data_3ZDU # _entry.id 3ZDU # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.383 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3ZDU pdb_00003zdu 10.2210/pdb3zdu/pdb PDBE EBI-54956 ? ? WWPDB D_1290054956 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3ZDU _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 2012-11-30 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Canning, P.' 1 ? 'Elkins, J.M.' 2 ? 'Goubin, S.' 3 ? 'Mahajan, P.' 4 ? 'Pike, A.C.W.' 5 ? 'Quigley, A.' 6 ? 'MacKenzie, A.' 7 ? 'Carpenter, E.P.' 8 ? 'von Delft, F.' 9 ? 'Arrowsmith, C.H.' 10 ? 'Edwards, A.M.' 11 ? 'Bountra, C.' 12 ? 'Bullock, A.' 13 ? # _citation.id primary _citation.title 'CDKL Family Kinases Have Evolved Distinct Structural Features and Ciliary Function.' _citation.journal_abbrev 'Cell Rep' _citation.journal_volume 22 _citation.page_first 885 _citation.page_last 894 _citation.year 2018 _citation.journal_id_ASTM ? _citation.country US _citation.journal_id_ISSN 2211-1247 _citation.journal_id_CSD ? _citation.book_publisher ? _citation.pdbx_database_id_PubMed 29420175 _citation.pdbx_database_id_DOI 10.1016/j.celrep.2017.12.083 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Canning, P.' 1 ? primary 'Park, K.' 2 ? primary 'Goncalves, J.' 3 ? primary 'Li, C.' 4 ? primary 'Howard, C.J.' 5 ? primary 'Sharpe, T.D.' 6 ? primary 'Holt, L.J.' 7 ? primary 'Pelletier, L.' 8 ? primary 'Bullock, A.N.' 9 ? primary 'Leroux, M.R.' 10 ? # _cell.entry_id 3ZDU _cell.length_a 63.930 _cell.length_b 63.930 _cell.length_c 163.630 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3ZDU _symmetry.space_group_name_H-M 'P 31 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'CYCLIN-DEPENDENT KINASE-LIKE 3' 37351.379 1 2.7.11.22 YES 'KINASE DOMAIN, RESIDUES 1-324' 'TWO PHOSPHOMIMETIC POINT MUTATIONS INTRODUCED, T158D AND Y160E' 2 non-polymer syn '[4-({4-[(3-cyclopentyl-1H-pyrazol-5-yl)amino]pyrimidin-2-yl}amino)phenyl]acetonitrile' 359.428 1 ? ? ? ? 3 non-polymer syn 'ZINC ION' 65.409 2 ? ? ? ? 4 non-polymer syn 'SODIUM ION' 22.990 1 ? ? ? ? 5 non-polymer syn 1,2-ETHANEDIOL 62.068 2 ? ? ? ? 6 water nat water 18.015 159 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'SERINE/THREONINE-PROTEIN KINASE NKIAMRE' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;SMEMYETLGKVGEGSYGTVMKCKHKNTGQIVAIKIFYERPEQSVNKIAMREIKFLKQFHHENLVNLIEVFRQKKKIHLVF EFIDHTVLDELQHYCHGLESKRLRKYLFQILRAIDYLHSNNIIHRDIKPENILVSQSGITKLCDFGFARTLAAPGDIYDD EVATRWYRAPELVLKDTSYGKPVDIWALGCMIIEMATGNPYLPSSSDLDLLHKIVLKVGNLSPHLQNIFSKSPIFAGVVL PQVQHPKNARKKYPKLNGLLADIVHACLQIDPADRISSSDLLHHEYFTRDGFIEKFMPELKAKLLQEAKVNSLIKPKESS KENEL ; _entity_poly.pdbx_seq_one_letter_code_can ;SMEMYETLGKVGEGSYGTVMKCKHKNTGQIVAIKIFYERPEQSVNKIAMREIKFLKQFHHENLVNLIEVFRQKKKIHLVF EFIDHTVLDELQHYCHGLESKRLRKYLFQILRAIDYLHSNNIIHRDIKPENILVSQSGITKLCDFGFARTLAAPGDIYDD EVATRWYRAPELVLKDTSYGKPVDIWALGCMIIEMATGNPYLPSSSDLDLLHKIVLKVGNLSPHLQNIFSKSPIFAGVVL PQVQHPKNARKKYPKLNGLLADIVHACLQIDPADRISSSDLLHHEYFTRDGFIEKFMPELKAKLLQEAKVNSLIKPKESS KENEL ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 MET n 1 3 GLU n 1 4 MET n 1 5 TYR n 1 6 GLU n 1 7 THR n 1 8 LEU n 1 9 GLY n 1 10 LYS n 1 11 VAL n 1 12 GLY n 1 13 GLU n 1 14 GLY n 1 15 SER n 1 16 TYR n 1 17 GLY n 1 18 THR n 1 19 VAL n 1 20 MET n 1 21 LYS n 1 22 CYS n 1 23 LYS n 1 24 HIS n 1 25 LYS n 1 26 ASN n 1 27 THR n 1 28 GLY n 1 29 GLN n 1 30 ILE n 1 31 VAL n 1 32 ALA n 1 33 ILE n 1 34 LYS n 1 35 ILE n 1 36 PHE n 1 37 TYR n 1 38 GLU n 1 39 ARG n 1 40 PRO n 1 41 GLU n 1 42 GLN n 1 43 SER n 1 44 VAL n 1 45 ASN n 1 46 LYS n 1 47 ILE n 1 48 ALA n 1 49 MET n 1 50 ARG n 1 51 GLU n 1 52 ILE n 1 53 LYS n 1 54 PHE n 1 55 LEU n 1 56 LYS n 1 57 GLN n 1 58 PHE n 1 59 HIS n 1 60 HIS n 1 61 GLU n 1 62 ASN n 1 63 LEU n 1 64 VAL n 1 65 ASN n 1 66 LEU n 1 67 ILE n 1 68 GLU n 1 69 VAL n 1 70 PHE n 1 71 ARG n 1 72 GLN n 1 73 LYS n 1 74 LYS n 1 75 LYS n 1 76 ILE n 1 77 HIS n 1 78 LEU n 1 79 VAL n 1 80 PHE n 1 81 GLU n 1 82 PHE n 1 83 ILE n 1 84 ASP n 1 85 HIS n 1 86 THR n 1 87 VAL n 1 88 LEU n 1 89 ASP n 1 90 GLU n 1 91 LEU n 1 92 GLN n 1 93 HIS n 1 94 TYR n 1 95 CYS n 1 96 HIS n 1 97 GLY n 1 98 LEU n 1 99 GLU n 1 100 SER n 1 101 LYS n 1 102 ARG n 1 103 LEU n 1 104 ARG n 1 105 LYS n 1 106 TYR n 1 107 LEU n 1 108 PHE n 1 109 GLN n 1 110 ILE n 1 111 LEU n 1 112 ARG n 1 113 ALA n 1 114 ILE n 1 115 ASP n 1 116 TYR n 1 117 LEU n 1 118 HIS n 1 119 SER n 1 120 ASN n 1 121 ASN n 1 122 ILE n 1 123 ILE n 1 124 HIS n 1 125 ARG n 1 126 ASP n 1 127 ILE n 1 128 LYS n 1 129 PRO n 1 130 GLU n 1 131 ASN n 1 132 ILE n 1 133 LEU n 1 134 VAL n 1 135 SER n 1 136 GLN n 1 137 SER n 1 138 GLY n 1 139 ILE n 1 140 THR n 1 141 LYS n 1 142 LEU n 1 143 CYS n 1 144 ASP n 1 145 PHE n 1 146 GLY n 1 147 PHE n 1 148 ALA n 1 149 ARG n 1 150 THR n 1 151 LEU n 1 152 ALA n 1 153 ALA n 1 154 PRO n 1 155 GLY n 1 156 ASP n 1 157 ILE n 1 158 TYR n 1 159 ASP n 1 160 ASP n 1 161 GLU n 1 162 VAL n 1 163 ALA n 1 164 THR n 1 165 ARG n 1 166 TRP n 1 167 TYR n 1 168 ARG n 1 169 ALA n 1 170 PRO n 1 171 GLU n 1 172 LEU n 1 173 VAL n 1 174 LEU n 1 175 LYS n 1 176 ASP n 1 177 THR n 1 178 SER n 1 179 TYR n 1 180 GLY n 1 181 LYS n 1 182 PRO n 1 183 VAL n 1 184 ASP n 1 185 ILE n 1 186 TRP n 1 187 ALA n 1 188 LEU n 1 189 GLY n 1 190 CYS n 1 191 MET n 1 192 ILE n 1 193 ILE n 1 194 GLU n 1 195 MET n 1 196 ALA n 1 197 THR n 1 198 GLY n 1 199 ASN n 1 200 PRO n 1 201 TYR n 1 202 LEU n 1 203 PRO n 1 204 SER n 1 205 SER n 1 206 SER n 1 207 ASP n 1 208 LEU n 1 209 ASP n 1 210 LEU n 1 211 LEU n 1 212 HIS n 1 213 LYS n 1 214 ILE n 1 215 VAL n 1 216 LEU n 1 217 LYS n 1 218 VAL n 1 219 GLY n 1 220 ASN n 1 221 LEU n 1 222 SER n 1 223 PRO n 1 224 HIS n 1 225 LEU n 1 226 GLN n 1 227 ASN n 1 228 ILE n 1 229 PHE n 1 230 SER n 1 231 LYS n 1 232 SER n 1 233 PRO n 1 234 ILE n 1 235 PHE n 1 236 ALA n 1 237 GLY n 1 238 VAL n 1 239 VAL n 1 240 LEU n 1 241 PRO n 1 242 GLN n 1 243 VAL n 1 244 GLN n 1 245 HIS n 1 246 PRO n 1 247 LYS n 1 248 ASN n 1 249 ALA n 1 250 ARG n 1 251 LYS n 1 252 LYS n 1 253 TYR n 1 254 PRO n 1 255 LYS n 1 256 LEU n 1 257 ASN n 1 258 GLY n 1 259 LEU n 1 260 LEU n 1 261 ALA n 1 262 ASP n 1 263 ILE n 1 264 VAL n 1 265 HIS n 1 266 ALA n 1 267 CYS n 1 268 LEU n 1 269 GLN n 1 270 ILE n 1 271 ASP n 1 272 PRO n 1 273 ALA n 1 274 ASP n 1 275 ARG n 1 276 ILE n 1 277 SER n 1 278 SER n 1 279 SER n 1 280 ASP n 1 281 LEU n 1 282 LEU n 1 283 HIS n 1 284 HIS n 1 285 GLU n 1 286 TYR n 1 287 PHE n 1 288 THR n 1 289 ARG n 1 290 ASP n 1 291 GLY n 1 292 PHE n 1 293 ILE n 1 294 GLU n 1 295 LYS n 1 296 PHE n 1 297 MET n 1 298 PRO n 1 299 GLU n 1 300 LEU n 1 301 LYS n 1 302 ALA n 1 303 LYS n 1 304 LEU n 1 305 LEU n 1 306 GLN n 1 307 GLU n 1 308 ALA n 1 309 LYS n 1 310 VAL n 1 311 ASN n 1 312 SER n 1 313 LEU n 1 314 ILE n 1 315 LYS n 1 316 PRO n 1 317 LYS n 1 318 GLU n 1 319 SER n 1 320 SER n 1 321 LYS n 1 322 GLU n 1 323 ASN n 1 324 GLU n 1 325 LEU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name HUMAN _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'HOMO SAPIENS' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name 'FALL ARMYWORM' _entity_src_gen.pdbx_host_org_scientific_name 'SPODOPTERA FRUGIPERDA' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 7108 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line SF9 _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type BACULOVIRUS _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name PFB-LIC-BSE _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description 'SITE-DIRECTED MUTAGENESIS' # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code CDKL3_HUMAN _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_db_accession Q8IVW4 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3ZDU _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 2 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 325 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q8IVW4 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 324 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 324 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3ZDU SER A 1 ? UNP Q8IVW4 ? ? 'expression tag' 0 1 1 3ZDU ASP A 159 ? UNP Q8IVW4 THR 158 'engineered mutation' 158 2 1 3ZDU GLU A 161 ? UNP Q8IVW4 TYR 160 'engineered mutation' 160 3 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 38R non-polymer . '[4-({4-[(3-cyclopentyl-1H-pyrazol-5-yl)amino]pyrimidin-2-yl}amino)phenyl]acetonitrile' ? 'C20 H21 N7' 359.428 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 EDO non-polymer . 1,2-ETHANEDIOL 'ETHYLENE GLYCOL' 'C2 H6 O2' 62.068 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NA non-polymer . 'SODIUM ION' ? 'Na 1' 22.990 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 ZN non-polymer . 'ZINC ION' ? 'Zn 2' 65.409 # _exptl.entry_id 3ZDU _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.72 _exptl_crystal.density_percent_sol 54.8 _exptl_crystal.description NONE # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details '0.03M ZN CL, 30% PEG_6000, 5% ETHYLENE GLYCOL, MES PH5.5' # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC CCD' _diffrn_detector.pdbx_collection_date 2012-10-29 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9611 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'DIAMOND BEAMLINE I04' _diffrn_source.pdbx_synchrotron_site Diamond _diffrn_source.pdbx_synchrotron_beamline I04 _diffrn_source.pdbx_wavelength 0.9611 _diffrn_source.pdbx_wavelength_list ? # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 3ZDU _reflns.observed_criterion_sigma_I 2.0 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 54.54 _reflns.d_resolution_high 2.20 _reflns.number_obs 20446 _reflns.number_all ? _reflns.percent_possible_obs 99.9 _reflns.pdbx_Rmerge_I_obs 0.10 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 10.70 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 5.2 # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 2.20 _reflns_shell.d_res_low 2.27 _reflns_shell.percent_possible_all 100.0 _reflns_shell.Rmerge_I_obs 0.63 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 2.50 _reflns_shell.pdbx_redundancy 2.5 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 3ZDU _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 18821 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F . _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 45.89 _refine.ls_d_res_high 2.20 _refine.ls_percent_reflns_obs 97.10 _refine.ls_R_factor_obs 0.21662 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.21425 _refine.ls_R_factor_R_free 0.26248 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.1 _refine.ls_number_reflns_R_free 1013 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.947 _refine.correlation_coeff_Fo_to_Fc_free 0.908 _refine.B_iso_mean 55.118 _refine.aniso_B[1][1] 1.27 _refine.aniso_B[2][2] 1.27 _refine.aniso_B[3][3] -4.11 _refine.aniso_B[1][2] 1.27 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. U VALUES WITH TLS ADDED' _refine.pdbx_starting_model 'ENSEMBLE OF PDB ENTRIES 4AGU AND 4AAA' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.260 _refine.pdbx_overall_ESU_R_Free 0.217 _refine.overall_SU_ML 0.176 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 12.919 _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2319 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 38 _refine_hist.number_atoms_solvent 159 _refine_hist.number_atoms_total 2516 _refine_hist.d_res_high 2.20 _refine_hist.d_res_low 45.89 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.013 0.019 ? 2414 'X-RAY DIFFRACTION' ? r_bond_other_d 0.001 0.020 ? 2298 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.510 1.970 ? 3261 'X-RAY DIFFRACTION' ? r_angle_other_deg 0.793 3.000 ? 5257 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 6.554 5.000 ? 294 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 38.150 23.861 ? 101 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 14.956 15.000 ? 397 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 24.066 15.000 ? 10 'X-RAY DIFFRACTION' ? r_chiral_restr 0.086 0.200 ? 371 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.007 0.021 ? 2675 'X-RAY DIFFRACTION' ? r_gen_planes_other 0.001 0.020 ? 556 'X-RAY DIFFRACTION' ? r_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 1.143 1.999 ? 1185 'X-RAY DIFFRACTION' ? r_mcbond_other 1.142 1.997 ? 1184 'X-RAY DIFFRACTION' ? r_mcangle_it 1.823 2.995 ? 1476 'X-RAY DIFFRACTION' ? r_mcangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scbond_it 1.763 2.126 ? 1227 'X-RAY DIFFRACTION' ? r_scbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? r_scangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.200 _refine_ls_shell.d_res_low 2.257 _refine_ls_shell.number_reflns_R_work 1056 _refine_ls_shell.R_factor_R_work 0.628 _refine_ls_shell.percent_reflns_obs 75.55 _refine_ls_shell.R_factor_R_free 0.700 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 50 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? # _struct.entry_id 3ZDU _struct.title 'Crystal structure of the human CDKL3 kinase domain' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3ZDU _struct_keywords.pdbx_keywords TRANSFERASE _struct_keywords.text 'TRANSFERASE, PHOSPHO-MIMETIC' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? E N N 4 ? F N N 5 ? G N N 5 ? H N N 6 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASN A 45 ? PHE A 58 ? ASN A 44 PHE A 57 1 ? 14 HELX_P HELX_P2 2 VAL A 87 ? TYR A 94 ? VAL A 86 TYR A 93 1 ? 8 HELX_P HELX_P3 3 GLU A 99 ? ASN A 120 ? GLU A 98 ASN A 119 1 ? 22 HELX_P HELX_P4 4 LYS A 128 ? GLU A 130 ? LYS A 127 GLU A 129 5 ? 3 HELX_P HELX_P5 5 GLU A 161 ? TRP A 166 ? GLU A 160 TRP A 165 1 ? 6 HELX_P HELX_P6 6 ALA A 169 ? LEU A 174 ? ALA A 168 LEU A 173 1 ? 6 HELX_P HELX_P7 7 LYS A 181 ? GLY A 198 ? LYS A 180 GLY A 197 1 ? 18 HELX_P HELX_P8 8 SER A 206 ? VAL A 218 ? SER A 205 VAL A 217 1 ? 13 HELX_P HELX_P9 9 SER A 222 ? SER A 232 ? SER A 221 SER A 231 1 ? 11 HELX_P HELX_P10 10 PRO A 233 ? ALA A 236 ? PRO A 232 ALA A 235 5 ? 4 HELX_P HELX_P11 11 ASN A 248 ? TYR A 253 ? ASN A 247 TYR A 252 1 ? 6 HELX_P HELX_P12 12 ASN A 257 ? LEU A 268 ? ASN A 256 LEU A 267 1 ? 12 HELX_P HELX_P13 13 ASP A 271 ? ARG A 275 ? ASP A 270 ARG A 274 5 ? 5 HELX_P HELX_P14 14 SER A 277 ? HIS A 283 ? SER A 276 HIS A 282 1 ? 7 HELX_P HELX_P15 15 HIS A 284 ? ARG A 289 ? HIS A 283 ARG A 288 1 ? 6 HELX_P HELX_P16 16 GLY A 291 ? VAL A 310 ? GLY A 290 VAL A 309 1 ? 20 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A HIS 93 NE2 ? ? ? 1_555 D ZN . ZN ? ? A HIS 92 A ZN 352 1_555 ? ? ? ? ? ? ? 2.050 ? ? metalc2 metalc ? ? A ASP 126 OD2 ? ? ? 1_555 E NA . NA ? ? A ASP 125 A NA 353 1_555 ? ? ? ? ? ? ? 2.240 ? ? metalc3 metalc ? ? A ASP 144 OD2 ? ? ? 1_555 E NA . NA ? ? A ASP 143 A NA 353 1_555 ? ? ? ? ? ? ? 2.271 ? ? metalc4 metalc ? ? A ASP 144 OD1 ? ? ? 1_555 E NA . NA ? ? A ASP 143 A NA 353 1_555 ? ? ? ? ? ? ? 3.178 ? ? metalc5 metalc ? ? A ASP 176 OD1 ? ? ? 1_555 C ZN . ZN ? ? A ASP 175 A ZN 351 1_555 ? ? ? ? ? ? ? 2.030 ? ? metalc6 metalc ? ? A HIS 212 NE2 ? ? ? 5_555 D ZN . ZN ? ? A HIS 211 A ZN 352 1_555 ? ? ? ? ? ? ? 2.175 ? ? metalc7 metalc ? ? A HIS 224 NE2 ? ? ? 1_555 C ZN . ZN ? ? A HIS 223 A ZN 351 1_555 ? ? ? ? ? ? ? 2.071 ? ? metalc8 metalc ? ? A HIS 283 NE2 ? ? ? 4_546 C ZN . ZN ? ? A HIS 282 A ZN 351 1_555 ? ? ? ? ? ? ? 2.147 ? ? metalc9 metalc ? ? C ZN . ZN ? ? ? 1_555 H HOH . O ? ? A ZN 351 A HOH 2087 1_555 ? ? ? ? ? ? ? 2.139 ? ? metalc10 metalc ? ? D ZN . ZN ? ? ? 1_555 H HOH . O ? ? A ZN 352 A HOH 2029 1_555 ? ? ? ? ? ? ? 2.175 ? ? metalc11 metalc ? ? D ZN . ZN ? ? ? 1_555 H HOH . O ? ? A ZN 352 A HOH 2033 1_555 ? ? ? ? ? ? ? 2.670 ? ? metalc12 metalc ? ? D ZN . ZN ? ? ? 1_555 H HOH . O ? ? A ZN 352 A HOH 2034 1_555 ? ? ? ? ? ? ? 2.260 ? ? metalc13 metalc ? ? D ZN . ZN ? ? ? 1_555 H HOH . O ? ? A ZN 352 A HOH 2158 1_555 ? ? ? ? ? ? ? 1.775 ? ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA ? 5 ? AB ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA 1 2 ? anti-parallel AA 2 3 ? anti-parallel AA 3 4 ? anti-parallel AA 4 5 ? anti-parallel AB 1 2 ? anti-parallel AB 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA 1 TYR A 5 ? GLY A 14 ? TYR A 4 GLY A 13 AA 2 GLY A 17 ? HIS A 24 ? GLY A 16 HIS A 23 AA 3 ILE A 30 ? ILE A 35 ? ILE A 29 ILE A 34 AA 4 HIS A 77 ? GLU A 81 ? HIS A 76 GLU A 80 AA 5 LEU A 66 ? PHE A 70 ? LEU A 65 PHE A 69 AB 1 HIS A 85 ? THR A 86 ? HIS A 84 THR A 85 AB 2 ILE A 132 ? VAL A 134 ? ILE A 131 VAL A 133 AB 3 THR A 140 ? LEU A 142 ? THR A 139 LEU A 141 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA 1 2 N GLY A 14 ? N GLY A 13 O GLY A 17 ? O GLY A 16 AA 2 3 N CYS A 22 ? N CYS A 21 O VAL A 31 ? O VAL A 30 AA 3 4 N LYS A 34 ? N LYS A 33 O LEU A 78 ? O LEU A 77 AA 4 5 O VAL A 79 ? O VAL A 78 N ILE A 67 ? N ILE A 66 AB 1 2 N HIS A 85 ? N HIS A 84 O VAL A 134 ? O VAL A 133 AB 2 3 N LEU A 133 ? N LEU A 132 O LYS A 141 ? O LYS A 140 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A 38R 350 ? 17 'BINDING SITE FOR RESIDUE 38R A 350' AC2 Software A ZN 351 ? 4 'BINDING SITE FOR RESIDUE ZN A 351' AC3 Software A ZN 352 ? 6 'BINDING SITE FOR RESIDUE ZN A 352' AC4 Software A NA 353 ? 3 'BINDING SITE FOR RESIDUE NA A 353' AC5 Software A EDO 354 ? 2 'BINDING SITE FOR RESIDUE EDO A 354' AC6 Software A EDO 355 ? 5 'BINDING SITE FOR RESIDUE EDO A 355' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 17 VAL A 11 ? VAL A 10 . ? 1_555 ? 2 AC1 17 ALA A 32 ? ALA A 31 . ? 1_555 ? 3 AC1 17 LYS A 34 ? LYS A 33 . ? 1_555 ? 4 AC1 17 PHE A 80 ? PHE A 79 . ? 1_555 ? 5 AC1 17 GLU A 81 ? GLU A 80 . ? 1_555 ? 6 AC1 17 PHE A 82 ? PHE A 81 . ? 1_555 ? 7 AC1 17 ILE A 83 ? ILE A 82 . ? 1_555 ? 8 AC1 17 ASP A 84 ? ASP A 83 . ? 1_555 ? 9 AC1 17 HIS A 85 ? HIS A 84 . ? 1_555 ? 10 AC1 17 THR A 86 ? THR A 85 . ? 1_555 ? 11 AC1 17 ASP A 89 ? ASP A 88 . ? 1_555 ? 12 AC1 17 GLU A 130 ? GLU A 129 . ? 1_555 ? 13 AC1 17 ASN A 131 ? ASN A 130 . ? 1_555 ? 14 AC1 17 LEU A 133 ? LEU A 132 . ? 1_555 ? 15 AC1 17 ASP A 144 ? ASP A 143 . ? 1_555 ? 16 AC1 17 HOH H . ? HOH A 2004 . ? 1_555 ? 17 AC1 17 HOH H . ? HOH A 2028 . ? 1_555 ? 18 AC2 4 ASP A 176 ? ASP A 175 . ? 1_555 ? 19 AC2 4 HIS A 224 ? HIS A 223 . ? 1_555 ? 20 AC2 4 HIS A 283 ? HIS A 282 . ? 4_546 ? 21 AC2 4 HOH H . ? HOH A 2087 . ? 1_555 ? 22 AC3 6 HIS A 93 ? HIS A 92 . ? 1_555 ? 23 AC3 6 HIS A 212 ? HIS A 211 . ? 5_555 ? 24 AC3 6 HOH H . ? HOH A 2029 . ? 1_555 ? 25 AC3 6 HOH H . ? HOH A 2033 . ? 1_555 ? 26 AC3 6 HOH H . ? HOH A 2034 . ? 1_555 ? 27 AC3 6 HOH H . ? HOH A 2158 . ? 1_555 ? 28 AC4 3 ASP A 126 ? ASP A 125 . ? 1_555 ? 29 AC4 3 ASP A 144 ? ASP A 143 . ? 1_555 ? 30 AC4 3 HOH H . ? HOH A 2069 . ? 1_555 ? 31 AC5 2 ARG A 112 ? ARG A 111 . ? 1_555 ? 32 AC5 2 HOH H . ? HOH A 2059 . ? 1_555 ? 33 AC6 5 ILE A 276 ? ILE A 275 . ? 1_555 ? 34 AC6 5 SER A 277 ? SER A 276 . ? 1_555 ? 35 AC6 5 ASP A 280 ? ASP A 279 . ? 1_555 ? 36 AC6 5 HOH H . ? HOH A 2057 . ? 1_555 ? 37 AC6 5 HOH H . ? HOH A 2141 . ? 1_555 ? # _database_PDB_matrix.entry_id 3ZDU _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3ZDU _atom_sites.fract_transf_matrix[1][1] 0.015642 _atom_sites.fract_transf_matrix[1][2] 0.009031 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.018062 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.006111 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N NA O S ZN # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 0 ? ? ? A . n A 1 2 MET 2 1 1 MET MET A . n A 1 3 GLU 3 2 2 GLU GLU A . n A 1 4 MET 4 3 3 MET MET A . n A 1 5 TYR 5 4 4 TYR TYR A . n A 1 6 GLU 6 5 5 GLU GLU A . n A 1 7 THR 7 6 6 THR THR A . n A 1 8 LEU 8 7 7 LEU LEU A . n A 1 9 GLY 9 8 8 GLY GLY A . n A 1 10 LYS 10 9 9 LYS LYS A . n A 1 11 VAL 11 10 10 VAL VAL A . n A 1 12 GLY 12 11 11 GLY GLY A . n A 1 13 GLU 13 12 12 GLU GLU A . n A 1 14 GLY 14 13 13 GLY GLY A . n A 1 15 SER 15 14 14 SER SER A . n A 1 16 TYR 16 15 15 TYR TYR A . n A 1 17 GLY 17 16 16 GLY GLY A . n A 1 18 THR 18 17 17 THR THR A . n A 1 19 VAL 19 18 18 VAL VAL A . n A 1 20 MET 20 19 19 MET MET A . n A 1 21 LYS 21 20 20 LYS LYS A . n A 1 22 CYS 22 21 21 CYS CYS A . n A 1 23 LYS 23 22 22 LYS LYS A . n A 1 24 HIS 24 23 23 HIS HIS A . n A 1 25 LYS 25 24 24 LYS LYS A . n A 1 26 ASN 26 25 25 ASN ASN A . n A 1 27 THR 27 26 26 THR THR A . n A 1 28 GLY 28 27 27 GLY GLY A . n A 1 29 GLN 29 28 28 GLN GLN A . n A 1 30 ILE 30 29 29 ILE ILE A . n A 1 31 VAL 31 30 30 VAL VAL A . n A 1 32 ALA 32 31 31 ALA ALA A . n A 1 33 ILE 33 32 32 ILE ILE A . n A 1 34 LYS 34 33 33 LYS LYS A . n A 1 35 ILE 35 34 34 ILE ILE A . n A 1 36 PHE 36 35 35 PHE PHE A . n A 1 37 TYR 37 36 36 TYR TYR A . n A 1 38 GLU 38 37 ? ? ? A . n A 1 39 ARG 39 38 ? ? ? A . n A 1 40 PRO 40 39 ? ? ? A . n A 1 41 GLU 41 40 ? ? ? A . n A 1 42 GLN 42 41 ? ? ? A . n A 1 43 SER 43 42 ? ? ? A . n A 1 44 VAL 44 43 ? ? ? A . n A 1 45 ASN 45 44 44 ASN ASN A . n A 1 46 LYS 46 45 45 LYS LYS A . n A 1 47 ILE 47 46 46 ILE ILE A . n A 1 48 ALA 48 47 47 ALA ALA A . n A 1 49 MET 49 48 48 MET MET A . n A 1 50 ARG 50 49 49 ARG ARG A . n A 1 51 GLU 51 50 50 GLU GLU A . n A 1 52 ILE 52 51 51 ILE ILE A . n A 1 53 LYS 53 52 52 LYS LYS A . n A 1 54 PHE 54 53 53 PHE PHE A . n A 1 55 LEU 55 54 54 LEU LEU A . n A 1 56 LYS 56 55 55 LYS LYS A . n A 1 57 GLN 57 56 56 GLN GLN A . n A 1 58 PHE 58 57 57 PHE PHE A . n A 1 59 HIS 59 58 58 HIS HIS A . n A 1 60 HIS 60 59 59 HIS HIS A . n A 1 61 GLU 61 60 60 GLU GLU A . n A 1 62 ASN 62 61 61 ASN ASN A . n A 1 63 LEU 63 62 62 LEU LEU A . n A 1 64 VAL 64 63 63 VAL VAL A . n A 1 65 ASN 65 64 64 ASN ASN A . n A 1 66 LEU 66 65 65 LEU LEU A . n A 1 67 ILE 67 66 66 ILE ILE A . n A 1 68 GLU 68 67 67 GLU GLU A . n A 1 69 VAL 69 68 68 VAL VAL A . n A 1 70 PHE 70 69 69 PHE PHE A . n A 1 71 ARG 71 70 70 ARG ARG A . n A 1 72 GLN 72 71 71 GLN GLN A . n A 1 73 LYS 73 72 72 LYS LYS A . n A 1 74 LYS 74 73 73 LYS LYS A . n A 1 75 LYS 75 74 74 LYS LYS A . n A 1 76 ILE 76 75 75 ILE ILE A . n A 1 77 HIS 77 76 76 HIS HIS A . n A 1 78 LEU 78 77 77 LEU LEU A . n A 1 79 VAL 79 78 78 VAL VAL A . n A 1 80 PHE 80 79 79 PHE PHE A . n A 1 81 GLU 81 80 80 GLU GLU A . n A 1 82 PHE 82 81 81 PHE PHE A . n A 1 83 ILE 83 82 82 ILE ILE A . n A 1 84 ASP 84 83 83 ASP ASP A . n A 1 85 HIS 85 84 84 HIS HIS A . n A 1 86 THR 86 85 85 THR THR A . n A 1 87 VAL 87 86 86 VAL VAL A . n A 1 88 LEU 88 87 87 LEU LEU A . n A 1 89 ASP 89 88 88 ASP ASP A . n A 1 90 GLU 90 89 89 GLU GLU A . n A 1 91 LEU 91 90 90 LEU LEU A . n A 1 92 GLN 92 91 91 GLN GLN A . n A 1 93 HIS 93 92 92 HIS HIS A . n A 1 94 TYR 94 93 93 TYR TYR A . n A 1 95 CYS 95 94 94 CYS CYS A . n A 1 96 HIS 96 95 95 HIS HIS A . n A 1 97 GLY 97 96 96 GLY GLY A . n A 1 98 LEU 98 97 97 LEU LEU A . n A 1 99 GLU 99 98 98 GLU GLU A . n A 1 100 SER 100 99 99 SER SER A . n A 1 101 LYS 101 100 100 LYS LYS A . n A 1 102 ARG 102 101 101 ARG ARG A . n A 1 103 LEU 103 102 102 LEU LEU A . n A 1 104 ARG 104 103 103 ARG ARG A . n A 1 105 LYS 105 104 104 LYS LYS A . n A 1 106 TYR 106 105 105 TYR TYR A . n A 1 107 LEU 107 106 106 LEU LEU A . n A 1 108 PHE 108 107 107 PHE PHE A . n A 1 109 GLN 109 108 108 GLN GLN A . n A 1 110 ILE 110 109 109 ILE ILE A . n A 1 111 LEU 111 110 110 LEU LEU A . n A 1 112 ARG 112 111 111 ARG ARG A . n A 1 113 ALA 113 112 112 ALA ALA A . n A 1 114 ILE 114 113 113 ILE ILE A . n A 1 115 ASP 115 114 114 ASP ASP A . n A 1 116 TYR 116 115 115 TYR TYR A . n A 1 117 LEU 117 116 116 LEU LEU A . n A 1 118 HIS 118 117 117 HIS HIS A . n A 1 119 SER 119 118 118 SER SER A . n A 1 120 ASN 120 119 119 ASN ASN A . n A 1 121 ASN 121 120 120 ASN ASN A . n A 1 122 ILE 122 121 121 ILE ILE A . n A 1 123 ILE 123 122 122 ILE ILE A . n A 1 124 HIS 124 123 123 HIS HIS A . n A 1 125 ARG 125 124 124 ARG ARG A . n A 1 126 ASP 126 125 125 ASP ASP A . n A 1 127 ILE 127 126 126 ILE ILE A . n A 1 128 LYS 128 127 127 LYS LYS A . n A 1 129 PRO 129 128 128 PRO PRO A . n A 1 130 GLU 130 129 129 GLU GLU A . n A 1 131 ASN 131 130 130 ASN ASN A . n A 1 132 ILE 132 131 131 ILE ILE A . n A 1 133 LEU 133 132 132 LEU LEU A . n A 1 134 VAL 134 133 133 VAL VAL A . n A 1 135 SER 135 134 134 SER SER A . n A 1 136 GLN 136 135 135 GLN GLN A . n A 1 137 SER 137 136 136 SER SER A . n A 1 138 GLY 138 137 137 GLY GLY A . n A 1 139 ILE 139 138 138 ILE ILE A . n A 1 140 THR 140 139 139 THR THR A . n A 1 141 LYS 141 140 140 LYS LYS A . n A 1 142 LEU 142 141 141 LEU LEU A . n A 1 143 CYS 143 142 142 CYS CYS A . n A 1 144 ASP 144 143 143 ASP ASP A . n A 1 145 PHE 145 144 144 PHE PHE A . n A 1 146 GLY 146 145 145 GLY GLY A . n A 1 147 PHE 147 146 146 PHE PHE A . n A 1 148 ALA 148 147 147 ALA ALA A . n A 1 149 ARG 149 148 148 ARG ARG A . n A 1 150 THR 150 149 149 THR THR A . n A 1 151 LEU 151 150 ? ? ? A . n A 1 152 ALA 152 151 ? ? ? A . n A 1 153 ALA 153 152 ? ? ? A . n A 1 154 PRO 154 153 ? ? ? A . n A 1 155 GLY 155 154 ? ? ? A . n A 1 156 ASP 156 155 155 ASP ASP A . n A 1 157 ILE 157 156 156 ILE ILE A . n A 1 158 TYR 158 157 157 TYR TYR A . n A 1 159 ASP 159 158 158 ASP ASP A . n A 1 160 ASP 160 159 159 ASP ASP A . n A 1 161 GLU 161 160 160 GLU GLU A . n A 1 162 VAL 162 161 161 VAL VAL A . n A 1 163 ALA 163 162 162 ALA ALA A . n A 1 164 THR 164 163 163 THR THR A . n A 1 165 ARG 165 164 164 ARG ARG A . n A 1 166 TRP 166 165 165 TRP TRP A . n A 1 167 TYR 167 166 166 TYR TYR A . n A 1 168 ARG 168 167 167 ARG ARG A . n A 1 169 ALA 169 168 168 ALA ALA A . n A 1 170 PRO 170 169 169 PRO PRO A . n A 1 171 GLU 171 170 170 GLU GLU A . n A 1 172 LEU 172 171 171 LEU LEU A . n A 1 173 VAL 173 172 172 VAL VAL A . n A 1 174 LEU 174 173 173 LEU LEU A . n A 1 175 LYS 175 174 174 LYS LYS A . n A 1 176 ASP 176 175 175 ASP ASP A . n A 1 177 THR 177 176 176 THR THR A . n A 1 178 SER 178 177 177 SER SER A . n A 1 179 TYR 179 178 178 TYR TYR A . n A 1 180 GLY 180 179 179 GLY GLY A . n A 1 181 LYS 181 180 180 LYS LYS A . n A 1 182 PRO 182 181 181 PRO PRO A . n A 1 183 VAL 183 182 182 VAL VAL A . n A 1 184 ASP 184 183 183 ASP ASP A . n A 1 185 ILE 185 184 184 ILE ILE A . n A 1 186 TRP 186 185 185 TRP TRP A . n A 1 187 ALA 187 186 186 ALA ALA A . n A 1 188 LEU 188 187 187 LEU LEU A . n A 1 189 GLY 189 188 188 GLY GLY A . n A 1 190 CYS 190 189 189 CYS CYS A . n A 1 191 MET 191 190 190 MET MET A . n A 1 192 ILE 192 191 191 ILE ILE A . n A 1 193 ILE 193 192 192 ILE ILE A . n A 1 194 GLU 194 193 193 GLU GLU A . n A 1 195 MET 195 194 194 MET MET A . n A 1 196 ALA 196 195 195 ALA ALA A . n A 1 197 THR 197 196 196 THR THR A . n A 1 198 GLY 198 197 197 GLY GLY A . n A 1 199 ASN 199 198 198 ASN ASN A . n A 1 200 PRO 200 199 199 PRO PRO A . n A 1 201 TYR 201 200 200 TYR TYR A . n A 1 202 LEU 202 201 201 LEU LEU A . n A 1 203 PRO 203 202 202 PRO PRO A . n A 1 204 SER 204 203 203 SER SER A . n A 1 205 SER 205 204 204 SER SER A . n A 1 206 SER 206 205 205 SER SER A . n A 1 207 ASP 207 206 206 ASP ASP A . n A 1 208 LEU 208 207 207 LEU LEU A . n A 1 209 ASP 209 208 208 ASP ASP A . n A 1 210 LEU 210 209 209 LEU LEU A . n A 1 211 LEU 211 210 210 LEU LEU A . n A 1 212 HIS 212 211 211 HIS HIS A . n A 1 213 LYS 213 212 212 LYS LYS A . n A 1 214 ILE 214 213 213 ILE ILE A . n A 1 215 VAL 215 214 214 VAL VAL A . n A 1 216 LEU 216 215 215 LEU LEU A . n A 1 217 LYS 217 216 216 LYS LYS A . n A 1 218 VAL 218 217 217 VAL VAL A . n A 1 219 GLY 219 218 218 GLY GLY A . n A 1 220 ASN 220 219 219 ASN ASN A . n A 1 221 LEU 221 220 220 LEU LEU A . n A 1 222 SER 222 221 221 SER SER A . n A 1 223 PRO 223 222 222 PRO PRO A . n A 1 224 HIS 224 223 223 HIS HIS A . n A 1 225 LEU 225 224 224 LEU LEU A . n A 1 226 GLN 226 225 225 GLN GLN A . n A 1 227 ASN 227 226 226 ASN ASN A . n A 1 228 ILE 228 227 227 ILE ILE A . n A 1 229 PHE 229 228 228 PHE PHE A . n A 1 230 SER 230 229 229 SER SER A . n A 1 231 LYS 231 230 230 LYS LYS A . n A 1 232 SER 232 231 231 SER SER A . n A 1 233 PRO 233 232 232 PRO PRO A . n A 1 234 ILE 234 233 233 ILE ILE A . n A 1 235 PHE 235 234 234 PHE PHE A . n A 1 236 ALA 236 235 235 ALA ALA A . n A 1 237 GLY 237 236 236 GLY GLY A . n A 1 238 VAL 238 237 237 VAL VAL A . n A 1 239 VAL 239 238 238 VAL VAL A . n A 1 240 LEU 240 239 239 LEU LEU A . n A 1 241 PRO 241 240 240 PRO PRO A . n A 1 242 GLN 242 241 241 GLN GLN A . n A 1 243 VAL 243 242 242 VAL VAL A . n A 1 244 GLN 244 243 243 GLN GLN A . n A 1 245 HIS 245 244 244 HIS HIS A . n A 1 246 PRO 246 245 245 PRO PRO A . n A 1 247 LYS 247 246 246 LYS LYS A . n A 1 248 ASN 248 247 247 ASN ASN A . n A 1 249 ALA 249 248 248 ALA ALA A . n A 1 250 ARG 250 249 249 ARG ARG A . n A 1 251 LYS 251 250 250 LYS LYS A . n A 1 252 LYS 252 251 251 LYS LYS A . n A 1 253 TYR 253 252 252 TYR TYR A . n A 1 254 PRO 254 253 253 PRO PRO A . n A 1 255 LYS 255 254 254 LYS LYS A . n A 1 256 LEU 256 255 255 LEU LEU A . n A 1 257 ASN 257 256 256 ASN ASN A . n A 1 258 GLY 258 257 257 GLY GLY A . n A 1 259 LEU 259 258 258 LEU LEU A . n A 1 260 LEU 260 259 259 LEU LEU A . n A 1 261 ALA 261 260 260 ALA ALA A . n A 1 262 ASP 262 261 261 ASP ASP A . n A 1 263 ILE 263 262 262 ILE ILE A . n A 1 264 VAL 264 263 263 VAL VAL A . n A 1 265 HIS 265 264 264 HIS HIS A . n A 1 266 ALA 266 265 265 ALA ALA A . n A 1 267 CYS 267 266 266 CYS CYS A . n A 1 268 LEU 268 267 267 LEU LEU A . n A 1 269 GLN 269 268 268 GLN GLN A . n A 1 270 ILE 270 269 269 ILE ILE A . n A 1 271 ASP 271 270 270 ASP ASP A . n A 1 272 PRO 272 271 271 PRO PRO A . n A 1 273 ALA 273 272 272 ALA ALA A . n A 1 274 ASP 274 273 273 ASP ASP A . n A 1 275 ARG 275 274 274 ARG ARG A . n A 1 276 ILE 276 275 275 ILE ILE A . n A 1 277 SER 277 276 276 SER SER A . n A 1 278 SER 278 277 277 SER SER A . n A 1 279 SER 279 278 278 SER SER A . n A 1 280 ASP 280 279 279 ASP ASP A . n A 1 281 LEU 281 280 280 LEU LEU A . n A 1 282 LEU 282 281 281 LEU LEU A . n A 1 283 HIS 283 282 282 HIS HIS A . n A 1 284 HIS 284 283 283 HIS HIS A . n A 1 285 GLU 285 284 284 GLU GLU A . n A 1 286 TYR 286 285 285 TYR TYR A . n A 1 287 PHE 287 286 286 PHE PHE A . n A 1 288 THR 288 287 287 THR THR A . n A 1 289 ARG 289 288 288 ARG ARG A . n A 1 290 ASP 290 289 289 ASP ASP A . n A 1 291 GLY 291 290 290 GLY GLY A . n A 1 292 PHE 292 291 291 PHE PHE A . n A 1 293 ILE 293 292 292 ILE ILE A . n A 1 294 GLU 294 293 293 GLU GLU A . n A 1 295 LYS 295 294 294 LYS LYS A . n A 1 296 PHE 296 295 295 PHE PHE A . n A 1 297 MET 297 296 296 MET MET A . n A 1 298 PRO 298 297 297 PRO PRO A . n A 1 299 GLU 299 298 298 GLU GLU A . n A 1 300 LEU 300 299 299 LEU LEU A . n A 1 301 LYS 301 300 300 LYS LYS A . n A 1 302 ALA 302 301 301 ALA ALA A . n A 1 303 LYS 303 302 302 LYS LYS A . n A 1 304 LEU 304 303 303 LEU LEU A . n A 1 305 LEU 305 304 304 LEU LEU A . n A 1 306 GLN 306 305 305 GLN GLN A . n A 1 307 GLU 307 306 306 GLU GLU A . n A 1 308 ALA 308 307 307 ALA ALA A . n A 1 309 LYS 309 308 308 LYS LYS A . n A 1 310 VAL 310 309 309 VAL VAL A . n A 1 311 ASN 311 310 ? ? ? A . n A 1 312 SER 312 311 ? ? ? A . n A 1 313 LEU 313 312 ? ? ? A . n A 1 314 ILE 314 313 ? ? ? A . n A 1 315 LYS 315 314 ? ? ? A . n A 1 316 PRO 316 315 ? ? ? A . n A 1 317 LYS 317 316 ? ? ? A . n A 1 318 GLU 318 317 ? ? ? A . n A 1 319 SER 319 318 ? ? ? A . n A 1 320 SER 320 319 ? ? ? A . n A 1 321 LYS 321 320 ? ? ? A . n A 1 322 GLU 322 321 ? ? ? A . n A 1 323 ASN 323 322 ? ? ? A . n A 1 324 GLU 324 323 ? ? ? A . n A 1 325 LEU 325 324 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 38R 1 350 350 38R 38R A . C 3 ZN 1 351 351 ZN ZN A . D 3 ZN 1 352 352 ZN ZN A . E 4 NA 1 353 353 NA NA A . F 5 EDO 1 354 354 EDO EDO A . G 5 EDO 1 355 355 EDO EDO A . H 6 HOH 1 2001 2001 HOH HOH A . H 6 HOH 2 2002 2002 HOH HOH A . H 6 HOH 3 2003 2003 HOH HOH A . H 6 HOH 4 2004 2004 HOH HOH A . H 6 HOH 5 2005 2005 HOH HOH A . H 6 HOH 6 2006 2006 HOH HOH A . H 6 HOH 7 2007 2007 HOH HOH A . H 6 HOH 8 2008 2008 HOH HOH A . H 6 HOH 9 2009 2009 HOH HOH A . H 6 HOH 10 2010 2010 HOH HOH A . H 6 HOH 11 2011 2011 HOH HOH A . H 6 HOH 12 2012 2012 HOH HOH A . H 6 HOH 13 2013 2013 HOH HOH A . H 6 HOH 14 2014 2014 HOH HOH A . H 6 HOH 15 2015 2015 HOH HOH A . H 6 HOH 16 2016 2016 HOH HOH A . H 6 HOH 17 2017 2017 HOH HOH A . H 6 HOH 18 2018 2018 HOH HOH A . H 6 HOH 19 2019 2019 HOH HOH A . H 6 HOH 20 2020 2020 HOH HOH A . H 6 HOH 21 2021 2021 HOH HOH A . H 6 HOH 22 2022 2022 HOH HOH A . H 6 HOH 23 2023 2023 HOH HOH A . H 6 HOH 24 2024 2024 HOH HOH A . H 6 HOH 25 2025 2025 HOH HOH A . H 6 HOH 26 2026 2026 HOH HOH A . H 6 HOH 27 2027 2027 HOH HOH A . H 6 HOH 28 2028 2028 HOH HOH A . H 6 HOH 29 2029 2029 HOH HOH A . H 6 HOH 30 2030 2030 HOH HOH A . H 6 HOH 31 2031 2031 HOH HOH A . H 6 HOH 32 2032 2032 HOH HOH A . H 6 HOH 33 2033 2033 HOH HOH A . H 6 HOH 34 2034 2034 HOH HOH A . H 6 HOH 35 2035 2035 HOH HOH A . H 6 HOH 36 2036 2036 HOH HOH A . H 6 HOH 37 2037 2037 HOH HOH A . H 6 HOH 38 2038 2038 HOH HOH A . H 6 HOH 39 2039 2039 HOH HOH A . H 6 HOH 40 2040 2040 HOH HOH A . H 6 HOH 41 2041 2041 HOH HOH A . H 6 HOH 42 2042 2042 HOH HOH A . H 6 HOH 43 2043 2043 HOH HOH A . H 6 HOH 44 2044 2044 HOH HOH A . H 6 HOH 45 2045 2045 HOH HOH A . H 6 HOH 46 2046 2046 HOH HOH A . H 6 HOH 47 2047 2047 HOH HOH A . H 6 HOH 48 2048 2048 HOH HOH A . H 6 HOH 49 2049 2049 HOH HOH A . H 6 HOH 50 2050 2050 HOH HOH A . H 6 HOH 51 2051 2051 HOH HOH A . H 6 HOH 52 2052 2052 HOH HOH A . H 6 HOH 53 2053 2053 HOH HOH A . H 6 HOH 54 2054 2054 HOH HOH A . H 6 HOH 55 2055 2055 HOH HOH A . H 6 HOH 56 2056 2056 HOH HOH A . H 6 HOH 57 2057 2057 HOH HOH A . H 6 HOH 58 2058 2058 HOH HOH A . H 6 HOH 59 2059 2059 HOH HOH A . H 6 HOH 60 2060 2060 HOH HOH A . H 6 HOH 61 2061 2061 HOH HOH A . H 6 HOH 62 2062 2062 HOH HOH A . H 6 HOH 63 2063 2063 HOH HOH A . H 6 HOH 64 2064 2064 HOH HOH A . H 6 HOH 65 2065 2065 HOH HOH A . H 6 HOH 66 2066 2066 HOH HOH A . H 6 HOH 67 2067 2067 HOH HOH A . H 6 HOH 68 2068 2068 HOH HOH A . H 6 HOH 69 2069 2069 HOH HOH A . H 6 HOH 70 2070 2070 HOH HOH A . H 6 HOH 71 2071 2071 HOH HOH A . H 6 HOH 72 2072 2072 HOH HOH A . H 6 HOH 73 2073 2073 HOH HOH A . H 6 HOH 74 2074 2074 HOH HOH A . H 6 HOH 75 2075 2075 HOH HOH A . H 6 HOH 76 2076 2076 HOH HOH A . H 6 HOH 77 2077 2077 HOH HOH A . H 6 HOH 78 2078 2078 HOH HOH A . H 6 HOH 79 2079 2079 HOH HOH A . H 6 HOH 80 2080 2080 HOH HOH A . H 6 HOH 81 2081 2081 HOH HOH A . H 6 HOH 82 2082 2082 HOH HOH A . H 6 HOH 83 2083 2083 HOH HOH A . H 6 HOH 84 2084 2084 HOH HOH A . H 6 HOH 85 2085 2085 HOH HOH A . H 6 HOH 86 2086 2086 HOH HOH A . H 6 HOH 87 2087 2087 HOH HOH A . H 6 HOH 88 2088 2088 HOH HOH A . H 6 HOH 89 2089 2089 HOH HOH A . H 6 HOH 90 2090 2090 HOH HOH A . H 6 HOH 91 2091 2091 HOH HOH A . H 6 HOH 92 2092 2092 HOH HOH A . H 6 HOH 93 2093 2093 HOH HOH A . H 6 HOH 94 2094 2094 HOH HOH A . H 6 HOH 95 2095 2095 HOH HOH A . H 6 HOH 96 2096 2096 HOH HOH A . H 6 HOH 97 2097 2097 HOH HOH A . H 6 HOH 98 2098 2098 HOH HOH A . H 6 HOH 99 2099 2099 HOH HOH A . H 6 HOH 100 2100 2100 HOH HOH A . H 6 HOH 101 2101 2101 HOH HOH A . H 6 HOH 102 2102 2102 HOH HOH A . H 6 HOH 103 2103 2103 HOH HOH A . H 6 HOH 104 2104 2104 HOH HOH A . H 6 HOH 105 2105 2105 HOH HOH A . H 6 HOH 106 2106 2106 HOH HOH A . H 6 HOH 107 2107 2107 HOH HOH A . H 6 HOH 108 2108 2108 HOH HOH A . H 6 HOH 109 2109 2109 HOH HOH A . H 6 HOH 110 2110 2110 HOH HOH A . H 6 HOH 111 2111 2111 HOH HOH A . H 6 HOH 112 2112 2112 HOH HOH A . H 6 HOH 113 2113 2113 HOH HOH A . H 6 HOH 114 2114 2114 HOH HOH A . H 6 HOH 115 2115 2115 HOH HOH A . H 6 HOH 116 2116 2116 HOH HOH A . H 6 HOH 117 2117 2117 HOH HOH A . H 6 HOH 118 2118 2118 HOH HOH A . H 6 HOH 119 2119 2119 HOH HOH A . H 6 HOH 120 2120 2120 HOH HOH A . H 6 HOH 121 2121 2121 HOH HOH A . H 6 HOH 122 2122 2122 HOH HOH A . H 6 HOH 123 2123 2123 HOH HOH A . H 6 HOH 124 2124 2124 HOH HOH A . H 6 HOH 125 2125 2125 HOH HOH A . H 6 HOH 126 2126 2126 HOH HOH A . H 6 HOH 127 2127 2127 HOH HOH A . H 6 HOH 128 2128 2128 HOH HOH A . H 6 HOH 129 2129 2129 HOH HOH A . H 6 HOH 130 2130 2130 HOH HOH A . H 6 HOH 131 2131 2131 HOH HOH A . H 6 HOH 132 2132 2132 HOH HOH A . H 6 HOH 133 2133 2133 HOH HOH A . H 6 HOH 134 2134 2134 HOH HOH A . H 6 HOH 135 2135 2135 HOH HOH A . H 6 HOH 136 2136 2136 HOH HOH A . H 6 HOH 137 2137 2137 HOH HOH A . H 6 HOH 138 2138 2138 HOH HOH A . H 6 HOH 139 2139 2139 HOH HOH A . H 6 HOH 140 2140 2140 HOH HOH A . H 6 HOH 141 2141 2141 HOH HOH A . H 6 HOH 142 2142 2142 HOH HOH A . H 6 HOH 143 2143 2143 HOH HOH A . H 6 HOH 144 2144 2144 HOH HOH A . H 6 HOH 145 2145 2145 HOH HOH A . H 6 HOH 146 2146 2146 HOH HOH A . H 6 HOH 147 2147 2147 HOH HOH A . H 6 HOH 148 2148 2148 HOH HOH A . H 6 HOH 149 2149 2149 HOH HOH A . H 6 HOH 150 2150 2150 HOH HOH A . H 6 HOH 151 2151 2151 HOH HOH A . H 6 HOH 152 2152 2152 HOH HOH A . H 6 HOH 153 2153 2153 HOH HOH A . H 6 HOH 154 2154 2154 HOH HOH A . H 6 HOH 155 2155 2155 HOH HOH A . H 6 HOH 156 2156 2156 HOH HOH A . H 6 HOH 157 2157 2157 HOH HOH A . H 6 HOH 158 2158 2158 HOH HOH A . H 6 HOH 159 2159 2159 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 2840 ? 1 MORE -152.7 ? 1 'SSA (A^2)' 26930 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 5_555 x-y,-y,-z+2/3 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 109.0866666667 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id A _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 2079 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id H _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 NE2 ? A HIS 93 ? A HIS 92 ? 1_555 ZN ? D ZN . ? A ZN 352 ? 1_555 NE2 ? A HIS 212 ? A HIS 211 ? 5_555 107.6 ? 2 NE2 ? A HIS 93 ? A HIS 92 ? 1_555 ZN ? D ZN . ? A ZN 352 ? 1_555 O ? H HOH . ? A HOH 2029 ? 1_555 88.5 ? 3 NE2 ? A HIS 212 ? A HIS 211 ? 5_555 ZN ? D ZN . ? A ZN 352 ? 1_555 O ? H HOH . ? A HOH 2029 ? 1_555 96.0 ? 4 NE2 ? A HIS 93 ? A HIS 92 ? 1_555 ZN ? D ZN . ? A ZN 352 ? 1_555 O ? H HOH . ? A HOH 2033 ? 1_555 83.5 ? 5 NE2 ? A HIS 212 ? A HIS 211 ? 5_555 ZN ? D ZN . ? A ZN 352 ? 1_555 O ? H HOH . ? A HOH 2033 ? 1_555 167.5 ? 6 O ? H HOH . ? A HOH 2029 ? 1_555 ZN ? D ZN . ? A ZN 352 ? 1_555 O ? H HOH . ? A HOH 2033 ? 1_555 78.2 ? 7 NE2 ? A HIS 93 ? A HIS 92 ? 1_555 ZN ? D ZN . ? A ZN 352 ? 1_555 O ? H HOH . ? A HOH 2034 ? 1_555 102.3 ? 8 NE2 ? A HIS 212 ? A HIS 211 ? 5_555 ZN ? D ZN . ? A ZN 352 ? 1_555 O ? H HOH . ? A HOH 2034 ? 1_555 108.3 ? 9 O ? H HOH . ? A HOH 2029 ? 1_555 ZN ? D ZN . ? A ZN 352 ? 1_555 O ? H HOH . ? A HOH 2034 ? 1_555 148.6 ? 10 O ? H HOH . ? A HOH 2033 ? 1_555 ZN ? D ZN . ? A ZN 352 ? 1_555 O ? H HOH . ? A HOH 2034 ? 1_555 73.9 ? 11 NE2 ? A HIS 93 ? A HIS 92 ? 1_555 ZN ? D ZN . ? A ZN 352 ? 1_555 O ? H HOH . ? A HOH 2158 ? 1_555 154.0 ? 12 NE2 ? A HIS 212 ? A HIS 211 ? 5_555 ZN ? D ZN . ? A ZN 352 ? 1_555 O ? H HOH . ? A HOH 2158 ? 1_555 98.3 ? 13 O ? H HOH . ? A HOH 2029 ? 1_555 ZN ? D ZN . ? A ZN 352 ? 1_555 O ? H HOH . ? A HOH 2158 ? 1_555 91.4 ? 14 O ? H HOH . ? A HOH 2033 ? 1_555 ZN ? D ZN . ? A ZN 352 ? 1_555 O ? H HOH . ? A HOH 2158 ? 1_555 71.0 ? 15 O ? H HOH . ? A HOH 2034 ? 1_555 ZN ? D ZN . ? A ZN 352 ? 1_555 O ? H HOH . ? A HOH 2158 ? 1_555 66.2 ? 16 OD2 ? A ASP 126 ? A ASP 125 ? 1_555 NA ? E NA . ? A NA 353 ? 1_555 OD2 ? A ASP 144 ? A ASP 143 ? 1_555 92.6 ? 17 OD2 ? A ASP 126 ? A ASP 125 ? 1_555 NA ? E NA . ? A NA 353 ? 1_555 OD1 ? A ASP 144 ? A ASP 143 ? 1_555 125.4 ? 18 OD2 ? A ASP 144 ? A ASP 143 ? 1_555 NA ? E NA . ? A NA 353 ? 1_555 OD1 ? A ASP 144 ? A ASP 143 ? 1_555 44.2 ? 19 OD1 ? A ASP 176 ? A ASP 175 ? 1_555 ZN ? C ZN . ? A ZN 351 ? 1_555 NE2 ? A HIS 224 ? A HIS 223 ? 1_555 126.3 ? 20 OD1 ? A ASP 176 ? A ASP 175 ? 1_555 ZN ? C ZN . ? A ZN 351 ? 1_555 NE2 ? A HIS 283 ? A HIS 282 ? 4_546 95.8 ? 21 NE2 ? A HIS 224 ? A HIS 223 ? 1_555 ZN ? C ZN . ? A ZN 351 ? 1_555 NE2 ? A HIS 283 ? A HIS 282 ? 4_546 111.6 ? 22 OD1 ? A ASP 176 ? A ASP 175 ? 1_555 ZN ? C ZN . ? A ZN 351 ? 1_555 O ? H HOH . ? A HOH 2087 ? 1_555 104.0 ? 23 NE2 ? A HIS 224 ? A HIS 223 ? 1_555 ZN ? C ZN . ? A ZN 351 ? 1_555 O ? H HOH . ? A HOH 2087 ? 1_555 110.2 ? 24 NE2 ? A HIS 283 ? A HIS 282 ? 4_546 ZN ? C ZN . ? A ZN 351 ? 1_555 O ? H HOH . ? A HOH 2087 ? 1_555 107.0 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2013-03-20 2 'Structure model' 1 1 2018-01-24 3 'Structure model' 1 2 2022-03-30 4 'Structure model' 1 3 2023-12-20 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 2 'Structure model' 'Structure summary' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' 5 3 'Structure model' Other 6 4 'Structure model' 'Data collection' 7 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' audit_author 2 2 'Structure model' citation_author 3 3 'Structure model' citation 4 3 'Structure model' citation_author 5 3 'Structure model' database_2 6 3 'Structure model' pdbx_database_status 7 3 'Structure model' pdbx_struct_conn_angle 8 3 'Structure model' struct_conn 9 3 'Structure model' struct_site 10 4 'Structure model' chem_comp_atom 11 4 'Structure model' chem_comp_bond 12 4 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_audit_author.name' 2 2 'Structure model' '_citation_author.name' 3 3 'Structure model' '_citation.country' 4 3 'Structure model' '_citation.journal_abbrev' 5 3 'Structure model' '_citation.journal_id_CSD' 6 3 'Structure model' '_citation.journal_id_ISSN' 7 3 'Structure model' '_citation.journal_volume' 8 3 'Structure model' '_citation.page_first' 9 3 'Structure model' '_citation.page_last' 10 3 'Structure model' '_citation.pdbx_database_id_DOI' 11 3 'Structure model' '_citation.pdbx_database_id_PubMed' 12 3 'Structure model' '_citation.title' 13 3 'Structure model' '_citation.year' 14 3 'Structure model' '_database_2.pdbx_DOI' 15 3 'Structure model' '_database_2.pdbx_database_accession' 16 3 'Structure model' '_pdbx_database_status.status_code_sf' 17 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 18 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 19 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 20 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 21 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 22 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 23 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_symmetry' 24 3 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_comp_id' 25 3 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_seq_id' 26 3 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_asym_id' 27 3 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_atom_id' 28 3 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_comp_id' 29 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 30 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 31 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 32 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 33 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 34 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 35 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_symmetry' 36 3 'Structure model' '_pdbx_struct_conn_angle.value' 37 3 'Structure model' '_struct_conn.pdbx_dist_value' 38 3 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 39 3 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 40 3 'Structure model' '_struct_conn.ptnr1_label_asym_id' 41 3 'Structure model' '_struct_conn.ptnr1_label_atom_id' 42 3 'Structure model' '_struct_conn.ptnr1_label_comp_id' 43 3 'Structure model' '_struct_conn.ptnr1_label_seq_id' 44 3 'Structure model' '_struct_conn.ptnr1_symmetry' 45 3 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 46 3 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 47 3 'Structure model' '_struct_conn.ptnr2_label_asym_id' 48 3 'Structure model' '_struct_conn.ptnr2_label_atom_id' 49 3 'Structure model' '_struct_conn.ptnr2_label_comp_id' 50 3 'Structure model' '_struct_conn.ptnr2_label_seq_id' 51 3 'Structure model' '_struct_conn.ptnr2_symmetry' 52 3 'Structure model' '_struct_site.pdbx_auth_asym_id' 53 3 'Structure model' '_struct_site.pdbx_auth_comp_id' 54 3 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] 'X-RAY DIFFRACTION' 1 ? refined 17.8190 25.5512 57.4661 0.7106 0.4851 0.5841 0.2165 -0.0044 0.0154 9.7144 8.6422 0.2499 -7.1114 0.9855 -0.2517 -0.1024 0.4717 -0.1950 -0.1274 -0.1059 1.5142 -0.0903 -0.1103 0.2083 'X-RAY DIFFRACTION' 2 ? refined 17.9462 16.7333 72.0421 2.0469 1.5519 0.4267 1.5132 0.2741 0.1527 1.7654 12.8234 0.7605 0.6072 -0.2830 -1.4743 -0.6263 0.2342 0.1460 0.2212 0.9286 1.1553 -0.9654 -1.0206 -0.3024 'X-RAY DIFFRACTION' 3 ? refined 29.7899 16.5263 66.8983 0.4545 0.2068 0.2373 0.0881 0.1338 0.0270 0.9742 4.0969 3.6202 -1.2624 1.3157 -0.1263 -0.1042 -0.1322 -0.0222 0.1730 0.1913 0.4565 -0.5113 -0.3617 -0.0872 'X-RAY DIFFRACTION' 4 ? refined 37.5172 -0.1157 69.6608 0.1973 0.1359 0.0280 0.0359 0.0127 0.0112 2.5598 4.8450 2.8972 0.9680 -0.4422 0.5160 -0.0688 -0.0314 -0.1725 0.0837 0.0981 -0.1455 0.1344 0.0201 -0.0294 'X-RAY DIFFRACTION' 5 ? refined 36.1528 35.2414 70.9341 0.7594 0.6347 0.7342 0.0032 0.0115 0.0128 1.2484 0.9283 22.5698 -0.1673 -5.0580 -0.6586 -0.1697 0.0389 -0.0340 0.6633 0.2254 0.2885 -0.4309 -0.5585 -0.0557 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 'X-RAY DIFFRACTION' 1 1 A 1 ? ? A 34 ? ? ? ? 'X-RAY DIFFRACTION' 2 2 A 35 ? ? A 60 ? ? ? ? 'X-RAY DIFFRACTION' 3 3 A 61 ? ? A 159 ? ? ? ? 'X-RAY DIFFRACTION' 4 4 A 160 ? ? A 302 ? ? ? ? 'X-RAY DIFFRACTION' 5 5 A 303 ? ? A 309 ? ? ? ? # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.7.0032 ? 1 MOSFLM 'data reduction' . ? 2 Aimless 'data scaling' . ? 3 PHASER phasing . ? 4 # _pdbx_entry_details.entry_id 3ZDU _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details '38R: ATP-MIMETIC KINASE INHIBITOR ASC67' _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 O _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 HOH _pdbx_validate_close_contact.auth_seq_id_1 2057 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 HOH _pdbx_validate_close_contact.auth_seq_id_2 2141 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 1.92 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 GLU A 2 ? ? -36.78 121.04 2 1 ARG A 124 ? ? 80.42 3.99 3 1 ASP A 125 ? ? -156.16 47.86 4 1 ASP A 143 ? ? 75.18 92.44 5 1 LEU A 201 ? ? -118.69 55.73 6 1 ARG A 288 ? ? -27.81 -60.03 # _pdbx_distant_solvent_atoms.id 1 _pdbx_distant_solvent_atoms.PDB_model_num 1 _pdbx_distant_solvent_atoms.auth_atom_id O _pdbx_distant_solvent_atoms.label_alt_id ? _pdbx_distant_solvent_atoms.auth_asym_id A _pdbx_distant_solvent_atoms.auth_comp_id HOH _pdbx_distant_solvent_atoms.auth_seq_id 2035 _pdbx_distant_solvent_atoms.PDB_ins_code ? _pdbx_distant_solvent_atoms.neighbor_macromolecule_distance 7.11 _pdbx_distant_solvent_atoms.neighbor_ligand_distance . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A GLU 2 ? CG ? A GLU 3 CG 2 1 Y 1 A GLU 2 ? CD ? A GLU 3 CD 3 1 Y 1 A GLU 2 ? OE1 ? A GLU 3 OE1 4 1 Y 1 A GLU 2 ? OE2 ? A GLU 3 OE2 5 1 Y 1 A SER 14 ? OG ? A SER 15 OG 6 1 Y 1 A LYS 22 ? NZ ? A LYS 23 NZ 7 1 Y 1 A LYS 45 ? CG ? A LYS 46 CG 8 1 Y 1 A LYS 45 ? CD ? A LYS 46 CD 9 1 Y 1 A LYS 45 ? CE ? A LYS 46 CE 10 1 Y 1 A LYS 45 ? NZ ? A LYS 46 NZ 11 1 Y 1 A ARG 49 ? NE ? A ARG 50 NE 12 1 Y 1 A ARG 49 ? CZ ? A ARG 50 CZ 13 1 Y 1 A ARG 49 ? NH1 ? A ARG 50 NH1 14 1 Y 1 A ARG 49 ? NH2 ? A ARG 50 NH2 15 1 Y 1 A LYS 52 ? CE ? A LYS 53 CE 16 1 Y 1 A LYS 52 ? NZ ? A LYS 53 NZ 17 1 Y 1 A LYS 55 ? CG ? A LYS 56 CG 18 1 Y 1 A LYS 55 ? CD ? A LYS 56 CD 19 1 Y 1 A LYS 55 ? CE ? A LYS 56 CE 20 1 Y 1 A LYS 55 ? NZ ? A LYS 56 NZ 21 1 Y 1 A GLN 56 ? CG ? A GLN 57 CG 22 1 Y 1 A GLN 56 ? CD ? A GLN 57 CD 23 1 Y 1 A GLN 56 ? OE1 ? A GLN 57 OE1 24 1 Y 1 A GLN 56 ? NE2 ? A GLN 57 NE2 25 1 Y 1 A ARG 70 ? CG ? A ARG 71 CG 26 1 Y 1 A ARG 70 ? CD ? A ARG 71 CD 27 1 Y 1 A ARG 70 ? NE ? A ARG 71 NE 28 1 Y 1 A ARG 70 ? CZ ? A ARG 71 CZ 29 1 Y 1 A ARG 70 ? NH1 ? A ARG 71 NH1 30 1 Y 1 A ARG 70 ? NH2 ? A ARG 71 NH2 31 1 Y 1 A LYS 72 ? CG ? A LYS 73 CG 32 1 Y 1 A LYS 72 ? CD ? A LYS 73 CD 33 1 Y 1 A LYS 72 ? CE ? A LYS 73 CE 34 1 Y 1 A LYS 72 ? NZ ? A LYS 73 NZ 35 1 Y 1 A LYS 73 ? CG ? A LYS 74 CG 36 1 Y 1 A LYS 73 ? CD ? A LYS 74 CD 37 1 Y 1 A LYS 73 ? CE ? A LYS 74 CE 38 1 Y 1 A LYS 73 ? NZ ? A LYS 74 NZ 39 1 Y 1 A LYS 100 ? CE ? A LYS 101 CE 40 1 Y 1 A LYS 100 ? NZ ? A LYS 101 NZ 41 1 Y 1 A ASP 155 ? CG ? A ASP 156 CG 42 1 Y 1 A ASP 155 ? OD1 ? A ASP 156 OD1 43 1 Y 1 A ASP 155 ? OD2 ? A ASP 156 OD2 44 1 Y 1 A TYR 157 ? CG ? A TYR 158 CG 45 1 Y 1 A TYR 157 ? CD1 ? A TYR 158 CD1 46 1 Y 1 A TYR 157 ? CD2 ? A TYR 158 CD2 47 1 Y 1 A TYR 157 ? CE1 ? A TYR 158 CE1 48 1 Y 1 A TYR 157 ? CE2 ? A TYR 158 CE2 49 1 Y 1 A TYR 157 ? CZ ? A TYR 158 CZ 50 1 Y 1 A TYR 157 ? OH ? A TYR 158 OH 51 1 Y 1 A ASP 159 ? CG ? A ASP 160 CG 52 1 Y 1 A ASP 159 ? OD1 ? A ASP 160 OD1 53 1 Y 1 A ASP 159 ? OD2 ? A ASP 160 OD2 54 1 Y 1 A LYS 212 ? CD ? A LYS 213 CD 55 1 Y 1 A LYS 212 ? CE ? A LYS 213 CE 56 1 Y 1 A LYS 212 ? NZ ? A LYS 213 NZ 57 1 Y 1 A LYS 230 ? CE ? A LYS 231 CE 58 1 Y 1 A LYS 230 ? NZ ? A LYS 231 NZ 59 1 Y 1 A GLN 243 ? CG ? A GLN 244 CG 60 1 Y 1 A GLN 243 ? CD ? A GLN 244 CD 61 1 Y 1 A GLN 243 ? OE1 ? A GLN 244 OE1 62 1 Y 1 A GLN 243 ? NE2 ? A GLN 244 NE2 63 1 Y 1 A LYS 246 ? CE ? A LYS 247 CE 64 1 Y 1 A LYS 246 ? NZ ? A LYS 247 NZ 65 1 Y 1 A LYS 250 ? CD ? A LYS 251 CD 66 1 Y 1 A LYS 250 ? CE ? A LYS 251 CE 67 1 Y 1 A LYS 250 ? NZ ? A LYS 251 NZ 68 1 Y 1 A LYS 254 ? CG ? A LYS 255 CG 69 1 Y 1 A LYS 254 ? CD ? A LYS 255 CD 70 1 Y 1 A LYS 254 ? CE ? A LYS 255 CE 71 1 Y 1 A LYS 254 ? NZ ? A LYS 255 NZ 72 1 Y 1 A ASP 289 ? CG ? A ASP 290 CG 73 1 Y 1 A ASP 289 ? OD1 ? A ASP 290 OD1 74 1 Y 1 A ASP 289 ? OD2 ? A ASP 290 OD2 75 1 Y 1 A LYS 294 ? CE ? A LYS 295 CE 76 1 Y 1 A LYS 294 ? NZ ? A LYS 295 NZ 77 1 Y 1 A LYS 300 ? CG ? A LYS 301 CG 78 1 Y 1 A LYS 300 ? CD ? A LYS 301 CD 79 1 Y 1 A LYS 300 ? CE ? A LYS 301 CE 80 1 Y 1 A LYS 300 ? NZ ? A LYS 301 NZ 81 1 Y 1 A LYS 302 ? CG ? A LYS 303 CG 82 1 Y 1 A LYS 302 ? CD ? A LYS 303 CD 83 1 Y 1 A LYS 302 ? CE ? A LYS 303 CE 84 1 Y 1 A LYS 302 ? NZ ? A LYS 303 NZ 85 1 Y 1 A GLN 305 ? CG ? A GLN 306 CG 86 1 Y 1 A GLN 305 ? CD ? A GLN 306 CD 87 1 Y 1 A GLN 305 ? OE1 ? A GLN 306 OE1 88 1 Y 1 A GLN 305 ? NE2 ? A GLN 306 NE2 89 1 Y 1 A GLU 306 ? CG ? A GLU 307 CG 90 1 Y 1 A GLU 306 ? CD ? A GLU 307 CD 91 1 Y 1 A GLU 306 ? OE1 ? A GLU 307 OE1 92 1 Y 1 A GLU 306 ? OE2 ? A GLU 307 OE2 93 1 Y 1 A LYS 308 ? CG ? A LYS 309 CG 94 1 Y 1 A LYS 308 ? CD ? A LYS 309 CD 95 1 Y 1 A LYS 308 ? CE ? A LYS 309 CE 96 1 Y 1 A LYS 308 ? NZ ? A LYS 309 NZ # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A SER 0 ? A SER 1 2 1 Y 1 A GLU 37 ? A GLU 38 3 1 Y 1 A ARG 38 ? A ARG 39 4 1 Y 1 A PRO 39 ? A PRO 40 5 1 Y 1 A GLU 40 ? A GLU 41 6 1 Y 1 A GLN 41 ? A GLN 42 7 1 Y 1 A SER 42 ? A SER 43 8 1 Y 1 A VAL 43 ? A VAL 44 9 1 Y 1 A LEU 150 ? A LEU 151 10 1 Y 1 A ALA 151 ? A ALA 152 11 1 Y 1 A ALA 152 ? A ALA 153 12 1 Y 1 A PRO 153 ? A PRO 154 13 1 Y 1 A GLY 154 ? A GLY 155 14 1 Y 1 A ASN 310 ? A ASN 311 15 1 Y 1 A SER 311 ? A SER 312 16 1 Y 1 A LEU 312 ? A LEU 313 17 1 Y 1 A ILE 313 ? A ILE 314 18 1 Y 1 A LYS 314 ? A LYS 315 19 1 Y 1 A PRO 315 ? A PRO 316 20 1 Y 1 A LYS 316 ? A LYS 317 21 1 Y 1 A GLU 317 ? A GLU 318 22 1 Y 1 A SER 318 ? A SER 319 23 1 Y 1 A SER 319 ? A SER 320 24 1 Y 1 A LYS 320 ? A LYS 321 25 1 Y 1 A GLU 321 ? A GLU 322 26 1 Y 1 A ASN 322 ? A ASN 323 27 1 Y 1 A GLU 323 ? A GLU 324 28 1 Y 1 A LEU 324 ? A LEU 325 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 38R C4 C Y N 1 38R C5 C Y N 2 38R C6 C Y N 3 38R N1 N Y N 4 38R N3 N Y N 5 38R C1U C N N 6 38R C1T C N N 7 38R C1R C Y N 8 38R C1S C Y N 9 38R N1Q N Y N 10 38R N1P N Y N 11 38R C1H C Y N 12 38R N1G N N N 13 38R C1Y C N N 14 38R C2 C Y N 15 38R N1I N N N 16 38R C1J C Y N 17 38R C1K C Y N 18 38R C1L C Y N 19 38R C1O C Y N 20 38R C1N C Y N 21 38R C1M C Y N 22 38R C1V C N N 23 38R C01 C N N 24 38R C1Z C N N 25 38R C03 C N N 26 38R N1A N N N 27 38R H5 H N N 28 38R H1G H N N 29 38R H6 H N N 30 38R H1U1 H N N 31 38R H1U2 H N N 32 38R H1T H N N 33 38R H011 H N N 34 38R H012 H N N 35 38R H031 H N N 36 38R H032 H N N 37 38R H1S H N N 38 38R H1P H N N 39 38R H1Y1 H N N 40 38R H1Y2 H N N 41 38R H1I H N N 42 38R H1O H N N 43 38R H1K H N N 44 38R H1N H N N 45 38R H1L H N N 46 38R H1V1 H N N 47 38R H1V2 H N N 48 ALA N N N N 49 ALA CA C N S 50 ALA C C N N 51 ALA O O N N 52 ALA CB C N N 53 ALA OXT O N N 54 ALA H H N N 55 ALA H2 H N N 56 ALA HA H N N 57 ALA HB1 H N N 58 ALA HB2 H N N 59 ALA HB3 H N N 60 ALA HXT H N N 61 ARG N N N N 62 ARG CA C N S 63 ARG C C N N 64 ARG O O N N 65 ARG CB C N N 66 ARG CG C N N 67 ARG CD C N N 68 ARG NE N N N 69 ARG CZ C N N 70 ARG NH1 N N N 71 ARG NH2 N N N 72 ARG OXT O N N 73 ARG H H N N 74 ARG H2 H N N 75 ARG HA H N N 76 ARG HB2 H N N 77 ARG HB3 H N N 78 ARG HG2 H N N 79 ARG HG3 H N N 80 ARG HD2 H N N 81 ARG HD3 H N N 82 ARG HE H N N 83 ARG HH11 H N N 84 ARG HH12 H N N 85 ARG HH21 H N N 86 ARG HH22 H N N 87 ARG HXT H N N 88 ASN N N N N 89 ASN CA C N S 90 ASN C C N N 91 ASN O O N N 92 ASN CB C N N 93 ASN CG C N N 94 ASN OD1 O N N 95 ASN ND2 N N N 96 ASN OXT O N N 97 ASN H H N N 98 ASN H2 H N N 99 ASN HA H N N 100 ASN HB2 H N N 101 ASN HB3 H N N 102 ASN HD21 H N N 103 ASN HD22 H N N 104 ASN HXT H N N 105 ASP N N N N 106 ASP CA C N S 107 ASP C C N N 108 ASP O O N N 109 ASP CB C N N 110 ASP CG C N N 111 ASP OD1 O N N 112 ASP OD2 O N N 113 ASP OXT O N N 114 ASP H H N N 115 ASP H2 H N N 116 ASP HA H N N 117 ASP HB2 H N N 118 ASP HB3 H N N 119 ASP HD2 H N N 120 ASP HXT H N N 121 CYS N N N N 122 CYS CA C N R 123 CYS C C N N 124 CYS O O N N 125 CYS CB C N N 126 CYS SG S N N 127 CYS OXT O N N 128 CYS H H N N 129 CYS H2 H N N 130 CYS HA H N N 131 CYS HB2 H N N 132 CYS HB3 H N N 133 CYS HG H N N 134 CYS HXT H N N 135 EDO C1 C N N 136 EDO O1 O N N 137 EDO C2 C N N 138 EDO O2 O N N 139 EDO H11 H N N 140 EDO H12 H N N 141 EDO HO1 H N N 142 EDO H21 H N N 143 EDO H22 H N N 144 EDO HO2 H N N 145 GLN N N N N 146 GLN CA C N S 147 GLN C C N N 148 GLN O O N N 149 GLN CB C N N 150 GLN CG C N N 151 GLN CD C N N 152 GLN OE1 O N N 153 GLN NE2 N N N 154 GLN OXT O N N 155 GLN H H N N 156 GLN H2 H N N 157 GLN HA H N N 158 GLN HB2 H N N 159 GLN HB3 H N N 160 GLN HG2 H N N 161 GLN HG3 H N N 162 GLN HE21 H N N 163 GLN HE22 H N N 164 GLN HXT H N N 165 GLU N N N N 166 GLU CA C N S 167 GLU C C N N 168 GLU O O N N 169 GLU CB C N N 170 GLU CG C N N 171 GLU CD C N N 172 GLU OE1 O N N 173 GLU OE2 O N N 174 GLU OXT O N N 175 GLU H H N N 176 GLU H2 H N N 177 GLU HA H N N 178 GLU HB2 H N N 179 GLU HB3 H N N 180 GLU HG2 H N N 181 GLU HG3 H N N 182 GLU HE2 H N N 183 GLU HXT H N N 184 GLY N N N N 185 GLY CA C N N 186 GLY C C N N 187 GLY O O N N 188 GLY OXT O N N 189 GLY H H N N 190 GLY H2 H N N 191 GLY HA2 H N N 192 GLY HA3 H N N 193 GLY HXT H N N 194 HIS N N N N 195 HIS CA C N S 196 HIS C C N N 197 HIS O O N N 198 HIS CB C N N 199 HIS CG C Y N 200 HIS ND1 N Y N 201 HIS CD2 C Y N 202 HIS CE1 C Y N 203 HIS NE2 N Y N 204 HIS OXT O N N 205 HIS H H N N 206 HIS H2 H N N 207 HIS HA H N N 208 HIS HB2 H N N 209 HIS HB3 H N N 210 HIS HD1 H N N 211 HIS HD2 H N N 212 HIS HE1 H N N 213 HIS HE2 H N N 214 HIS HXT H N N 215 HOH O O N N 216 HOH H1 H N N 217 HOH H2 H N N 218 ILE N N N N 219 ILE CA C N S 220 ILE C C N N 221 ILE O O N N 222 ILE CB C N S 223 ILE CG1 C N N 224 ILE CG2 C N N 225 ILE CD1 C N N 226 ILE OXT O N N 227 ILE H H N N 228 ILE H2 H N N 229 ILE HA H N N 230 ILE HB H N N 231 ILE HG12 H N N 232 ILE HG13 H N N 233 ILE HG21 H N N 234 ILE HG22 H N N 235 ILE HG23 H N N 236 ILE HD11 H N N 237 ILE HD12 H N N 238 ILE HD13 H N N 239 ILE HXT H N N 240 LEU N N N N 241 LEU CA C N S 242 LEU C C N N 243 LEU O O N N 244 LEU CB C N N 245 LEU CG C N N 246 LEU CD1 C N N 247 LEU CD2 C N N 248 LEU OXT O N N 249 LEU H H N N 250 LEU H2 H N N 251 LEU HA H N N 252 LEU HB2 H N N 253 LEU HB3 H N N 254 LEU HG H N N 255 LEU HD11 H N N 256 LEU HD12 H N N 257 LEU HD13 H N N 258 LEU HD21 H N N 259 LEU HD22 H N N 260 LEU HD23 H N N 261 LEU HXT H N N 262 LYS N N N N 263 LYS CA C N S 264 LYS C C N N 265 LYS O O N N 266 LYS CB C N N 267 LYS CG C N N 268 LYS CD C N N 269 LYS CE C N N 270 LYS NZ N N N 271 LYS OXT O N N 272 LYS H H N N 273 LYS H2 H N N 274 LYS HA H N N 275 LYS HB2 H N N 276 LYS HB3 H N N 277 LYS HG2 H N N 278 LYS HG3 H N N 279 LYS HD2 H N N 280 LYS HD3 H N N 281 LYS HE2 H N N 282 LYS HE3 H N N 283 LYS HZ1 H N N 284 LYS HZ2 H N N 285 LYS HZ3 H N N 286 LYS HXT H N N 287 MET N N N N 288 MET CA C N S 289 MET C C N N 290 MET O O N N 291 MET CB C N N 292 MET CG C N N 293 MET SD S N N 294 MET CE C N N 295 MET OXT O N N 296 MET H H N N 297 MET H2 H N N 298 MET HA H N N 299 MET HB2 H N N 300 MET HB3 H N N 301 MET HG2 H N N 302 MET HG3 H N N 303 MET HE1 H N N 304 MET HE2 H N N 305 MET HE3 H N N 306 MET HXT H N N 307 NA NA NA N N 308 PHE N N N N 309 PHE CA C N S 310 PHE C C N N 311 PHE O O N N 312 PHE CB C N N 313 PHE CG C Y N 314 PHE CD1 C Y N 315 PHE CD2 C Y N 316 PHE CE1 C Y N 317 PHE CE2 C Y N 318 PHE CZ C Y N 319 PHE OXT O N N 320 PHE H H N N 321 PHE H2 H N N 322 PHE HA H N N 323 PHE HB2 H N N 324 PHE HB3 H N N 325 PHE HD1 H N N 326 PHE HD2 H N N 327 PHE HE1 H N N 328 PHE HE2 H N N 329 PHE HZ H N N 330 PHE HXT H N N 331 PRO N N N N 332 PRO CA C N S 333 PRO C C N N 334 PRO O O N N 335 PRO CB C N N 336 PRO CG C N N 337 PRO CD C N N 338 PRO OXT O N N 339 PRO H H N N 340 PRO HA H N N 341 PRO HB2 H N N 342 PRO HB3 H N N 343 PRO HG2 H N N 344 PRO HG3 H N N 345 PRO HD2 H N N 346 PRO HD3 H N N 347 PRO HXT H N N 348 SER N N N N 349 SER CA C N S 350 SER C C N N 351 SER O O N N 352 SER CB C N N 353 SER OG O N N 354 SER OXT O N N 355 SER H H N N 356 SER H2 H N N 357 SER HA H N N 358 SER HB2 H N N 359 SER HB3 H N N 360 SER HG H N N 361 SER HXT H N N 362 THR N N N N 363 THR CA C N S 364 THR C C N N 365 THR O O N N 366 THR CB C N R 367 THR OG1 O N N 368 THR CG2 C N N 369 THR OXT O N N 370 THR H H N N 371 THR H2 H N N 372 THR HA H N N 373 THR HB H N N 374 THR HG1 H N N 375 THR HG21 H N N 376 THR HG22 H N N 377 THR HG23 H N N 378 THR HXT H N N 379 TRP N N N N 380 TRP CA C N S 381 TRP C C N N 382 TRP O O N N 383 TRP CB C N N 384 TRP CG C Y N 385 TRP CD1 C Y N 386 TRP CD2 C Y N 387 TRP NE1 N Y N 388 TRP CE2 C Y N 389 TRP CE3 C Y N 390 TRP CZ2 C Y N 391 TRP CZ3 C Y N 392 TRP CH2 C Y N 393 TRP OXT O N N 394 TRP H H N N 395 TRP H2 H N N 396 TRP HA H N N 397 TRP HB2 H N N 398 TRP HB3 H N N 399 TRP HD1 H N N 400 TRP HE1 H N N 401 TRP HE3 H N N 402 TRP HZ2 H N N 403 TRP HZ3 H N N 404 TRP HH2 H N N 405 TRP HXT H N N 406 TYR N N N N 407 TYR CA C N S 408 TYR C C N N 409 TYR O O N N 410 TYR CB C N N 411 TYR CG C Y N 412 TYR CD1 C Y N 413 TYR CD2 C Y N 414 TYR CE1 C Y N 415 TYR CE2 C Y N 416 TYR CZ C Y N 417 TYR OH O N N 418 TYR OXT O N N 419 TYR H H N N 420 TYR H2 H N N 421 TYR HA H N N 422 TYR HB2 H N N 423 TYR HB3 H N N 424 TYR HD1 H N N 425 TYR HD2 H N N 426 TYR HE1 H N N 427 TYR HE2 H N N 428 TYR HH H N N 429 TYR HXT H N N 430 VAL N N N N 431 VAL CA C N S 432 VAL C C N N 433 VAL O O N N 434 VAL CB C N N 435 VAL CG1 C N N 436 VAL CG2 C N N 437 VAL OXT O N N 438 VAL H H N N 439 VAL H2 H N N 440 VAL HA H N N 441 VAL HB H N N 442 VAL HG11 H N N 443 VAL HG12 H N N 444 VAL HG13 H N N 445 VAL HG21 H N N 446 VAL HG22 H N N 447 VAL HG23 H N N 448 VAL HXT H N N 449 ZN ZN ZN N N 450 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 38R C4 C5 doub Y N 1 38R C4 N3 sing Y N 2 38R C4 N1G sing N N 3 38R C5 C6 sing Y N 4 38R C6 N1 doub Y N 5 38R N1 C2 sing Y N 6 38R N3 C2 doub Y N 7 38R C1U C1T sing N N 8 38R C1U C01 sing N N 9 38R C1T C1R sing N N 10 38R C1T C03 sing N N 11 38R C1R C1S sing Y N 12 38R C1R N1Q doub Y N 13 38R C1S C1H doub Y N 14 38R N1Q N1P sing Y N 15 38R N1P C1H sing Y N 16 38R C1H N1G sing N N 17 38R C1Y C01 sing N N 18 38R C1Y C03 sing N N 19 38R C2 N1I sing N N 20 38R N1I C1J sing N N 21 38R C1J C1O doub Y N 22 38R C1J C1K sing Y N 23 38R C1O C1N sing Y N 24 38R C1N C1M doub Y N 25 38R C1K C1L doub Y N 26 38R C1L C1M sing Y N 27 38R C1M C1V sing N N 28 38R C1V C1Z sing N N 29 38R C1Z N1A trip N N 30 38R C5 H5 sing N N 31 38R N1G H1G sing N N 32 38R C6 H6 sing N N 33 38R C1U H1U1 sing N N 34 38R C1U H1U2 sing N N 35 38R C1T H1T sing N N 36 38R C01 H011 sing N N 37 38R C01 H012 sing N N 38 38R C03 H031 sing N N 39 38R C03 H032 sing N N 40 38R C1S H1S sing N N 41 38R N1P H1P sing N N 42 38R C1Y H1Y1 sing N N 43 38R C1Y H1Y2 sing N N 44 38R N1I H1I sing N N 45 38R C1O H1O sing N N 46 38R C1K H1K sing N N 47 38R C1N H1N sing N N 48 38R C1L H1L sing N N 49 38R C1V H1V1 sing N N 50 38R C1V H1V2 sing N N 51 ALA N CA sing N N 52 ALA N H sing N N 53 ALA N H2 sing N N 54 ALA CA C sing N N 55 ALA CA CB sing N N 56 ALA CA HA sing N N 57 ALA C O doub N N 58 ALA C OXT sing N N 59 ALA CB HB1 sing N N 60 ALA CB HB2 sing N N 61 ALA CB HB3 sing N N 62 ALA OXT HXT sing N N 63 ARG N CA sing N N 64 ARG N H sing N N 65 ARG N H2 sing N N 66 ARG CA C sing N N 67 ARG CA CB sing N N 68 ARG CA HA sing N N 69 ARG C O doub N N 70 ARG C OXT sing N N 71 ARG CB CG sing N N 72 ARG CB HB2 sing N N 73 ARG CB HB3 sing N N 74 ARG CG CD sing N N 75 ARG CG HG2 sing N N 76 ARG CG HG3 sing N N 77 ARG CD NE sing N N 78 ARG CD HD2 sing N N 79 ARG CD HD3 sing N N 80 ARG NE CZ sing N N 81 ARG NE HE sing N N 82 ARG CZ NH1 sing N N 83 ARG CZ NH2 doub N N 84 ARG NH1 HH11 sing N N 85 ARG NH1 HH12 sing N N 86 ARG NH2 HH21 sing N N 87 ARG NH2 HH22 sing N N 88 ARG OXT HXT sing N N 89 ASN N CA sing N N 90 ASN N H sing N N 91 ASN N H2 sing N N 92 ASN CA C sing N N 93 ASN CA CB sing N N 94 ASN CA HA sing N N 95 ASN C O doub N N 96 ASN C OXT sing N N 97 ASN CB CG sing N N 98 ASN CB HB2 sing N N 99 ASN CB HB3 sing N N 100 ASN CG OD1 doub N N 101 ASN CG ND2 sing N N 102 ASN ND2 HD21 sing N N 103 ASN ND2 HD22 sing N N 104 ASN OXT HXT sing N N 105 ASP N CA sing N N 106 ASP N H sing N N 107 ASP N H2 sing N N 108 ASP CA C sing N N 109 ASP CA CB sing N N 110 ASP CA HA sing N N 111 ASP C O doub N N 112 ASP C OXT sing N N 113 ASP CB CG sing N N 114 ASP CB HB2 sing N N 115 ASP CB HB3 sing N N 116 ASP CG OD1 doub N N 117 ASP CG OD2 sing N N 118 ASP OD2 HD2 sing N N 119 ASP OXT HXT sing N N 120 CYS N CA sing N N 121 CYS N H sing N N 122 CYS N H2 sing N N 123 CYS CA C sing N N 124 CYS CA CB sing N N 125 CYS CA HA sing N N 126 CYS C O doub N N 127 CYS C OXT sing N N 128 CYS CB SG sing N N 129 CYS CB HB2 sing N N 130 CYS CB HB3 sing N N 131 CYS SG HG sing N N 132 CYS OXT HXT sing N N 133 EDO C1 O1 sing N N 134 EDO C1 C2 sing N N 135 EDO C1 H11 sing N N 136 EDO C1 H12 sing N N 137 EDO O1 HO1 sing N N 138 EDO C2 O2 sing N N 139 EDO C2 H21 sing N N 140 EDO C2 H22 sing N N 141 EDO O2 HO2 sing N N 142 GLN N CA sing N N 143 GLN N H sing N N 144 GLN N H2 sing N N 145 GLN CA C sing N N 146 GLN CA CB sing N N 147 GLN CA HA sing N N 148 GLN C O doub N N 149 GLN C OXT sing N N 150 GLN CB CG sing N N 151 GLN CB HB2 sing N N 152 GLN CB HB3 sing N N 153 GLN CG CD sing N N 154 GLN CG HG2 sing N N 155 GLN CG HG3 sing N N 156 GLN CD OE1 doub N N 157 GLN CD NE2 sing N N 158 GLN NE2 HE21 sing N N 159 GLN NE2 HE22 sing N N 160 GLN OXT HXT sing N N 161 GLU N CA sing N N 162 GLU N H sing N N 163 GLU N H2 sing N N 164 GLU CA C sing N N 165 GLU CA CB sing N N 166 GLU CA HA sing N N 167 GLU C O doub N N 168 GLU C OXT sing N N 169 GLU CB CG sing N N 170 GLU CB HB2 sing N N 171 GLU CB HB3 sing N N 172 GLU CG CD sing N N 173 GLU CG HG2 sing N N 174 GLU CG HG3 sing N N 175 GLU CD OE1 doub N N 176 GLU CD OE2 sing N N 177 GLU OE2 HE2 sing N N 178 GLU OXT HXT sing N N 179 GLY N CA sing N N 180 GLY N H sing N N 181 GLY N H2 sing N N 182 GLY CA C sing N N 183 GLY CA HA2 sing N N 184 GLY CA HA3 sing N N 185 GLY C O doub N N 186 GLY C OXT sing N N 187 GLY OXT HXT sing N N 188 HIS N CA sing N N 189 HIS N H sing N N 190 HIS N H2 sing N N 191 HIS CA C sing N N 192 HIS CA CB sing N N 193 HIS CA HA sing N N 194 HIS C O doub N N 195 HIS C OXT sing N N 196 HIS CB CG sing N N 197 HIS CB HB2 sing N N 198 HIS CB HB3 sing N N 199 HIS CG ND1 sing Y N 200 HIS CG CD2 doub Y N 201 HIS ND1 CE1 doub Y N 202 HIS ND1 HD1 sing N N 203 HIS CD2 NE2 sing Y N 204 HIS CD2 HD2 sing N N 205 HIS CE1 NE2 sing Y N 206 HIS CE1 HE1 sing N N 207 HIS NE2 HE2 sing N N 208 HIS OXT HXT sing N N 209 HOH O H1 sing N N 210 HOH O H2 sing N N 211 ILE N CA sing N N 212 ILE N H sing N N 213 ILE N H2 sing N N 214 ILE CA C sing N N 215 ILE CA CB sing N N 216 ILE CA HA sing N N 217 ILE C O doub N N 218 ILE C OXT sing N N 219 ILE CB CG1 sing N N 220 ILE CB CG2 sing N N 221 ILE CB HB sing N N 222 ILE CG1 CD1 sing N N 223 ILE CG1 HG12 sing N N 224 ILE CG1 HG13 sing N N 225 ILE CG2 HG21 sing N N 226 ILE CG2 HG22 sing N N 227 ILE CG2 HG23 sing N N 228 ILE CD1 HD11 sing N N 229 ILE CD1 HD12 sing N N 230 ILE CD1 HD13 sing N N 231 ILE OXT HXT sing N N 232 LEU N CA sing N N 233 LEU N H sing N N 234 LEU N H2 sing N N 235 LEU CA C sing N N 236 LEU CA CB sing N N 237 LEU CA HA sing N N 238 LEU C O doub N N 239 LEU C OXT sing N N 240 LEU CB CG sing N N 241 LEU CB HB2 sing N N 242 LEU CB HB3 sing N N 243 LEU CG CD1 sing N N 244 LEU CG CD2 sing N N 245 LEU CG HG sing N N 246 LEU CD1 HD11 sing N N 247 LEU CD1 HD12 sing N N 248 LEU CD1 HD13 sing N N 249 LEU CD2 HD21 sing N N 250 LEU CD2 HD22 sing N N 251 LEU CD2 HD23 sing N N 252 LEU OXT HXT sing N N 253 LYS N CA sing N N 254 LYS N H sing N N 255 LYS N H2 sing N N 256 LYS CA C sing N N 257 LYS CA CB sing N N 258 LYS CA HA sing N N 259 LYS C O doub N N 260 LYS C OXT sing N N 261 LYS CB CG sing N N 262 LYS CB HB2 sing N N 263 LYS CB HB3 sing N N 264 LYS CG CD sing N N 265 LYS CG HG2 sing N N 266 LYS CG HG3 sing N N 267 LYS CD CE sing N N 268 LYS CD HD2 sing N N 269 LYS CD HD3 sing N N 270 LYS CE NZ sing N N 271 LYS CE HE2 sing N N 272 LYS CE HE3 sing N N 273 LYS NZ HZ1 sing N N 274 LYS NZ HZ2 sing N N 275 LYS NZ HZ3 sing N N 276 LYS OXT HXT sing N N 277 MET N CA sing N N 278 MET N H sing N N 279 MET N H2 sing N N 280 MET CA C sing N N 281 MET CA CB sing N N 282 MET CA HA sing N N 283 MET C O doub N N 284 MET C OXT sing N N 285 MET CB CG sing N N 286 MET CB HB2 sing N N 287 MET CB HB3 sing N N 288 MET CG SD sing N N 289 MET CG HG2 sing N N 290 MET CG HG3 sing N N 291 MET SD CE sing N N 292 MET CE HE1 sing N N 293 MET CE HE2 sing N N 294 MET CE HE3 sing N N 295 MET OXT HXT sing N N 296 PHE N CA sing N N 297 PHE N H sing N N 298 PHE N H2 sing N N 299 PHE CA C sing N N 300 PHE CA CB sing N N 301 PHE CA HA sing N N 302 PHE C O doub N N 303 PHE C OXT sing N N 304 PHE CB CG sing N N 305 PHE CB HB2 sing N N 306 PHE CB HB3 sing N N 307 PHE CG CD1 doub Y N 308 PHE CG CD2 sing Y N 309 PHE CD1 CE1 sing Y N 310 PHE CD1 HD1 sing N N 311 PHE CD2 CE2 doub Y N 312 PHE CD2 HD2 sing N N 313 PHE CE1 CZ doub Y N 314 PHE CE1 HE1 sing N N 315 PHE CE2 CZ sing Y N 316 PHE CE2 HE2 sing N N 317 PHE CZ HZ sing N N 318 PHE OXT HXT sing N N 319 PRO N CA sing N N 320 PRO N CD sing N N 321 PRO N H sing N N 322 PRO CA C sing N N 323 PRO CA CB sing N N 324 PRO CA HA sing N N 325 PRO C O doub N N 326 PRO C OXT sing N N 327 PRO CB CG sing N N 328 PRO CB HB2 sing N N 329 PRO CB HB3 sing N N 330 PRO CG CD sing N N 331 PRO CG HG2 sing N N 332 PRO CG HG3 sing N N 333 PRO CD HD2 sing N N 334 PRO CD HD3 sing N N 335 PRO OXT HXT sing N N 336 SER N CA sing N N 337 SER N H sing N N 338 SER N H2 sing N N 339 SER CA C sing N N 340 SER CA CB sing N N 341 SER CA HA sing N N 342 SER C O doub N N 343 SER C OXT sing N N 344 SER CB OG sing N N 345 SER CB HB2 sing N N 346 SER CB HB3 sing N N 347 SER OG HG sing N N 348 SER OXT HXT sing N N 349 THR N CA sing N N 350 THR N H sing N N 351 THR N H2 sing N N 352 THR CA C sing N N 353 THR CA CB sing N N 354 THR CA HA sing N N 355 THR C O doub N N 356 THR C OXT sing N N 357 THR CB OG1 sing N N 358 THR CB CG2 sing N N 359 THR CB HB sing N N 360 THR OG1 HG1 sing N N 361 THR CG2 HG21 sing N N 362 THR CG2 HG22 sing N N 363 THR CG2 HG23 sing N N 364 THR OXT HXT sing N N 365 TRP N CA sing N N 366 TRP N H sing N N 367 TRP N H2 sing N N 368 TRP CA C sing N N 369 TRP CA CB sing N N 370 TRP CA HA sing N N 371 TRP C O doub N N 372 TRP C OXT sing N N 373 TRP CB CG sing N N 374 TRP CB HB2 sing N N 375 TRP CB HB3 sing N N 376 TRP CG CD1 doub Y N 377 TRP CG CD2 sing Y N 378 TRP CD1 NE1 sing Y N 379 TRP CD1 HD1 sing N N 380 TRP CD2 CE2 doub Y N 381 TRP CD2 CE3 sing Y N 382 TRP NE1 CE2 sing Y N 383 TRP NE1 HE1 sing N N 384 TRP CE2 CZ2 sing Y N 385 TRP CE3 CZ3 doub Y N 386 TRP CE3 HE3 sing N N 387 TRP CZ2 CH2 doub Y N 388 TRP CZ2 HZ2 sing N N 389 TRP CZ3 CH2 sing Y N 390 TRP CZ3 HZ3 sing N N 391 TRP CH2 HH2 sing N N 392 TRP OXT HXT sing N N 393 TYR N CA sing N N 394 TYR N H sing N N 395 TYR N H2 sing N N 396 TYR CA C sing N N 397 TYR CA CB sing N N 398 TYR CA HA sing N N 399 TYR C O doub N N 400 TYR C OXT sing N N 401 TYR CB CG sing N N 402 TYR CB HB2 sing N N 403 TYR CB HB3 sing N N 404 TYR CG CD1 doub Y N 405 TYR CG CD2 sing Y N 406 TYR CD1 CE1 sing Y N 407 TYR CD1 HD1 sing N N 408 TYR CD2 CE2 doub Y N 409 TYR CD2 HD2 sing N N 410 TYR CE1 CZ doub Y N 411 TYR CE1 HE1 sing N N 412 TYR CE2 CZ sing Y N 413 TYR CE2 HE2 sing N N 414 TYR CZ OH sing N N 415 TYR OH HH sing N N 416 TYR OXT HXT sing N N 417 VAL N CA sing N N 418 VAL N H sing N N 419 VAL N H2 sing N N 420 VAL CA C sing N N 421 VAL CA CB sing N N 422 VAL CA HA sing N N 423 VAL C O doub N N 424 VAL C OXT sing N N 425 VAL CB CG1 sing N N 426 VAL CB CG2 sing N N 427 VAL CB HB sing N N 428 VAL CG1 HG11 sing N N 429 VAL CG1 HG12 sing N N 430 VAL CG1 HG13 sing N N 431 VAL CG2 HG21 sing N N 432 VAL CG2 HG22 sing N N 433 VAL CG2 HG23 sing N N 434 VAL OXT HXT sing N N 435 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 '[4-({4-[(3-cyclopentyl-1H-pyrazol-5-yl)amino]pyrimidin-2-yl}amino)phenyl]acetonitrile' 38R 3 'ZINC ION' ZN 4 'SODIUM ION' NA 5 1,2-ETHANEDIOL EDO 6 water HOH # loop_ _pdbx_initial_refinement_model.id _pdbx_initial_refinement_model.entity_id_list _pdbx_initial_refinement_model.type _pdbx_initial_refinement_model.source_name _pdbx_initial_refinement_model.accession_code _pdbx_initial_refinement_model.details 1 ? 'experimental model' PDB 4AGU 'ENSEMBLE OF PDB ENTRIES 4AGU AND 4AAA' 2 ? 'experimental model' PDB 4AAA 'ENSEMBLE OF PDB ENTRIES 4AGU AND 4AAA' #