HEADER ISOMERASE 13-JUN-14 3WW1 TITLE X-RAY STRUCTURE OF CELLULOMONAS PARAHOMINIS L-RIBOSE ISOMERASE WITH L- TITLE 2 RIBOSE COMPND MOL_ID: 1; COMPND 2 MOLECULE: L-RIBOSE ISOMERASE; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES; COMPND 5 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CELLULOMONAS PARAHOMINIS; SOURCE 3 ORGANISM_TAXID: 285079; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: JM109; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PQE30 KEYWDS CUPIN-TYPE BETA-BARREL, ISOMERASE EXPDTA X-RAY DIFFRACTION AUTHOR Y.TERAMI,H.YOSHIDA,G.TAKATA,S.KAMITORI REVDAT 4 24-AUG-22 3WW1 1 JRNL HETSYN REVDAT 3 29-JUL-20 3WW1 1 COMPND REMARK HETNAM LINK REVDAT 3 2 1 SITE REVDAT 2 01-JUL-20 3WW1 1 SEQADV LINK ATOM REVDAT 1 29-APR-15 3WW1 0 JRNL AUTH Y.TERAMI,H.YOSHIDA,K.UECHI,K.MORIMOTO,G.TAKATA,S.KAMITORI JRNL TITL ESSENTIALITY OF TETRAMER FORMATION OF CELLULOMONAS JRNL TITL 2 PARAHOMINIS L-RIBOSE ISOMERASE INVOLVED IN NOVEL L-RIBOSE JRNL TITL 3 METABOLIC PATHWAY. JRNL REF APPL.MICROBIOL.BIOTECHNOL. V. 99 6303 2015 JRNL REFN ESSN 1432-0614 JRNL PMID 25661811 JRNL DOI 10.1007/S00253-015-6417-4 REMARK 2 REMARK 2 RESOLUTION. 1.95 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.3 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.95 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.33 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 5344503.180 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 98.5 REMARK 3 NUMBER OF REFLECTIONS : 37539 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.202 REMARK 3 FREE R VALUE : 0.242 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.000 REMARK 3 FREE R VALUE TEST SET COUNT : 3758 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.004 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 10 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.95 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.02 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 96.70 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 3278 REMARK 3 BIN R VALUE (WORKING SET) : 0.3260 REMARK 3 BIN FREE R VALUE : 0.3610 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 10.60 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 387 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.018 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3764 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 42 REMARK 3 SOLVENT ATOMS : 210 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 19.00 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 35.20 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -3.40000 REMARK 3 B22 (A**2) : 1.31000 REMARK 3 B33 (A**2) : 2.09000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.24 REMARK 3 ESD FROM SIGMAA (A) : 0.31 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.29 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.35 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.006 REMARK 3 BOND ANGLES (DEGREES) : 1.400 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 25.30 REMARK 3 IMPROPER ANGLES (DEGREES) : 0.940 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 1.380 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 2.210 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 1.950 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 2.780 ; 2.500 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.45 REMARK 3 BSOL : 59.72 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : DNA-RNA_REP.PARAM REMARK 3 PARAMETER FILE 3 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 4 : ION.PARAM REMARK 3 PARAMETER FILE 5 : CARBOHYDRATE.PARAM REMARK 3 PARAMETER FILE 6 : LIGAND.PARAM REMARK 3 PARAMETER FILE 7 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : DNA-RNA.TOP REMARK 3 TOPOLOGY FILE 3 : WATER.TOP REMARK 3 TOPOLOGY FILE 4 : ION.TOP REMARK 3 TOPOLOGY FILE 5 : CARBOHYDRATE.TOP REMARK 3 TOPOLOGY FILE 6 : LIGAND.TOP REMARK 3 TOPOLOGY FILE 7 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: BULK SOLVENT MODEL USED REMARK 4 REMARK 4 3WW1 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 03-JUL-14. REMARK 100 THE DEPOSITION ID IS D_1000096863. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 08-NOV-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU MICROMAX-007 HF REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : CONFOCAL ELIPTICAL MIRROR REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS VII REMARK 200 INTENSITY-INTEGRATION SOFTWARE : CRYSTALCLEAR REMARK 200 DATA SCALING SOFTWARE : CRYSTALCLEAR REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 37576 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.950 REMARK 200 RESOLUTION RANGE LOW (A) : 19.330 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.7 REMARK 200 DATA REDUNDANCY : 5.500 REMARK 200 R MERGE (I) : 0.07600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.95 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.02 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.7 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.40800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 4.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.28 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 3.9M AMMONIUM ACETATE, 0.1M SODIUM REMARK 280 ACETATE TRIHYDRATE, PH 4.6, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 76.01000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 76.01000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 38.36500 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 44.27500 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 38.36500 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 44.27500 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 76.01000 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 38.36500 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 44.27500 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 76.01000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 38.36500 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 44.27500 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 13040 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 34360 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -67.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 HIS A -6 REMARK 465 HIS A -5 REMARK 465 HIS A -4 REMARK 465 HIS A -3 REMARK 465 HIS A -2 REMARK 465 HIS A -1 REMARK 465 GLY A 0 REMARK 465 SER A 1 REMARK 465 HIS A 215 REMARK 465 ALA A 216 REMARK 465 HIS A 217 REMARK 465 ASP A 218 REMARK 465 LYS A 219 REMARK 465 ALA A 220 REMARK 465 HIS B -6 REMARK 465 HIS B -5 REMARK 465 HIS B -4 REMARK 465 HIS B -3 REMARK 465 HIS B -2 REMARK 465 HIS B -1 REMARK 465 GLY B 0 REMARK 465 SER B 1 REMARK 465 HIS B 215 REMARK 465 ALA B 216 REMARK 465 HIS B 217 REMARK 465 ASP B 218 REMARK 465 LYS B 219 REMARK 465 ALA B 220 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 CYS A 103 N - CA - C ANGL. DEV. = -20.3 DEGREES REMARK 500 CYS B 103 N - CA - C ANGL. DEV. = -18.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 70 75.20 -160.24 REMARK 500 SER A 88 -147.52 -108.23 REMARK 500 PHE A 141 -62.46 -145.03 REMARK 500 LEU A 244 -82.26 -57.29 REMARK 500 ASN B 70 74.53 -153.37 REMARK 500 SER B 88 -149.62 -110.01 REMARK 500 VAL B 133 -91.01 -64.24 REMARK 500 ASP B 135 -30.78 -164.53 REMARK 500 ASP B 136 159.58 -43.30 REMARK 500 PHE B 141 -53.78 -153.92 REMARK 500 PRO B 212 88.84 -57.88 REMARK 500 ASN B 240 -72.37 -61.98 REMARK 500 SER B 241 -71.44 -58.01 REMARK 500 LEU B 244 -141.41 -58.56 REMARK 500 ALA B 245 132.76 -15.08 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 401 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 106 NE2 REMARK 620 2 HIS A 108 NE2 90.1 REMARK 620 3 GLU A 113 OE1 144.5 114.1 REMARK 620 4 HIS A 188 NE2 82.3 104.6 67.1 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN B 401 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 106 NE2 REMARK 620 2 HIS B 108 NE2 87.6 REMARK 620 3 GLU B 113 OE2 165.4 78.8 REMARK 620 4 HIS B 188 NE2 88.1 110.3 91.5 REMARK 620 5 ROR B 402 O2 106.4 79.2 76.5 163.3 REMARK 620 6 ROR B 402 O1 102.0 154.6 92.5 93.7 75.5 REMARK 620 N 1 2 3 4 5 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3WW2 RELATED DB: PDB REMARK 900 RELATED ID: 3WW3 RELATED DB: PDB REMARK 900 RELATED ID: 3WW4 RELATED DB: PDB DBREF 3WW1 A 2 249 UNP L0N3Y0 L0N3Y0_9CELL 2 249 DBREF 3WW1 B 2 249 UNP L0N3Y0 L0N3Y0_9CELL 2 249 SEQADV 3WW1 HIS A -6 UNP L0N3Y0 EXPRESSION TAG SEQADV 3WW1 HIS A -5 UNP L0N3Y0 EXPRESSION TAG SEQADV 3WW1 HIS A -4 UNP L0N3Y0 EXPRESSION TAG SEQADV 3WW1 HIS A -3 UNP L0N3Y0 EXPRESSION TAG SEQADV 3WW1 HIS A -2 UNP L0N3Y0 EXPRESSION TAG SEQADV 3WW1 HIS A -1 UNP L0N3Y0 EXPRESSION TAG SEQADV 3WW1 GLY A 0 UNP L0N3Y0 EXPRESSION TAG SEQADV 3WW1 SER A 1 UNP L0N3Y0 EXPRESSION TAG SEQADV 3WW1 LEU A 119 UNP L0N3Y0 PHE 119 ENGINEERED MUTATION SEQADV 3WW1 PHE A 125 UNP L0N3Y0 LEU 125 ENGINEERED MUTATION SEQADV 3WW1 HIS B -6 UNP L0N3Y0 EXPRESSION TAG SEQADV 3WW1 HIS B -5 UNP L0N3Y0 EXPRESSION TAG SEQADV 3WW1 HIS B -4 UNP L0N3Y0 EXPRESSION TAG SEQADV 3WW1 HIS B -3 UNP L0N3Y0 EXPRESSION TAG SEQADV 3WW1 HIS B -2 UNP L0N3Y0 EXPRESSION TAG SEQADV 3WW1 HIS B -1 UNP L0N3Y0 EXPRESSION TAG SEQADV 3WW1 GLY B 0 UNP L0N3Y0 EXPRESSION TAG SEQADV 3WW1 SER B 1 UNP L0N3Y0 EXPRESSION TAG SEQADV 3WW1 LEU B 119 UNP L0N3Y0 PHE 119 ENGINEERED MUTATION SEQADV 3WW1 PHE B 125 UNP L0N3Y0 LEU 125 ENGINEERED MUTATION SEQRES 1 A 256 HIS HIS HIS HIS HIS HIS GLY SER THR ARG THR ALA ILE SEQRES 2 A 256 SER ARG ARG GLU TYR ASP GLU TRP LEU SER GLU ALA ALA SEQRES 3 A 256 SER LEU ALA ARG ALA LEU ARG TYR PRO VAL THR PRO GLU SEQRES 4 A 256 MET VAL ASN ASP SER ALA GLY ILE VAL PHE GLY ASP ASP SEQRES 5 A 256 GLN TYR GLU ALA PHE ALA HIS GLY LEU TRP SER ARG GLU SEQRES 6 A 256 PRO TYR GLU VAL MET VAL ILE LEU GLU SER LEU ASN GLU SEQRES 7 A 256 PRO ALA VAL ASP GLY LEU PRO ALA ALA GLY ALA ALA HIS SEQRES 8 A 256 ALA GLU TYR SER GLY LEU CYS ASP LYS LEU MET ILE VAL SEQRES 9 A 256 HIS PRO GLY LYS PHE CYS PRO PRO HIS PHE HIS GLN ARG SEQRES 10 A 256 LYS THR GLU SER TYR GLU VAL VAL LEU GLY GLU MET GLU SEQRES 11 A 256 VAL PHE TYR ALA PRO GLU PRO VAL THR VAL GLY ASP ASP SEQRES 12 A 256 ASP VAL LEU SER PHE SER PRO MET PRO GLU GLY SER PRO SEQRES 13 A 256 TRP PRO GLU GLY VAL ALA LEU PRO ALA GLY ARG GLU ASP SEQRES 14 A 256 SER TYR ALA GLY LEU THR SER TYR VAL ARG LEU ARG ALA SEQRES 15 A 256 GLY ASP PRO LYS PHE VAL MET HIS ARG LYS HIS LEU HIS SEQRES 16 A 256 ALA PHE ARG CYS PRO ALA ASP SER PRO VAL PRO LEU VAL SEQRES 17 A 256 VAL ARG GLU VAL SER THR TYR SER HIS GLU PRO THR GLU SEQRES 18 A 256 HIS ALA HIS ASP LYS ALA ALA PRO LEU PRO GLN TRP ARG SEQRES 19 A 256 GLY LEU HIS ASP ASN THR PHE VAL ALA GLU ALA ALA ASN SEQRES 20 A 256 SER GLY ARG LEU ALA THR ALA ILE ALA SEQRES 1 B 256 HIS HIS HIS HIS HIS HIS GLY SER THR ARG THR ALA ILE SEQRES 2 B 256 SER ARG ARG GLU TYR ASP GLU TRP LEU SER GLU ALA ALA SEQRES 3 B 256 SER LEU ALA ARG ALA LEU ARG TYR PRO VAL THR PRO GLU SEQRES 4 B 256 MET VAL ASN ASP SER ALA GLY ILE VAL PHE GLY ASP ASP SEQRES 5 B 256 GLN TYR GLU ALA PHE ALA HIS GLY LEU TRP SER ARG GLU SEQRES 6 B 256 PRO TYR GLU VAL MET VAL ILE LEU GLU SER LEU ASN GLU SEQRES 7 B 256 PRO ALA VAL ASP GLY LEU PRO ALA ALA GLY ALA ALA HIS SEQRES 8 B 256 ALA GLU TYR SER GLY LEU CYS ASP LYS LEU MET ILE VAL SEQRES 9 B 256 HIS PRO GLY LYS PHE CYS PRO PRO HIS PHE HIS GLN ARG SEQRES 10 B 256 LYS THR GLU SER TYR GLU VAL VAL LEU GLY GLU MET GLU SEQRES 11 B 256 VAL PHE TYR ALA PRO GLU PRO VAL THR VAL GLY ASP ASP SEQRES 12 B 256 ASP VAL LEU SER PHE SER PRO MET PRO GLU GLY SER PRO SEQRES 13 B 256 TRP PRO GLU GLY VAL ALA LEU PRO ALA GLY ARG GLU ASP SEQRES 14 B 256 SER TYR ALA GLY LEU THR SER TYR VAL ARG LEU ARG ALA SEQRES 15 B 256 GLY ASP PRO LYS PHE VAL MET HIS ARG LYS HIS LEU HIS SEQRES 16 B 256 ALA PHE ARG CYS PRO ALA ASP SER PRO VAL PRO LEU VAL SEQRES 17 B 256 VAL ARG GLU VAL SER THR TYR SER HIS GLU PRO THR GLU SEQRES 18 B 256 HIS ALA HIS ASP LYS ALA ALA PRO LEU PRO GLN TRP ARG SEQRES 19 B 256 GLY LEU HIS ASP ASN THR PHE VAL ALA GLU ALA ALA ASN SEQRES 20 B 256 SER GLY ARG LEU ALA THR ALA ILE ALA HET MN A 401 1 HET 0MK A 402 10 HET 0MK A 403 10 HET MN B 401 1 HET ROR B 402 10 HET 0MK B 403 10 HETNAM MN MANGANESE (II) ION HETNAM 0MK BETA-L-RIBOPYRANOSE HETNAM ROR L-RIBOSE HETSYN 0MK BETA-L-RIBOSE; L-RIBOSE; RIBOSE; L-RIBOPYRANOSE FORMUL 3 MN 2(MN 2+) FORMUL 4 0MK 3(C5 H10 O5) FORMUL 7 ROR C5 H10 O5 FORMUL 9 HOH *210(H2 O) HELIX 1 1 ARG A 8 LEU A 25 1 18 HELIX 2 2 THR A 30 VAL A 34 5 5 HELIX 3 3 GLY A 43 TYR A 47 5 5 HELIX 4 4 GLU A 48 GLY A 53 1 6 HELIX 5 5 PRO A 78 SER A 88 5 11 HELIX 6 6 ARG A 160 ALA A 165 5 6 HELIX 7 7 LEU A 223 ARG A 227 5 5 HELIX 8 8 ALA A 238 ARG A 243 1 6 HELIX 9 9 ARG B 8 LEU B 25 1 18 HELIX 10 10 THR B 30 VAL B 34 5 5 HELIX 11 11 GLY B 43 TYR B 47 5 5 HELIX 12 12 GLU B 48 GLY B 53 1 6 HELIX 13 13 PRO B 78 SER B 88 5 11 HELIX 14 14 ARG B 160 ALA B 165 5 6 HELIX 15 15 LEU B 223 ARG B 227 5 5 HELIX 16 16 ALA B 236 GLY B 242 1 7 SHEET 1 A 2 ILE A 6 SER A 7 0 SHEET 2 A 2 ILE A 248 ALA A 249 1 O ALA A 249 N ILE A 6 SHEET 1 B 6 GLY A 39 VAL A 41 0 SHEET 2 B 6 VAL A 62 GLU A 71 -1 O MET A 63 N ILE A 40 SHEET 3 B 6 LEU A 90 VAL A 97 -1 O LEU A 90 N GLU A 71 SHEET 4 B 6 LEU A 200 SER A 206 -1 O LEU A 200 N VAL A 97 SHEET 5 B 6 GLU A 113 LEU A 119 -1 N VAL A 118 O VAL A 201 SHEET 6 B 6 PHE A 180 MET A 182 -1 O MET A 182 N GLU A 113 SHEET 1 C 5 SER A 169 ARG A 174 0 SHEET 2 C 5 GLU A 121 TYR A 126 -1 N MET A 122 O LEU A 173 SHEET 3 C 5 HIS A 188 ARG A 191 -1 O ALA A 189 N PHE A 125 SHEET 4 C 5 PHE A 102 PHE A 107 -1 N CYS A 103 O PHE A 190 SHEET 5 C 5 THR A 233 PHE A 234 -1 O THR A 233 N PHE A 107 SHEET 1 D 2 ILE B 6 SER B 7 0 SHEET 2 D 2 ILE B 248 ALA B 249 1 O ALA B 249 N ILE B 6 SHEET 1 E 6 GLY B 39 VAL B 41 0 SHEET 2 E 6 VAL B 62 GLU B 71 -1 O MET B 63 N ILE B 40 SHEET 3 E 6 LEU B 90 VAL B 97 -1 O LEU B 94 N LEU B 66 SHEET 4 E 6 LEU B 200 SER B 206 -1 O LEU B 200 N VAL B 97 SHEET 5 E 6 GLU B 113 LEU B 119 -1 N GLU B 116 O ARG B 203 SHEET 6 E 6 PHE B 180 MET B 182 -1 O MET B 182 N GLU B 113 SHEET 1 F 5 SER B 169 ARG B 174 0 SHEET 2 F 5 GLU B 121 TYR B 126 -1 N MET B 122 O LEU B 173 SHEET 3 F 5 HIS B 188 ARG B 191 -1 O ALA B 189 N PHE B 125 SHEET 4 F 5 PHE B 102 PHE B 107 -1 N HIS B 106 O HIS B 188 SHEET 5 F 5 THR B 233 PHE B 234 -1 O THR B 233 N PHE B 107 LINK NE2 HIS A 106 MN MN A 401 1555 1555 2.34 LINK NE2 HIS A 108 MN MN A 401 1555 1555 2.16 LINK OE1 GLU A 113 MN MN A 401 1555 1555 2.62 LINK NE2 HIS A 188 MN MN A 401 1555 1555 2.42 LINK NE2 HIS B 106 MN MN B 401 1555 1555 2.33 LINK NE2 HIS B 108 MN MN B 401 1555 1555 2.14 LINK OE2 GLU B 113 MN MN B 401 1555 1555 2.24 LINK NE2 HIS B 188 MN MN B 401 1555 1555 2.44 LINK MN MN B 401 O2 ROR B 402 1555 1555 2.32 LINK MN MN B 401 O1 ROR B 402 1555 1555 2.77 CRYST1 76.730 88.550 152.020 90.00 90.00 90.00 C 2 2 21 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013033 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011293 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006578 0.00000