HEADER HYDROLASE 30-OCT-14 3X17 TITLE CRYSTAL STRUCTURE OF METAGENOME-DERIVED GLYCOSIDE HYDROLASE FAMILY 9 TITLE 2 ENDOGLUCANASE COMPND MOL_ID: 1; COMPND 2 MOLECULE: ENDOGLUCANASE; COMPND 3 CHAIN: B, A; COMPND 4 FRAGMENT: UNP RESIDUES 20-577; COMPND 5 SYNONYM: LC-CELG; COMPND 6 EC: 3.2.1.4; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: UNCULTURED BACTERIUM; SOURCE 3 ORGANISM_TAXID: 77133; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 5 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 6 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 7 EXPRESSION_SYSTEM_PLASMID: PET25B KEYWDS (ALPHA/ALPHA)6 BARREL FOLD, CELLULASE, CARBOHYDRATE/SUGAR BINDING, KEYWDS 2 HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR H.OKANO,C.ANGKAWIDJAJA,S.KANAYA REVDAT 3 08-NOV-23 3X17 1 REMARK REVDAT 2 24-AUG-22 3X17 1 JRNL REMARK SEQADV LINK REVDAT 1 21-JAN-15 3X17 0 JRNL AUTH H.OKANO,E.KANAYA,M.OZAKI,C.ANGKAWIDJAJA,S.KANAYA JRNL TITL STRUCTURE, ACTIVITY, AND STABILITY OF METAGENOME-DERIVED JRNL TITL 2 GLYCOSIDE HYDROLASE FAMILY 9 ENDOGLUCANASE WITH AN JRNL TITL 3 N-TERMINAL IG-LIKE DOMAIN. JRNL REF PROTEIN SCI. V. 24 408 2015 JRNL REFN ESSN 1469-896X JRNL PMID 25545469 JRNL DOI 10.1002/PRO.2632 REMARK 2 REMARK 2 RESOLUTION. 2.15 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0109 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.15 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 43.96 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 60076 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.190 REMARK 3 R VALUE (WORKING SET) : 0.187 REMARK 3 FREE R VALUE : 0.246 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 3208 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.15 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.21 REMARK 3 REFLECTION IN BIN (WORKING SET) : 4300 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 97.69 REMARK 3 BIN R VALUE (WORKING SET) : 0.2310 REMARK 3 BIN FREE R VALUE SET COUNT : 230 REMARK 3 BIN FREE R VALUE : 0.2860 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 8478 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 6 REMARK 3 SOLVENT ATOMS : 397 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 43.64 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.71000 REMARK 3 B22 (A**2) : -0.85000 REMARK 3 B33 (A**2) : 1.56000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.247 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.207 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.145 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 5.548 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.960 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.929 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 8730 ; 0.011 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 11936 ; 1.190 ; 1.948 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 1094 ; 8.362 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 408 ;32.922 ;22.696 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1230 ;18.051 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 74 ;21.506 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1262 ; 0.104 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 6954 ; 0.016 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 5456 ; 1.446 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 8710 ; 2.325 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 3274 ; 3.850 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 3226 ; 5.614 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3X17 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 13-NOV-14. REMARK 100 THE DEPOSITION ID IS D_1000097049. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 13-DEC-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SPRING-8 REMARK 200 BEAMLINE : BL44XU REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9 REMARK 200 MONOCHROMATOR : ROTATED-INCLINED DOUBLE CRYSTAL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX225HE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 63355 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.150 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 5.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 14.90 REMARK 200 R MERGE (I) : 0.13300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 28.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 1CLC REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.72 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.35 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M TRIS-HCL, 0.2M MAGNESIUM CHLORIDE REMARK 280 HEXAHYDRATE, 30% W/V POLYETHYLENE GLYCOL 4000, PH 8.5, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 42.31550 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 75.57850 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 44.95650 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 75.57850 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 42.31550 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 44.95650 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET B 19 REMARK 465 LEU B 20 REMARK 465 ALA B 21 REMARK 465 GLY B 22 REMARK 465 SER B 23 REMARK 465 VAL B 24 REMARK 465 GLN B 25 REMARK 465 THR B 26 REMARK 465 ARG B 27 REMARK 465 HIS B 28 REMARK 465 ASP B 29 REMARK 465 MET A 19 REMARK 465 LEU A 20 REMARK 465 ALA A 21 REMARK 465 GLY A 22 REMARK 465 SER A 23 REMARK 465 VAL A 24 REMARK 465 GLN A 25 REMARK 465 THR A 26 REMARK 465 ARG A 27 REMARK 465 HIS A 28 REMARK 465 ASP A 29 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA B 56 121.46 -33.18 REMARK 500 THR B 59 -154.71 -157.49 REMARK 500 ALA B 60 108.90 -58.13 REMARK 500 ALA B 61 -114.60 61.80 REMARK 500 VAL B 96 -77.58 -137.35 REMARK 500 PHE B 106 36.41 -94.14 REMARK 500 ALA B 195 -126.77 -163.81 REMARK 500 TYR B 349 56.96 36.29 REMARK 500 ARG B 473 99.21 -162.57 REMARK 500 HIS B 510 84.42 -67.56 REMARK 500 THR B 556 -33.50 -137.06 REMARK 500 ALA A 60 -163.34 -75.46 REMARK 500 ALA A 61 32.44 -96.66 REMARK 500 ILE A 63 99.01 -61.31 REMARK 500 VAL A 96 -84.90 -123.11 REMARK 500 ALA A 195 -128.64 -164.23 REMARK 500 LEU A 336 46.93 -142.32 REMARK 500 TYR A 349 60.30 39.65 REMARK 500 GLN A 410 -73.58 -86.09 REMARK 500 ARG A 417 -7.51 -58.94 REMARK 500 ARG A 473 91.08 -162.03 REMARK 500 THR A 556 -27.67 -145.68 REMARK 500 SER A 576 -62.02 -107.91 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 601 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 150 SG REMARK 620 2 ASP B 166 OD2 114.2 REMARK 620 3 HIS B 167 ND1 112.0 110.9 REMARK 620 4 HIS B 193 NE2 105.4 94.3 119.0 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 602 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 225 OD1 REMARK 620 2 GLU B 232 O 99.7 REMARK 620 3 ASN B 235 OD1 91.5 74.4 REMARK 620 4 VAL B 237 O 86.3 162.0 88.6 REMARK 620 5 ASP B 239 OD1 87.4 100.2 174.2 97.0 REMARK 620 6 ASP B 242 OD2 172.6 87.5 89.2 86.4 92.6 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 603 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 351 OD2 REMARK 620 2 ASP B 351 OD1 51.3 REMARK 620 3 ASP B 353 O 103.6 78.6 REMARK 620 4 ASP B 356 OD1 146.4 162.3 94.1 REMARK 620 5 ASP B 357 OD2 81.2 122.1 84.1 72.4 REMARK 620 6 VAL B 395 O 81.4 90.1 159.9 91.8 116.0 REMARK 620 7 HOH B 785 O 131.0 84.2 83.0 78.8 147.4 79.3 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 601 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 150 SG REMARK 620 2 ASP A 166 OD2 125.3 REMARK 620 3 HIS A 167 ND1 114.4 107.1 REMARK 620 4 HIS A 193 NE2 102.4 88.5 116.8 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 602 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 225 OD1 REMARK 620 2 GLU A 232 O 102.3 REMARK 620 3 ASN A 235 OD1 98.0 73.5 REMARK 620 4 VAL A 237 O 78.4 161.0 87.6 REMARK 620 5 ASP A 239 OD1 75.5 110.8 172.7 87.9 REMARK 620 6 ASP A 242 OD2 169.6 67.5 81.1 111.8 105.9 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 603 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 351 OD2 REMARK 620 2 ASP A 351 OD1 55.8 REMARK 620 3 ASP A 353 O 100.7 78.8 REMARK 620 4 ASP A 356 OD1 143.6 159.5 98.6 REMARK 620 5 ASP A 357 OD2 77.8 127.2 87.5 72.5 REMARK 620 6 VAL A 395 O 85.6 92.6 163.5 84.5 108.8 REMARK 620 7 HOH A 846 O 140.4 87.5 84.4 72.0 141.9 81.2 REMARK 620 N 1 2 3 4 5 6 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA B 602 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA B 603 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 602 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 603 DBREF 3X17 B 20 577 UNP W8PF21 W8PF21_9BACT 20 577 DBREF 3X17 A 20 577 UNP W8PF21 W8PF21_9BACT 20 577 SEQADV 3X17 MET B 19 UNP W8PF21 EXPRESSION TAG SEQADV 3X17 MET A 19 UNP W8PF21 EXPRESSION TAG SEQRES 1 B 559 MET LEU ALA GLY SER VAL GLN THR ARG HIS ASP LEU LEU SEQRES 2 B 559 GLN GLY ALA GLN ILE LEU VAL ASN GLN VAL GLY TYR HIS SEQRES 3 B 559 PRO ALA THR PRO LYS GLN ALA VAL LEU ALA LEU ALA PRO SEQRES 4 B 559 GLY THR ALA ALA GLY ILE ARG PRO GLY TRP THR PRO THR SEQRES 5 B 559 LEU GLN ILE VAL ARG ALA ASP ASP GLY GLN VAL VAL TRP SEQRES 6 B 559 GLU GLY THR MET ALA GLY PRO SER GLU ASP ARG LEU VAL SEQRES 7 B 559 SER GLY ASP THR LEU TYR ARG ALA ASP PHE THR SER LEU SEQRES 8 B 559 THR ALA PRO GLY ARG TYR VAL ALA GLN VAL VAL GLY GLY SEQRES 9 B 559 PRO ARG SER PRO GLU PHE ALA ILE GLY PRO VAL TYR ARG SEQRES 10 B 559 ASP VAL LEU TYR ALA ALA ALA ARG SER TYR TYR LEU GLN SEQRES 11 B 559 ARG CYS GLY VAL ALA ILE ASP ASP PRO ILE THR GLY VAL SEQRES 12 B 559 SER HIS ALA LEU ASP HIS HIS GLU ASP GLY TYR VAL LEU SEQRES 13 B 559 VAL ASP ASP PRO PHE TYR ARG ALA GLY THR ARG LEU GLU SEQRES 14 B 559 ALA THR GLY GLY TRP HIS ASP ALA GLY ASP TYR GLY LYS SEQRES 15 B 559 TYR VAL THR THR THR ALA VAL THR ALA ALA GLN LEU LEU SEQRES 16 B 559 LYS ALA TYR GLU LEU TYR PRO GLN ALA PHE ALA ASP GLY SEQRES 17 B 559 GLN LEU HIS LEU PRO GLU SER GLY ASN GLY VAL PRO ASP SEQRES 18 B 559 ILE LEU ASP GLU VAL ARG TRP GLY LEU GLU TRP LEU PHE SEQRES 19 B 559 ARG MET GLN ARG PRO ASP GLY ALA VAL TYR HIS LYS LEU SEQRES 20 B 559 ALA GLY LEU ARG TRP PRO GLY MET ILE ARG PRO GLU GLN SEQRES 21 B 559 ASP VAL GLN ARG ARG TYR VAL TYR ARG ILE THR THR GLN SEQRES 22 B 559 ASP THR ALA LYS ALA ALA ALA ALA TRP ALA MET ALA ALA SEQRES 23 B 559 ARG ILE PHE ALA PRO PHE ASP ALA ALA PHE ALA ARG LYS SEQRES 24 B 559 ALA LEU ALA ALA ALA GLU GLN ALA TRP ARG PHE LEU ALA SEQRES 25 B 559 ALA SER GLY PRO ILE LEU ASP TYR PRO ALA GLU ASP ASN SEQRES 26 B 559 SER GLY SER GLY PRO TYR ASP ASP ARG ASP ASP ALA ASP SEQRES 27 B 559 ASP ARG PHE TRP ALA ALA VAL GLU LEU TRP VAL VAL THR SEQRES 28 B 559 GLY ARG ALA GLU TYR HIS ASP TYR ILE ALA ARG MET ALA SEQRES 29 B 559 ARG THR GLY LEU PRO ALA TYR ALA PRO VAL SER TRP VAL SEQRES 30 B 559 ASN PRO ALA ALA LEU GLY TYR PHE ASP TYR VAL THR LEU SEQRES 31 B 559 GLY GLN LYS GLY ASP PRO ALA ILE ARG ALA ARG LEU VAL SEQRES 32 B 559 GLN ARG ILE LEU GLU GLY ALA ARG SER VAL PHE GLN THR SEQRES 33 B 559 TYR GLU GLN SER GLY TYR GLY VAL PRO ILE LEU ALA GLY SEQRES 34 B 559 SER PHE HIS TRP GLY SER ASN LYS GLU ALA LEU ALA LYS SEQRES 35 B 559 GLY MET LEU LEU LEU PHE ALA HIS HIS LEU GLU PRO ARG SEQRES 36 B 559 PRO GLU TYR GLU ARG ALA ALA LEU ALA GLN LEU ASP TYR SEQRES 37 B 559 VAL LEU GLY VAL ASN PRO LEU ALA LYS SER TYR VAL THR SEQRES 38 B 559 GLY LEU GLY SER ASN PRO PRO ARG ASN PRO HIS HIS ARG SEQRES 39 B 559 LEU VAL LYS ALA SER GLY VAL MET VAL PRO GLY LEU LEU SEQRES 40 B 559 VAL GLY GLY PRO ASN ASP HIS PRO GLN THR LYS ALA ILE SEQRES 41 B 559 ARG PRO HIS MET GLY PRO ARG GLY TYR ALA ASP VAL THR SEQRES 42 B 559 ASP SER TYR GLU THR ASN GLU PRO ALA ILE ASP TYR ASN SEQRES 43 B 559 ALA PRO LEU VAL PHE VAL ALA ALA HIS PHE ALA SER LEU SEQRES 1 A 559 MET LEU ALA GLY SER VAL GLN THR ARG HIS ASP LEU LEU SEQRES 2 A 559 GLN GLY ALA GLN ILE LEU VAL ASN GLN VAL GLY TYR HIS SEQRES 3 A 559 PRO ALA THR PRO LYS GLN ALA VAL LEU ALA LEU ALA PRO SEQRES 4 A 559 GLY THR ALA ALA GLY ILE ARG PRO GLY TRP THR PRO THR SEQRES 5 A 559 LEU GLN ILE VAL ARG ALA ASP ASP GLY GLN VAL VAL TRP SEQRES 6 A 559 GLU GLY THR MET ALA GLY PRO SER GLU ASP ARG LEU VAL SEQRES 7 A 559 SER GLY ASP THR LEU TYR ARG ALA ASP PHE THR SER LEU SEQRES 8 A 559 THR ALA PRO GLY ARG TYR VAL ALA GLN VAL VAL GLY GLY SEQRES 9 A 559 PRO ARG SER PRO GLU PHE ALA ILE GLY PRO VAL TYR ARG SEQRES 10 A 559 ASP VAL LEU TYR ALA ALA ALA ARG SER TYR TYR LEU GLN SEQRES 11 A 559 ARG CYS GLY VAL ALA ILE ASP ASP PRO ILE THR GLY VAL SEQRES 12 A 559 SER HIS ALA LEU ASP HIS HIS GLU ASP GLY TYR VAL LEU SEQRES 13 A 559 VAL ASP ASP PRO PHE TYR ARG ALA GLY THR ARG LEU GLU SEQRES 14 A 559 ALA THR GLY GLY TRP HIS ASP ALA GLY ASP TYR GLY LYS SEQRES 15 A 559 TYR VAL THR THR THR ALA VAL THR ALA ALA GLN LEU LEU SEQRES 16 A 559 LYS ALA TYR GLU LEU TYR PRO GLN ALA PHE ALA ASP GLY SEQRES 17 A 559 GLN LEU HIS LEU PRO GLU SER GLY ASN GLY VAL PRO ASP SEQRES 18 A 559 ILE LEU ASP GLU VAL ARG TRP GLY LEU GLU TRP LEU PHE SEQRES 19 A 559 ARG MET GLN ARG PRO ASP GLY ALA VAL TYR HIS LYS LEU SEQRES 20 A 559 ALA GLY LEU ARG TRP PRO GLY MET ILE ARG PRO GLU GLN SEQRES 21 A 559 ASP VAL GLN ARG ARG TYR VAL TYR ARG ILE THR THR GLN SEQRES 22 A 559 ASP THR ALA LYS ALA ALA ALA ALA TRP ALA MET ALA ALA SEQRES 23 A 559 ARG ILE PHE ALA PRO PHE ASP ALA ALA PHE ALA ARG LYS SEQRES 24 A 559 ALA LEU ALA ALA ALA GLU GLN ALA TRP ARG PHE LEU ALA SEQRES 25 A 559 ALA SER GLY PRO ILE LEU ASP TYR PRO ALA GLU ASP ASN SEQRES 26 A 559 SER GLY SER GLY PRO TYR ASP ASP ARG ASP ASP ALA ASP SEQRES 27 A 559 ASP ARG PHE TRP ALA ALA VAL GLU LEU TRP VAL VAL THR SEQRES 28 A 559 GLY ARG ALA GLU TYR HIS ASP TYR ILE ALA ARG MET ALA SEQRES 29 A 559 ARG THR GLY LEU PRO ALA TYR ALA PRO VAL SER TRP VAL SEQRES 30 A 559 ASN PRO ALA ALA LEU GLY TYR PHE ASP TYR VAL THR LEU SEQRES 31 A 559 GLY GLN LYS GLY ASP PRO ALA ILE ARG ALA ARG LEU VAL SEQRES 32 A 559 GLN ARG ILE LEU GLU GLY ALA ARG SER VAL PHE GLN THR SEQRES 33 A 559 TYR GLU GLN SER GLY TYR GLY VAL PRO ILE LEU ALA GLY SEQRES 34 A 559 SER PHE HIS TRP GLY SER ASN LYS GLU ALA LEU ALA LYS SEQRES 35 A 559 GLY MET LEU LEU LEU PHE ALA HIS HIS LEU GLU PRO ARG SEQRES 36 A 559 PRO GLU TYR GLU ARG ALA ALA LEU ALA GLN LEU ASP TYR SEQRES 37 A 559 VAL LEU GLY VAL ASN PRO LEU ALA LYS SER TYR VAL THR SEQRES 38 A 559 GLY LEU GLY SER ASN PRO PRO ARG ASN PRO HIS HIS ARG SEQRES 39 A 559 LEU VAL LYS ALA SER GLY VAL MET VAL PRO GLY LEU LEU SEQRES 40 A 559 VAL GLY GLY PRO ASN ASP HIS PRO GLN THR LYS ALA ILE SEQRES 41 A 559 ARG PRO HIS MET GLY PRO ARG GLY TYR ALA ASP VAL THR SEQRES 42 A 559 ASP SER TYR GLU THR ASN GLU PRO ALA ILE ASP TYR ASN SEQRES 43 A 559 ALA PRO LEU VAL PHE VAL ALA ALA HIS PHE ALA SER LEU HET ZN B 601 1 HET CA B 602 1 HET CA B 603 1 HET ZN A 601 1 HET CA A 602 1 HET CA A 603 1 HETNAM ZN ZINC ION HETNAM CA CALCIUM ION FORMUL 3 ZN 2(ZN 2+) FORMUL 4 CA 4(CA 2+) FORMUL 9 HOH *397(H2 O) HELIX 1 1 PRO B 132 ARG B 149 1 18 HELIX 2 2 VAL B 202 TYR B 219 1 18 HELIX 3 3 PRO B 220 PHE B 223 5 4 HELIX 4 4 PRO B 238 MET B 254 1 17 HELIX 5 5 ARG B 275 ASP B 279 5 5 HELIX 6 6 THR B 290 PHE B 307 1 18 HELIX 7 7 ASP B 311 ALA B 331 1 21 HELIX 8 8 PRO B 339 SER B 344 5 6 HELIX 9 9 ASP B 354 GLY B 370 1 17 HELIX 10 10 ARG B 371 GLY B 385 1 15 HELIX 11 11 ALA B 398 GLY B 409 1 12 HELIX 12 12 ASP B 413 GLN B 437 1 25 HELIX 13 13 GLY B 452 GLU B 471 1 20 HELIX 14 14 ARG B 473 LEU B 488 1 16 HELIX 15 15 HIS B 511 GLY B 518 1 8 HELIX 16 16 MET B 542 GLY B 546 5 5 HELIX 17 17 ALA B 560 LEU B 577 1 18 HELIX 18 18 PRO A 132 GLN A 148 1 17 HELIX 19 19 VAL A 202 TYR A 219 1 18 HELIX 20 20 PRO A 220 PHE A 223 5 4 HELIX 21 21 PRO A 238 MET A 254 1 17 HELIX 22 22 ARG A 275 ASP A 279 5 5 HELIX 23 23 THR A 290 ALA A 308 1 19 HELIX 24 24 ASP A 311 SER A 332 1 22 HELIX 25 25 PRO A 339 SER A 344 5 6 HELIX 26 26 ASP A 354 GLY A 370 1 17 HELIX 27 27 ARG A 371 GLY A 385 1 15 HELIX 28 28 PRO A 397 GLY A 409 1 13 HELIX 29 29 ALA A 418 GLN A 437 1 20 HELIX 30 30 GLY A 452 GLU A 471 1 20 HELIX 31 31 ARG A 473 LEU A 488 1 16 HELIX 32 32 HIS A 511 GLY A 518 1 8 HELIX 33 33 MET A 542 GLY A 546 5 5 HELIX 34 34 SER A 553 GLU A 558 1 6 HELIX 35 35 ALA A 560 LEU A 577 1 18 SHEET 1 A 4 GLN B 35 LEU B 37 0 SHEET 2 A 4 GLN B 50 LEU B 55 -1 O VAL B 52 N LEU B 37 SHEET 3 A 4 THR B 100 ASP B 105 -1 O TYR B 102 N LEU B 53 SHEET 4 A 4 ALA B 88 GLU B 92 -1 N SER B 91 O LEU B 101 SHEET 1 B 5 GLY B 42 TYR B 43 0 SHEET 2 B 5 PHE B 128 ILE B 130 1 O ALA B 129 N TYR B 43 SHEET 3 B 5 GLY B 113 VAL B 119 -1 N TYR B 115 O PHE B 128 SHEET 4 B 5 THR B 70 ARG B 75 -1 N GLN B 72 O GLN B 118 SHEET 5 B 5 VAL B 81 THR B 86 -1 O GLY B 85 N LEU B 71 SHEET 1 C 2 ILE B 154 ASP B 155 0 SHEET 2 C 2 SER B 162 HIS B 163 -1 O HIS B 163 N ILE B 154 SHEET 1 D 4 TYR B 172 VAL B 173 0 SHEET 2 D 4 ARG B 283 VAL B 285 1 O ARG B 283 N TYR B 172 SHEET 3 D 4 LYS B 264 GLY B 267 -1 N ALA B 266 O TYR B 284 SHEET 4 D 4 LYS B 200 TYR B 201 -1 N LYS B 200 O LEU B 265 SHEET 1 E 2 VAL B 261 TYR B 262 0 SHEET 2 E 2 ILE B 288 THR B 289 -1 O THR B 289 N VAL B 261 SHEET 1 F 4 GLN A 35 LEU A 37 0 SHEET 2 F 4 GLN A 50 ALA A 54 -1 O VAL A 52 N LEU A 37 SHEET 3 F 4 THR A 100 ASP A 105 -1 O TYR A 102 N LEU A 53 SHEET 4 F 4 ALA A 88 GLU A 92 -1 N ALA A 88 O ARG A 103 SHEET 1 G 5 GLY A 42 TYR A 43 0 SHEET 2 G 5 PHE A 128 ILE A 130 1 O ALA A 129 N TYR A 43 SHEET 3 G 5 GLY A 113 VAL A 119 -1 N TYR A 115 O PHE A 128 SHEET 4 G 5 THR A 70 ARG A 75 -1 N GLN A 72 O GLN A 118 SHEET 5 G 5 VAL A 81 THR A 86 -1 O VAL A 82 N ILE A 73 SHEET 1 H 2 ILE A 154 ASP A 155 0 SHEET 2 H 2 SER A 162 HIS A 163 -1 O HIS A 163 N ILE A 154 SHEET 1 I 4 TYR A 172 VAL A 173 0 SHEET 2 I 4 ARG A 283 VAL A 285 1 O ARG A 283 N TYR A 172 SHEET 3 I 4 LYS A 264 GLY A 267 -1 N ALA A 266 O TYR A 284 SHEET 4 I 4 LYS A 200 TYR A 201 -1 N LYS A 200 O LEU A 265 SHEET 1 J 2 VAL A 261 TYR A 262 0 SHEET 2 J 2 ILE A 288 THR A 289 -1 O THR A 289 N VAL A 261 LINK SG CYS B 150 ZN ZN B 601 1555 1555 2.16 LINK OD2 ASP B 166 ZN ZN B 601 1555 1555 1.92 LINK ND1 HIS B 167 ZN ZN B 601 1555 1555 2.10 LINK NE2 HIS B 193 ZN ZN B 601 1555 1555 2.06 LINK OD1 ASP B 225 CA CA B 602 1555 1555 2.50 LINK O GLU B 232 CA CA B 602 1555 1555 2.73 LINK OD1 ASN B 235 CA CA B 602 1555 1555 2.45 LINK O VAL B 237 CA CA B 602 1555 1555 2.32 LINK OD1 ASP B 239 CA CA B 602 1555 1555 2.55 LINK OD2 ASP B 242 CA CA B 602 1555 1555 2.45 LINK OD2 ASP B 351 CA CA B 603 1555 1555 2.49 LINK OD1 ASP B 351 CA CA B 603 1555 1555 2.57 LINK O ASP B 353 CA CA B 603 1555 1555 2.25 LINK OD1 ASP B 356 CA CA B 603 1555 1555 2.42 LINK OD2 ASP B 357 CA CA B 603 1555 1555 2.25 LINK O VAL B 395 CA CA B 603 1555 1555 2.41 LINK CA CA B 603 O HOH B 785 1555 1555 2.49 LINK SG CYS A 150 ZN ZN A 601 1555 1555 2.15 LINK OD2 ASP A 166 ZN ZN A 601 1555 1555 2.00 LINK ND1 HIS A 167 ZN ZN A 601 1555 1555 1.93 LINK NE2 HIS A 193 ZN ZN A 601 1555 1555 2.13 LINK OD1 ASP A 225 CA CA A 602 1555 1555 2.35 LINK O GLU A 232 CA CA A 602 1555 1555 2.69 LINK OD1 ASN A 235 CA CA A 602 1555 1555 2.60 LINK O VAL A 237 CA CA A 602 1555 1555 2.19 LINK OD1 ASP A 239 CA CA A 602 1555 1555 2.70 LINK OD2 ASP A 242 CA CA A 602 1555 1555 2.56 LINK OD2 ASP A 351 CA CA A 603 1555 1555 2.33 LINK OD1 ASP A 351 CA CA A 603 1555 1555 2.36 LINK O ASP A 353 CA CA A 603 1555 1555 2.30 LINK OD1 ASP A 356 CA CA A 603 1555 1555 2.66 LINK OD2 ASP A 357 CA CA A 603 1555 1555 2.25 LINK O VAL A 395 CA CA A 603 1555 1555 2.45 LINK CA CA A 603 O HOH A 846 1555 1555 2.50 CISPEP 1 GLN B 32 GLY B 33 0 -27.93 CISPEP 2 ALA B 60 ALA B 61 0 6.03 CISPEP 3 GLY B 89 PRO B 90 0 8.91 CISPEP 4 ASP B 170 GLY B 171 0 -18.54 CISPEP 5 THR A 59 ALA A 60 0 -13.95 CISPEP 6 ALA A 60 ALA A 61 0 23.52 CISPEP 7 GLY A 89 PRO A 90 0 3.72 CISPEP 8 ASP A 170 GLY A 171 0 -16.84 SITE 1 AC1 4 CYS B 150 ASP B 166 HIS B 167 HIS B 193 SITE 1 AC2 6 ASP B 225 GLU B 232 ASN B 235 VAL B 237 SITE 2 AC2 6 ASP B 239 ASP B 242 SITE 1 AC3 6 ASP B 351 ASP B 353 ASP B 356 ASP B 357 SITE 2 AC3 6 VAL B 395 HOH B 785 SITE 1 AC4 4 CYS A 150 ASP A 166 HIS A 167 HIS A 193 SITE 1 AC5 6 ASP A 225 GLU A 232 ASN A 235 VAL A 237 SITE 2 AC5 6 ASP A 239 ASP A 242 SITE 1 AC6 6 ASP A 351 ASP A 353 ASP A 356 ASP A 357 SITE 2 AC6 6 VAL A 395 HOH A 846 CRYST1 84.631 89.913 151.157 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011816 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011122 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006616 0.00000