PRO ILE SEQRES 10 D 218 THR THR GLU ILE ILE ARG TYR ALA GLN GLU ARG GLY ALA SEQRES 11 D 218 ALA THR ILE SER THR MET GLY VAL PHE GLY ILE GLY GLU SEQRES 12 D 218 GLU ASP VAL SER VAL VAL ASP ILE ASP GLU ALA ASP PRO SEQRES 13 D 218 GLU ASN PRO ILE ALA ALA TYR LEU GLN ALA GLU GLY ILE SEQRES 14 D 218 HIS GLU HIS VAL LEU VAL GLY THR GLY LYS LEU ILE ARG SEQRES 15 D 218 ASP TRP GLU PRO VAL THR PRO HIS VAL LEU ASP ARG VAL SEQRES 16 D 218 SER GLU VAL MET THR ALA GLU ILE LEU LYS LEU LEU ARG SEQRES 17 D 218 GLY ALA GLN ARG LEU GLU LEU VAL PRO ARG HET ATP A 301 31 HET FEG A 302 37 HET SO4 A 303 5 HET SO4 A 304 5 HET SO4 A 305 5 HET ATP B 301 31 HET FEG B 302 37 HET SO4 B 303 5 HET ATP C 302 31 HET FEG C 303 37 HET SO4 C 304 5 HET SO4 C 301 5 HET SO4 C 305 5 HET SO4 C 306 5 HET ATP D 301 31 HET SO4 D 302 5 HETNAM ATP ADENOSINE-5'-TRIPHOSPHATE HETNAM FEG 5'-O-[(S)-{[2-(CARBOXYMETHYL)-6-HYDROXY-3,5- HETNAM 2 FEG DIMETHYLPYRIDIN-4-YL]OXY}(HYDROXY)PHOSPHORYL]GUANOSINE HETNAM SO4 SULFATE ION FORMUL 5 ATP 4(C10 H16 N5 O13 P3) FORMUL 6 FEG 3(C19 H23 N6 O11 P) FORMUL 7 SO4 9(O4 S 2-) FORMUL 21 HOH *15(H2 O) HELIX 1 1 GLY A 22 ILE A 35 1 14 HELIX 2 2 ASP A 55 MET A 61 1 7 HELIX 3 3 TYR A 68 LEU A 76 1 9 HELIX 4 4 ASN A 96 ILE A 100 5 5 HELIX 5 5 THR A 114 ARG A 128 1 15 HELIX 6 6 ASP A 152 ALA A 154 5 3 HELIX 7 7 ASN A 158 GLU A 167 1 10 HELIX 8 8 THR A 188 ALA A 210 1 23 HELIX 9 9 GLY B 22 GLN B 34 1 13 HELIX 10 10 ASP B 55 GLY B 62 1 8 HELIX 11 11 TYR B 68 LEU B 76 1 9 HELIX 12 12 ASN B 96 ILE B 100 5 5 HELIX 13 13 THR B 114 ARG B 128 1 15 HELIX 14 14 ASP B 152 ALA B 154 5 3 HELIX 15 15 ASN B 158 GLU B 167 1 10 HELIX 16 16 THR B 188 ALA B 210 1 23 HELIX 17 17 GLY C 22 ILE C 35 1 14 HELIX 18 18 ASP C 55 MET C 61 1 7 HELIX 19 19 TYR C 68 LEU C 76 1 9 HELIX 20 20 ASN C 96 ILE C 100 5 5 HELIX 21 21 THR C 114 ARG C 128 1 15 HELIX 22 22 ASN C 158 GLU C 167 1 10 HELIX 23 23 THR C 188 ALA C 210 1 23 HELIX 24 24 GLY D 22 GLN D 34 1 13 HELIX 25 25 ASP D 55 GLY D 62 1 8 HELIX 26 26 TYR D 68 LEU D 76 1 9 HELIX 27 27 ASN D 96 ILE D 100 5 5 HELIX 28 28 LEU D 115 ARG D 128 1 14 HELIX 29 29 ILE D 160 GLN D 165 1 6 HELIX 30 30 ALA D 166 GLY D 168 5 3 HELIX 31 31 THR D 188 ALA D 210 1 23 SHEET 1 A 7 THR A 84 ILE A 88 0 SHEET 2 A 7 ARG A 42 ILE A 46 1 N VAL A 45 O ILE A 88 SHEET 3 A 7 GLU A 15 VAL A 19 1 N LEU A 18 O LYS A 44 SHEET 4 A 7 VAL A 104 VAL A 107 1 O CYS A 106 N THR A 17 SHEET 5 A 7 ALA A 131 THR A 135 1 O ILE A 133 N VAL A 107 SHEET 6 A 7 HIS A 172 GLY A 176 1 O VAL A 173 N THR A 132 SHEET 7 A 7 SER A 147 ASP A 150 -1 N VAL A 149 O LEU A 174 SHEET 1 B 7 THR B 84 ILE B 88 0 SHEET 2 B 7 ARG B 42 ILE B 46 1 N ILE B 43 O THR B 84 SHEET 3 B 7 GLU B 15 VAL B 19 1 N LEU B 18 O LYS B 44 SHEET 4 B 7 VAL B 104 VAL B 107 1 O CYS B 106 N THR B 17 SHEET 5 B 7 ALA B 131 THR B 135 1 O ILE B 133 N VAL B 107 SHEET 6 B 7 HIS B 172 GLY B 176 1 O VAL B 175 N SER B 134 SHEET 7 B 7 SER B 147 ASP B 150 -1 N VAL B 149 O LEU B 174 SHEET 1 C 7 THR C 84 ILE C 88 0 SHEET 2 C 7 ARG C 42 ILE C 46 1 N VAL C 45 O GLN C 86 SHEET 3 C 7 GLU C 15 VAL C 19 1 N LEU C 18 O LYS C 44 SHEET 4 C 7 VAL C 104 VAL C 107 1 O CYS C 106 N VAL C 19 SHEET 5 C 7 ALA C 131 THR C 135 1 O ILE C 133 N VAL C 107 SHEET 6 C 7 VAL C 173 GLY C 176 1 O VAL C 173 N THR C 132 SHEET 7 C 7 SER C 147 VAL C 148 -1 N SER C 147 O GLY C 176 SHEET 1 D 7 THR D 84 ILE D 88 0 SHEET 2 D 7 ARG D 42 ILE D 46 1 N ILE D 43 O THR D 84 SHEET 3 D 7 GLU D 15 VAL D 19 1 N LEU D 18 O LYS D 44 SHEET 4 D 7 VAL D 104 VAL D 107 1 O VAL D 104 N THR D 17 SHEET 5 D 7 ALA D 131 SER D 134 1 O ILE D 133 N VAL D 107 SHEET 6 D 7 HIS D 172 GLY D 176 1 O VAL D 175 N SER D 134 SHEET 7 D 7 SER D 147 ILE D 151 -1 N SER D 147 O GLY D 176 CISPEP 1 THR C 177 GLY C 178 0 -4.83 CISPEP 2 ALA D 110 GLY D 111 0 -8.67 CISPEP 3 GLU D 153 ALA D 154 0 4.48 CISPEP 4 ASN D 158 PRO D 159 0 -6.68 CISPEP 5 GLU D 185 PRO D 186 0 -0.01 SITE 1 AC1 11 GLY A 20 GLY A 22 ARG A 23 ASP A 47 SITE 2 AC1 11 GLN A 49 LYS A 69 ILE A 92 ILE A 109 SITE 3 AC1 11 ALA A 110 GLY A 111 FEG A 302 SITE 1 AC2 17 GLU A 7 ARG A 23 LEU A 24 ILE A 109 SITE 2 AC2 17 ALA A 110 ASP A 113 THR A 114 LEU A 115 SITE 3 AC2 17 THR A 135 GLY A 137 VAL A 138 PHE A 139 SITE 4 AC2 17 ILE A 160 LEU A 180 ILE A 181 ARG A 182 SITE 5 AC2 17 ATP A 301 SITE 1 AC3 3 ARG A 98 TYR A 124 TYR C 68 SITE 1 AC4 4 GLU A 15 GLY A 101 GLY A 102 LYS C 71 SITE 1 AC5 4 HIS A 13 GLY A 39 LEU A 207 ARG A 208 SITE 1 AC6 14 GLY B 22 ARG B 23 HIS B 36 ARG B 37 SITE 2 AC6 14 ILE B 46 ASP B 47 GLN B 49 ASP B 55 SITE 3 AC6 14 LYS B 69 TYR B 91 ILE B 92 ILE B 109 SITE 4 AC6 14 ALA B 110 FEG B 302 SITE 1 AC7 15 ARG B 23 LEU B 24 ALA B 110 ASP B 113 SITE 2 AC7 15 THR B 114 THR B 135 MET B 136 GLY B 137 SITE 3 AC7 15 VAL B 138 PRO B 159 ILE B 160 LEU B 180 SITE 4 AC7 15 ILE B 181 ARG B 182 ATP B 301 SITE 1 AC8 4 LYS B 50 TYR B 68 ARG D 98 TYR D 124 SITE 1 AC9 3 TYR A 68 TYR C 124 ARG C 128 SITE 1 BC1 13 VAL C 19 GLY C 20 GLY C 22 ARG C 23 SITE 2 BC1 13 HIS C 36 ILE C 46 ASP C 47 GLN C 49 SITE 3 BC1 13 LYS C 69 ILE C 109 ALA C 110 FEG C 303 SITE 4 BC1 13 HOH C 403 SITE 1 BC2 14 HIS C 36 ARG C 37 ILE C 109 ALA C 110 SITE 2 BC2 14 THR C 114 THR C 135 VAL C 138 PHE C 139 SITE 3 BC2 14 PRO C 159 ILE C 160 LYS C 179 ILE C 181 SITE 4 BC2 14 ARG C 182 ATP C 302 SITE 1 BC3 3 SER A 82 PHE C 81 SER C 82 SITE 1 BC4 1 GLU C 120 SITE 1 BC5 1 ARG C 59 SITE 1 BC6 14 VAL D 19 GLY D 22 ARG D 23 HIS D 36 SITE 2 BC6 14 ILE D 46 ASP D 47 GLN D 49 ASP D 54 SITE 3 BC6 14 ASP D 55 LYS D 69 TYR D 91 ILE D 92 SITE 4 BC6 14 ILE D 109 ALA D 110 SITE 1 BC7 3 TYR B 124 LYS D 50 TYR D 68 CRYST1 85.000 85.000 120.780 90.00 90.00 120.00 P 3 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011765 0.006792 0.000000 0.00000 SCALE2 0.000000 0.013585 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008280 0.00000