HEADER REPLICATION REGULATOR 16-JAN-15 3X38 TITLE CRYSTAL STRUCTURE OF THE C-TERMINAL DOMAIN OF SLD7 COMPND MOL_ID: 1; COMPND 2 MOLECULE: MITOCHONDRIAL MORPHOGENESIS PROTEIN SLD7; COMPND 3 CHAIN: A, B, C, D; COMPND 4 FRAGMENT: C-TERMINAL DOMAIN (UNP RESIDUES 178-257); COMPND 5 SYNONYM: SYNTHETIC LETHALITY WITH DPB11-24 MUTATION PROTEIN 7; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE S288C; SOURCE 3 ORGANISM_COMMON: BAKER'S YEAST; SOURCE 4 ORGANISM_TAXID: 559292; SOURCE 5 STRAIN: ATCC 204508 / S288C; SOURCE 6 GENE: SLD7, YOR060C, YOR29-11; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PET26B(+) KEYWDS ALPHA HELIX, REPLICATION REGULATOR EXPDTA X-RAY DIFFRACTION AUTHOR H.ITOU,H.ARAKI,Y.SHIRAKIHARA REVDAT 2 20-MAR-24 3X38 1 REMARK SEQADV REVDAT 1 19-AUG-15 3X38 0 JRNL AUTH H.ITOU,Y.SHIRAKIHARA,H.ARAKI JRNL TITL THE QUATERNARY STRUCTURE OF THE EUKARYOTIC DNA REPLICATION JRNL TITL 2 PROTEINS SLD7 AND SLD3. JRNL REF ACTA CRYSTALLOGR.,SECT.D V. 71 1649 2015 JRNL REFN ISSN 0907-4449 JRNL PMID 26249346 JRNL DOI 10.1107/S1399004715010457 REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.8.4_1496) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 34.01 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.5 REMARK 3 NUMBER OF REFLECTIONS : 34600 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.208 REMARK 3 R VALUE (WORKING SET) : 0.207 REMARK 3 FREE R VALUE : 0.234 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.020 REMARK 3 FREE R VALUE TEST SET COUNT : 1736 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 34.0130 - 4.1208 0.85 2463 108 0.2360 0.2459 REMARK 3 2 4.1208 - 3.2716 0.98 2734 164 0.1760 0.2009 REMARK 3 3 3.2716 - 2.8583 1.00 2768 146 0.1979 0.2044 REMARK 3 4 2.8583 - 2.5971 1.00 2791 139 0.2050 0.2275 REMARK 3 5 2.5971 - 2.4110 1.00 2788 137 0.1954 0.2325 REMARK 3 6 2.4110 - 2.2689 1.00 2777 134 0.2048 0.2499 REMARK 3 7 2.2689 - 2.1553 1.00 2768 149 0.2020 0.2474 REMARK 3 8 2.1553 - 2.0615 1.00 2778 159 0.2072 0.2729 REMARK 3 9 2.0615 - 1.9821 1.00 2720 165 0.2163 0.2554 REMARK 3 10 1.9821 - 1.9137 1.00 2776 163 0.2406 0.2859 REMARK 3 11 1.9137 - 1.8539 1.00 2780 136 0.2389 0.2736 REMARK 3 12 1.8539 - 1.8009 0.99 2721 136 0.2530 0.2963 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.190 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 23.490 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 16.35 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 2583 REMARK 3 ANGLE : 1.029 3453 REMARK 3 CHIRALITY : 0.038 399 REMARK 3 PLANARITY : 0.004 429 REMARK 3 DIHEDRAL : 13.545 990 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3X38 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 28-JAN-15. REMARK 100 THE DEPOSITION ID IS D_1000097122. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 13-FEB-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PHOTON FACTORY REMARK 200 BEAMLINE : BL-17A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.00000 REMARK 200 MONOCHROMATOR : SI (111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 270 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 35136 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.5 REMARK 200 DATA REDUNDANCY : 5.600 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.83 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.8 REMARK 200 DATA REDUNDANCY IN SHELL : 5.50 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 4.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SOLVE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.54 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.30 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M ACETATE-NAOH, 0.1M LISO4, 12.5% REMARK 280 PEG 8K, PH 4.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 30.26900 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1840 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 9390 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -24.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1700 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 9440 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -34.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 177 REMARK 465 ASN A 178 REMARK 465 ASP A 179 REMARK 465 LEU A 258 REMARK 465 GLU A 259 REMARK 465 HIS A 260 REMARK 465 HIS A 261 REMARK 465 HIS A 262 REMARK 465 HIS A 263 REMARK 465 HIS A 264 REMARK 465 HIS A 265 REMARK 465 MET B 177 REMARK 465 ASN B 178 REMARK 465 ASP B 179 REMARK 465 GLU B 259 REMARK 465 HIS B 260 REMARK 465 HIS B 261 REMARK 465 HIS B 262 REMARK 465 HIS B 263 REMARK 465 HIS B 264 REMARK 465 HIS B 265 REMARK 465 MET C 177 REMARK 465 ASN C 178 REMARK 465 ASP C 179 REMARK 465 GLU C 259 REMARK 465 HIS C 260 REMARK 465 HIS C 261 REMARK 465 HIS C 262 REMARK 465 HIS C 263 REMARK 465 HIS C 264 REMARK 465 HIS C 265 REMARK 465 MET D 177 REMARK 465 ASN D 178 REMARK 465 ASP D 179 REMARK 465 SER D 257 REMARK 465 LEU D 258 REMARK 465 GLU D 259 REMARK 465 HIS D 260 REMARK 465 HIS D 261 REMARK 465 HIS D 262 REMARK 465 HIS D 263 REMARK 465 HIS D 264 REMARK 465 HIS D 265 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH D 495 O HOH D 534 1.83 REMARK 500 O HOH D 504 O HOH D 522 1.85 REMARK 500 O HOH B 335 O HOH B 394 1.88 REMARK 500 O HOH C 401 O HOH C 408 1.91 REMARK 500 O HOH A 446 O HOH A 458 1.92 REMARK 500 O HOH C 301 O HOH C 331 1.93 REMARK 500 O HOH D 496 O HOH D 497 1.96 REMARK 500 O HOH D 524 O HOH D 528 1.96 REMARK 500 O HOH A 475 O HOH A 506 1.97 REMARK 500 O HOH B 350 O HOH B 400 1.98 REMARK 500 O HOH A 468 O HOH A 476 1.98 REMARK 500 O HOH A 468 O HOH A 506 1.99 REMARK 500 O HOH D 440 O HOH D 501 1.99 REMARK 500 O HOH A 447 O HOH A 463 2.01 REMARK 500 O HOH D 500 O HOH D 512 2.01 REMARK 500 OE1 GLN C 209 O HOH C 403 2.03 REMARK 500 O HOH D 501 O HOH D 505 2.03 REMARK 500 O HOH C 404 O HOH D 523 2.03 REMARK 500 O HOH B 392 O HOH B 398 2.04 REMARK 500 O HOH D 496 O HOH D 514 2.04 REMARK 500 O HOH C 388 O HOH C 394 2.06 REMARK 500 O HOH D 476 O HOH D 484 2.06 REMARK 500 O HOH D 510 O HOH D 516 2.06 REMARK 500 O HOH C 394 O HOH C 411 2.07 REMARK 500 O HOH A 464 O HOH A 482 2.08 REMARK 500 O HOH B 355 O HOH B 377 2.09 REMARK 500 O HOH D 448 O HOH D 472 2.10 REMARK 500 O HOH C 396 O HOH D 508 2.11 REMARK 500 NZ LYS A 180 O HOH A 411 2.12 REMARK 500 O HOH B 319 O HOH B 388 2.14 REMARK 500 O HOH A 470 O HOH B 354 2.14 REMARK 500 NZ LYS D 256 O HOH D 503 2.15 REMARK 500 O HOH C 395 O HOH C 406 2.15 REMARK 500 O HOH B 351 O HOH B 383 2.15 REMARK 500 O HOH D 511 O HOH D 517 2.15 REMARK 500 O HOH A 491 O HOH A 513 2.16 REMARK 500 O HOH A 424 O HOH A 469 2.16 REMARK 500 O HOH C 362 O HOH D 491 2.17 REMARK 500 NZ LYS C 252 O HOH C 397 2.18 REMARK 500 O ARG C 199 O HOH C 385 2.18 REMARK 500 OD2 ASP B 225 O HOH B 355 2.18 REMARK 500 O HOH C 380 O HOH C 381 2.19 REMARK 500 O HOH A 504 O HOH B 388 2.19 REMARK 500 O HOH D 434 O HOH D 443 2.19 REMARK 500 O HOH A 478 O HOH A 480 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OE1 GLU D 241 O HOH C 406 1455 1.88 REMARK 500 O HOH A 460 O HOH D 462 1545 1.97 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LEU C 198 CA - CB - CG ANGL. DEV. = 14.1 DEGREES REMARK 500 LEU D 211 CA - CB - CG ANGL. DEV. = 14.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 181 94.31 56.09 REMARK 500 ILE C 205 -101.52 -70.17 REMARK 500 THR C 206 -169.85 -170.08 REMARK 500 ASP C 207 44.81 36.37 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 D 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 D 302 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3X37 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE N-TERMINAL DOMAIN OF SLD7 IN COMPLEX WITH REMARK 900 SLD3. DBREF 3X38 A 178 257 UNP Q08457 SLD7_YEAST 178 257 DBREF 3X38 B 178 257 UNP Q08457 SLD7_YEAST 178 257 DBREF 3X38 C 178 257 UNP Q08457 SLD7_YEAST 178 257 DBREF 3X38 D 178 257 UNP Q08457 SLD7_YEAST 178 257 SEQADV 3X38 MET A 177 UNP Q08457 EXPRESSION TAG SEQADV 3X38 LEU A 258 UNP Q08457 EXPRESSION TAG SEQADV 3X38 GLU A 259 UNP Q08457 EXPRESSION TAG SEQADV 3X38 HIS A 260 UNP Q08457 EXPRESSION TAG SEQADV 3X38 HIS A 261 UNP Q08457 EXPRESSION TAG SEQADV 3X38 HIS A 262 UNP Q08457 EXPRESSION TAG SEQADV 3X38 HIS A 263 UNP Q08457 EXPRESSION TAG SEQADV 3X38 HIS A 264 UNP Q08457 EXPRESSION TAG SEQADV 3X38 HIS A 265 UNP Q08457 EXPRESSION TAG SEQADV 3X38 MET B 177 UNP Q08457 EXPRESSION TAG SEQADV 3X38 LEU B 258 UNP Q08457 EXPRESSION TAG SEQADV 3X38 GLU B 259 UNP Q08457 EXPRESSION TAG SEQADV 3X38 HIS B 260 UNP Q08457 EXPRESSION TAG SEQADV 3X38 HIS B 261 UNP Q08457 EXPRESSION TAG SEQADV 3X38 HIS B 262 UNP Q08457 EXPRESSION TAG SEQADV 3X38 HIS B 263 UNP Q08457 EXPRESSION TAG SEQADV 3X38 HIS B 264 UNP Q08457 EXPRESSION TAG SEQADV 3X38 HIS B 265 UNP Q08457 EXPRESSION TAG SEQADV 3X38 MET C 177 UNP Q08457 EXPRESSION TAG SEQADV 3X38 LEU C 258 UNP Q08457 EXPRESSION TAG SEQADV 3X38 GLU C 259 UNP Q08457 EXPRESSION TAG SEQADV 3X38 HIS C 260 UNP Q08457 EXPRESSION TAG SEQADV 3X38 HIS C 261 UNP Q08457 EXPRESSION TAG SEQADV 3X38 HIS C 262 UNP Q08457 EXPRESSION TAG SEQADV 3X38 HIS C 263 UNP Q08457 EXPRESSION TAG SEQADV 3X38 HIS C 264 UNP Q08457 EXPRESSION TAG SEQADV 3X38 HIS C 265 UNP Q08457 EXPRESSION TAG SEQADV 3X38 MET D 177 UNP Q08457 EXPRESSION TAG SEQADV 3X38 LEU D 258 UNP Q08457 EXPRESSION TAG SEQADV 3X38 GLU D 259 UNP Q08457 EXPRESSION TAG SEQADV 3X38 HIS D 260 UNP Q08457 EXPRESSION TAG SEQADV 3X38 HIS D 261 UNP Q08457 EXPRESSION TAG SEQADV 3X38 HIS D 262 UNP Q08457 EXPRESSION TAG SEQADV 3X38 HIS D 263 UNP Q08457 EXPRESSION TAG SEQADV 3X38 HIS D 264 UNP Q08457 EXPRESSION TAG SEQADV 3X38 HIS D 265 UNP Q08457 EXPRESSION TAG SEQRES 1 A 89 MET ASN ASP LYS ARG LEU GLN PHE ASN GLU THR LEU SER SEQRES 2 A 89 LYS LEU ILE LEU GLY GLY LEU ARG LEU ARG GLY ILE SER SEQRES 3 A 89 ASN SER ILE THR ASP TYR GLN LYS LEU TYR LYS ILE THR SEQRES 4 A 89 PHE ASP ALA ALA GLU PHE THR HIS ARG ASP GLU LEU LYS SEQRES 5 A 89 ARG ILE SER MET GLY SER GLY GLU GLU VAL SER PHE GLU SEQRES 6 A 89 SER LEU GLN GLU THR VAL GLU THR LEU LEU LYS LEU PHE SEQRES 7 A 89 THR LYS SER LEU GLU HIS HIS HIS HIS HIS HIS SEQRES 1 B 89 MET ASN ASP LYS ARG LEU GLN PHE ASN GLU THR LEU SER SEQRES 2 B 89 LYS LEU ILE LEU GLY GLY LEU ARG LEU ARG GLY ILE SER SEQRES 3 B 89 ASN SER ILE THR ASP TYR GLN LYS LEU TYR LYS ILE THR SEQRES 4 B 89 PHE ASP ALA ALA GLU PHE THR HIS ARG ASP GLU LEU LYS SEQRES 5 B 89 ARG ILE SER MET GLY SER GLY GLU GLU VAL SER PHE GLU SEQRES 6 B 89 SER LEU GLN GLU THR VAL GLU THR LEU LEU LYS LEU PHE SEQRES 7 B 89 THR LYS SER LEU GLU HIS HIS HIS HIS HIS HIS SEQRES 1 C 89 MET ASN ASP LYS ARG LEU GLN PHE ASN GLU THR LEU SER SEQRES 2 C 89 LYS LEU ILE LEU GLY GLY LEU ARG LEU ARG GLY ILE SER SEQRES 3 C 89 ASN SER ILE THR ASP TYR GLN LYS LEU TYR LYS ILE THR SEQRES 4 C 89 PHE ASP ALA ALA GLU PHE THR HIS ARG ASP GLU LEU LYS SEQRES 5 C 89 ARG ILE SER MET GLY SER GLY GLU GLU VAL SER PHE GLU SEQRES 6 C 89 SER LEU GLN GLU THR VAL GLU THR LEU LEU LYS LEU PHE SEQRES 7 C 89 THR LYS SER LEU GLU HIS HIS HIS HIS HIS HIS SEQRES 1 D 89 MET ASN ASP LYS ARG LEU GLN PHE ASN GLU THR LEU SER SEQRES 2 D 89 LYS LEU ILE LEU GLY GLY LEU ARG LEU ARG GLY ILE SER SEQRES 3 D 89 ASN SER ILE THR ASP TYR GLN LYS LEU TYR LYS ILE THR SEQRES 4 D 89 PHE ASP ALA ALA GLU PHE THR HIS ARG ASP GLU LEU LYS SEQRES 5 D 89 ARG ILE SER MET GLY SER GLY GLU GLU VAL SER PHE GLU SEQRES 6 D 89 SER LEU GLN GLU THR VAL GLU THR LEU LEU LYS LEU PHE SEQRES 7 D 89 THR LYS SER LEU GLU HIS HIS HIS HIS HIS HIS HET SO4 A 301 5 HET GOL A 302 6 HET SO4 D 301 5 HET SO4 D 302 5 HETNAM SO4 SULFATE ION HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 5 SO4 3(O4 S 2-) FORMUL 6 GOL C3 H8 O3 FORMUL 9 HOH *474(H2 O) HELIX 1 1 ARG A 181 ARG A 199 1 19 HELIX 2 2 ASP A 207 HIS A 223 1 17 HELIX 3 3 HIS A 223 MET A 232 1 10 HELIX 4 4 SER A 239 THR A 255 1 17 HELIX 5 5 ARG B 181 ARG B 199 1 19 HELIX 6 6 ASP B 207 HIS B 223 1 17 HELIX 7 7 HIS B 223 MET B 232 1 10 HELIX 8 8 SER B 239 THR B 255 1 17 HELIX 9 9 ARG C 181 ARG C 199 1 19 HELIX 10 10 ASP C 207 HIS C 223 1 17 HELIX 11 11 HIS C 223 MET C 232 1 10 HELIX 12 12 SER C 239 LYS C 256 1 18 HELIX 13 13 ARG D 181 ARG D 199 1 19 HELIX 14 14 THR D 206 HIS D 223 1 18 HELIX 15 15 HIS D 223 MET D 232 1 10 HELIX 16 16 SER D 239 THR D 255 1 17 CISPEP 1 LYS A 180 ARG A 181 0 23.80 SITE 1 AC1 5 LEU A 182 GLN A 183 GLU A 186 HOH A 422 SITE 2 AC1 5 LYS B 252 SITE 1 AC2 4 ARG A 181 LEU A 182 GLN A 183 HOH A 459 SITE 1 AC3 5 HOH A 472 HOH A 499 LEU D 182 GLN D 183 SITE 2 AC3 5 GLU D 186 SITE 1 AC4 8 LYS C 180 ARG C 181 LEU C 182 ASN C 185 SITE 2 AC4 8 LEU D 198 ARG D 199 GLY D 200 HOH D 440 CRYST1 34.094 60.538 93.130 90.00 94.10 90.00 P 1 21 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.029331 0.000000 0.002100 0.00000 SCALE2 0.000000 0.016519 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010765 0.00000