data_3X0G # _entry.id 3X0G # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.381 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI RCSB RCSB097022 ? ? PDB 3X0G pdb_00003x0g 10.2210/pdb3x0g/pdb WWPDB D_1000097022 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 1G8Q 'CRYSTAL STRUCTURE OF HUMAN CD81 EXTRACELLULAR DOMAIN' unspecified PDB 1IV5 'CRYSTAL STRUCTURE OF HUMAN CD81 EXTRACELLULAR DOMAIN' unspecified PDB 3X0E . unspecified PDB 3X0F . unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3X0G _pdbx_database_status.recvd_initial_deposition_date 2014-10-14 _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Zhang, M.' 1 'Cui, S.' 2 # _citation.id primary _citation.title 'An intramolecular bond at cluster of differentiation 81 ectodomain is important for hepatitis C virus entry.' _citation.journal_abbrev 'Faseb J.' _citation.journal_volume 29 _citation.page_first 4214 _citation.page_last 4226 _citation.year 2015 _citation.journal_id_ASTM FAJOEC _citation.country US _citation.journal_id_ISSN 1530-6860 _citation.journal_id_CSD 2074 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 26116703 _citation.pdbx_database_id_DOI 10.1096/fj.15-272880 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Yang, W.' 1 ? primary 'Zhang, M.' 2 ? primary 'Chi, X.' 3 ? primary 'Liu, X.' 4 ? primary 'Qin, B.' 5 ? primary 'Cui, S.' 6 ? # _cell.entry_id 3X0G _cell.length_a 39.156 _cell.length_b 39.700 _cell.length_c 59.915 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3X0G _symmetry.space_group_name_H-M 'P 21 2 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man CD81 10204.521 1 ? ? 'large extracellular loop' ? 2 non-polymer syn '(4S)-2-METHYL-2,4-PENTANEDIOL' 118.174 3 ? ? ? ? 3 water nat water 18.015 56 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;SHMFVNKDQIAKDVKQFYDQALQQAVVDDDANNAKAVVKTFHETVDCCGSSTLAALTTSVLKNNLCPSGSNIISNLLKKD CHQKIDDFFSGKL ; _entity_poly.pdbx_seq_one_letter_code_can ;SHMFVNKDQIAKDVKQFYDQALQQAVVDDDANNAKAVVKTFHETVDCCGSSTLAALTTSVLKNNLCPSGSNIISNLLKKD CHQKIDDFFSGKL ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 HIS n 1 3 MET n 1 4 PHE n 1 5 VAL n 1 6 ASN n 1 7 LYS n 1 8 ASP n 1 9 GLN n 1 10 ILE n 1 11 ALA n 1 12 LYS n 1 13 ASP n 1 14 VAL n 1 15 LYS n 1 16 GLN n 1 17 PHE n 1 18 TYR n 1 19 ASP n 1 20 GLN n 1 21 ALA n 1 22 LEU n 1 23 GLN n 1 24 GLN n 1 25 ALA n 1 26 VAL n 1 27 VAL n 1 28 ASP n 1 29 ASP n 1 30 ASP n 1 31 ALA n 1 32 ASN n 1 33 ASN n 1 34 ALA n 1 35 LYS n 1 36 ALA n 1 37 VAL n 1 38 VAL n 1 39 LYS n 1 40 THR n 1 41 PHE n 1 42 HIS n 1 43 GLU n 1 44 THR n 1 45 VAL n 1 46 ASP n 1 47 CYS n 1 48 CYS n 1 49 GLY n 1 50 SER n 1 51 SER n 1 52 THR n 1 53 LEU n 1 54 ALA n 1 55 ALA n 1 56 LEU n 1 57 THR n 1 58 THR n 1 59 SER n 1 60 VAL n 1 61 LEU n 1 62 LYS n 1 63 ASN n 1 64 ASN n 1 65 LEU n 1 66 CYS n 1 67 PRO n 1 68 SER n 1 69 GLY n 1 70 SER n 1 71 ASN n 1 72 ILE n 1 73 ILE n 1 74 SER n 1 75 ASN n 1 76 LEU n 1 77 LEU n 1 78 LYS n 1 79 LYS n 1 80 ASP n 1 81 CYS n 1 82 HIS n 1 83 GLN n 1 84 LYS n 1 85 ILE n 1 86 ASP n 1 87 ASP n 1 88 PHE n 1 89 PHE n 1 90 SER n 1 91 GLY n 1 92 LYS n 1 93 LEU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene CD81 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Chlorocebus sabaeus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 60711 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'Rosetta(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET-28a _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 3X0G _struct_ref.pdbx_db_accession 3X0G _struct_ref.entity_id 1 _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3X0G _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 93 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 3X0G _struct_ref_seq.db_align_beg 110 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 202 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 110 _struct_ref_seq.pdbx_auth_seq_align_end 202 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MPD non-polymer . '(4S)-2-METHYL-2,4-PENTANEDIOL' ? 'C6 H14 O2' 118.174 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 3X0G _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.28 _exptl_crystal.density_percent_sol 46.09 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 295 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 8.5 _exptl_crystal_grow.pdbx_details '5% Ethanol, 5% MPD, 0.1M Tris pH 8.5, 200mM Sodium Chloride, VAPOR DIFFUSION, HANGING DROP, temperature 295K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'RIGAKU SATURN 944+' _diffrn_detector.pdbx_collection_date 2014-06-27 _diffrn_detector.details mirrors # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'double crystal Si(111)' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.54 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type 'RIGAKU MICROMAX-007 HF' _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.54 # _reflns.entry_id 3X0G _reflns.observed_criterion_sigma_I -3.0 _reflns.observed_criterion_sigma_F -3.0 _reflns.d_resolution_low 27.878 _reflns.d_resolution_high 1.899 _reflns.number_obs 7580 _reflns.number_all 7800 _reflns.percent_possible_obs 97.2 _reflns.pdbx_Rmerge_I_obs 0.064 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 21.28 _reflns.B_iso_Wilson_estimate 31.196 _reflns.pdbx_redundancy 5.93 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 1.9 _reflns_shell.d_res_low 2.01 _reflns_shell.percent_possible_all 83.1 _reflns_shell.Rmerge_I_obs 0.485 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 2.42 _reflns_shell.pdbx_redundancy 2.52 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 1219 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.number_possible ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.meanI_over_sigI_all ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 3X0G _refine.ls_number_reflns_obs 7565 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.35 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 25.276 _refine.ls_d_res_high 1.899 _refine.ls_percent_reflns_obs 97.12 _refine.ls_R_factor_obs 0.2320 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.2309 _refine.ls_R_factor_R_free 0.2543 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.59 _refine.ls_number_reflns_R_free 347 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 30.81 _refine.aniso_B[1][1] -5.0533 _refine.aniso_B[2][2] 0.8344 _refine.aniso_B[3][3] 4.2189 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] 0.0000 _refine.aniso_B[2][3] 0.0000 _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_ksol 0.327 _refine.solvent_model_param_bsol 33.585 _refine.pdbx_solvent_vdw_probe_radii 1.10 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.86 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model 4BKH _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.19 _refine.pdbx_overall_phase_error 28.44 _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 712 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 24 _refine_hist.number_atoms_solvent 56 _refine_hist.number_atoms_total 792 _refine_hist.d_res_high 1.899 _refine_hist.d_res_low 25.276 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id f_bond_d 0.009 ? ? 751 ? 'X-RAY DIFFRACTION' f_angle_d 1.163 ? ? 1012 ? 'X-RAY DIFFRACTION' f_dihedral_angle_d 17.478 ? ? 270 ? 'X-RAY DIFFRACTION' f_chiral_restr 0.065 ? ? 120 ? 'X-RAY DIFFRACTION' f_plane_restr 0.004 ? ? 127 ? 'X-RAY DIFFRACTION' # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.redundancy_reflns_obs 'X-RAY DIFFRACTION' 2 1.8995 2.3928 3440 0.2419 94.00 0.2711 . . 157 . . . . 'X-RAY DIFFRACTION' 2 2.3928 25.2780 3778 0.2271 100.00 0.2485 . . 190 . . . . # _struct.entry_id 3X0G _struct.title 'Crystal structure of the ectodomain of African green monkey CD81 large extracellular loop (agmCD81-LEL)' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3X0G _struct_keywords.pdbx_keywords 'CELL ADHESION' _struct_keywords.text ;disulfide bond, helical bundle, immune cell adhesion, morphology, activation, proliferation, differentiation, Membrane, CELL ADHESION ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 2 ? E N N 3 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASN A 6 ? ASP A 28 ? ASN A 115 ASP A 137 1 ? 23 HELX_P HELX_P2 2 ALA A 31 ? ASP A 46 ? ALA A 140 ASP A 155 1 ? 16 HELX_P HELX_P3 3 LEU A 56 ? ASN A 63 ? LEU A 165 ASN A 172 1 ? 8 HELX_P HELX_P4 4 ILE A 73 ? LYS A 78 ? ILE A 182 LYS A 187 5 ? 6 HELX_P HELX_P5 5 ASP A 80 ? GLY A 91 ? ASP A 189 GLY A 200 1 ? 12 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 47 SG ? ? ? 1_555 A CYS 81 SG ? ? A CYS 156 A CYS 190 1_555 ? ? ? ? ? ? ? 2.030 ? ? disulf2 disulf ? ? A CYS 48 SG ? ? ? 1_555 A CYS 66 SG ? ? A CYS 157 A CYS 175 1_555 ? ? ? ? ? ? ? 2.011 ? ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A MPD 301 ? 6 'BINDING SITE FOR RESIDUE MPD A 301' AC2 Software A MPD 302 ? 8 'BINDING SITE FOR RESIDUE MPD A 302' AC3 Software A MPD 303 ? 5 'BINDING SITE FOR RESIDUE MPD A 303' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 6 VAL A 45 ? VAL A 154 . ? 1_555 ? 2 AC1 6 ILE A 85 ? ILE A 194 . ? 1_555 ? 3 AC1 6 PHE A 88 ? PHE A 197 . ? 1_555 ? 4 AC1 6 PHE A 89 ? PHE A 198 . ? 1_555 ? 5 AC1 6 MPD C . ? MPD A 302 . ? 1_555 ? 6 AC1 6 MPD D . ? MPD A 303 . ? 1_555 ? 7 AC2 8 PHE A 17 ? PHE A 126 . ? 2_655 ? 8 AC2 8 PHE A 41 ? PHE A 150 . ? 1_555 ? 9 AC2 8 VAL A 45 ? VAL A 154 . ? 1_555 ? 10 AC2 8 LEU A 76 ? LEU A 185 . ? 3_554 ? 11 AC2 8 MPD B . ? MPD A 301 . ? 1_555 ? 12 AC2 8 MPD D . ? MPD A 303 . ? 2_655 ? 13 AC2 8 MPD D . ? MPD A 303 . ? 1_555 ? 14 AC2 8 HOH E . ? HOH A 456 . ? 1_555 ? 15 AC3 5 VAL A 14 ? VAL A 123 . ? 1_555 ? 16 AC3 5 PHE A 41 ? PHE A 150 . ? 1_555 ? 17 AC3 5 MPD B . ? MPD A 301 . ? 1_555 ? 18 AC3 5 MPD C . ? MPD A 302 . ? 1_555 ? 19 AC3 5 MPD C . ? MPD A 302 . ? 2_655 ? # _database_PDB_matrix.entry_id 3X0G _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3X0G _atom_sites.fract_transf_matrix[1][1] 0.025539 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.025189 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.016690 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 110 110 SER SER A . n A 1 2 HIS 2 111 111 HIS HIS A . n A 1 3 MET 3 112 112 MET MET A . n A 1 4 PHE 4 113 113 PHE PHE A . n A 1 5 VAL 5 114 114 VAL VAL A . n A 1 6 ASN 6 115 115 ASN ASN A . n A 1 7 LYS 7 116 116 LYS LYS A . n A 1 8 ASP 8 117 117 ASP ASP A . n A 1 9 GLN 9 118 118 GLN GLN A . n A 1 10 ILE 10 119 119 ILE ILE A . n A 1 11 ALA 11 120 120 ALA ALA A . n A 1 12 LYS 12 121 121 LYS LYS A . n A 1 13 ASP 13 122 122 ASP ASP A . n A 1 14 VAL 14 123 123 VAL VAL A . n A 1 15 LYS 15 124 124 LYS LYS A . n A 1 16 GLN 16 125 125 GLN GLN A . n A 1 17 PHE 17 126 126 PHE PHE A . n A 1 18 TYR 18 127 127 TYR TYR A . n A 1 19 ASP 19 128 128 ASP ASP A . n A 1 20 GLN 20 129 129 GLN GLN A . n A 1 21 ALA 21 130 130 ALA ALA A . n A 1 22 LEU 22 131 131 LEU LEU A . n A 1 23 GLN 23 132 132 GLN GLN A . n A 1 24 GLN 24 133 133 GLN GLN A . n A 1 25 ALA 25 134 134 ALA ALA A . n A 1 26 VAL 26 135 135 VAL VAL A . n A 1 27 VAL 27 136 136 VAL VAL A . n A 1 28 ASP 28 137 137 ASP ASP A . n A 1 29 ASP 29 138 138 ASP ASP A . n A 1 30 ASP 30 139 139 ASP ASP A . n A 1 31 ALA 31 140 140 ALA ALA A . n A 1 32 ASN 32 141 141 ASN ASN A . n A 1 33 ASN 33 142 142 ASN ASN A . n A 1 34 ALA 34 143 143 ALA ALA A . n A 1 35 LYS 35 144 144 LYS LYS A . n A 1 36 ALA 36 145 145 ALA ALA A . n A 1 37 VAL 37 146 146 VAL VAL A . n A 1 38 VAL 38 147 147 VAL VAL A . n A 1 39 LYS 39 148 148 LYS LYS A . n A 1 40 THR 40 149 149 THR THR A . n A 1 41 PHE 41 150 150 PHE PHE A . n A 1 42 HIS 42 151 151 HIS HIS A . n A 1 43 GLU 43 152 152 GLU GLU A . n A 1 44 THR 44 153 153 THR THR A . n A 1 45 VAL 45 154 154 VAL VAL A . n A 1 46 ASP 46 155 155 ASP ASP A . n A 1 47 CYS 47 156 156 CYS CYS A . n A 1 48 CYS 48 157 157 CYS CYS A . n A 1 49 GLY 49 158 158 GLY GLY A . n A 1 50 SER 50 159 159 SER SER A . n A 1 51 SER 51 160 160 SER SER A . n A 1 52 THR 52 161 161 THR THR A . n A 1 53 LEU 53 162 162 LEU LEU A . n A 1 54 ALA 54 163 163 ALA ALA A . n A 1 55 ALA 55 164 164 ALA ALA A . n A 1 56 LEU 56 165 165 LEU LEU A . n A 1 57 THR 57 166 166 THR THR A . n A 1 58 THR 58 167 167 THR THR A . n A 1 59 SER 59 168 168 SER SER A . n A 1 60 VAL 60 169 169 VAL VAL A . n A 1 61 LEU 61 170 170 LEU LEU A . n A 1 62 LYS 62 171 171 LYS LYS A . n A 1 63 ASN 63 172 172 ASN ASN A . n A 1 64 ASN 64 173 173 ASN ASN A . n A 1 65 LEU 65 174 174 LEU LEU A . n A 1 66 CYS 66 175 175 CYS CYS A . n A 1 67 PRO 67 176 176 PRO PRO A . n A 1 68 SER 68 177 177 SER SER A . n A 1 69 GLY 69 178 178 GLY GLY A . n A 1 70 SER 70 179 179 SER SER A . n A 1 71 ASN 71 180 180 ASN ASN A . n A 1 72 ILE 72 181 181 ILE ILE A . n A 1 73 ILE 73 182 182 ILE ILE A . n A 1 74 SER 74 183 183 SER SER A . n A 1 75 ASN 75 184 184 ASN ASN A . n A 1 76 LEU 76 185 185 LEU LEU A . n A 1 77 LEU 77 186 186 LEU LEU A . n A 1 78 LYS 78 187 187 LYS LYS A . n A 1 79 LYS 79 188 188 LYS LYS A . n A 1 80 ASP 80 189 189 ASP ASP A . n A 1 81 CYS 81 190 190 CYS CYS A . n A 1 82 HIS 82 191 191 HIS HIS A . n A 1 83 GLN 83 192 192 GLN GLN A . n A 1 84 LYS 84 193 193 LYS LYS A . n A 1 85 ILE 85 194 194 ILE ILE A . n A 1 86 ASP 86 195 195 ASP ASP A . n A 1 87 ASP 87 196 196 ASP ASP A . n A 1 88 PHE 88 197 197 PHE PHE A . n A 1 89 PHE 89 198 198 PHE PHE A . n A 1 90 SER 90 199 199 SER SER A . n A 1 91 GLY 91 200 200 GLY GLY A . n A 1 92 LYS 92 201 201 LYS LYS A . n A 1 93 LEU 93 202 202 LEU LEU A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MPD 1 301 1 MPD MPD A . C 2 MPD 1 302 2 MPD MPD A . D 2 MPD 1 303 3 MPD MPD A . E 3 HOH 1 401 1 HOH HOH A . E 3 HOH 2 402 2 HOH HOH A . E 3 HOH 3 403 3 HOH HOH A . E 3 HOH 4 404 4 HOH HOH A . E 3 HOH 5 405 5 HOH HOH A . E 3 HOH 6 406 6 HOH HOH A . E 3 HOH 7 407 7 HOH HOH A . E 3 HOH 8 408 8 HOH HOH A . E 3 HOH 9 409 9 HOH HOH A . E 3 HOH 10 410 10 HOH HOH A . E 3 HOH 11 411 11 HOH HOH A . E 3 HOH 12 412 12 HOH HOH A . E 3 HOH 13 413 13 HOH HOH A . E 3 HOH 14 414 14 HOH HOH A . E 3 HOH 15 415 15 HOH HOH A . E 3 HOH 16 416 16 HOH HOH A . E 3 HOH 17 417 17 HOH HOH A . E 3 HOH 18 418 18 HOH HOH A . E 3 HOH 19 419 19 HOH HOH A . E 3 HOH 20 420 20 HOH HOH A . E 3 HOH 21 421 21 HOH HOH A . E 3 HOH 22 422 22 HOH HOH A . E 3 HOH 23 423 23 HOH HOH A . E 3 HOH 24 424 24 HOH HOH A . E 3 HOH 25 425 25 HOH HOH A . E 3 HOH 26 426 26 HOH HOH A . E 3 HOH 27 427 27 HOH HOH A . E 3 HOH 28 428 28 HOH HOH A . E 3 HOH 29 429 29 HOH HOH A . E 3 HOH 30 430 30 HOH HOH A . E 3 HOH 31 431 31 HOH HOH A . E 3 HOH 32 432 32 HOH HOH A . E 3 HOH 33 433 33 HOH HOH A . E 3 HOH 34 434 34 HOH HOH A . E 3 HOH 35 435 35 HOH HOH A . E 3 HOH 36 436 36 HOH HOH A . E 3 HOH 37 437 37 HOH HOH A . E 3 HOH 38 438 38 HOH HOH A . E 3 HOH 39 439 39 HOH HOH A . E 3 HOH 40 440 40 HOH HOH A . E 3 HOH 41 441 41 HOH HOH A . E 3 HOH 42 442 42 HOH HOH A . E 3 HOH 43 443 43 HOH HOH A . E 3 HOH 44 444 44 HOH HOH A . E 3 HOH 45 445 45 HOH HOH A . E 3 HOH 46 446 46 HOH HOH A . E 3 HOH 47 447 47 HOH HOH A . E 3 HOH 48 448 48 HOH HOH A . E 3 HOH 49 449 49 HOH HOH A . E 3 HOH 50 450 51 HOH HOH A . E 3 HOH 51 451 52 HOH HOH A . E 3 HOH 52 452 57 HOH HOH A . E 3 HOH 53 453 58 HOH HOH A . E 3 HOH 54 454 59 HOH HOH A . E 3 HOH 55 455 61 HOH HOH A . E 3 HOH 56 456 62 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 3620 ? 1 MORE -94 ? 1 'SSA (A^2)' 10650 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 2_655 -x+1,y,-z -1.0000000000 0.0000000000 0.0000000000 39.1560000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2015-07-01 2 'Structure model' 1 1 2015-07-08 3 'Structure model' 1 2 2022-08-24 4 'Structure model' 1 3 2023-11-08 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Database references' 3 3 'Structure model' 'Derived calculations' 4 4 'Structure model' 'Data collection' 5 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' citation 2 3 'Structure model' database_2 3 3 'Structure model' struct_site 4 4 'Structure model' chem_comp_atom 5 4 'Structure model' chem_comp_bond 6 4 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_citation.journal_volume' 2 3 'Structure model' '_citation.page_first' 3 3 'Structure model' '_citation.page_last' 4 3 'Structure model' '_citation.title' 5 3 'Structure model' '_database_2.pdbx_DOI' 6 3 'Structure model' '_database_2.pdbx_database_accession' 7 3 'Structure model' '_struct_site.pdbx_auth_asym_id' 8 3 'Structure model' '_struct_site.pdbx_auth_comp_id' 9 3 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal CrystalClear 'data collection' . ? 1 PHASER phasing . ? 2 PHENIX refinement '(phenix.refine: 1.7.3_928)' ? 3 XDS 'data reduction' package ? 4 XDS 'data scaling' package ? 5 # _pdbx_entry_details.entry_id 3X0G _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details 'THE SEQUENCE OF THIS PROTEIN WAS NOT AVAILABLE AT THE UNIPROT KNOWLEDGEBASE DATABASE (UNIPROTKB) AT THE TIME OF DEPOSITION.' _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest ? # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O4 A MPD 301 ? ? HO2 A MPD 303 ? ? 1.36 2 1 O A HOH 422 ? ? O A HOH 430 ? ? 1.93 3 1 O A HOH 444 ? ? O A HOH 455 ? ? 1.95 4 1 O A HOH 445 ? ? O A HOH 447 ? ? 2.12 5 1 O4 A MPD 301 ? ? O2 A MPD 303 ? ? 2.19 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 0 A ASP 138 ? CG ? A ASP 29 CG 2 1 Y 0 A ASP 138 ? OD1 ? A ASP 29 OD1 3 1 Y 0 A ASP 138 ? OD2 ? A ASP 29 OD2 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ASN N N N N 14 ASN CA C N S 15 ASN C C N N 16 ASN O O N N 17 ASN CB C N N 18 ASN CG C N N 19 ASN OD1 O N N 20 ASN ND2 N N N 21 ASN OXT O N N 22 ASN H H N N 23 ASN H2 H N N 24 ASN HA H N N 25 ASN HB2 H N N 26 ASN HB3 H N N 27 ASN HD21 H N N 28 ASN HD22 H N N 29 ASN HXT H N N 30 ASP N N N N 31 ASP CA C N S 32 ASP C C N N 33 ASP O O N N 34 ASP CB C N N 35 ASP CG C N N 36 ASP OD1 O N N 37 ASP OD2 O N N 38 ASP OXT O N N 39 ASP H H N N 40 ASP H2 H N N 41 ASP HA H N N 42 ASP HB2 H N N 43 ASP HB3 H N N 44 ASP HD2 H N N 45 ASP HXT H N N 46 CYS N N N N 47 CYS CA C N R 48 CYS C C N N 49 CYS O O N N 50 CYS CB C N N 51 CYS SG S N N 52 CYS OXT O N N 53 CYS H H N N 54 CYS H2 H N N 55 CYS HA H N N 56 CYS HB2 H N N 57 CYS HB3 H N N 58 CYS HG H N N 59 CYS HXT H N N 60 GLN N N N N 61 GLN CA C N S 62 GLN C C N N 63 GLN O O N N 64 GLN CB C N N 65 GLN CG C N N 66 GLN CD C N N 67 GLN OE1 O N N 68 GLN NE2 N N N 69 GLN OXT O N N 70 GLN H H N N 71 GLN H2 H N N 72 GLN HA H N N 73 GLN HB2 H N N 74 GLN HB3 H N N 75 GLN HG2 H N N 76 GLN HG3 H N N 77 GLN HE21 H N N 78 GLN HE22 H N N 79 GLN HXT H N N 80 GLU N N N N 81 GLU CA C N S 82 GLU C C N N 83 GLU O O N N 84 GLU CB C N N 85 GLU CG C N N 86 GLU CD C N N 87 GLU OE1 O N N 88 GLU OE2 O N N 89 GLU OXT O N N 90 GLU H H N N 91 GLU H2 H N N 92 GLU HA H N N 93 GLU HB2 H N N 94 GLU HB3 H N N 95 GLU HG2 H N N 96 GLU HG3 H N N 97 GLU HE2 H N N 98 GLU HXT H N N 99 GLY N N N N 100 GLY CA C N N 101 GLY C C N N 102 GLY O O N N 103 GLY OXT O N N 104 GLY H H N N 105 GLY H2 H N N 106 GLY HA2 H N N 107 GLY HA3 H N N 108 GLY HXT H N N 109 HIS N N N N 110 HIS CA C N S 111 HIS C C N N 112 HIS O O N N 113 HIS CB C N N 114 HIS CG C Y N 115 HIS ND1 N Y N 116 HIS CD2 C Y N 117 HIS CE1 C Y N 118 HIS NE2 N Y N 119 HIS OXT O N N 120 HIS H H N N 121 HIS H2 H N N 122 HIS HA H N N 123 HIS HB2 H N N 124 HIS HB3 H N N 125 HIS HD1 H N N 126 HIS HD2 H N N 127 HIS HE1 H N N 128 HIS HE2 H N N 129 HIS HXT H N N 130 HOH O O N N 131 HOH H1 H N N 132 HOH H2 H N N 133 ILE N N N N 134 ILE CA C N S 135 ILE C C N N 136 ILE O O N N 137 ILE CB C N S 138 ILE CG1 C N N 139 ILE CG2 C N N 140 ILE CD1 C N N 141 ILE OXT O N N 142 ILE H H N N 143 ILE H2 H N N 144 ILE HA H N N 145 ILE HB H N N 146 ILE HG12 H N N 147 ILE HG13 H N N 148 ILE HG21 H N N 149 ILE HG22 H N N 150 ILE HG23 H N N 151 ILE HD11 H N N 152 ILE HD12 H N N 153 ILE HD13 H N N 154 ILE HXT H N N 155 LEU N N N N 156 LEU CA C N S 157 LEU C C N N 158 LEU O O N N 159 LEU CB C N N 160 LEU CG C N N 161 LEU CD1 C N N 162 LEU CD2 C N N 163 LEU OXT O N N 164 LEU H H N N 165 LEU H2 H N N 166 LEU HA H N N 167 LEU HB2 H N N 168 LEU HB3 H N N 169 LEU HG H N N 170 LEU HD11 H N N 171 LEU HD12 H N N 172 LEU HD13 H N N 173 LEU HD21 H N N 174 LEU HD22 H N N 175 LEU HD23 H N N 176 LEU HXT H N N 177 LYS N N N N 178 LYS CA C N S 179 LYS C C N N 180 LYS O O N N 181 LYS CB C N N 182 LYS CG C N N 183 LYS CD C N N 184 LYS CE C N N 185 LYS NZ N N N 186 LYS OXT O N N 187 LYS H H N N 188 LYS H2 H N N 189 LYS HA H N N 190 LYS HB2 H N N 191 LYS HB3 H N N 192 LYS HG2 H N N 193 LYS HG3 H N N 194 LYS HD2 H N N 195 LYS HD3 H N N 196 LYS HE2 H N N 197 LYS HE3 H N N 198 LYS HZ1 H N N 199 LYS HZ2 H N N 200 LYS HZ3 H N N 201 LYS HXT H N N 202 MET N N N N 203 MET CA C N S 204 MET C C N N 205 MET O O N N 206 MET CB C N N 207 MET CG C N N 208 MET SD S N N 209 MET CE C N N 210 MET OXT O N N 211 MET H H N N 212 MET H2 H N N 213 MET HA H N N 214 MET HB2 H N N 215 MET HB3 H N N 216 MET HG2 H N N 217 MET HG3 H N N 218 MET HE1 H N N 219 MET HE2 H N N 220 MET HE3 H N N 221 MET HXT H N N 222 MPD C1 C N N 223 MPD C2 C N N 224 MPD O2 O N N 225 MPD CM C N N 226 MPD C3 C N N 227 MPD C4 C N S 228 MPD O4 O N N 229 MPD C5 C N N 230 MPD H11 H N N 231 MPD H12 H N N 232 MPD H13 H N N 233 MPD HO2 H N N 234 MPD HM1 H N N 235 MPD HM2 H N N 236 MPD HM3 H N N 237 MPD H31 H N N 238 MPD H32 H N N 239 MPD H4 H N N 240 MPD HO4 H N N 241 MPD H51 H N N 242 MPD H52 H N N 243 MPD H53 H N N 244 PHE N N N N 245 PHE CA C N S 246 PHE C C N N 247 PHE O O N N 248 PHE CB C N N 249 PHE CG C Y N 250 PHE CD1 C Y N 251 PHE CD2 C Y N 252 PHE CE1 C Y N 253 PHE CE2 C Y N 254 PHE CZ C Y N 255 PHE OXT O N N 256 PHE H H N N 257 PHE H2 H N N 258 PHE HA H N N 259 PHE HB2 H N N 260 PHE HB3 H N N 261 PHE HD1 H N N 262 PHE HD2 H N N 263 PHE HE1 H N N 264 PHE HE2 H N N 265 PHE HZ H N N 266 PHE HXT H N N 267 PRO N N N N 268 PRO CA C N S 269 PRO C C N N 270 PRO O O N N 271 PRO CB C N N 272 PRO CG C N N 273 PRO CD C N N 274 PRO OXT O N N 275 PRO H H N N 276 PRO HA H N N 277 PRO HB2 H N N 278 PRO HB3 H N N 279 PRO HG2 H N N 280 PRO HG3 H N N 281 PRO HD2 H N N 282 PRO HD3 H N N 283 PRO HXT H N N 284 SER N N N N 285 SER CA C N S 286 SER C C N N 287 SER O O N N 288 SER CB C N N 289 SER OG O N N 290 SER OXT O N N 291 SER H H N N 292 SER H2 H N N 293 SER HA H N N 294 SER HB2 H N N 295 SER HB3 H N N 296 SER HG H N N 297 SER HXT H N N 298 THR N N N N 299 THR CA C N S 300 THR C C N N 301 THR O O N N 302 THR CB C N R 303 THR OG1 O N N 304 THR CG2 C N N 305 THR OXT O N N 306 THR H H N N 307 THR H2 H N N 308 THR HA H N N 309 THR HB H N N 310 THR HG1 H N N 311 THR HG21 H N N 312 THR HG22 H N N 313 THR HG23 H N N 314 THR HXT H N N 315 TYR N N N N 316 TYR CA C N S 317 TYR C C N N 318 TYR O O N N 319 TYR CB C N N 320 TYR CG C Y N 321 TYR CD1 C Y N 322 TYR CD2 C Y N 323 TYR CE1 C Y N 324 TYR CE2 C Y N 325 TYR CZ C Y N 326 TYR OH O N N 327 TYR OXT O N N 328 TYR H H N N 329 TYR H2 H N N 330 TYR HA H N N 331 TYR HB2 H N N 332 TYR HB3 H N N 333 TYR HD1 H N N 334 TYR HD2 H N N 335 TYR HE1 H N N 336 TYR HE2 H N N 337 TYR HH H N N 338 TYR HXT H N N 339 VAL N N N N 340 VAL CA C N S 341 VAL C C N N 342 VAL O O N N 343 VAL CB C N N 344 VAL CG1 C N N 345 VAL CG2 C N N 346 VAL OXT O N N 347 VAL H H N N 348 VAL H2 H N N 349 VAL HA H N N 350 VAL HB H N N 351 VAL HG11 H N N 352 VAL HG12 H N N 353 VAL HG13 H N N 354 VAL HG21 H N N 355 VAL HG22 H N N 356 VAL HG23 H N N 357 VAL HXT H N N 358 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ASN N CA sing N N 13 ASN N H sing N N 14 ASN N H2 sing N N 15 ASN CA C sing N N 16 ASN CA CB sing N N 17 ASN CA HA sing N N 18 ASN C O doub N N 19 ASN C OXT sing N N 20 ASN CB CG sing N N 21 ASN CB HB2 sing N N 22 ASN CB HB3 sing N N 23 ASN CG OD1 doub N N 24 ASN CG ND2 sing N N 25 ASN ND2 HD21 sing N N 26 ASN ND2 HD22 sing N N 27 ASN OXT HXT sing N N 28 ASP N CA sing N N 29 ASP N H sing N N 30 ASP N H2 sing N N 31 ASP CA C sing N N 32 ASP CA CB sing N N 33 ASP CA HA sing N N 34 ASP C O doub N N 35 ASP C OXT sing N N 36 ASP CB CG sing N N 37 ASP CB HB2 sing N N 38 ASP CB HB3 sing N N 39 ASP CG OD1 doub N N 40 ASP CG OD2 sing N N 41 ASP OD2 HD2 sing N N 42 ASP OXT HXT sing N N 43 CYS N CA sing N N 44 CYS N H sing N N 45 CYS N H2 sing N N 46 CYS CA C sing N N 47 CYS CA CB sing N N 48 CYS CA HA sing N N 49 CYS C O doub N N 50 CYS C OXT sing N N 51 CYS CB SG sing N N 52 CYS CB HB2 sing N N 53 CYS CB HB3 sing N N 54 CYS SG HG sing N N 55 CYS OXT HXT sing N N 56 GLN N CA sing N N 57 GLN N H sing N N 58 GLN N H2 sing N N 59 GLN CA C sing N N 60 GLN CA CB sing N N 61 GLN CA HA sing N N 62 GLN C O doub N N 63 GLN C OXT sing N N 64 GLN CB CG sing N N 65 GLN CB HB2 sing N N 66 GLN CB HB3 sing N N 67 GLN CG CD sing N N 68 GLN CG HG2 sing N N 69 GLN CG HG3 sing N N 70 GLN CD OE1 doub N N 71 GLN CD NE2 sing N N 72 GLN NE2 HE21 sing N N 73 GLN NE2 HE22 sing N N 74 GLN OXT HXT sing N N 75 GLU N CA sing N N 76 GLU N H sing N N 77 GLU N H2 sing N N 78 GLU CA C sing N N 79 GLU CA CB sing N N 80 GLU CA HA sing N N 81 GLU C O doub N N 82 GLU C OXT sing N N 83 GLU CB CG sing N N 84 GLU CB HB2 sing N N 85 GLU CB HB3 sing N N 86 GLU CG CD sing N N 87 GLU CG HG2 sing N N 88 GLU CG HG3 sing N N 89 GLU CD OE1 doub N N 90 GLU CD OE2 sing N N 91 GLU OE2 HE2 sing N N 92 GLU OXT HXT sing N N 93 GLY N CA sing N N 94 GLY N H sing N N 95 GLY N H2 sing N N 96 GLY CA C sing N N 97 GLY CA HA2 sing N N 98 GLY CA HA3 sing N N 99 GLY C O doub N N 100 GLY C OXT sing N N 101 GLY OXT HXT sing N N 102 HIS N CA sing N N 103 HIS N H sing N N 104 HIS N H2 sing N N 105 HIS CA C sing N N 106 HIS CA CB sing N N 107 HIS CA HA sing N N 108 HIS C O doub N N 109 HIS C OXT sing N N 110 HIS CB CG sing N N 111 HIS CB HB2 sing N N 112 HIS CB HB3 sing N N 113 HIS CG ND1 sing Y N 114 HIS CG CD2 doub Y N 115 HIS ND1 CE1 doub Y N 116 HIS ND1 HD1 sing N N 117 HIS CD2 NE2 sing Y N 118 HIS CD2 HD2 sing N N 119 HIS CE1 NE2 sing Y N 120 HIS CE1 HE1 sing N N 121 HIS NE2 HE2 sing N N 122 HIS OXT HXT sing N N 123 HOH O H1 sing N N 124 HOH O H2 sing N N 125 ILE N CA sing N N 126 ILE N H sing N N 127 ILE N H2 sing N N 128 ILE CA C sing N N 129 ILE CA CB sing N N 130 ILE CA HA sing N N 131 ILE C O doub N N 132 ILE C OXT sing N N 133 ILE CB CG1 sing N N 134 ILE CB CG2 sing N N 135 ILE CB HB sing N N 136 ILE CG1 CD1 sing N N 137 ILE CG1 HG12 sing N N 138 ILE CG1 HG13 sing N N 139 ILE CG2 HG21 sing N N 140 ILE CG2 HG22 sing N N 141 ILE CG2 HG23 sing N N 142 ILE CD1 HD11 sing N N 143 ILE CD1 HD12 sing N N 144 ILE CD1 HD13 sing N N 145 ILE OXT HXT sing N N 146 LEU N CA sing N N 147 LEU N H sing N N 148 LEU N H2 sing N N 149 LEU CA C sing N N 150 LEU CA CB sing N N 151 LEU CA HA sing N N 152 LEU C O doub N N 153 LEU C OXT sing N N 154 LEU CB CG sing N N 155 LEU CB HB2 sing N N 156 LEU CB HB3 sing N N 157 LEU CG CD1 sing N N 158 LEU CG CD2 sing N N 159 LEU CG HG sing N N 160 LEU CD1 HD11 sing N N 161 LEU CD1 HD12 sing N N 162 LEU CD1 HD13 sing N N 163 LEU CD2 HD21 sing N N 164 LEU CD2 HD22 sing N N 165 LEU CD2 HD23 sing N N 166 LEU OXT HXT sing N N 167 LYS N CA sing N N 168 LYS N H sing N N 169 LYS N H2 sing N N 170 LYS CA C sing N N 171 LYS CA CB sing N N 172 LYS CA HA sing N N 173 LYS C O doub N N 174 LYS C OXT sing N N 175 LYS CB CG sing N N 176 LYS CB HB2 sing N N 177 LYS CB HB3 sing N N 178 LYS CG CD sing N N 179 LYS CG HG2 sing N N 180 LYS CG HG3 sing N N 181 LYS CD CE sing N N 182 LYS CD HD2 sing N N 183 LYS CD HD3 sing N N 184 LYS CE NZ sing N N 185 LYS CE HE2 sing N N 186 LYS CE HE3 sing N N 187 LYS NZ HZ1 sing N N 188 LYS NZ HZ2 sing N N 189 LYS NZ HZ3 sing N N 190 LYS OXT HXT sing N N 191 MET N CA sing N N 192 MET N H sing N N 193 MET N H2 sing N N 194 MET CA C sing N N 195 MET CA CB sing N N 196 MET CA HA sing N N 197 MET C O doub N N 198 MET C OXT sing N N 199 MET CB CG sing N N 200 MET CB HB2 sing N N 201 MET CB HB3 sing N N 202 MET CG SD sing N N 203 MET CG HG2 sing N N 204 MET CG HG3 sing N N 205 MET SD CE sing N N 206 MET CE HE1 sing N N 207 MET CE HE2 sing N N 208 MET CE HE3 sing N N 209 MET OXT HXT sing N N 210 MPD C1 C2 sing N N 211 MPD C1 H11 sing N N 212 MPD C1 H12 sing N N 213 MPD C1 H13 sing N N 214 MPD C2 O2 sing N N 215 MPD C2 CM sing N N 216 MPD C2 C3 sing N N 217 MPD O2 HO2 sing N N 218 MPD CM HM1 sing N N 219 MPD CM HM2 sing N N 220 MPD CM HM3 sing N N 221 MPD C3 C4 sing N N 222 MPD C3 H31 sing N N 223 MPD C3 H32 sing N N 224 MPD C4 O4 sing N N 225 MPD C4 C5 sing N N 226 MPD C4 H4 sing N N 227 MPD O4 HO4 sing N N 228 MPD C5 H51 sing N N 229 MPD C5 H52 sing N N 230 MPD C5 H53 sing N N 231 PHE N CA sing N N 232 PHE N H sing N N 233 PHE N H2 sing N N 234 PHE CA C sing N N 235 PHE CA CB sing N N 236 PHE CA HA sing N N 237 PHE C O doub N N 238 PHE C OXT sing N N 239 PHE CB CG sing N N 240 PHE CB HB2 sing N N 241 PHE CB HB3 sing N N 242 PHE CG CD1 doub Y N 243 PHE CG CD2 sing Y N 244 PHE CD1 CE1 sing Y N 245 PHE CD1 HD1 sing N N 246 PHE CD2 CE2 doub Y N 247 PHE CD2 HD2 sing N N 248 PHE CE1 CZ doub Y N 249 PHE CE1 HE1 sing N N 250 PHE CE2 CZ sing Y N 251 PHE CE2 HE2 sing N N 252 PHE CZ HZ sing N N 253 PHE OXT HXT sing N N 254 PRO N CA sing N N 255 PRO N CD sing N N 256 PRO N H sing N N 257 PRO CA C sing N N 258 PRO CA CB sing N N 259 PRO CA HA sing N N 260 PRO C O doub N N 261 PRO C OXT sing N N 262 PRO CB CG sing N N 263 PRO CB HB2 sing N N 264 PRO CB HB3 sing N N 265 PRO CG CD sing N N 266 PRO CG HG2 sing N N 267 PRO CG HG3 sing N N 268 PRO CD HD2 sing N N 269 PRO CD HD3 sing N N 270 PRO OXT HXT sing N N 271 SER N CA sing N N 272 SER N H sing N N 273 SER N H2 sing N N 274 SER CA C sing N N 275 SER CA CB sing N N 276 SER CA HA sing N N 277 SER C O doub N N 278 SER C OXT sing N N 279 SER CB OG sing N N 280 SER CB HB2 sing N N 281 SER CB HB3 sing N N 282 SER OG HG sing N N 283 SER OXT HXT sing N N 284 THR N CA sing N N 285 THR N H sing N N 286 THR N H2 sing N N 287 THR CA C sing N N 288 THR CA CB sing N N 289 THR CA HA sing N N 290 THR C O doub N N 291 THR C OXT sing N N 292 THR CB OG1 sing N N 293 THR CB CG2 sing N N 294 THR CB HB sing N N 295 THR OG1 HG1 sing N N 296 THR CG2 HG21 sing N N 297 THR CG2 HG22 sing N N 298 THR CG2 HG23 sing N N 299 THR OXT HXT sing N N 300 TYR N CA sing N N 301 TYR N H sing N N 302 TYR N H2 sing N N 303 TYR CA C sing N N 304 TYR CA CB sing N N 305 TYR CA HA sing N N 306 TYR C O doub N N 307 TYR C OXT sing N N 308 TYR CB CG sing N N 309 TYR CB HB2 sing N N 310 TYR CB HB3 sing N N 311 TYR CG CD1 doub Y N 312 TYR CG CD2 sing Y N 313 TYR CD1 CE1 sing Y N 314 TYR CD1 HD1 sing N N 315 TYR CD2 CE2 doub Y N 316 TYR CD2 HD2 sing N N 317 TYR CE1 CZ doub Y N 318 TYR CE1 HE1 sing N N 319 TYR CE2 CZ sing Y N 320 TYR CE2 HE2 sing N N 321 TYR CZ OH sing N N 322 TYR OH HH sing N N 323 TYR OXT HXT sing N N 324 VAL N CA sing N N 325 VAL N H sing N N 326 VAL N H2 sing N N 327 VAL CA C sing N N 328 VAL CA CB sing N N 329 VAL CA HA sing N N 330 VAL C O doub N N 331 VAL C OXT sing N N 332 VAL CB CG1 sing N N 333 VAL CB CG2 sing N N 334 VAL CB HB sing N N 335 VAL CG1 HG11 sing N N 336 VAL CG1 HG12 sing N N 337 VAL CG1 HG13 sing N N 338 VAL CG2 HG21 sing N N 339 VAL CG2 HG22 sing N N 340 VAL CG2 HG23 sing N N 341 VAL OXT HXT sing N N 342 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 '(4S)-2-METHYL-2,4-PENTANEDIOL' MPD 3 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 4BKH _pdbx_initial_refinement_model.details ? #