data_3ZDA # _entry.id 3ZDA # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.383 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3ZDA pdb_00003zda 10.2210/pdb3zda/pdb PDBE EBI-54862 ? ? WWPDB D_1290054862 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.content_type _pdbx_database_related.details PDB 3ZD8 unspecified 'POTASSIUM BOUND STRUCTURE OF E. COLI EXOIX IN P1' PDB 3ZD9 unspecified 'POTASSIUM BOUND STRUCTURE OF E. COLI EXOIX IN P21' PDB 3ZDB unspecified 'STRUCTURE OF E. COLI EXOIX IN COMPLEX WITH THE PALINDROMIC 5OV4 DNA OLIGONUCLEOTIDE, DI-MAGNESIUM AND POTASSIUM' PDB 3ZDC unspecified 'STRUCTURE OF E. COLI EXOIX IN COMPLEX WITH THE PALINDROMIC 5OV4 DNA OLIGONUCLEOTIDE, POTASSIUM AND CALCIUM' PDB 3ZDD unspecified 'STRUCTURE OF E. COLI EXOIX IN COMPLEX WITH THE PALINDROMIC 5OV6 OLIGONUCLEOTIDE AND POTASSIUM' PDB 3ZDE unspecified 'POTASSIUM FREE STRUCTURE OF E. COLI EXOIX' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3ZDA _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 2012-11-26 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Hemsworth, G.R.' 1 'Anstey-Gilbert, C.S.' 2 'Flemming, C.S.' 3 'Hodskinson, M.R.G.' 4 'Zhang, J.' 5 'Sedelnikova, S.E.' 6 'Stillman, T.J.' 7 'Sayers, J.R.' 8 'Artymiuk, P.J.' 9 # _citation.id primary _citation.title 'The Structure of E. Coli Exoix - Implications for DNA Binding and Catalysis in Flap Endonucleases' _citation.journal_abbrev 'Nucleic Acids Res.' _citation.journal_volume 41 _citation.page_first 8357 _citation.page_last ? _citation.year 2013 _citation.journal_id_ASTM NARHAD _citation.country UK _citation.journal_id_ISSN 0305-1048 _citation.journal_id_CSD 0389 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 23821668 _citation.pdbx_database_id_DOI 10.1093/NAR/GKT591 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Anstey-Gilbert, C.S.' 1 ? primary 'Hemsworth, G.R.' 2 ? primary 'Flemming, C.S.' 3 ? primary 'Hodskinson, M.R.G.' 4 ? primary 'Zhang, J.' 5 ? primary 'Sedelnikova, S.E.' 6 ? primary 'Stillman, T.J.' 7 ? primary 'Sayers, J.R.' 8 ? primary 'Artymiuk, P.J.' 9 ? # _cell.entry_id 3ZDA _cell.length_a 66.203 _cell.length_b 154.820 _cell.length_c 34.473 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3ZDA _symmetry.space_group_name_H-M 'P 21 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'PROTEIN XNI' 28203.158 1 3.1.-.- ? ? ? 2 polymer syn "5'-D(*GP*CP*GP*CP)-3'" 1191.818 1 ? ? ? ? 3 polymer syn "5'-D(*AP*AP*GP*CP*GP*CP)-3'" 1818.231 1 ? ? ? ? 4 non-polymer syn 'POTASSIUM ION' 39.098 1 ? ? ? ? 5 non-polymer syn 'MAGNESIUM ION' 24.305 1 ? ? ? ? 6 non-polymer syn 'PIVALIC ACID' 102.132 1 ? ? ? ? 7 non-polymer syn 'PHOSPHATE ION' 94.971 1 ? ? ? ? 8 water nat water 18.015 243 ? ? ? ? # loop_ _entity_name_com.entity_id _entity_name_com.name 1 EXOIX 2 'FLAP1 FRAGMENT' 3 'FLAP1 FRAGMENT' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;MAVHLLIVDALNLIRRIHAVQGSPCVETCQHALDQLIMHSQPTHAVAVFDDENRSSGWRHQRLPDYKAGRPPMPEELHDE MPALRAAFEQRGVPCWSTSGNEADDLAATLAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGV QPQQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFLCRDIARLQTDLHI DGNLQQLRLVR ; ;MAVHLLIVDALNLIRRIHAVQGSPCVETCQHALDQLIMHSQPTHAVAVFDDENRSSGWRHQRLPDYKAGRPPMPEELHDE MPALRAAFEQRGVPCWSTSGNEADDLAATLAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGV QPQQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFLCRDIARLQTDLHI DGNLQQLRLVR ; A ? 2 polydeoxyribonucleotide no no '(DG)(DC)(DG)(DC)' GCGC B ? 3 polydeoxyribonucleotide no no '(DA)(DA)(DG)(DC)(DG)(DC)' AAGCGC C ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 ALA n 1 3 VAL n 1 4 HIS n 1 5 LEU n 1 6 LEU n 1 7 ILE n 1 8 VAL n 1 9 ASP n 1 10 ALA n 1 11 LEU n 1 12 ASN n 1 13 LEU n 1 14 ILE n 1 15 ARG n 1 16 ARG n 1 17 ILE n 1 18 HIS n 1 19 ALA n 1 20 VAL n 1 21 GLN n 1 22 GLY n 1 23 SER n 1 24 PRO n 1 25 CYS n 1 26 VAL n 1 27 GLU n 1 28 THR n 1 29 CYS n 1 30 GLN n 1 31 HIS n 1 32 ALA n 1 33 LEU n 1 34 ASP n 1 35 GLN n 1 36 LEU n 1 37 ILE n 1 38 MET n 1 39 HIS n 1 40 SER n 1 41 GLN n 1 42 PRO n 1 43 THR n 1 44 HIS n 1 45 ALA n 1 46 VAL n 1 47 ALA n 1 48 VAL n 1 49 PHE n 1 50 ASP n 1 51 ASP n 1 52 GLU n 1 53 ASN n 1 54 ARG n 1 55 SER n 1 56 SER n 1 57 GLY n 1 58 TRP n 1 59 ARG n 1 60 HIS n 1 61 GLN n 1 62 ARG n 1 63 LEU n 1 64 PRO n 1 65 ASP n 1 66 TYR n 1 67 LYS n 1 68 ALA n 1 69 GLY n 1 70 ARG n 1 71 PRO n 1 72 PRO n 1 73 MET n 1 74 PRO n 1 75 GLU n 1 76 GLU n 1 77 LEU n 1 78 HIS n 1 79 ASP n 1 80 GLU n 1 81 MET n 1 82 PRO n 1 83 ALA n 1 84 LEU n 1 85 ARG n 1 86 ALA n 1 87 ALA n 1 88 PHE n 1 89 GLU n 1 90 GLN n 1 91 ARG n 1 92 GLY n 1 93 VAL n 1 94 PRO n 1 95 CYS n 1 96 TRP n 1 97 SER n 1 98 THR n 1 99 SER n 1 100 GLY n 1 101 ASN n 1 102 GLU n 1 103 ALA n 1 104 ASP n 1 105 ASP n 1 106 LEU n 1 107 ALA n 1 108 ALA n 1 109 THR n 1 110 LEU n 1 111 ALA n 1 112 VAL n 1 113 LYS n 1 114 VAL n 1 115 THR n 1 116 GLN n 1 117 ALA n 1 118 GLY n 1 119 HIS n 1 120 GLN n 1 121 ALA n 1 122 THR n 1 123 ILE n 1 124 VAL n 1 125 SER n 1 126 THR n 1 127 ASP n 1 128 LYS n 1 129 GLY n 1 130 TYR n 1 131 CYS n 1 132 GLN n 1 133 LEU n 1 134 LEU n 1 135 SER n 1 136 PRO n 1 137 THR n 1 138 LEU n 1 139 ARG n 1 140 ILE n 1 141 ARG n 1 142 ASP n 1 143 TYR n 1 144 PHE n 1 145 GLN n 1 146 LYS n 1 147 ARG n 1 148 TRP n 1 149 LEU n 1 150 ASP n 1 151 ALA n 1 152 PRO n 1 153 PHE n 1 154 ILE n 1 155 ASP n 1 156 LYS n 1 157 GLU n 1 158 PHE n 1 159 GLY n 1 160 VAL n 1 161 GLN n 1 162 PRO n 1 163 GLN n 1 164 GLN n 1 165 LEU n 1 166 PRO n 1 167 ASP n 1 168 TYR n 1 169 TRP n 1 170 GLY n 1 171 LEU n 1 172 ALA n 1 173 GLY n 1 174 ILE n 1 175 SER n 1 176 SER n 1 177 SER n 1 178 LYS n 1 179 VAL n 1 180 PRO n 1 181 GLY n 1 182 VAL n 1 183 ALA n 1 184 GLY n 1 185 ILE n 1 186 GLY n 1 187 PRO n 1 188 LYS n 1 189 SER n 1 190 ALA n 1 191 THR n 1 192 GLN n 1 193 LEU n 1 194 LEU n 1 195 VAL n 1 196 GLU n 1 197 PHE n 1 198 GLN n 1 199 SER n 1 200 LEU n 1 201 GLU n 1 202 GLY n 1 203 ILE n 1 204 TYR n 1 205 GLU n 1 206 ASN n 1 207 LEU n 1 208 ASP n 1 209 ALA n 1 210 VAL n 1 211 ALA n 1 212 GLU n 1 213 LYS n 1 214 TRP n 1 215 ARG n 1 216 LYS n 1 217 LYS n 1 218 LEU n 1 219 GLU n 1 220 THR n 1 221 HIS n 1 222 LYS n 1 223 GLU n 1 224 MET n 1 225 ALA n 1 226 PHE n 1 227 LEU n 1 228 CYS n 1 229 ARG n 1 230 ASP n 1 231 ILE n 1 232 ALA n 1 233 ARG n 1 234 LEU n 1 235 GLN n 1 236 THR n 1 237 ASP n 1 238 LEU n 1 239 HIS n 1 240 ILE n 1 241 ASP n 1 242 GLY n 1 243 ASN n 1 244 LEU n 1 245 GLN n 1 246 GLN n 1 247 LEU n 1 248 ARG n 1 249 LEU n 1 250 VAL n 1 251 ARG n 2 1 DG n 2 2 DC n 2 3 DG n 2 4 DC n 3 1 DA n 3 2 DA n 3 3 DG n 3 4 DC n 3 5 DG n 3 6 DC n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 'XL-1 BLUE' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'ESCHERICHIA COLI' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 562 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'ESCHERICHIA COLI' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant PCI857 _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector PJONEX _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _pdbx_entity_src_syn.entity_id _pdbx_entity_src_syn.pdbx_src_id _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_entity_src_syn.organism_scientific _pdbx_entity_src_syn.organism_common_name _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.details 2 1 sample ? ? 'SYNTHETIC CONSTRUCT' ? 32630 ? 3 1 sample ? ? 'SYNTHETIC CONSTRUCT' ? 32630 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform 1 UNP XNI_ECO57 1 ? ? Q8X6R9 ? 2 PDB 3ZDA 2 ? ? 3ZDA ? 3 PDB 3ZDA 3 ? ? 3ZDA ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3ZDA A 1 ? 251 ? Q8X6R9 1 ? 251 ? 1 251 2 2 3ZDA B 1 ? 4 ? 3ZDA 1 ? 4 ? 1 4 3 3 3ZDA C 1 ? 6 ? 3ZDA 11 ? 16 ? 11 16 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 K non-polymer . 'POTASSIUM ION' ? 'K 1' 39.098 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PIV 'L-peptide linking' . 'PIVALIC ACID' ? 'C5 H10 O2' 102.132 PO4 non-polymer . 'PHOSPHATE ION' ? 'O4 P -3' 94.971 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 3ZDA _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.32 _exptl_crystal.density_percent_sol 47 _exptl_crystal.description NONE # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.0 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details '0.2 M MAGNESIUM ACETATE, 15% (W/V) PEG-3350, pH 6.0' # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC CCD' _diffrn_detector.pdbx_collection_date 2008-12-16 _diffrn_detector.details MIRRORS # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'DOUBLE CRYSTAL' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.976 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'DIAMOND BEAMLINE I03' _diffrn_source.pdbx_synchrotron_site Diamond _diffrn_source.pdbx_synchrotron_beamline I03 _diffrn_source.pdbx_wavelength 0.976 _diffrn_source.pdbx_wavelength_list ? # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 3ZDA _reflns.observed_criterion_sigma_I 6.0 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 51.64 _reflns.d_resolution_high 1.50 _reflns.number_obs 57905 _reflns.number_all ? _reflns.percent_possible_obs 99.9 _reflns.pdbx_Rmerge_I_obs 0.10 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 22.50 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 9.9 # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 1.50 _reflns_shell.d_res_low 1.58 _reflns_shell.percent_possible_all 99.8 _reflns_shell.Rmerge_I_obs 0.48 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 3.40 _reflns_shell.pdbx_redundancy 7.0 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 3ZDA _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 54940 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F . _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 51.64 _refine.ls_d_res_high 1.50 _refine.ls_percent_reflns_obs 99.93 _refine.ls_R_factor_obs 0.21184 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.21063 _refine.ls_R_factor_R_free 0.23490 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.1 _refine.ls_number_reflns_R_free 2950 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.954 _refine.correlation_coeff_Fo_to_Fc_free 0.941 _refine.B_iso_mean 25.205 _refine.aniso_B[1][1] -0.20 _refine.aniso_B[2][2] 0.71 _refine.aniso_B[3][3] -0.51 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS.' _refine.pdbx_starting_model 'PDB ENTRY 3ZD9' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.074 _refine.pdbx_overall_ESU_R_Free 0.075 _refine.overall_SU_ML 0.051 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 1.333 _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1915 _refine_hist.pdbx_number_atoms_nucleic_acid 206 _refine_hist.pdbx_number_atoms_ligand 14 _refine_hist.number_atoms_solvent 243 _refine_hist.number_atoms_total 2378 _refine_hist.d_res_high 1.50 _refine_hist.d_res_low 51.64 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.015 0.021 ? 2199 'X-RAY DIFFRACTION' ? r_bond_other_d 0.001 0.020 ? 1407 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.547 2.079 ? 3028 'X-RAY DIFFRACTION' ? r_angle_other_deg 0.939 3.000 ? 3444 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 5.410 5.000 ? 245 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 40.619 23.908 ? 87 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 12.439 15.000 ? 322 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 14.858 15.000 ? 13 'X-RAY DIFFRACTION' ? r_chiral_restr 0.090 0.200 ? 340 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.008 0.021 ? 2291 'X-RAY DIFFRACTION' ? r_gen_planes_other 0.001 0.020 ? 403 'X-RAY DIFFRACTION' ? r_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 16.331 1.500 ? 1232 'X-RAY DIFFRACTION' ? r_mcbond_other 5.001 1.500 ? 494 'X-RAY DIFFRACTION' ? r_mcangle_it 14.774 2.000 ? 1975 'X-RAY DIFFRACTION' ? r_mcangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scbond_it 38.204 3.000 ? 967 'X-RAY DIFFRACTION' ? r_scbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scangle_it 35.483 4.500 ? 1053 'X-RAY DIFFRACTION' ? r_scangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.500 _refine_ls_shell.d_res_low 1.539 _refine_ls_shell.number_reflns_R_work 3938 _refine_ls_shell.R_factor_R_work 0.332 _refine_ls_shell.percent_reflns_obs 99.81 _refine_ls_shell.R_factor_R_free 0.336 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 219 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? # _struct.entry_id 3ZDA _struct.title 'Structure of E. coli ExoIX in complex with a fragment of the Flap1 DNA oligonucleotide, potassium and magnesium' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3ZDA _struct_keywords.pdbx_keywords HYDROLASE/DNA _struct_keywords.text 'HYDROLASE-DNA COMPLEX, FLAP ENDONUCLEASE, DNA BINDING' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 6 ? G N N 7 ? H N N 8 ? I N N 8 ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ALA A 10 ? GLY A 22 ? ALA A 10 GLY A 22 1 ? 13 HELX_P HELX_P2 2 CYS A 25 ? GLN A 41 ? CYS A 25 GLN A 41 1 ? 17 HELX_P HELX_P3 3 GLY A 57 ? LEU A 63 ? GLY A 57 LEU A 63 1 ? 7 HELX_P HELX_P4 4 PRO A 74 ? GLY A 92 ? PRO A 74 GLY A 92 1 ? 19 HELX_P HELX_P5 5 GLU A 102 ? ALA A 117 ? GLU A 102 ALA A 117 1 ? 16 HELX_P HELX_P6 6 ASP A 127 ? LEU A 134 ? ASP A 127 LEU A 134 5 ? 8 HELX_P HELX_P7 7 ASP A 150 ? GLY A 159 ? ASP A 150 GLY A 159 1 ? 10 HELX_P HELX_P8 8 GLN A 161 ? GLN A 163 ? GLN A 161 GLN A 163 5 ? 3 HELX_P HELX_P9 9 GLN A 164 ? GLY A 173 ? GLN A 164 GLY A 173 1 ? 10 HELX_P HELX_P10 10 SER A 175 ? LYS A 178 ? SER A 175 LYS A 178 5 ? 4 HELX_P HELX_P11 11 GLY A 186 ? PHE A 197 ? GLY A 186 PHE A 197 1 ? 12 HELX_P HELX_P12 12 SER A 199 ? ASN A 206 ? SER A 199 ASN A 206 1 ? 8 HELX_P HELX_P13 13 LEU A 207 ? VAL A 210 ? LEU A 207 VAL A 210 5 ? 4 HELX_P HELX_P14 14 ALA A 211 ? HIS A 221 ? ALA A 211 HIS A 221 1 ? 11 HELX_P HELX_P15 15 HIS A 221 ? ARG A 233 ? HIS A 221 ARG A 233 1 ? 13 HELX_P HELX_P16 16 ASN A 243 ? LEU A 247 ? ASN A 243 LEU A 247 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A ASP 104 OD1 ? ? ? 1_555 E MG . MG ? ? A ASP 104 A MG 1252 1_555 ? ? ? ? ? ? ? 2.089 ? ? metalc2 metalc ? ? A ASP 104 OD2 ? ? ? 1_555 E MG . MG ? ? A ASP 104 A MG 1252 1_555 ? ? ? ? ? ? ? 2.943 ? ? metalc3 metalc ? ? A LEU 171 O ? ? ? 1_555 D K . K ? ? A LEU 171 A K 1251 1_555 ? ? ? ? ? ? ? 3.251 ? ? metalc4 metalc ? ? A ALA 172 O ? ? ? 1_555 D K . K ? ? A ALA 172 A K 1251 1_555 ? ? ? ? ? ? ? 2.824 ? ? metalc5 metalc ? ? A PRO 180 O ? ? ? 1_555 D K . K ? ? A PRO 180 A K 1251 1_555 ? ? ? ? ? ? ? 2.860 ? ? metalc6 metalc ? ? A VAL 182 O ? ? ? 1_555 D K . K ? ? A VAL 182 A K 1251 1_555 ? ? ? ? ? ? ? 2.680 ? ? metalc7 metalc ? ? A ILE 185 O ? ? ? 1_555 D K . K ? ? A ILE 185 A K 1251 1_555 ? ? ? ? ? ? ? 2.555 ? ? metalc8 metalc ? ? D K . K ? ? ? 1_555 H HOH . O ? ? A K 1251 A HOH 2194 1_555 ? ? ? ? ? ? ? 2.997 ? ? metalc9 metalc ? ? D K . K ? ? ? 1_555 B DC 2 OP1 ? ? A K 1251 B DC 2 1_555 ? ? ? ? ? ? ? 3.284 ? ? metalc10 metalc ? ? E MG . MG ? ? ? 1_555 H HOH . O ? ? A MG 1252 A HOH 2017 1_555 ? ? ? ? ? ? ? 1.995 ? ? metalc11 metalc ? ? E MG . MG ? ? ? 1_555 H HOH . O ? ? A MG 1252 A HOH 2019 1_555 ? ? ? ? ? ? ? 2.378 ? ? metalc12 metalc ? ? E MG . MG ? ? ? 1_555 H HOH . O ? ? A MG 1252 A HOH 2077 1_555 ? ? ? ? ? ? ? 2.387 ? ? metalc13 metalc ? ? E MG . MG ? ? ? 1_555 H HOH . O ? ? A MG 1252 A HOH 2098 1_555 ? ? ? ? ? ? ? 2.344 ? ? metalc14 metalc ? ? E MG . MG ? ? ? 1_555 H HOH . O ? ? A MG 1252 A HOH 2240 1_555 ? ? ? ? ? ? ? 2.026 ? ? hydrog1 hydrog ? ? B DG 1 N1 ? ? ? 1_555 C DC 6 N3 ? ? B DG 1 C DC 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? B DG 1 N2 ? ? ? 1_555 C DC 6 O2 ? ? B DG 1 C DC 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? B DG 1 O6 ? ? ? 1_555 C DC 6 N4 ? ? B DG 1 C DC 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? B DC 2 N3 ? ? ? 1_555 C DG 5 N1 ? ? B DC 2 C DG 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? B DC 2 N4 ? ? ? 1_555 C DG 5 O6 ? ? B DC 2 C DG 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? B DC 2 O2 ? ? ? 1_555 C DG 5 N2 ? ? B DC 2 C DG 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? B DG 3 N1 ? ? ? 1_555 C DC 4 N3 ? ? B DG 3 C DC 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? B DG 3 N2 ? ? ? 1_555 C DC 4 O2 ? ? B DG 3 C DC 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? B DG 3 O6 ? ? ? 1_555 C DC 4 N4 ? ? B DG 3 C DC 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? B DC 4 N3 ? ? ? 1_555 C DG 3 N1 ? ? B DC 4 C DG 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? B DC 4 N4 ? ? ? 1_555 C DG 3 O6 ? ? B DC 4 C DG 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? B DC 4 O2 ? ? ? 1_555 C DG 3 N2 ? ? B DC 4 C DG 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference metalc ? ? hydrog ? ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id SER _struct_mon_prot_cis.label_seq_id 23 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id SER _struct_mon_prot_cis.auth_seq_id 23 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 24 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 24 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -1.71 # _struct_sheet.id AA _struct_sheet.type ? _struct_sheet.number_strands 6 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA 1 2 ? parallel AA 2 3 ? parallel AA 3 4 ? parallel AA 4 5 ? parallel AA 5 6 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA 1 CYS A 95 ? THR A 98 ? CYS A 95 THR A 98 AA 2 HIS A 44 ? ASP A 50 ? HIS A 44 ASP A 50 AA 3 HIS A 4 ? ASP A 9 ? HIS A 4 ASP A 9 AA 4 GLN A 120 ? VAL A 124 ? GLN A 120 VAL A 124 AA 5 LEU A 138 ? ASP A 142 ? LEU A 138 ASP A 142 AA 6 ARG A 147 ? TRP A 148 ? ARG A 147 TRP A 148 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA 1 2 N TRP A 96 ? N TRP A 96 O ALA A 47 ? O ALA A 47 AA 2 3 N HIS A 44 ? N HIS A 44 O HIS A 4 ? O HIS A 4 AA 3 4 N LEU A 5 ? N LEU A 5 O GLN A 120 ? O GLN A 120 AA 4 5 N ILE A 123 ? N ILE A 123 O ARG A 139 ? O ARG A 139 AA 5 6 N ASP A 142 ? N ASP A 142 O ARG A 147 ? O ARG A 147 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A K 1251 ? 7 'BINDING SITE FOR RESIDUE K A 1251' AC2 Software A MG 1252 ? 6 'BINDING SITE FOR RESIDUE MG A 1252' AC3 Software A PIV 1253 ? 9 'BINDING SITE FOR RESIDUE PIV A 1253' AC4 Software A PO4 1254 ? 6 'BINDING SITE FOR RESIDUE PO4 A 1254' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 7 LEU A 171 ? LEU A 171 . ? 1_555 ? 2 AC1 7 ALA A 172 ? ALA A 172 . ? 1_555 ? 3 AC1 7 PRO A 180 ? PRO A 180 . ? 1_555 ? 4 AC1 7 VAL A 182 ? VAL A 182 . ? 1_555 ? 5 AC1 7 ILE A 185 ? ILE A 185 . ? 1_555 ? 6 AC1 7 HOH H . ? HOH A 2194 . ? 1_555 ? 7 AC1 7 DC B 2 ? DC B 2 . ? 1_555 ? 8 AC2 6 ASP A 104 ? ASP A 104 . ? 1_555 ? 9 AC2 6 HOH H . ? HOH A 2017 . ? 1_555 ? 10 AC2 6 HOH H . ? HOH A 2019 . ? 1_555 ? 11 AC2 6 HOH H . ? HOH A 2077 . ? 1_555 ? 12 AC2 6 HOH H . ? HOH A 2098 . ? 1_555 ? 13 AC2 6 HOH H . ? HOH A 2240 . ? 1_555 ? 14 AC3 9 GLN A 35 ? GLN A 35 . ? 1_555 ? 15 AC3 9 LEU A 36 ? LEU A 36 . ? 1_555 ? 16 AC3 9 HIS A 39 ? HIS A 39 . ? 1_555 ? 17 AC3 9 ARG A 141 ? ARG A 141 . ? 1_555 ? 18 AC3 9 TYR A 143 ? TYR A 143 . ? 1_555 ? 19 AC3 9 LYS A 146 ? LYS A 146 . ? 1_555 ? 20 AC3 9 HOH H . ? HOH A 2056 . ? 1_555 ? 21 AC3 9 HOH H . ? HOH A 2061 . ? 1_555 ? 22 AC3 9 HOH H . ? HOH A 2125 . ? 1_554 ? 23 AC4 6 LEU A 110 ? LEU A 110 . ? 1_555 ? 24 AC4 6 LYS A 113 ? LYS A 113 . ? 1_555 ? 25 AC4 6 ILE A 240 ? ILE A 240 . ? 1_555 ? 26 AC4 6 LEU A 244 ? LEU A 244 . ? 1_555 ? 27 AC4 6 HOH H . ? HOH A 2231 . ? 1_555 ? 28 AC4 6 HOH H . ? HOH A 2241 . ? 1_555 ? # _database_PDB_matrix.entry_id 3ZDA _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3ZDA _atom_sites.fract_transf_matrix[1][1] 0.015105 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.006459 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.029008 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C K MG N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 ? ? ? A . n A 1 2 ALA 2 2 2 ALA ALA A . n A 1 3 VAL 3 3 3 VAL VAL A . n A 1 4 HIS 4 4 4 HIS HIS A . n A 1 5 LEU 5 5 5 LEU LEU A . n A 1 6 LEU 6 6 6 LEU LEU A . n A 1 7 ILE 7 7 7 ILE ILE A . n A 1 8 VAL 8 8 8 VAL VAL A . n A 1 9 ASP 9 9 9 ASP ASP A . n A 1 10 ALA 10 10 10 ALA ALA A . n A 1 11 LEU 11 11 11 LEU LEU A . n A 1 12 ASN 12 12 12 ASN ASN A . n A 1 13 LEU 13 13 13 LEU LEU A . n A 1 14 ILE 14 14 14 ILE ILE A . n A 1 15 ARG 15 15 15 ARG ARG A . n A 1 16 ARG 16 16 16 ARG ARG A . n A 1 17 ILE 17 17 17 ILE ILE A . n A 1 18 HIS 18 18 18 HIS HIS A . n A 1 19 ALA 19 19 19 ALA ALA A . n A 1 20 VAL 20 20 20 VAL VAL A . n A 1 21 GLN 21 21 21 GLN GLN A . n A 1 22 GLY 22 22 22 GLY GLY A . n A 1 23 SER 23 23 23 SER SER A . n A 1 24 PRO 24 24 24 PRO PRO A . n A 1 25 CYS 25 25 25 CYS CYS A . n A 1 26 VAL 26 26 26 VAL VAL A . n A 1 27 GLU 27 27 27 GLU GLU A . n A 1 28 THR 28 28 28 THR THR A . n A 1 29 CYS 29 29 29 CYS CYS A . n A 1 30 GLN 30 30 30 GLN GLN A . n A 1 31 HIS 31 31 31 HIS HIS A . n A 1 32 ALA 32 32 32 ALA ALA A . n A 1 33 LEU 33 33 33 LEU LEU A . n A 1 34 ASP 34 34 34 ASP ASP A . n A 1 35 GLN 35 35 35 GLN GLN A . n A 1 36 LEU 36 36 36 LEU LEU A . n A 1 37 ILE 37 37 37 ILE ILE A . n A 1 38 MET 38 38 38 MET MET A . n A 1 39 HIS 39 39 39 HIS HIS A . n A 1 40 SER 40 40 40 SER SER A . n A 1 41 GLN 41 41 41 GLN GLN A . n A 1 42 PRO 42 42 42 PRO PRO A . n A 1 43 THR 43 43 43 THR THR A . n A 1 44 HIS 44 44 44 HIS HIS A . n A 1 45 ALA 45 45 45 ALA ALA A . n A 1 46 VAL 46 46 46 VAL VAL A . n A 1 47 ALA 47 47 47 ALA ALA A . n A 1 48 VAL 48 48 48 VAL VAL A . n A 1 49 PHE 49 49 49 PHE PHE A . n A 1 50 ASP 50 50 50 ASP ASP A . n A 1 51 ASP 51 51 51 ASP ASP A . n A 1 52 GLU 52 52 ? ? ? A . n A 1 53 ASN 53 53 ? ? ? A . n A 1 54 ARG 54 54 54 ARG ARG A . n A 1 55 SER 55 55 55 SER SER A . n A 1 56 SER 56 56 56 SER SER A . n A 1 57 GLY 57 57 57 GLY GLY A . n A 1 58 TRP 58 58 58 TRP TRP A . n A 1 59 ARG 59 59 59 ARG ARG A . n A 1 60 HIS 60 60 60 HIS HIS A . n A 1 61 GLN 61 61 61 GLN GLN A . n A 1 62 ARG 62 62 62 ARG ARG A . n A 1 63 LEU 63 63 63 LEU LEU A . n A 1 64 PRO 64 64 64 PRO PRO A . n A 1 65 ASP 65 65 65 ASP ASP A . n A 1 66 TYR 66 66 66 TYR TYR A . n A 1 67 LYS 67 67 67 LYS LYS A . n A 1 68 ALA 68 68 68 ALA ALA A . n A 1 69 GLY 69 69 69 GLY GLY A . n A 1 70 ARG 70 70 70 ARG ARG A . n A 1 71 PRO 71 71 71 PRO PRO A . n A 1 72 PRO 72 72 72 PRO PRO A . n A 1 73 MET 73 73 73 MET MET A . n A 1 74 PRO 74 74 74 PRO PRO A . n A 1 75 GLU 75 75 75 GLU GLU A . n A 1 76 GLU 76 76 76 GLU GLU A . n A 1 77 LEU 77 77 77 LEU LEU A . n A 1 78 HIS 78 78 78 HIS HIS A . n A 1 79 ASP 79 79 79 ASP ASP A . n A 1 80 GLU 80 80 80 GLU GLU A . n A 1 81 MET 81 81 81 MET MET A . n A 1 82 PRO 82 82 82 PRO PRO A . n A 1 83 ALA 83 83 83 ALA ALA A . n A 1 84 LEU 84 84 84 LEU LEU A . n A 1 85 ARG 85 85 85 ARG ARG A . n A 1 86 ALA 86 86 86 ALA ALA A . n A 1 87 ALA 87 87 87 ALA ALA A . n A 1 88 PHE 88 88 88 PHE PHE A . n A 1 89 GLU 89 89 89 GLU GLU A . n A 1 90 GLN 90 90 90 GLN GLN A . n A 1 91 ARG 91 91 91 ARG ARG A . n A 1 92 GLY 92 92 92 GLY GLY A . n A 1 93 VAL 93 93 93 VAL VAL A . n A 1 94 PRO 94 94 94 PRO PRO A . n A 1 95 CYS 95 95 95 CYS CYS A . n A 1 96 TRP 96 96 96 TRP TRP A . n A 1 97 SER 97 97 97 SER SER A . n A 1 98 THR 98 98 98 THR THR A . n A 1 99 SER 99 99 99 SER SER A . n A 1 100 GLY 100 100 100 GLY GLY A . n A 1 101 ASN 101 101 101 ASN ASN A . n A 1 102 GLU 102 102 102 GLU GLU A . n A 1 103 ALA 103 103 103 ALA ALA A . n A 1 104 ASP 104 104 104 ASP ASP A . n A 1 105 ASP 105 105 105 ASP ASP A . n A 1 106 LEU 106 106 106 LEU LEU A . n A 1 107 ALA 107 107 107 ALA ALA A . n A 1 108 ALA 108 108 108 ALA ALA A . n A 1 109 THR 109 109 109 THR THR A . n A 1 110 LEU 110 110 110 LEU LEU A . n A 1 111 ALA 111 111 111 ALA ALA A . n A 1 112 VAL 112 112 112 VAL VAL A . n A 1 113 LYS 113 113 113 LYS LYS A . n A 1 114 VAL 114 114 114 VAL VAL A . n A 1 115 THR 115 115 115 THR THR A . n A 1 116 GLN 116 116 116 GLN GLN A . n A 1 117 ALA 117 117 117 ALA ALA A . n A 1 118 GLY 118 118 118 GLY GLY A . n A 1 119 HIS 119 119 119 HIS HIS A . n A 1 120 GLN 120 120 120 GLN GLN A . n A 1 121 ALA 121 121 121 ALA ALA A . n A 1 122 THR 122 122 122 THR THR A . n A 1 123 ILE 123 123 123 ILE ILE A . n A 1 124 VAL 124 124 124 VAL VAL A . n A 1 125 SER 125 125 125 SER SER A . n A 1 126 THR 126 126 126 THR THR A . n A 1 127 ASP 127 127 127 ASP ASP A . n A 1 128 LYS 128 128 128 LYS LYS A . n A 1 129 GLY 129 129 129 GLY GLY A . n A 1 130 TYR 130 130 130 TYR TYR A . n A 1 131 CYS 131 131 131 CYS CYS A . n A 1 132 GLN 132 132 132 GLN GLN A . n A 1 133 LEU 133 133 133 LEU LEU A . n A 1 134 LEU 134 134 134 LEU LEU A . n A 1 135 SER 135 135 135 SER SER A . n A 1 136 PRO 136 136 136 PRO PRO A . n A 1 137 THR 137 137 137 THR THR A . n A 1 138 LEU 138 138 138 LEU LEU A . n A 1 139 ARG 139 139 139 ARG ARG A . n A 1 140 ILE 140 140 140 ILE ILE A . n A 1 141 ARG 141 141 141 ARG ARG A . n A 1 142 ASP 142 142 142 ASP ASP A . n A 1 143 TYR 143 143 143 TYR TYR A . n A 1 144 PHE 144 144 144 PHE PHE A . n A 1 145 GLN 145 145 145 GLN GLN A . n A 1 146 LYS 146 146 146 LYS LYS A . n A 1 147 ARG 147 147 147 ARG ARG A . n A 1 148 TRP 148 148 148 TRP TRP A . n A 1 149 LEU 149 149 149 LEU LEU A . n A 1 150 ASP 150 150 150 ASP ASP A . n A 1 151 ALA 151 151 151 ALA ALA A . n A 1 152 PRO 152 152 152 PRO PRO A . n A 1 153 PHE 153 153 153 PHE PHE A . n A 1 154 ILE 154 154 154 ILE ILE A . n A 1 155 ASP 155 155 155 ASP ASP A . n A 1 156 LYS 156 156 156 LYS LYS A . n A 1 157 GLU 157 157 157 GLU GLU A . n A 1 158 PHE 158 158 158 PHE PHE A . n A 1 159 GLY 159 159 159 GLY GLY A . n A 1 160 VAL 160 160 160 VAL VAL A . n A 1 161 GLN 161 161 161 GLN GLN A . n A 1 162 PRO 162 162 162 PRO PRO A . n A 1 163 GLN 163 163 163 GLN GLN A . n A 1 164 GLN 164 164 164 GLN GLN A . n A 1 165 LEU 165 165 165 LEU LEU A . n A 1 166 PRO 166 166 166 PRO PRO A . n A 1 167 ASP 167 167 167 ASP ASP A . n A 1 168 TYR 168 168 168 TYR TYR A . n A 1 169 TRP 169 169 169 TRP TRP A . n A 1 170 GLY 170 170 170 GLY GLY A . n A 1 171 LEU 171 171 171 LEU LEU A . n A 1 172 ALA 172 172 172 ALA ALA A . n A 1 173 GLY 173 173 173 GLY GLY A . n A 1 174 ILE 174 174 174 ILE ILE A . n A 1 175 SER 175 175 175 SER SER A . n A 1 176 SER 176 176 176 SER SER A . n A 1 177 SER 177 177 177 SER SER A . n A 1 178 LYS 178 178 178 LYS LYS A . n A 1 179 VAL 179 179 179 VAL VAL A . n A 1 180 PRO 180 180 180 PRO PRO A . n A 1 181 GLY 181 181 181 GLY GLY A . n A 1 182 VAL 182 182 182 VAL VAL A . n A 1 183 ALA 183 183 183 ALA ALA A . n A 1 184 GLY 184 184 184 GLY GLY A . n A 1 185 ILE 185 185 185 ILE ILE A . n A 1 186 GLY 186 186 186 GLY GLY A . n A 1 187 PRO 187 187 187 PRO PRO A . n A 1 188 LYS 188 188 188 LYS LYS A . n A 1 189 SER 189 189 189 SER SER A . n A 1 190 ALA 190 190 190 ALA ALA A . n A 1 191 THR 191 191 191 THR THR A . n A 1 192 GLN 192 192 192 GLN GLN A . n A 1 193 LEU 193 193 193 LEU LEU A . n A 1 194 LEU 194 194 194 LEU LEU A . n A 1 195 VAL 195 195 195 VAL VAL A . n A 1 196 GLU 196 196 196 GLU GLU A . n A 1 197 PHE 197 197 197 PHE PHE A . n A 1 198 GLN 198 198 198 GLN GLN A . n A 1 199 SER 199 199 199 SER SER A . n A 1 200 LEU 200 200 200 LEU LEU A . n A 1 201 GLU 201 201 201 GLU GLU A . n A 1 202 GLY 202 202 202 GLY GLY A . n A 1 203 ILE 203 203 203 ILE ILE A . n A 1 204 TYR 204 204 204 TYR TYR A . n A 1 205 GLU 205 205 205 GLU GLU A . n A 1 206 ASN 206 206 206 ASN ASN A . n A 1 207 LEU 207 207 207 LEU LEU A . n A 1 208 ASP 208 208 208 ASP ASP A . n A 1 209 ALA 209 209 209 ALA ALA A . n A 1 210 VAL 210 210 210 VAL VAL A . n A 1 211 ALA 211 211 211 ALA ALA A . n A 1 212 GLU 212 212 212 GLU GLU A . n A 1 213 LYS 213 213 213 LYS LYS A . n A 1 214 TRP 214 214 214 TRP TRP A . n A 1 215 ARG 215 215 215 ARG ARG A . n A 1 216 LYS 216 216 216 LYS LYS A . n A 1 217 LYS 217 217 217 LYS LYS A . n A 1 218 LEU 218 218 218 LEU LEU A . n A 1 219 GLU 219 219 219 GLU GLU A . n A 1 220 THR 220 220 220 THR THR A . n A 1 221 HIS 221 221 221 HIS HIS A . n A 1 222 LYS 222 222 222 LYS LYS A . n A 1 223 GLU 223 223 223 GLU GLU A . n A 1 224 MET 224 224 224 MET MET A . n A 1 225 ALA 225 225 225 ALA ALA A . n A 1 226 PHE 226 226 226 PHE PHE A . n A 1 227 LEU 227 227 227 LEU LEU A . n A 1 228 CYS 228 228 228 CYS CYS A . n A 1 229 ARG 229 229 229 ARG ARG A . n A 1 230 ASP 230 230 230 ASP ASP A . n A 1 231 ILE 231 231 231 ILE ILE A . n A 1 232 ALA 232 232 232 ALA ALA A . n A 1 233 ARG 233 233 233 ARG ARG A . n A 1 234 LEU 234 234 234 LEU LEU A . n A 1 235 GLN 235 235 235 GLN GLN A . n A 1 236 THR 236 236 236 THR THR A . n A 1 237 ASP 237 237 237 ASP ASP A . n A 1 238 LEU 238 238 238 LEU LEU A . n A 1 239 HIS 239 239 239 HIS HIS A . n A 1 240 ILE 240 240 240 ILE ILE A . n A 1 241 ASP 241 241 241 ASP ASP A . n A 1 242 GLY 242 242 242 GLY GLY A . n A 1 243 ASN 243 243 243 ASN ASN A . n A 1 244 LEU 244 244 244 LEU LEU A . n A 1 245 GLN 245 245 245 GLN GLN A . n A 1 246 GLN 246 246 246 GLN GLN A . n A 1 247 LEU 247 247 247 LEU LEU A . n A 1 248 ARG 248 248 248 ARG ARG A . n A 1 249 LEU 249 249 249 LEU LEU A . n A 1 250 VAL 250 250 250 VAL VAL A . n A 1 251 ARG 251 251 ? ? ? A . n B 2 1 DG 1 1 1 DG DG B . n B 2 2 DC 2 2 2 DC DC B . n B 2 3 DG 3 3 3 DG DG B . n B 2 4 DC 4 4 4 DC DC B . n C 3 1 DA 1 11 11 DA DA C . n C 3 2 DA 2 12 12 DA DA C . n C 3 3 DG 3 13 13 DG DG C . n C 3 4 DC 4 14 14 DC DC C . n C 3 5 DG 5 15 15 DG DG C . n C 3 6 DC 6 16 16 DC DC C . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 K 1 1251 1251 K K A . E 5 MG 1 1252 1252 MG MG A . F 6 PIV 1 1253 1253 PIV PIV A . G 7 PO4 1 1254 1254 PO4 PO4 A . H 8 HOH 1 2001 2001 HOH HOH A . H 8 HOH 2 2002 2002 HOH HOH A . H 8 HOH 3 2003 2003 HOH HOH A . H 8 HOH 4 2004 2004 HOH HOH A . H 8 HOH 5 2005 2005 HOH HOH A . H 8 HOH 6 2006 2006 HOH HOH A . H 8 HOH 7 2007 2007 HOH HOH A . H 8 HOH 8 2008 2008 HOH HOH A . H 8 HOH 9 2009 2009 HOH HOH A . H 8 HOH 10 2010 2010 HOH HOH A . H 8 HOH 11 2011 2011 HOH HOH A . H 8 HOH 12 2012 2012 HOH HOH A . H 8 HOH 13 2013 2013 HOH HOH A . H 8 HOH 14 2014 2014 HOH HOH A . H 8 HOH 15 2015 2015 HOH HOH A . H 8 HOH 16 2016 2016 HOH HOH A . H 8 HOH 17 2017 2017 HOH HOH A . H 8 HOH 18 2018 2018 HOH HOH A . H 8 HOH 19 2019 2019 HOH HOH A . H 8 HOH 20 2020 2020 HOH HOH A . H 8 HOH 21 2021 2021 HOH HOH A . H 8 HOH 22 2022 2022 HOH HOH A . H 8 HOH 23 2023 2023 HOH HOH A . H 8 HOH 24 2024 2024 HOH HOH A . H 8 HOH 25 2025 2025 HOH HOH A . H 8 HOH 26 2026 2026 HOH HOH A . H 8 HOH 27 2027 2027 HOH HOH A . H 8 HOH 28 2028 2028 HOH HOH A . H 8 HOH 29 2029 2029 HOH HOH A . H 8 HOH 30 2030 2030 HOH HOH A . H 8 HOH 31 2031 2031 HOH HOH A . H 8 HOH 32 2032 2032 HOH HOH A . H 8 HOH 33 2033 2033 HOH HOH A . H 8 HOH 34 2034 2034 HOH HOH A . H 8 HOH 35 2035 2035 HOH HOH A . H 8 HOH 36 2036 2036 HOH HOH A . H 8 HOH 37 2037 2037 HOH HOH A . H 8 HOH 38 2038 2038 HOH HOH A . H 8 HOH 39 2039 2039 HOH HOH A . H 8 HOH 40 2040 2040 HOH HOH A . H 8 HOH 41 2041 2041 HOH HOH A . H 8 HOH 42 2042 2042 HOH HOH A . H 8 HOH 43 2043 2043 HOH HOH A . H 8 HOH 44 2044 2044 HOH HOH A . H 8 HOH 45 2045 2045 HOH HOH A . H 8 HOH 46 2046 2046 HOH HOH A . H 8 HOH 47 2047 2047 HOH HOH A . H 8 HOH 48 2048 2048 HOH HOH A . H 8 HOH 49 2049 2049 HOH HOH A . H 8 HOH 50 2050 2050 HOH HOH A . H 8 HOH 51 2051 2051 HOH HOH A . H 8 HOH 52 2052 2052 HOH HOH A . H 8 HOH 53 2053 2053 HOH HOH A . H 8 HOH 54 2054 2054 HOH HOH A . H 8 HOH 55 2055 2055 HOH HOH A . H 8 HOH 56 2056 2056 HOH HOH A . H 8 HOH 57 2057 2057 HOH HOH A . H 8 HOH 58 2058 2058 HOH HOH A . H 8 HOH 59 2059 2059 HOH HOH A . H 8 HOH 60 2060 2060 HOH HOH A . H 8 HOH 61 2061 2061 HOH HOH A . H 8 HOH 62 2062 2062 HOH HOH A . H 8 HOH 63 2063 2063 HOH HOH A . H 8 HOH 64 2064 2064 HOH HOH A . H 8 HOH 65 2065 2065 HOH HOH A . H 8 HOH 66 2066 2066 HOH HOH A . H 8 HOH 67 2067 2067 HOH HOH A . H 8 HOH 68 2068 2068 HOH HOH A . H 8 HOH 69 2069 2069 HOH HOH A . H 8 HOH 70 2070 2070 HOH HOH A . H 8 HOH 71 2071 2071 HOH HOH A . H 8 HOH 72 2072 2072 HOH HOH A . H 8 HOH 73 2073 2073 HOH HOH A . H 8 HOH 74 2074 2074 HOH HOH A . H 8 HOH 75 2075 2075 HOH HOH A . H 8 HOH 76 2076 2076 HOH HOH A . H 8 HOH 77 2077 2077 HOH HOH A . H 8 HOH 78 2078 2078 HOH HOH A . H 8 HOH 79 2079 2079 HOH HOH A . H 8 HOH 80 2080 2080 HOH HOH A . H 8 HOH 81 2081 2081 HOH HOH A . H 8 HOH 82 2082 2082 HOH HOH A . H 8 HOH 83 2083 2083 HOH HOH A . H 8 HOH 84 2084 2084 HOH HOH A . H 8 HOH 85 2085 2085 HOH HOH A . H 8 HOH 86 2086 2086 HOH HOH A . H 8 HOH 87 2087 2087 HOH HOH A . H 8 HOH 88 2088 2088 HOH HOH A . H 8 HOH 89 2089 2089 HOH HOH A . H 8 HOH 90 2090 2090 HOH HOH A . H 8 HOH 91 2091 2091 HOH HOH A . H 8 HOH 92 2092 2092 HOH HOH A . H 8 HOH 93 2093 2093 HOH HOH A . H 8 HOH 94 2094 2094 HOH HOH A . H 8 HOH 95 2095 2095 HOH HOH A . H 8 HOH 96 2096 2096 HOH HOH A . H 8 HOH 97 2097 2097 HOH HOH A . H 8 HOH 98 2098 2098 HOH HOH A . H 8 HOH 99 2099 2099 HOH HOH A . H 8 HOH 100 2100 2100 HOH HOH A . H 8 HOH 101 2101 2101 HOH HOH A . H 8 HOH 102 2102 2102 HOH HOH A . H 8 HOH 103 2103 2103 HOH HOH A . H 8 HOH 104 2104 2104 HOH HOH A . H 8 HOH 105 2105 2105 HOH HOH A . H 8 HOH 106 2106 2106 HOH HOH A . H 8 HOH 107 2107 2107 HOH HOH A . H 8 HOH 108 2108 2108 HOH HOH A . H 8 HOH 109 2109 2109 HOH HOH A . H 8 HOH 110 2110 2110 HOH HOH A . H 8 HOH 111 2111 2111 HOH HOH A . H 8 HOH 112 2112 2112 HOH HOH A . H 8 HOH 113 2113 2113 HOH HOH A . H 8 HOH 114 2114 2114 HOH HOH A . H 8 HOH 115 2115 2115 HOH HOH A . H 8 HOH 116 2116 2116 HOH HOH A . H 8 HOH 117 2117 2117 HOH HOH A . H 8 HOH 118 2118 2118 HOH HOH A . H 8 HOH 119 2119 2119 HOH HOH A . H 8 HOH 120 2120 2120 HOH HOH A . H 8 HOH 121 2121 2121 HOH HOH A . H 8 HOH 122 2122 2122 HOH HOH A . H 8 HOH 123 2123 2123 HOH HOH A . H 8 HOH 124 2124 2124 HOH HOH A . H 8 HOH 125 2125 2125 HOH HOH A . H 8 HOH 126 2126 2126 HOH HOH A . H 8 HOH 127 2127 2127 HOH HOH A . H 8 HOH 128 2128 2128 HOH HOH A . H 8 HOH 129 2129 2129 HOH HOH A . H 8 HOH 130 2130 2130 HOH HOH A . H 8 HOH 131 2131 2131 HOH HOH A . H 8 HOH 132 2132 2132 HOH HOH A . H 8 HOH 133 2133 2133 HOH HOH A . H 8 HOH 134 2134 2134 HOH HOH A . H 8 HOH 135 2135 2135 HOH HOH A . H 8 HOH 136 2136 2136 HOH HOH A . H 8 HOH 137 2137 2137 HOH HOH A . H 8 HOH 138 2138 2138 HOH HOH A . H 8 HOH 139 2139 2139 HOH HOH A . H 8 HOH 140 2140 2140 HOH HOH A . H 8 HOH 141 2141 2141 HOH HOH A . H 8 HOH 142 2142 2142 HOH HOH A . H 8 HOH 143 2143 2143 HOH HOH A . H 8 HOH 144 2144 2144 HOH HOH A . H 8 HOH 145 2145 2145 HOH HOH A . H 8 HOH 146 2146 2146 HOH HOH A . H 8 HOH 147 2147 2147 HOH HOH A . H 8 HOH 148 2148 2148 HOH HOH A . H 8 HOH 149 2149 2149 HOH HOH A . H 8 HOH 150 2150 2150 HOH HOH A . H 8 HOH 151 2151 2151 HOH HOH A . H 8 HOH 152 2152 2152 HOH HOH A . H 8 HOH 153 2153 2153 HOH HOH A . H 8 HOH 154 2154 2154 HOH HOH A . H 8 HOH 155 2155 2155 HOH HOH A . H 8 HOH 156 2156 2156 HOH HOH A . H 8 HOH 157 2157 2157 HOH HOH A . H 8 HOH 158 2158 2158 HOH HOH A . H 8 HOH 159 2159 2159 HOH HOH A . H 8 HOH 160 2160 2160 HOH HOH A . H 8 HOH 161 2161 2161 HOH HOH A . H 8 HOH 162 2162 2162 HOH HOH A . H 8 HOH 163 2163 2163 HOH HOH A . H 8 HOH 164 2164 2164 HOH HOH A . H 8 HOH 165 2165 2165 HOH HOH A . H 8 HOH 166 2166 2166 HOH HOH A . H 8 HOH 167 2167 2167 HOH HOH A . H 8 HOH 168 2168 2168 HOH HOH A . H 8 HOH 169 2169 2169 HOH HOH A . H 8 HOH 170 2170 2170 HOH HOH A . H 8 HOH 171 2171 2171 HOH HOH A . H 8 HOH 172 2172 2172 HOH HOH A . H 8 HOH 173 2173 2173 HOH HOH A . H 8 HOH 174 2174 2174 HOH HOH A . H 8 HOH 175 2175 2175 HOH HOH A . H 8 HOH 176 2176 2176 HOH HOH A . H 8 HOH 177 2177 2177 HOH HOH A . H 8 HOH 178 2178 2178 HOH HOH A . H 8 HOH 179 2179 2179 HOH HOH A . H 8 HOH 180 2180 2180 HOH HOH A . H 8 HOH 181 2181 2181 HOH HOH A . H 8 HOH 182 2182 2182 HOH HOH A . H 8 HOH 183 2183 2183 HOH HOH A . H 8 HOH 184 2184 2184 HOH HOH A . H 8 HOH 185 2185 2185 HOH HOH A . H 8 HOH 186 2186 2186 HOH HOH A . H 8 HOH 187 2187 2187 HOH HOH A . H 8 HOH 188 2188 2188 HOH HOH A . H 8 HOH 189 2189 2189 HOH HOH A . H 8 HOH 190 2190 2190 HOH HOH A . H 8 HOH 191 2191 2191 HOH HOH A . H 8 HOH 192 2192 2192 HOH HOH A . H 8 HOH 193 2193 2193 HOH HOH A . H 8 HOH 194 2194 2194 HOH HOH A . H 8 HOH 195 2195 2195 HOH HOH A . H 8 HOH 196 2196 2196 HOH HOH A . H 8 HOH 197 2197 2197 HOH HOH A . H 8 HOH 198 2198 2198 HOH HOH A . H 8 HOH 199 2199 2199 HOH HOH A . H 8 HOH 200 2200 2200 HOH HOH A . H 8 HOH 201 2201 2201 HOH HOH A . H 8 HOH 202 2202 2202 HOH HOH A . H 8 HOH 203 2203 2203 HOH HOH A . H 8 HOH 204 2204 2204 HOH HOH A . H 8 HOH 205 2205 2205 HOH HOH A . H 8 HOH 206 2206 2206 HOH HOH A . H 8 HOH 207 2207 2207 HOH HOH A . H 8 HOH 208 2208 2208 HOH HOH A . H 8 HOH 209 2209 2209 HOH HOH A . H 8 HOH 210 2210 2210 HOH HOH A . H 8 HOH 211 2211 2211 HOH HOH A . H 8 HOH 212 2212 2212 HOH HOH A . H 8 HOH 213 2213 2213 HOH HOH A . H 8 HOH 214 2214 2214 HOH HOH A . H 8 HOH 215 2215 2215 HOH HOH A . H 8 HOH 216 2216 2216 HOH HOH A . H 8 HOH 217 2217 2217 HOH HOH A . H 8 HOH 218 2218 2218 HOH HOH A . H 8 HOH 219 2219 2219 HOH HOH A . H 8 HOH 220 2220 2220 HOH HOH A . H 8 HOH 221 2221 2221 HOH HOH A . H 8 HOH 222 2222 2222 HOH HOH A . H 8 HOH 223 2223 2223 HOH HOH A . H 8 HOH 224 2224 2224 HOH HOH A . H 8 HOH 225 2225 2225 HOH HOH A . H 8 HOH 226 2226 2226 HOH HOH A . H 8 HOH 227 2227 2227 HOH HOH A . H 8 HOH 228 2228 2228 HOH HOH A . H 8 HOH 229 2229 2229 HOH HOH A . H 8 HOH 230 2230 2230 HOH HOH A . H 8 HOH 231 2231 2231 HOH HOH A . H 8 HOH 232 2232 2232 HOH HOH A . H 8 HOH 233 2233 2233 HOH HOH A . H 8 HOH 234 2234 2234 HOH HOH A . H 8 HOH 235 2235 2235 HOH HOH A . H 8 HOH 236 2236 2236 HOH HOH A . H 8 HOH 237 2237 2237 HOH HOH A . H 8 HOH 238 2238 2238 HOH HOH A . H 8 HOH 239 2239 2239 HOH HOH A . H 8 HOH 240 2240 2240 HOH HOH A . H 8 HOH 241 2241 2241 HOH HOH A . I 8 HOH 1 2001 2001 HOH HOH B . I 8 HOH 2 2002 2002 HOH HOH B . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 1500 ? 1 MORE -25.4 ? 1 'SSA (A^2)' 14250 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OD1 ? A ASP 104 ? A ASP 104 ? 1_555 MG ? E MG . ? A MG 1252 ? 1_555 OD2 ? A ASP 104 ? A ASP 104 ? 1_555 49.0 ? 2 OD1 ? A ASP 104 ? A ASP 104 ? 1_555 MG ? E MG . ? A MG 1252 ? 1_555 O ? H HOH . ? A HOH 2017 ? 1_555 81.8 ? 3 OD2 ? A ASP 104 ? A ASP 104 ? 1_555 MG ? E MG . ? A MG 1252 ? 1_555 O ? H HOH . ? A HOH 2017 ? 1_555 97.5 ? 4 OD1 ? A ASP 104 ? A ASP 104 ? 1_555 MG ? E MG . ? A MG 1252 ? 1_555 O ? H HOH . ? A HOH 2019 ? 1_555 98.4 ? 5 OD2 ? A ASP 104 ? A ASP 104 ? 1_555 MG ? E MG . ? A MG 1252 ? 1_555 O ? H HOH . ? A HOH 2019 ? 1_555 54.6 ? 6 O ? H HOH . ? A HOH 2017 ? 1_555 MG ? E MG . ? A MG 1252 ? 1_555 O ? H HOH . ? A HOH 2019 ? 1_555 83.8 ? 7 OD1 ? A ASP 104 ? A ASP 104 ? 1_555 MG ? E MG . ? A MG 1252 ? 1_555 O ? H HOH . ? A HOH 2077 ? 1_555 90.3 ? 8 OD2 ? A ASP 104 ? A ASP 104 ? 1_555 MG ? E MG . ? A MG 1252 ? 1_555 O ? H HOH . ? A HOH 2077 ? 1_555 139.2 ? 9 O ? H HOH . ? A HOH 2017 ? 1_555 MG ? E MG . ? A MG 1252 ? 1_555 O ? H HOH . ? A HOH 2077 ? 1_555 74.8 ? 10 O ? H HOH . ? A HOH 2019 ? 1_555 MG ? E MG . ? A MG 1252 ? 1_555 O ? H HOH . ? A HOH 2077 ? 1_555 155.5 ? 11 OD1 ? A ASP 104 ? A ASP 104 ? 1_555 MG ? E MG . ? A MG 1252 ? 1_555 O ? H HOH . ? A HOH 2098 ? 1_555 85.6 ? 12 OD2 ? A ASP 104 ? A ASP 104 ? 1_555 MG ? E MG . ? A MG 1252 ? 1_555 O ? H HOH . ? A HOH 2098 ? 1_555 66.4 ? 13 O ? H HOH . ? A HOH 2017 ? 1_555 MG ? E MG . ? A MG 1252 ? 1_555 O ? H HOH . ? A HOH 2098 ? 1_555 163.8 ? 14 O ? H HOH . ? A HOH 2019 ? 1_555 MG ? E MG . ? A MG 1252 ? 1_555 O ? H HOH . ? A HOH 2098 ? 1_555 88.1 ? 15 O ? H HOH . ? A HOH 2077 ? 1_555 MG ? E MG . ? A MG 1252 ? 1_555 O ? H HOH . ? A HOH 2098 ? 1_555 115.5 ? 16 OD1 ? A ASP 104 ? A ASP 104 ? 1_555 MG ? E MG . ? A MG 1252 ? 1_555 O ? H HOH . ? A HOH 2240 ? 1_555 171.7 ? 17 OD2 ? A ASP 104 ? A ASP 104 ? 1_555 MG ? E MG . ? A MG 1252 ? 1_555 O ? H HOH . ? A HOH 2240 ? 1_555 123.3 ? 18 O ? H HOH . ? A HOH 2017 ? 1_555 MG ? E MG . ? A MG 1252 ? 1_555 O ? H HOH . ? A HOH 2240 ? 1_555 97.6 ? 19 O ? H HOH . ? A HOH 2019 ? 1_555 MG ? E MG . ? A MG 1252 ? 1_555 O ? H HOH . ? A HOH 2240 ? 1_555 73.3 ? 20 O ? H HOH . ? A HOH 2077 ? 1_555 MG ? E MG . ? A MG 1252 ? 1_555 O ? H HOH . ? A HOH 2240 ? 1_555 97.5 ? 21 O ? H HOH . ? A HOH 2098 ? 1_555 MG ? E MG . ? A MG 1252 ? 1_555 O ? H HOH . ? A HOH 2240 ? 1_555 93.4 ? 22 O ? A LEU 171 ? A LEU 171 ? 1_555 K ? D K . ? A K 1251 ? 1_555 O ? A ALA 172 ? A ALA 172 ? 1_555 76.4 ? 23 O ? A LEU 171 ? A LEU 171 ? 1_555 K ? D K . ? A K 1251 ? 1_555 O ? A PRO 180 ? A PRO 180 ? 1_555 89.4 ? 24 O ? A ALA 172 ? A ALA 172 ? 1_555 K ? D K . ? A K 1251 ? 1_555 O ? A PRO 180 ? A PRO 180 ? 1_555 85.9 ? 25 O ? A LEU 171 ? A LEU 171 ? 1_555 K ? D K . ? A K 1251 ? 1_555 O ? A VAL 182 ? A VAL 182 ? 1_555 73.7 ? 26 O ? A ALA 172 ? A ALA 172 ? 1_555 K ? D K . ? A K 1251 ? 1_555 O ? A VAL 182 ? A VAL 182 ? 1_555 149.6 ? 27 O ? A PRO 180 ? A PRO 180 ? 1_555 K ? D K . ? A K 1251 ? 1_555 O ? A VAL 182 ? A VAL 182 ? 1_555 99.4 ? 28 O ? A LEU 171 ? A LEU 171 ? 1_555 K ? D K . ? A K 1251 ? 1_555 O ? A ILE 185 ? A ILE 185 ? 1_555 73.8 ? 29 O ? A ALA 172 ? A ALA 172 ? 1_555 K ? D K . ? A K 1251 ? 1_555 O ? A ILE 185 ? A ILE 185 ? 1_555 88.3 ? 30 O ? A PRO 180 ? A PRO 180 ? 1_555 K ? D K . ? A K 1251 ? 1_555 O ? A ILE 185 ? A ILE 185 ? 1_555 163.1 ? 31 O ? A VAL 182 ? A VAL 182 ? 1_555 K ? D K . ? A K 1251 ? 1_555 O ? A ILE 185 ? A ILE 185 ? 1_555 78.0 ? 32 O ? A LEU 171 ? A LEU 171 ? 1_555 K ? D K . ? A K 1251 ? 1_555 O ? H HOH . ? A HOH 2194 ? 1_555 144.5 ? 33 O ? A ALA 172 ? A ALA 172 ? 1_555 K ? D K . ? A K 1251 ? 1_555 O ? H HOH . ? A HOH 2194 ? 1_555 86.4 ? 34 O ? A PRO 180 ? A PRO 180 ? 1_555 K ? D K . ? A K 1251 ? 1_555 O ? H HOH . ? A HOH 2194 ? 1_555 58.2 ? 35 O ? A VAL 182 ? A VAL 182 ? 1_555 K ? D K . ? A K 1251 ? 1_555 O ? H HOH . ? A HOH 2194 ? 1_555 122.0 ? 36 O ? A ILE 185 ? A ILE 185 ? 1_555 K ? D K . ? A K 1251 ? 1_555 O ? H HOH . ? A HOH 2194 ? 1_555 137.2 ? 37 O ? A LEU 171 ? A LEU 171 ? 1_555 K ? D K . ? A K 1251 ? 1_555 OP1 ? B DC 2 ? B DC 2 ? 1_555 147.4 ? 38 O ? A ALA 172 ? A ALA 172 ? 1_555 K ? D K . ? A K 1251 ? 1_555 OP1 ? B DC 2 ? B DC 2 ? 1_555 127.8 ? 39 O ? A PRO 180 ? A PRO 180 ? 1_555 K ? D K . ? A K 1251 ? 1_555 OP1 ? B DC 2 ? B DC 2 ? 1_555 111.5 ? 40 O ? A VAL 182 ? A VAL 182 ? 1_555 K ? D K . ? A K 1251 ? 1_555 OP1 ? B DC 2 ? B DC 2 ? 1_555 78.2 ? 41 O ? A ILE 185 ? A ILE 185 ? 1_555 K ? D K . ? A K 1251 ? 1_555 OP1 ? B DC 2 ? B DC 2 ? 1_555 84.5 ? 42 O ? H HOH . ? A HOH 2194 ? 1_555 K ? D K . ? A K 1251 ? 1_555 OP1 ? B DC 2 ? B DC 2 ? 1_555 66.2 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2013-07-10 2 'Structure model' 1 1 2013-07-17 3 'Structure model' 1 2 2013-10-09 4 'Structure model' 1 3 2019-10-30 5 'Structure model' 1 4 2023-12-20 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Database references' 3 4 'Structure model' Advisory 4 4 'Structure model' 'Data collection' 5 4 'Structure model' 'Derived calculations' 6 4 'Structure model' Other 7 5 'Structure model' 'Data collection' 8 5 'Structure model' 'Database references' 9 5 'Structure model' 'Derived calculations' 10 5 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' pdbx_database_status 2 4 'Structure model' pdbx_struct_conn_angle 3 4 'Structure model' pdbx_validate_symm_contact 4 4 'Structure model' struct_conn 5 4 'Structure model' struct_conn_type 6 5 'Structure model' chem_comp_atom 7 5 'Structure model' chem_comp_bond 8 5 'Structure model' database_2 9 5 'Structure model' pdbx_initial_refinement_model 10 5 'Structure model' pdbx_struct_conn_angle 11 5 'Structure model' struct_conn 12 5 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_pdbx_database_status.status_code_sf' 2 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_asym_id' 3 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 4 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 5 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 6 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 7 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 8 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 9 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_comp_id' 10 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_seq_id' 11 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_asym_id' 12 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_atom_id' 13 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_comp_id' 14 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_asym_id' 15 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 16 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 17 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 18 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 19 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 20 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 21 4 'Structure model' '_pdbx_struct_conn_angle.value' 22 5 'Structure model' '_database_2.pdbx_DOI' 23 5 'Structure model' '_database_2.pdbx_database_accession' 24 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_asym_id' 25 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 26 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 27 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 28 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 29 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 30 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 31 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_asym_id' 32 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 33 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 34 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 35 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 36 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 37 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 38 5 'Structure model' '_pdbx_struct_conn_angle.value' 39 5 'Structure model' '_struct_conn.pdbx_dist_value' 40 5 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 41 5 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 42 5 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 43 5 'Structure model' '_struct_conn.ptnr1_label_asym_id' 44 5 'Structure model' '_struct_conn.ptnr1_label_atom_id' 45 5 'Structure model' '_struct_conn.ptnr1_label_comp_id' 46 5 'Structure model' '_struct_conn.ptnr1_label_seq_id' 47 5 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 48 5 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 49 5 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 50 5 'Structure model' '_struct_conn.ptnr2_label_asym_id' 51 5 'Structure model' '_struct_conn.ptnr2_label_atom_id' 52 5 'Structure model' '_struct_conn.ptnr2_label_comp_id' 53 5 'Structure model' '_struct_conn.ptnr2_label_seq_id' 54 5 'Structure model' '_struct_site.pdbx_auth_asym_id' 55 5 'Structure model' '_struct_site.pdbx_auth_comp_id' 56 5 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.5.0070 ? 1 MOSFLM 'data reduction' . ? 2 SCALA 'data scaling' . ? 3 PHASER phasing . ? 4 # _pdbx_entry_details.entry_id 3ZDA _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ;FRAGMENT OF LARGER DNA BOUND TO PROTEIN. SEQUENCE IS ACTUALLY UNKNOWN, CRYSTAL LIKELY HAS MIXED DNAS BOUND HERE. ; _pdbx_entry_details.has_ligand_of_interest ? # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 ND1 A HIS 239 ? ? O A HOH 2225 ? ? 2.07 2 1 O A HOH 2074 ? ? O A HOH 2157 ? ? 2.07 3 1 O A HOH 2156 ? ? O A HOH 2157 ? ? 2.11 # _pdbx_validate_symm_contact.id 1 _pdbx_validate_symm_contact.PDB_model_num 1 _pdbx_validate_symm_contact.auth_atom_id_1 P _pdbx_validate_symm_contact.auth_asym_id_1 B _pdbx_validate_symm_contact.auth_comp_id_1 DG _pdbx_validate_symm_contact.auth_seq_id_1 1 _pdbx_validate_symm_contact.PDB_ins_code_1 ? _pdbx_validate_symm_contact.label_alt_id_1 ? _pdbx_validate_symm_contact.site_symmetry_1 1_555 _pdbx_validate_symm_contact.auth_atom_id_2 "O3'" _pdbx_validate_symm_contact.auth_asym_id_2 C _pdbx_validate_symm_contact.auth_comp_id_2 DC _pdbx_validate_symm_contact.auth_seq_id_2 16 _pdbx_validate_symm_contact.PDB_ins_code_2 ? _pdbx_validate_symm_contact.label_alt_id_2 ? _pdbx_validate_symm_contact.site_symmetry_2 2_555 _pdbx_validate_symm_contact.dist 1.83 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 CB A CYS 29 ? ? SG A CYS 29 ? ? 1.690 1.812 -0.122 0.016 N 2 1 "O3'" C DC 16 ? ? "C3'" C DC 16 ? ? 1.378 1.419 -0.041 0.006 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 CB A ASP 9 ? ? CG A ASP 9 ? ? OD2 A ASP 9 ? ? 112.49 118.30 -5.81 0.90 N 2 1 "O4'" B DG 3 ? ? "C1'" B DG 3 ? ? N9 B DG 3 ? ? 111.97 108.30 3.67 0.30 N 3 1 "O4'" B DC 4 ? ? "C1'" B DC 4 ? ? N1 B DC 4 ? ? 110.61 108.30 2.31 0.30 N 4 1 "O4'" C DA 11 ? ? "C1'" C DA 11 ? ? N9 C DA 11 ? ? 110.27 108.30 1.97 0.30 N 5 1 "C3'" C DA 11 ? ? "O3'" C DA 11 ? ? P C DA 12 ? ? 127.77 119.70 8.07 1.20 Y 6 1 "C3'" C DA 12 ? ? "O3'" C DA 12 ? ? P C DG 13 ? ? 127.69 119.70 7.99 1.20 Y # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id LEU _pdbx_validate_torsion.auth_asym_id A _pdbx_validate_torsion.auth_seq_id 171 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi -90.68 _pdbx_validate_torsion.psi -62.83 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A ASP 51 ? CG ? A ASP 51 CG 2 1 Y 1 A ASP 51 ? OD1 ? A ASP 51 OD1 3 1 Y 1 A ASP 51 ? OD2 ? A ASP 51 OD2 4 1 Y 1 A ARG 54 ? CG ? A ARG 54 CG 5 1 Y 1 A ARG 54 ? CD ? A ARG 54 CD 6 1 Y 1 A ARG 54 ? NE ? A ARG 54 NE 7 1 Y 1 A ARG 54 ? CZ ? A ARG 54 CZ 8 1 Y 1 A ARG 54 ? NH1 ? A ARG 54 NH1 9 1 Y 1 A ARG 54 ? NH2 ? A ARG 54 NH2 10 1 Y 1 A GLU 75 ? CG ? A GLU 75 CG 11 1 Y 1 A GLU 75 ? CD ? A GLU 75 CD 12 1 Y 1 A GLU 75 ? OE1 ? A GLU 75 OE1 13 1 Y 1 A GLU 75 ? OE2 ? A GLU 75 OE2 14 1 Y 1 A GLU 157 ? CG ? A GLU 157 CG 15 1 Y 1 A GLU 157 ? CD ? A GLU 157 CD 16 1 Y 1 A GLU 157 ? OE1 ? A GLU 157 OE1 17 1 Y 1 A GLU 157 ? OE2 ? A GLU 157 OE2 18 1 Y 1 A ASN 206 ? CG ? A ASN 206 CG 19 1 Y 1 A ASN 206 ? OD1 ? A ASN 206 OD1 20 1 Y 1 A ASN 206 ? ND2 ? A ASN 206 ND2 21 1 Y 1 A GLU 212 ? CG ? A GLU 212 CG 22 1 Y 1 A GLU 212 ? CD ? A GLU 212 CD 23 1 Y 1 A GLU 212 ? OE1 ? A GLU 212 OE1 24 1 Y 1 A GLU 212 ? OE2 ? A GLU 212 OE2 25 1 Y 1 A ARG 215 ? CG ? A ARG 215 CG 26 1 Y 1 A ARG 215 ? CD ? A ARG 215 CD 27 1 Y 1 A ARG 215 ? NE ? A ARG 215 NE 28 1 Y 1 A ARG 215 ? CZ ? A ARG 215 CZ 29 1 Y 1 A ARG 215 ? NH1 ? A ARG 215 NH1 30 1 Y 1 A ARG 215 ? NH2 ? A ARG 215 NH2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 1 ? A MET 1 2 1 Y 1 A GLU 52 ? A GLU 52 3 1 Y 1 A ASN 53 ? A ASN 53 4 1 Y 1 A ARG 251 ? A ARG 251 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 DA OP3 O N N 88 DA P P N N 89 DA OP1 O N N 90 DA OP2 O N N 91 DA "O5'" O N N 92 DA "C5'" C N N 93 DA "C4'" C N R 94 DA "O4'" O N N 95 DA "C3'" C N S 96 DA "O3'" O N N 97 DA "C2'" C N N 98 DA "C1'" C N R 99 DA N9 N Y N 100 DA C8 C Y N 101 DA N7 N Y N 102 DA C5 C Y N 103 DA C6 C Y N 104 DA N6 N N N 105 DA N1 N Y N 106 DA C2 C Y N 107 DA N3 N Y N 108 DA C4 C Y N 109 DA HOP3 H N N 110 DA HOP2 H N N 111 DA "H5'" H N N 112 DA "H5''" H N N 113 DA "H4'" H N N 114 DA "H3'" H N N 115 DA "HO3'" H N N 116 DA "H2'" H N N 117 DA "H2''" H N N 118 DA "H1'" H N N 119 DA H8 H N N 120 DA H61 H N N 121 DA H62 H N N 122 DA H2 H N N 123 DC OP3 O N N 124 DC P P N N 125 DC OP1 O N N 126 DC OP2 O N N 127 DC "O5'" O N N 128 DC "C5'" C N N 129 DC "C4'" C N R 130 DC "O4'" O N N 131 DC "C3'" C N S 132 DC "O3'" O N N 133 DC "C2'" C N N 134 DC "C1'" C N R 135 DC N1 N N N 136 DC C2 C N N 137 DC O2 O N N 138 DC N3 N N N 139 DC C4 C N N 140 DC N4 N N N 141 DC C5 C N N 142 DC C6 C N N 143 DC HOP3 H N N 144 DC HOP2 H N N 145 DC "H5'" H N N 146 DC "H5''" H N N 147 DC "H4'" H N N 148 DC "H3'" H N N 149 DC "HO3'" H N N 150 DC "H2'" H N N 151 DC "H2''" H N N 152 DC "H1'" H N N 153 DC H41 H N N 154 DC H42 H N N 155 DC H5 H N N 156 DC H6 H N N 157 DG OP3 O N N 158 DG P P N N 159 DG OP1 O N N 160 DG OP2 O N N 161 DG "O5'" O N N 162 DG "C5'" C N N 163 DG "C4'" C N R 164 DG "O4'" O N N 165 DG "C3'" C N S 166 DG "O3'" O N N 167 DG "C2'" C N N 168 DG "C1'" C N R 169 DG N9 N Y N 170 DG C8 C Y N 171 DG N7 N Y N 172 DG C5 C Y N 173 DG C6 C N N 174 DG O6 O N N 175 DG N1 N N N 176 DG C2 C N N 177 DG N2 N N N 178 DG N3 N N N 179 DG C4 C Y N 180 DG HOP3 H N N 181 DG HOP2 H N N 182 DG "H5'" H N N 183 DG "H5''" H N N 184 DG "H4'" H N N 185 DG "H3'" H N N 186 DG "HO3'" H N N 187 DG "H2'" H N N 188 DG "H2''" H N N 189 DG "H1'" H N N 190 DG H8 H N N 191 DG H1 H N N 192 DG H21 H N N 193 DG H22 H N N 194 GLN N N N N 195 GLN CA C N S 196 GLN C C N N 197 GLN O O N N 198 GLN CB C N N 199 GLN CG C N N 200 GLN CD C N N 201 GLN OE1 O N N 202 GLN NE2 N N N 203 GLN OXT O N N 204 GLN H H N N 205 GLN H2 H N N 206 GLN HA H N N 207 GLN HB2 H N N 208 GLN HB3 H N N 209 GLN HG2 H N N 210 GLN HG3 H N N 211 GLN HE21 H N N 212 GLN HE22 H N N 213 GLN HXT H N N 214 GLU N N N N 215 GLU CA C N S 216 GLU C C N N 217 GLU O O N N 218 GLU CB C N N 219 GLU CG C N N 220 GLU CD C N N 221 GLU OE1 O N N 222 GLU OE2 O N N 223 GLU OXT O N N 224 GLU H H N N 225 GLU H2 H N N 226 GLU HA H N N 227 GLU HB2 H N N 228 GLU HB3 H N N 229 GLU HG2 H N N 230 GLU HG3 H N N 231 GLU HE2 H N N 232 GLU HXT H N N 233 GLY N N N N 234 GLY CA C N N 235 GLY C C N N 236 GLY O O N N 237 GLY OXT O N N 238 GLY H H N N 239 GLY H2 H N N 240 GLY HA2 H N N 241 GLY HA3 H N N 242 GLY HXT H N N 243 HIS N N N N 244 HIS CA C N S 245 HIS C C N N 246 HIS O O N N 247 HIS CB C N N 248 HIS CG C Y N 249 HIS ND1 N Y N 250 HIS CD2 C Y N 251 HIS CE1 C Y N 252 HIS NE2 N Y N 253 HIS OXT O N N 254 HIS H H N N 255 HIS H2 H N N 256 HIS HA H N N 257 HIS HB2 H N N 258 HIS HB3 H N N 259 HIS HD1 H N N 260 HIS HD2 H N N 261 HIS HE1 H N N 262 HIS HE2 H N N 263 HIS HXT H N N 264 HOH O O N N 265 HOH H1 H N N 266 HOH H2 H N N 267 ILE N N N N 268 ILE CA C N S 269 ILE C C N N 270 ILE O O N N 271 ILE CB C N S 272 ILE CG1 C N N 273 ILE CG2 C N N 274 ILE CD1 C N N 275 ILE OXT O N N 276 ILE H H N N 277 ILE H2 H N N 278 ILE HA H N N 279 ILE HB H N N 280 ILE HG12 H N N 281 ILE HG13 H N N 282 ILE HG21 H N N 283 ILE HG22 H N N 284 ILE HG23 H N N 285 ILE HD11 H N N 286 ILE HD12 H N N 287 ILE HD13 H N N 288 ILE HXT H N N 289 K K K N N 290 LEU N N N N 291 LEU CA C N S 292 LEU C C N N 293 LEU O O N N 294 LEU CB C N N 295 LEU CG C N N 296 LEU CD1 C N N 297 LEU CD2 C N N 298 LEU OXT O N N 299 LEU H H N N 300 LEU H2 H N N 301 LEU HA H N N 302 LEU HB2 H N N 303 LEU HB3 H N N 304 LEU HG H N N 305 LEU HD11 H N N 306 LEU HD12 H N N 307 LEU HD13 H N N 308 LEU HD21 H N N 309 LEU HD22 H N N 310 LEU HD23 H N N 311 LEU HXT H N N 312 LYS N N N N 313 LYS CA C N S 314 LYS C C N N 315 LYS O O N N 316 LYS CB C N N 317 LYS CG C N N 318 LYS CD C N N 319 LYS CE C N N 320 LYS NZ N N N 321 LYS OXT O N N 322 LYS H H N N 323 LYS H2 H N N 324 LYS HA H N N 325 LYS HB2 H N N 326 LYS HB3 H N N 327 LYS HG2 H N N 328 LYS HG3 H N N 329 LYS HD2 H N N 330 LYS HD3 H N N 331 LYS HE2 H N N 332 LYS HE3 H N N 333 LYS HZ1 H N N 334 LYS HZ2 H N N 335 LYS HZ3 H N N 336 LYS HXT H N N 337 MET N N N N 338 MET CA C N S 339 MET C C N N 340 MET O O N N 341 MET CB C N N 342 MET CG C N N 343 MET SD S N N 344 MET CE C N N 345 MET OXT O N N 346 MET H H N N 347 MET H2 H N N 348 MET HA H N N 349 MET HB2 H N N 350 MET HB3 H N N 351 MET HG2 H N N 352 MET HG3 H N N 353 MET HE1 H N N 354 MET HE2 H N N 355 MET HE3 H N N 356 MET HXT H N N 357 MG MG MG N N 358 PHE N N N N 359 PHE CA C N S 360 PHE C C N N 361 PHE O O N N 362 PHE CB C N N 363 PHE CG C Y N 364 PHE CD1 C Y N 365 PHE CD2 C Y N 366 PHE CE1 C Y N 367 PHE CE2 C Y N 368 PHE CZ C Y N 369 PHE OXT O N N 370 PHE H H N N 371 PHE H2 H N N 372 PHE HA H N N 373 PHE HB2 H N N 374 PHE HB3 H N N 375 PHE HD1 H N N 376 PHE HD2 H N N 377 PHE HE1 H N N 378 PHE HE2 H N N 379 PHE HZ H N N 380 PHE HXT H N N 381 PIV CT C N N 382 PIV C1 C N N 383 PIV C2 C N N 384 PIV C3 C N N 385 PIV C C N N 386 PIV O1 O N N 387 PIV O2 O N N 388 PIV H11 H N N 389 PIV H12 H N N 390 PIV H13 H N N 391 PIV H21 H N N 392 PIV H22 H N N 393 PIV H23 H N N 394 PIV H31 H N N 395 PIV H32 H N N 396 PIV H33 H N N 397 PIV HO2 H N N 398 PO4 P P N N 399 PO4 O1 O N N 400 PO4 O2 O N N 401 PO4 O3 O N N 402 PO4 O4 O N N 403 PRO N N N N 404 PRO CA C N S 405 PRO C C N N 406 PRO O O N N 407 PRO CB C N N 408 PRO CG C N N 409 PRO CD C N N 410 PRO OXT O N N 411 PRO H H N N 412 PRO HA H N N 413 PRO HB2 H N N 414 PRO HB3 H N N 415 PRO HG2 H N N 416 PRO HG3 H N N 417 PRO HD2 H N N 418 PRO HD3 H N N 419 PRO HXT H N N 420 SER N N N N 421 SER CA C N S 422 SER C C N N 423 SER O O N N 424 SER CB C N N 425 SER OG O N N 426 SER OXT O N N 427 SER H H N N 428 SER H2 H N N 429 SER HA H N N 430 SER HB2 H N N 431 SER HB3 H N N 432 SER HG H N N 433 SER HXT H N N 434 THR N N N N 435 THR CA C N S 436 THR C C N N 437 THR O O N N 438 THR CB C N R 439 THR OG1 O N N 440 THR CG2 C N N 441 THR OXT O N N 442 THR H H N N 443 THR H2 H N N 444 THR HA H N N 445 THR HB H N N 446 THR HG1 H N N 447 THR HG21 H N N 448 THR HG22 H N N 449 THR HG23 H N N 450 THR HXT H N N 451 TRP N N N N 452 TRP CA C N S 453 TRP C C N N 454 TRP O O N N 455 TRP CB C N N 456 TRP CG C Y N 457 TRP CD1 C Y N 458 TRP CD2 C Y N 459 TRP NE1 N Y N 460 TRP CE2 C Y N 461 TRP CE3 C Y N 462 TRP CZ2 C Y N 463 TRP CZ3 C Y N 464 TRP CH2 C Y N 465 TRP OXT O N N 466 TRP H H N N 467 TRP H2 H N N 468 TRP HA H N N 469 TRP HB2 H N N 470 TRP HB3 H N N 471 TRP HD1 H N N 472 TRP HE1 H N N 473 TRP HE3 H N N 474 TRP HZ2 H N N 475 TRP HZ3 H N N 476 TRP HH2 H N N 477 TRP HXT H N N 478 TYR N N N N 479 TYR CA C N S 480 TYR C C N N 481 TYR O O N N 482 TYR CB C N N 483 TYR CG C Y N 484 TYR CD1 C Y N 485 TYR CD2 C Y N 486 TYR CE1 C Y N 487 TYR CE2 C Y N 488 TYR CZ C Y N 489 TYR OH O N N 490 TYR OXT O N N 491 TYR H H N N 492 TYR H2 H N N 493 TYR HA H N N 494 TYR HB2 H N N 495 TYR HB3 H N N 496 TYR HD1 H N N 497 TYR HD2 H N N 498 TYR HE1 H N N 499 TYR HE2 H N N 500 TYR HH H N N 501 TYR HXT H N N 502 VAL N N N N 503 VAL CA C N S 504 VAL C C N N 505 VAL O O N N 506 VAL CB C N N 507 VAL CG1 C N N 508 VAL CG2 C N N 509 VAL OXT O N N 510 VAL H H N N 511 VAL H2 H N N 512 VAL HA H N N 513 VAL HB H N N 514 VAL HG11 H N N 515 VAL HG12 H N N 516 VAL HG13 H N N 517 VAL HG21 H N N 518 VAL HG22 H N N 519 VAL HG23 H N N 520 VAL HXT H N N 521 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 DA OP3 P sing N N 83 DA OP3 HOP3 sing N N 84 DA P OP1 doub N N 85 DA P OP2 sing N N 86 DA P "O5'" sing N N 87 DA OP2 HOP2 sing N N 88 DA "O5'" "C5'" sing N N 89 DA "C5'" "C4'" sing N N 90 DA "C5'" "H5'" sing N N 91 DA "C5'" "H5''" sing N N 92 DA "C4'" "O4'" sing N N 93 DA "C4'" "C3'" sing N N 94 DA "C4'" "H4'" sing N N 95 DA "O4'" "C1'" sing N N 96 DA "C3'" "O3'" sing N N 97 DA "C3'" "C2'" sing N N 98 DA "C3'" "H3'" sing N N 99 DA "O3'" "HO3'" sing N N 100 DA "C2'" "C1'" sing N N 101 DA "C2'" "H2'" sing N N 102 DA "C2'" "H2''" sing N N 103 DA "C1'" N9 sing N N 104 DA "C1'" "H1'" sing N N 105 DA N9 C8 sing Y N 106 DA N9 C4 sing Y N 107 DA C8 N7 doub Y N 108 DA C8 H8 sing N N 109 DA N7 C5 sing Y N 110 DA C5 C6 sing Y N 111 DA C5 C4 doub Y N 112 DA C6 N6 sing N N 113 DA C6 N1 doub Y N 114 DA N6 H61 sing N N 115 DA N6 H62 sing N N 116 DA N1 C2 sing Y N 117 DA C2 N3 doub Y N 118 DA C2 H2 sing N N 119 DA N3 C4 sing Y N 120 DC OP3 P sing N N 121 DC OP3 HOP3 sing N N 122 DC P OP1 doub N N 123 DC P OP2 sing N N 124 DC P "O5'" sing N N 125 DC OP2 HOP2 sing N N 126 DC "O5'" "C5'" sing N N 127 DC "C5'" "C4'" sing N N 128 DC "C5'" "H5'" sing N N 129 DC "C5'" "H5''" sing N N 130 DC "C4'" "O4'" sing N N 131 DC "C4'" "C3'" sing N N 132 DC "C4'" "H4'" sing N N 133 DC "O4'" "C1'" sing N N 134 DC "C3'" "O3'" sing N N 135 DC "C3'" "C2'" sing N N 136 DC "C3'" "H3'" sing N N 137 DC "O3'" "HO3'" sing N N 138 DC "C2'" "C1'" sing N N 139 DC "C2'" "H2'" sing N N 140 DC "C2'" "H2''" sing N N 141 DC "C1'" N1 sing N N 142 DC "C1'" "H1'" sing N N 143 DC N1 C2 sing N N 144 DC N1 C6 sing N N 145 DC C2 O2 doub N N 146 DC C2 N3 sing N N 147 DC N3 C4 doub N N 148 DC C4 N4 sing N N 149 DC C4 C5 sing N N 150 DC N4 H41 sing N N 151 DC N4 H42 sing N N 152 DC C5 C6 doub N N 153 DC C5 H5 sing N N 154 DC C6 H6 sing N N 155 DG OP3 P sing N N 156 DG OP3 HOP3 sing N N 157 DG P OP1 doub N N 158 DG P OP2 sing N N 159 DG P "O5'" sing N N 160 DG OP2 HOP2 sing N N 161 DG "O5'" "C5'" sing N N 162 DG "C5'" "C4'" sing N N 163 DG "C5'" "H5'" sing N N 164 DG "C5'" "H5''" sing N N 165 DG "C4'" "O4'" sing N N 166 DG "C4'" "C3'" sing N N 167 DG "C4'" "H4'" sing N N 168 DG "O4'" "C1'" sing N N 169 DG "C3'" "O3'" sing N N 170 DG "C3'" "C2'" sing N N 171 DG "C3'" "H3'" sing N N 172 DG "O3'" "HO3'" sing N N 173 DG "C2'" "C1'" sing N N 174 DG "C2'" "H2'" sing N N 175 DG "C2'" "H2''" sing N N 176 DG "C1'" N9 sing N N 177 DG "C1'" "H1'" sing N N 178 DG N9 C8 sing Y N 179 DG N9 C4 sing Y N 180 DG C8 N7 doub Y N 181 DG C8 H8 sing N N 182 DG N7 C5 sing Y N 183 DG C5 C6 sing N N 184 DG C5 C4 doub Y N 185 DG C6 O6 doub N N 186 DG C6 N1 sing N N 187 DG N1 C2 sing N N 188 DG N1 H1 sing N N 189 DG C2 N2 sing N N 190 DG C2 N3 doub N N 191 DG N2 H21 sing N N 192 DG N2 H22 sing N N 193 DG N3 C4 sing N N 194 GLN N CA sing N N 195 GLN N H sing N N 196 GLN N H2 sing N N 197 GLN CA C sing N N 198 GLN CA CB sing N N 199 GLN CA HA sing N N 200 GLN C O doub N N 201 GLN C OXT sing N N 202 GLN CB CG sing N N 203 GLN CB HB2 sing N N 204 GLN CB HB3 sing N N 205 GLN CG CD sing N N 206 GLN CG HG2 sing N N 207 GLN CG HG3 sing N N 208 GLN CD OE1 doub N N 209 GLN CD NE2 sing N N 210 GLN NE2 HE21 sing N N 211 GLN NE2 HE22 sing N N 212 GLN OXT HXT sing N N 213 GLU N CA sing N N 214 GLU N H sing N N 215 GLU N H2 sing N N 216 GLU CA C sing N N 217 GLU CA CB sing N N 218 GLU CA HA sing N N 219 GLU C O doub N N 220 GLU C OXT sing N N 221 GLU CB CG sing N N 222 GLU CB HB2 sing N N 223 GLU CB HB3 sing N N 224 GLU CG CD sing N N 225 GLU CG HG2 sing N N 226 GLU CG HG3 sing N N 227 GLU CD OE1 doub N N 228 GLU CD OE2 sing N N 229 GLU OE2 HE2 sing N N 230 GLU OXT HXT sing N N 231 GLY N CA sing N N 232 GLY N H sing N N 233 GLY N H2 sing N N 234 GLY CA C sing N N 235 GLY CA HA2 sing N N 236 GLY CA HA3 sing N N 237 GLY C O doub N N 238 GLY C OXT sing N N 239 GLY OXT HXT sing N N 240 HIS N CA sing N N 241 HIS N H sing N N 242 HIS N H2 sing N N 243 HIS CA C sing N N 244 HIS CA CB sing N N 245 HIS CA HA sing N N 246 HIS C O doub N N 247 HIS C OXT sing N N 248 HIS CB CG sing N N 249 HIS CB HB2 sing N N 250 HIS CB HB3 sing N N 251 HIS CG ND1 sing Y N 252 HIS CG CD2 doub Y N 253 HIS ND1 CE1 doub Y N 254 HIS ND1 HD1 sing N N 255 HIS CD2 NE2 sing Y N 256 HIS CD2 HD2 sing N N 257 HIS CE1 NE2 sing Y N 258 HIS CE1 HE1 sing N N 259 HIS NE2 HE2 sing N N 260 HIS OXT HXT sing N N 261 HOH O H1 sing N N 262 HOH O H2 sing N N 263 ILE N CA sing N N 264 ILE N H sing N N 265 ILE N H2 sing N N 266 ILE CA C sing N N 267 ILE CA CB sing N N 268 ILE CA HA sing N N 269 ILE C O doub N N 270 ILE C OXT sing N N 271 ILE CB CG1 sing N N 272 ILE CB CG2 sing N N 273 ILE CB HB sing N N 274 ILE CG1 CD1 sing N N 275 ILE CG1 HG12 sing N N 276 ILE CG1 HG13 sing N N 277 ILE CG2 HG21 sing N N 278 ILE CG2 HG22 sing N N 279 ILE CG2 HG23 sing N N 280 ILE CD1 HD11 sing N N 281 ILE CD1 HD12 sing N N 282 ILE CD1 HD13 sing N N 283 ILE OXT HXT sing N N 284 LEU N CA sing N N 285 LEU N H sing N N 286 LEU N H2 sing N N 287 LEU CA C sing N N 288 LEU CA CB sing N N 289 LEU CA HA sing N N 290 LEU C O doub N N 291 LEU C OXT sing N N 292 LEU CB CG sing N N 293 LEU CB HB2 sing N N 294 LEU CB HB3 sing N N 295 LEU CG CD1 sing N N 296 LEU CG CD2 sing N N 297 LEU CG HG sing N N 298 LEU CD1 HD11 sing N N 299 LEU CD1 HD12 sing N N 300 LEU CD1 HD13 sing N N 301 LEU CD2 HD21 sing N N 302 LEU CD2 HD22 sing N N 303 LEU CD2 HD23 sing N N 304 LEU OXT HXT sing N N 305 LYS N CA sing N N 306 LYS N H sing N N 307 LYS N H2 sing N N 308 LYS CA C sing N N 309 LYS CA CB sing N N 310 LYS CA HA sing N N 311 LYS C O doub N N 312 LYS C OXT sing N N 313 LYS CB CG sing N N 314 LYS CB HB2 sing N N 315 LYS CB HB3 sing N N 316 LYS CG CD sing N N 317 LYS CG HG2 sing N N 318 LYS CG HG3 sing N N 319 LYS CD CE sing N N 320 LYS CD HD2 sing N N 321 LYS CD HD3 sing N N 322 LYS CE NZ sing N N 323 LYS CE HE2 sing N N 324 LYS CE HE3 sing N N 325 LYS NZ HZ1 sing N N 326 LYS NZ HZ2 sing N N 327 LYS NZ HZ3 sing N N 328 LYS OXT HXT sing N N 329 MET N CA sing N N 330 MET N H sing N N 331 MET N H2 sing N N 332 MET CA C sing N N 333 MET CA CB sing N N 334 MET CA HA sing N N 335 MET C O doub N N 336 MET C OXT sing N N 337 MET CB CG sing N N 338 MET CB HB2 sing N N 339 MET CB HB3 sing N N 340 MET CG SD sing N N 341 MET CG HG2 sing N N 342 MET CG HG3 sing N N 343 MET SD CE sing N N 344 MET CE HE1 sing N N 345 MET CE HE2 sing N N 346 MET CE HE3 sing N N 347 MET OXT HXT sing N N 348 PHE N CA sing N N 349 PHE N H sing N N 350 PHE N H2 sing N N 351 PHE CA C sing N N 352 PHE CA CB sing N N 353 PHE CA HA sing N N 354 PHE C O doub N N 355 PHE C OXT sing N N 356 PHE CB CG sing N N 357 PHE CB HB2 sing N N 358 PHE CB HB3 sing N N 359 PHE CG CD1 doub Y N 360 PHE CG CD2 sing Y N 361 PHE CD1 CE1 sing Y N 362 PHE CD1 HD1 sing N N 363 PHE CD2 CE2 doub Y N 364 PHE CD2 HD2 sing N N 365 PHE CE1 CZ doub Y N 366 PHE CE1 HE1 sing N N 367 PHE CE2 CZ sing Y N 368 PHE CE2 HE2 sing N N 369 PHE CZ HZ sing N N 370 PHE OXT HXT sing N N 371 PIV CT C1 sing N N 372 PIV CT C2 sing N N 373 PIV CT C3 sing N N 374 PIV CT C sing N N 375 PIV C1 H11 sing N N 376 PIV C1 H12 sing N N 377 PIV C1 H13 sing N N 378 PIV C2 H21 sing N N 379 PIV C2 H22 sing N N 380 PIV C2 H23 sing N N 381 PIV C3 H31 sing N N 382 PIV C3 H32 sing N N 383 PIV C3 H33 sing N N 384 PIV C O1 doub N N 385 PIV C O2 sing N N 386 PIV O2 HO2 sing N N 387 PO4 P O1 doub N N 388 PO4 P O2 sing N N 389 PO4 P O3 sing N N 390 PO4 P O4 sing N N 391 PRO N CA sing N N 392 PRO N CD sing N N 393 PRO N H sing N N 394 PRO CA C sing N N 395 PRO CA CB sing N N 396 PRO CA HA sing N N 397 PRO C O doub N N 398 PRO C OXT sing N N 399 PRO CB CG sing N N 400 PRO CB HB2 sing N N 401 PRO CB HB3 sing N N 402 PRO CG CD sing N N 403 PRO CG HG2 sing N N 404 PRO CG HG3 sing N N 405 PRO CD HD2 sing N N 406 PRO CD HD3 sing N N 407 PRO OXT HXT sing N N 408 SER N CA sing N N 409 SER N H sing N N 410 SER N H2 sing N N 411 SER CA C sing N N 412 SER CA CB sing N N 413 SER CA HA sing N N 414 SER C O doub N N 415 SER C OXT sing N N 416 SER CB OG sing N N 417 SER CB HB2 sing N N 418 SER CB HB3 sing N N 419 SER OG HG sing N N 420 SER OXT HXT sing N N 421 THR N CA sing N N 422 THR N H sing N N 423 THR N H2 sing N N 424 THR CA C sing N N 425 THR CA CB sing N N 426 THR CA HA sing N N 427 THR C O doub N N 428 THR C OXT sing N N 429 THR CB OG1 sing N N 430 THR CB CG2 sing N N 431 THR CB HB sing N N 432 THR OG1 HG1 sing N N 433 THR CG2 HG21 sing N N 434 THR CG2 HG22 sing N N 435 THR CG2 HG23 sing N N 436 THR OXT HXT sing N N 437 TRP N CA sing N N 438 TRP N H sing N N 439 TRP N H2 sing N N 440 TRP CA C sing N N 441 TRP CA CB sing N N 442 TRP CA HA sing N N 443 TRP C O doub N N 444 TRP C OXT sing N N 445 TRP CB CG sing N N 446 TRP CB HB2 sing N N 447 TRP CB HB3 sing N N 448 TRP CG CD1 doub Y N 449 TRP CG CD2 sing Y N 450 TRP CD1 NE1 sing Y N 451 TRP CD1 HD1 sing N N 452 TRP CD2 CE2 doub Y N 453 TRP CD2 CE3 sing Y N 454 TRP NE1 CE2 sing Y N 455 TRP NE1 HE1 sing N N 456 TRP CE2 CZ2 sing Y N 457 TRP CE3 CZ3 doub Y N 458 TRP CE3 HE3 sing N N 459 TRP CZ2 CH2 doub Y N 460 TRP CZ2 HZ2 sing N N 461 TRP CZ3 CH2 sing Y N 462 TRP CZ3 HZ3 sing N N 463 TRP CH2 HH2 sing N N 464 TRP OXT HXT sing N N 465 TYR N CA sing N N 466 TYR N H sing N N 467 TYR N H2 sing N N 468 TYR CA C sing N N 469 TYR CA CB sing N N 470 TYR CA HA sing N N 471 TYR C O doub N N 472 TYR C OXT sing N N 473 TYR CB CG sing N N 474 TYR CB HB2 sing N N 475 TYR CB HB3 sing N N 476 TYR CG CD1 doub Y N 477 TYR CG CD2 sing Y N 478 TYR CD1 CE1 sing Y N 479 TYR CD1 HD1 sing N N 480 TYR CD2 CE2 doub Y N 481 TYR CD2 HD2 sing N N 482 TYR CE1 CZ doub Y N 483 TYR CE1 HE1 sing N N 484 TYR CE2 CZ sing Y N 485 TYR CE2 HE2 sing N N 486 TYR CZ OH sing N N 487 TYR OH HH sing N N 488 TYR OXT HXT sing N N 489 VAL N CA sing N N 490 VAL N H sing N N 491 VAL N H2 sing N N 492 VAL CA C sing N N 493 VAL CA CB sing N N 494 VAL CA HA sing N N 495 VAL C O doub N N 496 VAL C OXT sing N N 497 VAL CB CG1 sing N N 498 VAL CB CG2 sing N N 499 VAL CB HB sing N N 500 VAL CG1 HG11 sing N N 501 VAL CG1 HG12 sing N N 502 VAL CG1 HG13 sing N N 503 VAL CG2 HG21 sing N N 504 VAL CG2 HG22 sing N N 505 VAL CG2 HG23 sing N N 506 VAL OXT HXT sing N N 507 # _ndb_struct_conf_na.entry_id 3ZDA _ndb_struct_conf_na.feature 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 B DG 1 1_555 C DC 6 1_555 -0.247 -0.289 0.229 5.508 -14.150 -2.497 1 B_DG1:DC16_C B 1 ? C 16 ? 19 1 1 B DC 2 1_555 C DG 5 1_555 -0.241 -0.029 -0.020 -2.550 -11.068 -3.202 2 B_DC2:DG15_C B 2 ? C 15 ? 19 1 1 B DG 3 1_555 C DC 4 1_555 -1.109 -0.203 0.040 -6.114 -14.223 5.860 3 B_DG3:DC14_C B 3 ? C 14 ? 19 1 1 B DC 4 1_555 C DG 3 1_555 0.210 -0.059 0.567 -4.882 3.787 6.830 4 B_DC4:DG13_C B 4 ? C 13 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 B DG 1 1_555 C DC 6 1_555 B DC 2 1_555 C DG 5 1_555 -0.230 -0.639 3.558 1.882 2.373 33.288 -1.534 0.735 3.488 4.132 -3.277 33.422 1 BB_DG1DC2:DG15DC16_CC B 1 ? C 16 ? B 2 ? C 15 ? 1 B DC 2 1_555 C DG 5 1_555 B DG 3 1_555 C DC 4 1_555 1.141 0.152 3.260 1.772 9.133 29.765 -1.485 -1.781 3.225 17.257 -3.348 31.153 2 BB_DC2DG3:DC14DG15_CC B 2 ? C 15 ? B 3 ? C 14 ? 1 B DG 3 1_555 C DC 4 1_555 B DC 4 1_555 C DG 3 1_555 -0.103 0.451 3.465 -5.788 4.821 38.885 0.061 -0.574 3.474 7.160 8.596 39.580 3 BB_DG3DC4:DG13DC14_CC B 3 ? C 14 ? B 4 ? C 13 ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 4 'POTASSIUM ION' K 5 'MAGNESIUM ION' MG 6 'PIVALIC ACID' PIV 7 'PHOSPHATE ION' PO4 8 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 3ZD9 _pdbx_initial_refinement_model.details 'PDB ENTRY 3ZD9' #