HEADER HYDROLASE 14-NOV-14 3X1D TITLE CRYSTAL STRUCTURE OF ATLASTIN FROM DROSOPHILA MELANOGASTER COMPND MOL_ID: 1; COMPND 2 MOLECULE: ATLASTIN; COMPND 3 CHAIN: A; COMPND 4 EC: 3.6.5.-; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: DROSOPHILA MELANOGASTER; SOURCE 3 ORGANISM_COMMON: FRUIT FLY; SOURCE 4 ORGANISM_TAXID: 7227; SOURCE 5 GENE: ATL, CG6668; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS DOUBLE HELIX, ROSSMANN FOLD, HYDROLASE, GTP BINDING, PHOSPHORYLATION EXPDTA X-RAY DIFFRACTION AUTHOR X.LIU REVDAT 5 03-APR-24 3X1D 1 REMARK REVDAT 4 20-MAR-24 3X1D 1 REMARK REVDAT 3 08-AUG-18 3X1D 1 REMARK REVDAT 2 31-JAN-18 3X1D 1 REMARK REVDAT 1 28-OCT-15 3X1D 0 JRNL AUTH F.WU,X.HU,X.BIAN,X.LIU,J.HU JRNL TITL COMPARISON OF HUMAN AND DROSOPHILA ATLASTIN GTPASES JRNL REF PROTEIN CELL V. 6 139 2015 JRNL REFN ISSN 1674-800X JRNL PMID 25407413 JRNL DOI 10.1007/S13238-014-0118-0 REMARK 2 REMARK 2 RESOLUTION. 2.87 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.8.2_1309) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.87 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 27.79 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.330 REMARK 3 COMPLETENESS FOR RANGE (%) : 92.0 REMARK 3 NUMBER OF REFLECTIONS : 10185 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.278 REMARK 3 R VALUE (WORKING SET) : 0.273 REMARK 3 FREE R VALUE : 0.379 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.850 REMARK 3 FREE R VALUE TEST SET COUNT : 494 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 27.7946 - 4.5480 0.96 2584 130 0.2613 0.3364 REMARK 3 2 4.5480 - 3.6124 0.84 2221 111 0.2612 0.3939 REMARK 3 3 3.6124 - 3.1565 0.98 2558 133 0.2973 0.4063 REMARK 3 4 3.1565 - 2.8700 0.90 2328 120 0.3174 0.4613 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.610 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 45.750 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.009 3073 REMARK 3 ANGLE : 1.639 4161 REMARK 3 CHIRALITY : 0.105 463 REMARK 3 PLANARITY : 0.008 533 REMARK 3 DIHEDRAL : 20.915 1118 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3X1D COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 17-NOV-14. REMARK 100 THE DEPOSITION ID IS D_1000097055. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 27-NOV-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.4 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL17U REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.54 REMARK 200 MONOCHROMATOR : GRAPHITE REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MAR CCD 165 MM REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 10190 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.870 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 3.800 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 35.0 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.87 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 50.00 REMARK 200 COMPLETENESS FOR SHELL (%) : 35.0 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASES REMARK 200 STARTING MODEL: ATLASTIN OF HUMAN REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 37.90 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.98 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20% PEG4000, 0.1M POTASSIUM PHOSPHATE, REMARK 280 0.2M MAGNESIUM CHLORIDE, 0.1M CACODYLATE, PH 7.4, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 35.80850 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 31.95350 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 35.80850 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 31.95350 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 GLY A 2 REMARK 465 ASP A 73 REMARK 465 TRP A 74 REMARK 465 LEU A 75 REMARK 465 GLY A 76 REMARK 465 GLY A 77 REMARK 465 GLU A 78 REMARK 465 SER A 79 REMARK 465 ASP A 80 REMARK 465 PRO A 81 REMARK 465 LEU A 82 REMARK 465 GLU A 83 REMARK 465 GLY A 84 REMARK 465 PHE A 85 REMARK 465 SER A 86 REMARK 465 TRP A 87 REMARK 465 ARG A 88 REMARK 465 GLY A 89 REMARK 465 GLY A 90 REMARK 465 SER A 91 REMARK 465 SER A 128 REMARK 465 GLN A 129 REMARK 465 SER A 130 REMARK 465 THR A 131 REMARK 465 VAL A 132 REMARK 465 ARG A 133 REMARK 465 ASP A 134 REMARK 465 HIS A 410 REMARK 465 ASN A 411 REMARK 465 GLU A 412 REMARK 465 SER A 413 REMARK 465 LYS A 414 REMARK 465 ASN A 415 REMARK 465 ILE A 416 REMARK 465 PHE A 417 REMARK 465 LYS A 418 REMARK 465 ALA A 419 REMARK 465 ALA A 420 REMARK 465 ARG A 421 REMARK 465 THR A 422 REMARK 465 PRO A 423 REMARK 465 ALA A 424 REMARK 465 VAL A 425 REMARK 465 TYR A 426 REMARK 465 PHE A 427 REMARK 465 ALA A 428 REMARK 465 CYS A 429 REMARK 465 ALA A 430 REMARK 465 VAL A 431 REMARK 465 ILE A 432 REMARK 465 MET A 433 REMARK 465 TYR A 434 REMARK 465 ILE A 435 REMARK 465 LEU A 436 REMARK 465 SER A 437 REMARK 465 GLY A 438 REMARK 465 ILE A 439 REMARK 465 PHE A 440 REMARK 465 GLY A 441 REMARK 465 LEU A 442 REMARK 465 VAL A 443 REMARK 465 GLY A 444 REMARK 465 LEU A 445 REMARK 465 TYR A 446 REMARK 465 THR A 447 REMARK 465 PHE A 448 REMARK 465 ALA A 449 REMARK 465 ASN A 450 REMARK 465 PHE A 451 REMARK 465 CYS A 452 REMARK 465 ASN A 453 REMARK 465 LEU A 454 REMARK 465 VAL A 455 REMARK 465 MET A 456 REMARK 465 GLY A 457 REMARK 465 VAL A 458 REMARK 465 ALA A 459 REMARK 465 LEU A 460 REMARK 465 LEU A 461 REMARK 465 THR A 462 REMARK 465 LEU A 463 REMARK 465 ALA A 464 REMARK 465 LEU A 465 REMARK 465 TRP A 466 REMARK 465 ALA A 467 REMARK 465 TYR A 468 REMARK 465 ILE A 469 REMARK 465 ARG A 470 REMARK 465 TYR A 471 REMARK 465 SER A 472 REMARK 465 GLY A 473 REMARK 465 GLU A 474 REMARK 465 LEU A 475 REMARK 465 SER A 476 REMARK 465 ASP A 477 REMARK 465 PHE A 478 REMARK 465 GLY A 479 REMARK 465 GLY A 480 REMARK 465 LYS A 481 REMARK 465 LEU A 482 REMARK 465 ASP A 483 REMARK 465 ASP A 484 REMARK 465 PHE A 485 REMARK 465 ALA A 486 REMARK 465 THR A 487 REMARK 465 LEU A 488 REMARK 465 LEU A 489 REMARK 465 TRP A 490 REMARK 465 GLU A 491 REMARK 465 LYS A 492 REMARK 465 PHE A 493 REMARK 465 MET A 494 REMARK 465 ARG A 495 REMARK 465 PRO A 496 REMARK 465 ILE A 497 REMARK 465 TYR A 498 REMARK 465 HIS A 499 REMARK 465 GLY A 500 REMARK 465 CYS A 501 REMARK 465 MET A 502 REMARK 465 GLU A 503 REMARK 465 LYS A 504 REMARK 465 GLY A 505 REMARK 465 ILE A 506 REMARK 465 HIS A 507 REMARK 465 HIS A 508 REMARK 465 VAL A 509 REMARK 465 ALA A 510 REMARK 465 THR A 511 REMARK 465 HIS A 512 REMARK 465 ALA A 513 REMARK 465 THR A 514 REMARK 465 GLU A 515 REMARK 465 MET A 516 REMARK 465 ALA A 517 REMARK 465 VAL A 518 REMARK 465 GLY A 519 REMARK 465 GLY A 520 REMARK 465 GLY A 521 REMARK 465 ALA A 522 REMARK 465 ALA A 523 REMARK 465 SER A 524 REMARK 465 TYR A 525 REMARK 465 ARG A 526 REMARK 465 SER A 527 REMARK 465 GLN A 528 REMARK 465 THR A 529 REMARK 465 SER A 530 REMARK 465 VAL A 531 REMARK 465 ASN A 532 REMARK 465 ALA A 533 REMARK 465 SER A 534 REMARK 465 ASN A 535 REMARK 465 GLY A 536 REMARK 465 LYS A 537 REMARK 465 VAL A 538 REMARK 465 LYS A 539 REMARK 465 ARG A 540 REMARK 465 SER A 541 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLN A 7 CG CD OE1 NE2 REMARK 470 GLU A 14 CG CD OE1 OE2 REMARK 470 ARG A 30 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 32 CG CD OE1 OE2 REMARK 470 LYS A 34 CG CD CE NZ REMARK 470 ASP A 35 CG OD1 OD2 REMARK 470 PHE A 37 CG CD1 CD2 CE1 CE2 CZ REMARK 470 LYS A 65 CG CD CE NZ REMARK 470 THR A 72 OG1 CG2 REMARK 470 GLU A 92 CG CD OE1 OE2 REMARK 470 ARG A 93 CG CD NE CZ NH1 NH2 REMARK 470 ASP A 94 CG OD1 OD2 REMARK 470 THR A 95 OG1 CG2 REMARK 470 THR A 96 OG1 CG2 REMARK 470 ASP A 103 CG OD1 OD2 REMARK 470 ASP A 108 CG OD1 OD2 REMARK 470 ASP A 113 CG OD1 OD2 REMARK 470 ILE A 115 CG1 CG2 CD1 REMARK 470 GLN A 123 CG CD OE1 NE2 REMARK 470 PHE A 126 CG CD1 CD2 CE1 CE2 CZ REMARK 470 ASP A 127 CG OD1 OD2 REMARK 470 CYS A 135 SG REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O LEU A 249 OG1 THR A 253 2.05 REMARK 500 O GLY A 384 O HOH A 705 2.08 REMARK 500 O PRO A 319 N SER A 321 2.11 REMARK 500 OE2 GLU A 390 NH1 ARG A 393 2.15 REMARK 500 N LYS A 51 O1B GDP A 601 2.17 REMARK 500 O VAL A 251 O2' GDP A 601 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 12 -161.10 -121.94 REMARK 500 GLU A 13 -86.42 -150.31 REMARK 500 THR A 16 -120.92 -100.29 REMARK 500 PHE A 17 54.90 -173.41 REMARK 500 VAL A 27 -41.12 -149.31 REMARK 500 ASP A 31 36.25 -65.33 REMARK 500 VAL A 33 16.05 -64.01 REMARK 500 LYS A 34 177.19 161.28 REMARK 500 ARG A 36 101.38 65.32 REMARK 500 PHE A 37 -73.27 -45.25 REMARK 500 VAL A 38 111.29 52.41 REMARK 500 CYS A 39 77.04 53.45 REMARK 500 ALA A 46 114.39 -39.27 REMARK 500 PHE A 53 -51.10 -160.78 REMARK 500 ARG A 60 52.65 -63.24 REMARK 500 TYR A 61 -0.97 173.22 REMARK 500 TYR A 63 18.71 -50.80 REMARK 500 SER A 64 16.05 -158.34 REMARK 500 VAL A 67 -131.20 -107.69 REMARK 500 HIS A 68 88.53 -47.67 REMARK 500 HIS A 69 11.06 -62.96 REMARK 500 ASP A 70 -99.81 -148.78 REMARK 500 ALA A 71 -151.83 -72.16 REMARK 500 THR A 96 -134.09 -74.09 REMARK 500 ASP A 108 -67.02 -160.89 REMARK 500 TYR A 109 -179.09 67.22 REMARK 500 ASP A 113 132.53 73.56 REMARK 500 LYS A 114 80.98 65.74 REMARK 500 GLN A 123 -151.17 -173.49 REMARK 500 ALA A 125 83.43 -64.65 REMARK 500 ALA A 136 49.36 -104.82 REMARK 500 LEU A 141 -71.90 -40.45 REMARK 500 SER A 142 54.52 -62.66 REMARK 500 THR A 143 -35.99 -175.17 REMARK 500 GLN A 155 -77.37 60.95 REMARK 500 LEU A 167 32.18 -63.37 REMARK 500 PHE A 168 -33.95 -139.19 REMARK 500 ASP A 178 -85.16 -60.05 REMARK 500 PHE A 184 131.76 66.40 REMARK 500 GLN A 185 -76.20 -105.23 REMARK 500 ASP A 208 47.47 -104.45 REMARK 500 LYS A 209 -49.07 -133.52 REMARK 500 ARG A 213 -74.72 -58.79 REMARK 500 ARG A 214 10.43 -57.26 REMARK 500 GLU A 216 -111.96 -94.88 REMARK 500 VAL A 217 -75.60 13.41 REMARK 500 GLN A 221 90.57 -37.22 REMARK 500 HIS A 222 -47.80 -154.87 REMARK 500 GLU A 224 -81.03 -84.95 REMARK 500 GLN A 226 0.72 -62.56 REMARK 500 REMARK 500 THIS ENTRY HAS 85 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 602 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER A 52 OG REMARK 620 2 GDP A 601 O2B 70.1 REMARK 620 3 GDP A 601 O3B 123.2 55.7 REMARK 620 N 1 2 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GDP A 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 602 DBREF 3X1D A 1 541 UNP Q9VC57 ATLAS_DROME 1 541 SEQRES 1 A 541 MET GLY GLY SER ALA VAL GLN VAL ILE ASN ALA SER GLU SEQRES 2 A 541 GLU HIS THR PHE VAL LEU ASN GLU ASP ALA LEU SER GLU SEQRES 3 A 541 VAL LEU MET ARG ASP GLU VAL LYS ASP ARG PHE VAL CYS SEQRES 4 A 541 VAL VAL SER VAL ALA GLY ALA PHE ARG LYS GLY LYS SER SEQRES 5 A 541 PHE LEU LEU ASP PHE PHE LEU ARG TYR MET TYR SER LYS SEQRES 6 A 541 TYR VAL HIS HIS ASP ALA THR ASP TRP LEU GLY GLY GLU SEQRES 7 A 541 SER ASP PRO LEU GLU GLY PHE SER TRP ARG GLY GLY SER SEQRES 8 A 541 GLU ARG ASP THR THR GLY ILE LEU MET TRP SER ASP ILE SEQRES 9 A 541 PHE LEU HIS ASP TYR PRO ASN GLY ASP LYS ILE ALA ILE SEQRES 10 A 541 ILE LEU LEU ASP THR GLN GLY ALA PHE ASP SER GLN SER SEQRES 11 A 541 THR VAL ARG ASP CYS ALA THR VAL PHE ALA LEU SER THR SEQRES 12 A 541 MET LEU SER SER VAL GLN ILE TYR ASN LEU SER GLN ASN SEQRES 13 A 541 ILE GLN GLU ASP ASP LEU GLN HIS LEU GLN LEU PHE THR SEQRES 14 A 541 GLU TYR GLY ARG LEU ALA LEU ALA ASP THR GLY LYS LYS SEQRES 15 A 541 PRO PHE GLN ARG LEU GLN PHE LEU VAL ARG ASP TRP SER SEQRES 16 A 541 PHE PRO TYR GLU ALA GLU TYR GLY ALA LEU GLY GLY ASP SEQRES 17 A 541 LYS ILE LEU LYS ARG ARG LEU GLU VAL SER ASP LYS GLN SEQRES 18 A 541 HIS PRO GLU LEU GLN SER LEU ARG ARG HIS ILE SER SER SEQRES 19 A 541 CYS PHE THR GLU VAL ALA CYS PHE LEU MET PRO HIS PRO SEQRES 20 A 541 GLY LEU ASN VAL ALA THR ASN PRO LYS PHE ASP GLY ARG SEQRES 21 A 541 LEU GLN ASP ILE THR PRO GLU PHE LYS SER SER LEU ARG SEQRES 22 A 541 SER LEU VAL PRO MET LEU LEU ALA PRO ASP ASN LEU VAL SEQRES 23 A 541 TYR LYS GLU ILE SER GLY GLN ARG VAL ARG ALA ARG ASP SEQRES 24 A 541 LEU ILE GLN TYR PHE GLN SER TYR MET ASN ILE TYR LYS SEQRES 25 A 541 GLY ASN GLU LEU PRO GLU PRO LYS SER MET LEU VAL ALA SEQRES 26 A 541 THR ALA GLU ALA ASN HIS LEU THR ALA VAL ALA ALA ALA SEQRES 27 A 541 LYS GLU LEU TYR GLY GLN LEU MET GLU GLU VAL CYS GLY SEQRES 28 A 541 GLY THR ARG PRO TYR LEU SER THR ALA HIS LEU GLN THR SEQRES 29 A 541 GLU HIS LEU ARG VAL LYS ASP LYS ALA LEU PHE GLN PHE SEQRES 30 A 541 ALA ALA LYS ARG LYS MET GLY GLY GLU GLU PHE THR GLU SEQRES 31 A 541 LYS PHE ARG LYS GLN LEU GLU ASP ASP LEU GLU GLU VAL SEQRES 32 A 541 PHE THR ASN TYR GLN ALA HIS ASN GLU SER LYS ASN ILE SEQRES 33 A 541 PHE LYS ALA ALA ARG THR PRO ALA VAL TYR PHE ALA CYS SEQRES 34 A 541 ALA VAL ILE MET TYR ILE LEU SER GLY ILE PHE GLY LEU SEQRES 35 A 541 VAL GLY LEU TYR THR PHE ALA ASN PHE CYS ASN LEU VAL SEQRES 36 A 541 MET GLY VAL ALA LEU LEU THR LEU ALA LEU TRP ALA TYR SEQRES 37 A 541 ILE ARG TYR SER GLY GLU LEU SER ASP PHE GLY GLY LYS SEQRES 38 A 541 LEU ASP ASP PHE ALA THR LEU LEU TRP GLU LYS PHE MET SEQRES 39 A 541 ARG PRO ILE TYR HIS GLY CYS MET GLU LYS GLY ILE HIS SEQRES 40 A 541 HIS VAL ALA THR HIS ALA THR GLU MET ALA VAL GLY GLY SEQRES 41 A 541 GLY ALA ALA SER TYR ARG SER GLN THR SER VAL ASN ALA SEQRES 42 A 541 SER ASN GLY LYS VAL LYS ARG SER HET GDP A 601 28 HET MG A 602 1 HETNAM GDP GUANOSINE-5'-DIPHOSPHATE HETNAM MG MAGNESIUM ION FORMUL 2 GDP C10 H15 N5 O11 P2 FORMUL 3 MG MG 2+ FORMUL 4 HOH *6(H2 O) HELIX 1 1 ASN A 20 MET A 29 1 10 HELIX 2 2 GLY A 50 ARG A 60 1 11 HELIX 3 3 ALA A 140 LEU A 145 1 6 HELIX 4 4 GLN A 158 HIS A 164 1 7 HELIX 5 5 GLU A 170 THR A 179 1 10 HELIX 6 6 GLY A 203 ARG A 214 1 12 HELIX 7 7 LEU A 215 LYS A 220 5 6 HELIX 8 8 ILE A 232 PHE A 236 5 5 HELIX 9 9 GLY A 248 THR A 253 1 6 HELIX 10 10 THR A 265 LEU A 280 1 16 HELIX 11 11 ASP A 299 MET A 308 1 10 HELIX 12 12 MET A 322 GLN A 344 1 23 HELIX 13 13 LEU A 345 CYS A 350 1 6 HELIX 14 14 HIS A 361 GLN A 376 1 16 HELIX 15 15 GLU A 390 GLU A 401 1 12 SHEET 1 A 2 GLN A 7 ILE A 9 0 SHEET 2 A 2 LEU A 99 TRP A 101 -1 O MET A 100 N VAL A 8 SHEET 1 B 5 ILE A 118 ASP A 121 0 SHEET 2 B 5 VAL A 40 ALA A 44 1 N VAL A 41 O ILE A 118 SHEET 3 B 5 VAL A 148 SER A 154 1 O ASN A 152 N ALA A 44 SHEET 4 B 5 ARG A 186 TRP A 194 1 O GLN A 188 N GLN A 149 SHEET 5 B 5 GLU A 238 PRO A 245 1 O MET A 244 N VAL A 191 SHEET 1 C 2 GLU A 289 ILE A 290 0 SHEET 2 C 2 GLN A 293 ARG A 294 -1 N GLN A 293 O ILE A 290 LINK OG SER A 52 MG MG A 602 1555 1555 2.05 LINK O2B GDP A 601 MG MG A 602 1555 1555 2.11 LINK O3B GDP A 601 MG MG A 602 1555 1555 2.89 CISPEP 1 GLU A 14 HIS A 15 0 7.11 CISPEP 2 LYS A 34 ASP A 35 0 -13.97 CISPEP 3 CYS A 39 VAL A 40 0 8.47 CISPEP 4 HIS A 107 ASP A 108 0 2.86 CISPEP 5 TYR A 109 PRO A 110 0 -16.37 CISPEP 6 GLY A 112 ASP A 113 0 -15.27 CISPEP 7 ASP A 113 LYS A 114 0 -5.17 CISPEP 8 PRO A 282 ASP A 283 0 1.97 CISPEP 9 GLU A 318 PRO A 319 0 -26.60 CISPEP 10 SER A 321 MET A 322 0 23.19 CISPEP 11 THR A 359 ALA A 360 0 -6.03 CISPEP 12 LYS A 380 ARG A 381 0 -5.59 CISPEP 13 ASN A 406 TYR A 407 0 2.86 SITE 1 AC1 15 PHE A 47 ARG A 48 LYS A 49 GLY A 50 SITE 2 AC1 15 LYS A 51 SER A 52 PHE A 53 ARG A 192 SITE 3 AC1 15 ASP A 193 HIS A 246 PRO A 247 VAL A 251 SITE 4 AC1 15 ALA A 252 PHE A 268 MG A 602 SITE 1 AC2 4 LYS A 51 SER A 52 THR A 122 GDP A 601 CRYST1 71.617 63.907 107.762 90.00 101.60 90.00 C 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013963 0.000000 0.002867 0.00000 SCALE2 0.000000 0.015648 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009473 0.00000