HEADER PROTEIN BINDING 22-OCT-14 3X0W TITLE CRYSTAL STRUCTURE OF PLEKHM1 LIR-FUSED HUMAN LC3B_2-119 COMPND MOL_ID: 1; COMPND 2 MOLECULE: MICROTUBULE-ASSOCIATED PROTEINS 1A/1B LIGHT CHAIN 3B; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: UNP RESIDUES 2-119; COMPND 5 SYNONYM: AUTOPHAGY-RELATED PROTEIN LC3 B, AUTOPHAGY-RELATED COMPND 6 UBIQUITIN-LIKE MODIFIER LC3 B, MAP1 LIGHT CHAIN 3-LIKE PROTEIN 2, COMPND 7 MAP1A/MAP1B LIGHT CHAIN 3 B, MAP1A/MAP1B LC3 B, MICROTUBULE- COMPND 8 ASSOCIATED PROTEIN 1 LIGHT CHAIN 3 BETA; COMPND 9 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: MAP1LC3B, MAP1ALC3; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET30 KEYWDS UBIQUITIN-LIKE FOLD, AUTOPHAGY, PLEKHM1, PROTEIN BINDING EXPDTA X-RAY DIFFRACTION AUTHOR H.SUZUKI,D.G.MCEWAN,D.POPOVIC,A.GUBAS,S.TERAWAKI,D.STADEL,F.COXON, AUTHOR 2 D.M.STEGMANN,S.BHOGARAJU,K.MADDI,A.KIRCHHOFF,E.GATTI,M.H.HELFRICH, AUTHOR 3 C.BEHRENDS,P.PIERRE,I.DIKIC,S.WAKATSUKI REVDAT 3 08-NOV-23 3X0W 1 REMARK REVDAT 2 24-AUG-22 3X0W 1 JRNL SEQADV REVDAT 1 14-JAN-15 3X0W 0 JRNL AUTH D.G.MCEWAN,D.POPOVIC,A.GUBAS,S.TERAWAKI,H.SUZUKI,D.STADEL, JRNL AUTH 2 F.P.COXON,D.MIRANDA DE STEGMANN,S.BHOGARAJU,K.MADDI, JRNL AUTH 3 A.KIRCHOF,E.GATTI,M.H.HELFRICH,S.WAKATSUKI,C.BEHRENDS, JRNL AUTH 4 P.PIERRE,I.DIKIC JRNL TITL PLEKHM1 REGULATES AUTOPHAGOSOME-LYSOSOME FUSION THROUGH HOPS JRNL TITL 2 COMPLEX AND LC3/GABARAP PROTEINS. JRNL REF MOL.CELL V. 57 39 2015 JRNL REFN ISSN 1097-2765 JRNL PMID 25498145 JRNL DOI 10.1016/J.MOLCEL.2014.11.006 REMARK 2 REMARK 2 RESOLUTION. 2.71 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.7.0029 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.71 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.80 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 92.7 REMARK 3 NUMBER OF REFLECTIONS : 7343 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.228 REMARK 3 R VALUE (WORKING SET) : 0.224 REMARK 3 FREE R VALUE : 0.294 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.600 REMARK 3 FREE R VALUE TEST SET COUNT : 354 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.71 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.78 REMARK 3 REFLECTION IN BIN (WORKING SET) : 557 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.83 REMARK 3 BIN R VALUE (WORKING SET) : 0.2870 REMARK 3 BIN FREE R VALUE SET COUNT : 28 REMARK 3 BIN FREE R VALUE : 0.3650 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2043 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 25 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 53.81 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 2.00000 REMARK 3 B22 (A**2) : 2.00000 REMARK 3 B33 (A**2) : -4.00000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.441 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.352 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 37.222 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.931 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.893 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2083 ; 0.011 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 2040 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2810 ; 1.429 ; 1.963 REMARK 3 BOND ANGLES OTHERS (DEGREES): 4695 ; 0.808 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 245 ; 6.524 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 105 ;36.903 ;23.905 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 398 ;19.705 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 18 ;16.537 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 313 ; 0.080 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2305 ; 0.006 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 481 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 22 A 145 REMARK 3 ORIGIN FOR THE GROUP (A): 5.1352 22.2141 16.2105 REMARK 3 T TENSOR REMARK 3 T11: 0.0674 T22: 0.0571 REMARK 3 T33: 0.1313 T12: 0.0138 REMARK 3 T13: 0.0335 T23: -0.0083 REMARK 3 L TENSOR REMARK 3 L11: 1.1880 L22: 0.0608 REMARK 3 L33: 0.2283 L12: -0.0161 REMARK 3 L13: -0.2772 L23: 0.0601 REMARK 3 S TENSOR REMARK 3 S11: 0.0736 S12: -0.0090 S13: 0.0399 REMARK 3 S21: 0.0186 S22: -0.0366 S23: -0.0043 REMARK 3 S31: 0.0578 S32: 0.0293 S33: -0.0371 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 23 B 145 REMARK 3 ORIGIN FOR THE GROUP (A): -6.9764 46.8472 13.2553 REMARK 3 T TENSOR REMARK 3 T11: 0.0774 T22: 0.0665 REMARK 3 T33: 0.1256 T12: 0.0489 REMARK 3 T13: -0.0098 T23: -0.0077 REMARK 3 L TENSOR REMARK 3 L11: 1.2305 L22: 0.4714 REMARK 3 L33: 0.4128 L12: 0.1297 REMARK 3 L13: -0.7011 L23: 0.0009 REMARK 3 S TENSOR REMARK 3 S11: 0.0828 S12: 0.1348 S13: 0.0831 REMARK 3 S21: 0.1133 S22: -0.0215 S23: -0.0209 REMARK 3 S31: -0.0252 S32: -0.0770 S33: -0.0613 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3X0W COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 24-OCT-14. REMARK 100 THE DEPOSITION ID IS D_1000097038. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 17-APR-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PHOTON FACTORY REMARK 200 BEAMLINE : BL-5A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 270 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 7759 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.710 REMARK 200 RESOLUTION RANGE LOW (A) : 48.800 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 92.9 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.71 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.86 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.8 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 3VTU REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.48 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.26 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M ACETATE, PH 5.0, 1.4M AMMONIUM REMARK 280 SULFATE, 0.1M NACL, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE REMARK 280 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 59.62200 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 34.50450 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 34.50450 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 89.43300 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 34.50450 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 34.50450 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 29.81100 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 34.50450 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 34.50450 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 89.43300 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 34.50450 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 34.50450 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 29.81100 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 59.62200 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 13 REMARK 465 SER A 14 REMARK 465 VAL A 15 REMARK 465 ARG A 16 REMARK 465 PRO A 17 REMARK 465 GLN A 18 REMARK 465 GLN A 19 REMARK 465 GLU A 20 REMARK 465 ASP A 21 REMARK 465 PHE A 146 REMARK 465 GLY B 13 REMARK 465 SER B 14 REMARK 465 VAL B 15 REMARK 465 ARG B 16 REMARK 465 PRO B 17 REMARK 465 GLN B 18 REMARK 465 GLN B 19 REMARK 465 GLU B 20 REMARK 465 ASP B 21 REMARK 465 GLU B 22 REMARK 465 PHE B 146 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 68 114.03 -161.38 REMARK 500 GLU A 132 -38.77 -31.92 REMARK 500 GLU A 144 30.06 -93.01 REMARK 500 GLU B 31 72.95 -100.81 REMARK 500 TYR B 65 157.04 -44.55 REMARK 500 REMARK 500 REMARK: NULL DBREF 3X0W A 29 146 UNP Q9GZQ8 MLP3B_HUMAN 2 119 DBREF 3X0W B 29 146 UNP Q9GZQ8 MLP3B_HUMAN 2 119 SEQADV 3X0W GLY A 13 UNP Q9GZQ8 EXPRESSION TAG SEQADV 3X0W SER A 14 UNP Q9GZQ8 EXPRESSION TAG SEQADV 3X0W VAL A 15 UNP Q9GZQ8 EXPRESSION TAG SEQADV 3X0W ARG A 16 UNP Q9GZQ8 EXPRESSION TAG SEQADV 3X0W PRO A 17 UNP Q9GZQ8 EXPRESSION TAG SEQADV 3X0W GLN A 18 UNP Q9GZQ8 EXPRESSION TAG SEQADV 3X0W GLN A 19 UNP Q9GZQ8 EXPRESSION TAG SEQADV 3X0W GLU A 20 UNP Q9GZQ8 EXPRESSION TAG SEQADV 3X0W ASP A 21 UNP Q9GZQ8 EXPRESSION TAG SEQADV 3X0W GLU A 22 UNP Q9GZQ8 EXPRESSION TAG SEQADV 3X0W TRP A 23 UNP Q9GZQ8 EXPRESSION TAG SEQADV 3X0W VAL A 24 UNP Q9GZQ8 EXPRESSION TAG SEQADV 3X0W ASN A 25 UNP Q9GZQ8 EXPRESSION TAG SEQADV 3X0W VAL A 26 UNP Q9GZQ8 EXPRESSION TAG SEQADV 3X0W GLY A 27 UNP Q9GZQ8 EXPRESSION TAG SEQADV 3X0W SER A 28 UNP Q9GZQ8 EXPRESSION TAG SEQADV 3X0W GLY B 13 UNP Q9GZQ8 EXPRESSION TAG SEQADV 3X0W SER B 14 UNP Q9GZQ8 EXPRESSION TAG SEQADV 3X0W VAL B 15 UNP Q9GZQ8 EXPRESSION TAG SEQADV 3X0W ARG B 16 UNP Q9GZQ8 EXPRESSION TAG SEQADV 3X0W PRO B 17 UNP Q9GZQ8 EXPRESSION TAG SEQADV 3X0W GLN B 18 UNP Q9GZQ8 EXPRESSION TAG SEQADV 3X0W GLN B 19 UNP Q9GZQ8 EXPRESSION TAG SEQADV 3X0W GLU B 20 UNP Q9GZQ8 EXPRESSION TAG SEQADV 3X0W ASP B 21 UNP Q9GZQ8 EXPRESSION TAG SEQADV 3X0W GLU B 22 UNP Q9GZQ8 EXPRESSION TAG SEQADV 3X0W TRP B 23 UNP Q9GZQ8 EXPRESSION TAG SEQADV 3X0W VAL B 24 UNP Q9GZQ8 EXPRESSION TAG SEQADV 3X0W ASN B 25 UNP Q9GZQ8 EXPRESSION TAG SEQADV 3X0W VAL B 26 UNP Q9GZQ8 EXPRESSION TAG SEQADV 3X0W GLY B 27 UNP Q9GZQ8 EXPRESSION TAG SEQADV 3X0W SER B 28 UNP Q9GZQ8 EXPRESSION TAG SEQRES 1 A 134 GLY SER VAL ARG PRO GLN GLN GLU ASP GLU TRP VAL ASN SEQRES 2 A 134 VAL GLY SER PRO SER GLU LYS THR PHE LYS GLN ARG ARG SEQRES 3 A 134 THR PHE GLU GLN ARG VAL GLU ASP VAL ARG LEU ILE ARG SEQRES 4 A 134 GLU GLN HIS PRO THR LYS ILE PRO VAL ILE ILE GLU ARG SEQRES 5 A 134 TYR LYS GLY GLU LYS GLN LEU PRO VAL LEU ASP LYS THR SEQRES 6 A 134 LYS PHE LEU VAL PRO ASP HIS VAL ASN MET SER GLU LEU SEQRES 7 A 134 ILE LYS ILE ILE ARG ARG ARG LEU GLN LEU ASN ALA ASN SEQRES 8 A 134 GLN ALA PHE PHE LEU LEU VAL ASN GLY HIS SER MET VAL SEQRES 9 A 134 SER VAL SER THR PRO ILE SER GLU VAL TYR GLU SER GLU SEQRES 10 A 134 LYS ASP GLU ASP GLY PHE LEU TYR MET VAL TYR ALA SER SEQRES 11 A 134 GLN GLU THR PHE SEQRES 1 B 134 GLY SER VAL ARG PRO GLN GLN GLU ASP GLU TRP VAL ASN SEQRES 2 B 134 VAL GLY SER PRO SER GLU LYS THR PHE LYS GLN ARG ARG SEQRES 3 B 134 THR PHE GLU GLN ARG VAL GLU ASP VAL ARG LEU ILE ARG SEQRES 4 B 134 GLU GLN HIS PRO THR LYS ILE PRO VAL ILE ILE GLU ARG SEQRES 5 B 134 TYR LYS GLY GLU LYS GLN LEU PRO VAL LEU ASP LYS THR SEQRES 6 B 134 LYS PHE LEU VAL PRO ASP HIS VAL ASN MET SER GLU LEU SEQRES 7 B 134 ILE LYS ILE ILE ARG ARG ARG LEU GLN LEU ASN ALA ASN SEQRES 8 B 134 GLN ALA PHE PHE LEU LEU VAL ASN GLY HIS SER MET VAL SEQRES 9 B 134 SER VAL SER THR PRO ILE SER GLU VAL TYR GLU SER GLU SEQRES 10 B 134 LYS ASP GLU ASP GLY PHE LEU TYR MET VAL TYR ALA SER SEQRES 11 B 134 GLN GLU THR PHE FORMUL 3 HOH *25(H2 O) HELIX 1 1 SER A 28 LYS A 32 5 5 HELIX 2 2 THR A 33 ARG A 38 1 6 HELIX 3 3 THR A 39 HIS A 54 1 16 HELIX 4 4 ASN A 86 GLN A 99 1 14 HELIX 5 5 PRO A 121 LYS A 130 1 10 HELIX 6 6 THR B 33 ARG B 38 1 6 HELIX 7 7 THR B 39 HIS B 54 1 16 HELIX 8 8 ASN B 86 GLN B 99 1 14 HELIX 9 9 PRO B 121 LYS B 130 1 10 SHEET 1 A 4 LYS A 78 PRO A 82 0 SHEET 2 A 4 LYS A 57 ARG A 64 -1 N VAL A 60 O PHE A 79 SHEET 3 A 4 LEU A 136 ALA A 141 1 O MET A 138 N ILE A 61 SHEET 4 A 4 PHE A 107 VAL A 110 -1 N LEU A 109 O VAL A 139 SHEET 1 B 5 LYS B 78 PRO B 82 0 SHEET 2 B 5 LYS B 57 ARG B 64 -1 N VAL B 60 O PHE B 79 SHEET 3 B 5 LEU B 136 ALA B 141 1 O MET B 138 N ILE B 61 SHEET 4 B 5 PHE B 107 VAL B 110 -1 N LEU B 109 O VAL B 139 SHEET 5 B 5 HIS B 113 SER B 114 -1 O HIS B 113 N VAL B 110 CRYST1 69.009 69.009 119.244 90.00 90.00 90.00 P 43 21 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014491 0.000000 0.000000 0.00000 SCALE2 0.000000 0.014491 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008386 0.00000