HEADER HYDROLASE 22-DEC-14 3X2O TITLE NEUTRON AND X-RAY JOINT REFINED STRUCTURE OF PCCEL45A APO FORM AT TITLE 2 298K. COMPND MOL_ID: 1; COMPND 2 MOLECULE: ENDOGLUCANASE V-LIKE PROTEIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 27-206; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PHANEROCHAETE CHRYSOSPORIUM; SOURCE 3 ORGANISM_COMMON: WHITE-ROT FUNGUS; SOURCE 4 ORGANISM_TAXID: 5306; SOURCE 5 STRAIN: K-3; SOURCE 6 GENE: EGV, PCCEL45A; SOURCE 7 EXPRESSION_SYSTEM: PICHIA PASTORIS; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 4922; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: KM71H; SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PPICZA KEYWDS HYDROLASE EXPDTA NEUTRON DIFFRACTION; X-RAY DIFFRACTION AUTHOR A.NAKAMURA,T.ISHIDA,K.KUSAKA,T.YAMADA,I.TANAKA,N.NIIMURA,M.SAMEJIMA, AUTHOR 2 K.IGARASHI REVDAT 4 18-DEC-19 3X2O 1 JRNL REMARK LINK REVDAT 3 16-MAY-18 3X2O 1 REMARK REVDAT 2 07-MAR-18 3X2O 1 REMARK REVDAT 1 07-OCT-15 3X2O 0 JRNL AUTH A.NAKAMURA,T.ISHIDA,K.KUSAKA,T.YAMADA,S.FUSHINOBU,I.TANAKA, JRNL AUTH 2 S.KANEKO,K.OHTA,H.TANAKA,K.INAKA,Y.HIGUCHI,N.NIIMURA, JRNL AUTH 3 M.SAMEJIMA,K.IGARASHI JRNL TITL "NEWTON'S CRADLE" PROTON RELAY WITH AMIDE-IMIDIC ACID JRNL TITL 2 TAUTOMERIZATION IN INVERTING CELLULASE VISUALIZED BY NEUTRON JRNL TITL 3 CRYSTALLOGRAPHY. JRNL REF SCI ADV V. 1 00263 2015 JRNL REFN ESSN 2375-2548 JRNL PMID 26601228 JRNL DOI 10.1126/SCIADV.1500263 REMARK 2 REMARK 2 RESOLUTION. 1.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.9_1692) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 NEUTRON DATA. REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 18.83 REMARK 3 MIN(FOBS/SIGMA_FOBS) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 94.2 REMARK 3 NUMBER OF REFLECTIONS : 25433 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.230 REMARK 3 R VALUE (WORKING SET) : 0.228 REMARK 3 FREE R VALUE : 0.251 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 9.960 REMARK 3 FREE R VALUE TEST SET COUNT : 2548 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 18.8272 - 3.9976 0.92 1369 148 0.1543 0.1940 REMARK 3 2 3.9976 - 3.1780 0.99 1390 150 0.1508 0.1830 REMARK 3 3 3.1780 - 2.7777 1.00 1375 156 0.1554 0.1849 REMARK 3 4 2.7777 - 2.5244 1.00 1380 142 0.1612 0.2009 REMARK 3 5 2.5244 - 2.3438 0.99 1354 149 0.1734 0.1836 REMARK 3 6 2.3438 - 2.2059 0.99 1321 153 0.1811 0.1928 REMARK 3 7 2.2059 - 2.0955 0.99 1354 142 0.1957 0.2253 REMARK 3 8 2.0955 - 2.0044 0.98 1319 144 0.2176 0.2247 REMARK 3 9 2.0044 - 1.9273 0.97 1305 143 0.2272 0.2247 REMARK 3 10 1.9273 - 1.8609 0.96 1302 138 0.2471 0.2775 REMARK 3 11 1.8609 - 1.8028 0.97 1313 145 0.2589 0.2831 REMARK 3 12 1.8028 - 1.7513 0.95 1262 156 0.2905 0.3352 REMARK 3 13 1.7513 - 1.7052 0.94 1257 125 0.3076 0.3132 REMARK 3 14 1.7052 - 1.6636 0.91 1228 138 0.3153 0.3254 REMARK 3 15 1.6636 - 1.6258 0.89 1181 143 0.3273 0.3419 REMARK 3 16 1.6258 - 1.5912 0.87 1129 150 0.3468 0.3786 REMARK 3 17 1.5912 - 1.5594 0.84 1150 109 0.3579 0.3761 REMARK 3 18 1.5594 - 1.5300 0.79 1044 117 0.3906 0.3634 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.230 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 23.390 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 2766 REMARK 3 ANGLE : 1.208 4694 REMARK 3 CHIRALITY : 0.088 188 REMARK 3 PLANARITY : 0.006 612 REMARK 3 DIHEDRAL : 16.335 706 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 3 X-RAY DATA. REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 28.23 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.490 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 3 NUMBER OF REFLECTIONS : 94159 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.137 REMARK 3 R VALUE (WORKING SET) : 0.135 REMARK 3 FREE R VALUE : 0.153 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 9.970 REMARK 3 FREE R VALUE TEST SET COUNT : 9389 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 28.2442 - 3.1123 0.99 3031 331 0.1400 0.1777 REMARK 3 2 3.1123 - 2.4708 1.00 2946 324 0.1374 0.1640 REMARK 3 3 2.4708 - 2.1586 1.00 2911 320 0.1436 0.1388 REMARK 3 4 2.1586 - 1.9613 1.00 2896 312 0.1350 0.1477 REMARK 3 5 1.9613 - 1.8207 1.00 2879 315 0.1392 0.1493 REMARK 3 6 1.8207 - 1.7134 1.00 2857 308 0.1417 0.1513 REMARK 3 7 1.7134 - 1.6276 1.00 2859 329 0.1325 0.1378 REMARK 3 8 1.6276 - 1.5567 1.00 2846 319 0.1285 0.1457 REMARK 3 9 1.5567 - 1.4968 1.00 2831 317 0.1277 0.1373 REMARK 3 10 1.4968 - 1.4452 0.99 2818 308 0.1289 0.1305 REMARK 3 11 1.4452 - 1.4000 0.99 2803 339 0.1245 0.1443 REMARK 3 12 1.4000 - 1.3600 0.99 2814 316 0.1221 0.1331 REMARK 3 13 1.3600 - 1.3242 0.99 2842 298 0.1221 0.1342 REMARK 3 14 1.3242 - 1.2919 0.99 2774 324 0.1231 0.1398 REMARK 3 15 1.2919 - 1.2625 0.99 2819 306 0.1267 0.1465 REMARK 3 16 1.2625 - 1.2356 1.00 2795 325 0.1193 0.1424 REMARK 3 17 1.2356 - 1.2109 1.00 2811 316 0.1211 0.1233 REMARK 3 18 1.2109 - 1.1881 1.00 2825 305 0.1137 0.1390 REMARK 3 19 1.1881 - 1.1668 1.00 2781 333 0.1175 0.1281 REMARK 3 20 1.1668 - 1.1471 0.99 2830 285 0.1091 0.1225 REMARK 3 21 1.1471 - 1.1286 0.99 2795 322 0.1106 0.1295 REMARK 3 22 1.1286 - 1.1112 0.99 2807 309 0.1142 0.1335 REMARK 3 23 1.1112 - 1.0948 0.99 2803 294 0.1188 0.1400 REMARK 3 24 1.0948 - 1.0794 0.99 2812 328 0.1231 0.1350 REMARK 3 25 1.0794 - 1.0648 0.99 2797 297 0.1295 0.1383 REMARK 3 26 1.0648 - 1.0510 0.99 2751 315 0.1338 0.1405 REMARK 3 27 1.0510 - 1.0379 0.99 2794 324 0.1410 0.1515 REMARK 3 28 1.0379 - 1.0254 0.99 2805 289 0.1532 0.1642 REMARK 3 29 1.0254 - 1.0134 0.99 2842 282 0.1662 0.1647 REMARK 3 30 1.0134 - 1.0021 0.93 2596 299 0.1750 0.1839 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.050 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 11.350 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 27.48 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3X2O COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 15-JAN-15. REMARK 100 THE DEPOSITION ID IS D_1000097102. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 09-JUN-14 REMARK 200 TEMPERATURE (KELVIN) : 298 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PHOTON FACTORY REMARK 200 BEAMLINE : BL-5A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : STARGAZER REMARK 200 DATA SCALING SOFTWARE : STARGAZER REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 99189 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.000 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 200 DATA REDUNDANCY : 13.10 REMARK 200 R MERGE (I) : 0.08000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 106.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.02 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.4 REMARK 200 DATA REDUNDANCY IN SHELL : 6.30 REMARK 200 R MERGE FOR SHELL (I) : 0.29900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 6.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 230 REMARK 230 EXPERIMENTAL DETAILS REMARK 230 EXPERIMENT TYPE : NEUTRON DIFFRACTION REMARK 230 DATE OF DATA COLLECTION : 25-APR-14 REMARK 230 TEMPERATURE (KELVIN) : 298.0 REMARK 230 PH : 8.00 REMARK 230 NUMBER OF CRYSTALS USED : 1 REMARK 230 REMARK 230 NEUTRON SOURCE : SPALLATION SOURCE REMARK 230 BEAMLINE : MANDI REMARK 230 WAVELENGTH OR RANGE (A) : 1.5-20.4 REMARK 230 MONOCHROMATOR : NEUTRON TIME-OF-FLIGHT REMARK 230 OPTICS : NULL REMARK 230 REMARK 230 DETECTOR TYPE : STORAGE PHOSPHORS REMARK 230 DETECTOR MANUFACTURER : IBIX (BL03), J-PARC REMARK 230 INTENSITY-INTEGRATION SOFTWARE : STARGAZER REMARK 230 DATA SCALING SOFTWARE : STARGAZER REMARK 230 REMARK 230 NUMBER OF UNIQUE REFLECTIONS : 25581 REMARK 230 RESOLUTION RANGE HIGH (A) : 1.500 REMARK 230 RESOLUTION RANGE LOW (A) : 20.400 REMARK 230 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 230 REMARK 230 OVERALL. REMARK 230 COMPLETENESS FOR RANGE (%) : 93.3 REMARK 230 DATA REDUNDANCY : 3.900 REMARK 230 R MERGE (I) : 0.24500 REMARK 230 R SYM (I) : NULL REMARK 230 FOR THE DATA SET : 3.9000 REMARK 230 REMARK 230 IN THE HIGHEST RESOLUTION SHELL. REMARK 230 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.50 REMARK 230 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.55 REMARK 230 COMPLETENESS FOR SHELL (%) : 81.1 REMARK 230 DATA REDUNDANCY IN SHELL : 2.10 REMARK 230 R MERGE FOR SHELL (I) : 0.50100 REMARK 230 R SYM FOR SHELL (I) : NULL REMARK 230 FOR SHELL : 1.400 REMARK 230 REMARK 230 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 230 SOFTWARE USED : NULL REMARK 230 STARTING MODEL: NULL REMARK 230 REMARK 230 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.96 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.41 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 60% 3-METHYL-1,5-PENTANEDIOL, 50 MM REMARK 280 TRIS-HCL, PH 7.5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE REMARK 280 293K, PH 8.0 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 23.07600 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 32.14250 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 29.53350 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 32.14250 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 23.07600 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 29.53350 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLN A 90 CG CD OE1 NE2 REMARK 470 GLN A 93 CG CD OE1 NE2 REMARK 470 GLN A 106 CG CD OE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OH TYR A 67 OE2 GLU A 94 2.12 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 63 11.99 -144.88 REMARK 500 ALA A 171 -91.62 -127.52 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3X2G RELATED DB: PDB REMARK 900 RELATED ID: 3X2H RELATED DB: PDB REMARK 900 RELATED ID: 3X2I RELATED DB: PDB REMARK 900 RELATED ID: 3X2J RELATED DB: PDB REMARK 900 RELATED ID: 3X2K RELATED DB: PDB REMARK 900 RELATED ID: 3X2L RELATED DB: PDB REMARK 900 RELATED ID: 3X2M RELATED DB: PDB REMARK 900 RELATED ID: 3X2N RELATED DB: PDB REMARK 900 RELATED ID: 3X2P RELATED DB: PDB DBREF 3X2O A 1 180 UNP B3Y002 B3Y002_PHACH 27 206 SEQRES 1 A 180 ALA THR GLY GLY TYR VAL GLN GLN ALA THR GLY GLN ALA SEQRES 2 A 180 SER PHE THR MET TYR SER GLY CYS GLY SER PRO ALA CYS SEQRES 3 A 180 GLY LYS ALA ALA SER GLY PHE THR ALA ALA ILE ASN GLN SEQRES 4 A 180 LEU ALA PHE GLY SER ALA PRO GLY LEU GLY ALA GLY ASP SEQRES 5 A 180 ALA CYS GLY ARG CYS PHE ALA LEU THR GLY ASN HIS ASP SEQRES 6 A 180 PRO TYR SER PRO ASN TYR THR GLY PRO PHE GLY GLN THR SEQRES 7 A 180 ILE VAL VAL LYS VAL THR ASP LEU CYS PRO VAL GLN GLY SEQRES 8 A 180 41Q GLN GLU PHE CYS GLY GLN THR THR SER ASN PRO THR SEQRES 9 A 180 ASN GLN HIS GLY MET PRO PHE HIS PHE ASP ILE CYS GLU SEQRES 10 A 180 ASP THR GLY GLY SER ALA LYS PHE PHE PRO SER GLY HIS SEQRES 11 A 180 GLY ALA LEU THR GLY THR PHE THR GLU VAL SER CYS SER SEQRES 12 A 180 GLN TRP SER GLY SER ASP GLY GLY GLN LEU TRP ASN GLY SEQRES 13 A 180 ALA CYS LEU SER GLY GLU THR ALA PRO ASN TRP PRO SER SEQRES 14 A 180 THR ALA CYS GLY ASN LYS GLY THR ALA PRO SER MODRES 3X2O 41Q A 92 ASN 4-IMINO-L-HOMOSERINE HET 41Q A 92 17 HETNAM 41Q 4-IMINO-L-HOMOSERINE FORMUL 1 41Q C4 H8 N2 O3 FORMUL 2 DOD *152(D2 O) HELIX 1 1 ALA A 1 TYR A 5 5 5 HELIX 2 2 GLN A 39 GLY A 43 1 5 HELIX 3 3 41Q A 92 GLY A 97 1 6 HELIX 4 4 GLY A 120 PHE A 126 1 7 HELIX 5 5 SER A 141 TRP A 145 5 5 HELIX 6 6 LEU A 159 ALA A 164 5 6 SHEET 1 A 7 THR A 10 TYR A 18 0 SHEET 2 A 7 PHE A 111 CYS A 116 1 O ILE A 115 N THR A 16 SHEET 3 A 7 THR A 34 ASN A 38 -1 N ALA A 36 O ASP A 114 SHEET 4 A 7 ILE A 79 CYS A 87 1 O CYS A 87 N ILE A 37 SHEET 5 A 7 CYS A 57 HIS A 64 -1 N LEU A 60 O ILE A 79 SHEET 6 A 7 LEU A 133 VAL A 140 -1 O THR A 138 N ALA A 59 SHEET 7 A 7 THR A 10 TYR A 18 -1 N PHE A 15 O LEU A 133 SSBOND 1 CYS A 21 CYS A 116 1555 1555 2.01 SSBOND 2 CYS A 26 CYS A 54 1555 1555 2.03 SSBOND 3 CYS A 57 CYS A 142 1555 1555 2.03 SSBOND 4 CYS A 87 CYS A 96 1555 1555 2.02 SSBOND 5 CYS A 158 CYS A 172 1555 1555 2.03 LINK C GLY A 91 N 41Q A 92 1555 1555 1.33 LINK C 41Q A 92 N GLN A 93 1555 1555 1.32 CISPEP 1 GLY A 73 PRO A 74 0 1.27 CISPEP 2 TRP A 167 PRO A 168 0 1.72 CRYST1 46.152 59.067 64.285 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.021668 0.000000 0.000000 0.00000 SCALE2 0.000000 0.016930 0.000000 0.00000 SCALE3 0.000000 0.000000 0.015556 0.00000