HEADER HYDROLASE 11-DEC-12 3ZFD TITLE CRYSTAL STRUCTURE OF THE KIF4 MOTOR DOMAIN COMPLEXED WITH MG-AMPPNP COMPND MOL_ID: 1; COMPND 2 MOLECULE: CHROMOSOME-ASSOCIATED KINESIN KIF4; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: MOTOR DOMAIN, RESIDUES 1-344; COMPND 5 SYNONYM: CHROMOKINESIN, KINESIN-LIKE PROTEIN KIF4; COMPND 6 EC: 3.6.4.4; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: HOUSE MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 STRAIN: ICR; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_VECTOR: PET21B KEYWDS HYDROLASE, MOLECULAR MOTOR, ATPASE, MICROTUBULE EXPDTA X-RAY DIFFRACTION AUTHOR Q.CHANG,R.NITTA,S.INOUE,N.HIROKAWA REVDAT 4 20-DEC-23 3ZFD 1 REMARK LINK REVDAT 3 29-MAY-13 3ZFD 1 JRNL REVDAT 2 03-APR-13 3ZFD 1 JRNL REVDAT 1 20-MAR-13 3ZFD 0 JRNL AUTH Q.CHANG,R.NITTA,S.INOUE,N.HIROKAWA JRNL TITL STRUCTURAL BASIS FOR THE ATP-INDUCED ISOMERIZATION OF JRNL TITL 2 KINESIN. JRNL REF J.MOL.BIOL. V. 425 1869 2013 JRNL REFN ISSN 0022-2836 JRNL PMID 23500491 JRNL DOI 10.1016/J.JMB.2013.03.004 REMARK 2 REMARK 2 RESOLUTION. 1.71 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.7.0029 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.71 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 44.35 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 3 NUMBER OF REFLECTIONS : 35129 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.168 REMARK 3 R VALUE (WORKING SET) : 0.166 REMARK 3 FREE R VALUE : 0.195 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1846 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.71 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.75 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2300 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 90.32 REMARK 3 BIN R VALUE (WORKING SET) : 0.2190 REMARK 3 BIN FREE R VALUE SET COUNT : 116 REMARK 3 BIN FREE R VALUE : 0.2890 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2516 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 32 REMARK 3 SOLVENT ATOMS : 249 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 15.21 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.00000 REMARK 3 B22 (A**2) : 0.00000 REMARK 3 B33 (A**2) : 0.00000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.099 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.096 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.057 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.706 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.956 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.942 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2586 ; 0.010 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 2508 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3513 ; 1.425 ; 1.974 REMARK 3 BOND ANGLES OTHERS (DEGREES): 5748 ; 0.773 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 338 ; 6.213 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 100 ;30.073 ;24.000 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 419 ;12.462 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 16 ;17.972 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 417 ; 0.092 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2951 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 578 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. U VALUES REFINED INDIVIDUALLY REMARK 4 REMARK 4 3ZFD COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 11-DEC-12. REMARK 100 THE DEPOSITION ID IS D_1290055081. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 25-APR-12 REMARK 200 TEMPERATURE (KELVIN) : 95 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 2 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SPRING-8 REMARK 200 BEAMLINE : BL41XU REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 37057 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.710 REMARK 200 RESOLUTION RANGE LOW (A) : 44.350 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 200 DATA REDUNDANCY : 11.80 REMARK 200 R MERGE (I) : 0.09000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 21.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : 95.0 REMARK 200 DATA REDUNDANCY IN SHELL : 5.10 REMARK 200 R MERGE FOR SHELL (I) : 0.49000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 3HQD REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 41.72 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.11 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PH 8.5 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 83.76200 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 31.35900 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 31.35900 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 41.88100 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 31.35900 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 31.35900 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 125.64300 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 31.35900 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 31.35900 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 41.88100 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 31.35900 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 31.35900 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 125.64300 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 83.76200 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 LYS A 2 REMARK 465 GLU A 3 REMARK 465 SER A 155 REMARK 465 ARG A 156 REMARK 465 GLU A 157 REMARK 465 LYS A 158 REMARK 465 ALA A 159 REMARK 465 HIS A 349 REMARK 465 HIS A 350 REMARK 465 HIS A 351 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 4 CG CD OE1 OE2 REMARK 470 VAL A 5 CG1 CG2 REMARK 470 LYS A 6 CG CD CE NZ REMARK 470 LYS A 25 CG CD CE NZ REMARK 470 GLN A 29 CG CD OE1 NE2 REMARK 470 GLU A 38 CG CD OE1 OE2 REMARK 470 GLN A 40 CG CD OE1 NE2 REMARK 470 ASN A 45 CG OD1 ND2 REMARK 470 ASP A 46 CG OD1 OD2 REMARK 470 LYS A 47 CG CD CE NZ REMARK 470 GLU A 60 CG CD OE1 OE2 REMARK 470 LYS A 124 CG CD CE NZ REMARK 470 ASP A 131 CG OD1 OD2 REMARK 470 GLU A 133 CG CD OE1 OE2 REMARK 470 GLU A 146 CG CD OE1 OE2 REMARK 470 GLU A 147 CG CD OE1 OE2 REMARK 470 SER A 154 OG REMARK 470 THR A 160 OG1 CG2 REMARK 470 ARG A 165 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 166 CG CD OE1 OE2 REMARK 470 ASP A 167 CG OD1 OD2 REMARK 470 LYS A 169 CG CD CE NZ REMARK 470 GLU A 170 CG CD OE1 OE2 REMARK 470 ILE A 172 CG1 CG2 CD1 REMARK 470 LYS A 173 CG CD CE NZ REMARK 470 LYS A 226 CG CD CE NZ REMARK 470 ASN A 227 CG OD1 ND2 REMARK 470 LYS A 229 CG CD CE NZ REMARK 470 LYS A 249 CG CD CE NZ REMARK 470 GLU A 254 CG CD OE1 OE2 REMARK 470 ASP A 280 CG OD1 OD2 REMARK 470 LYS A 283 CG CD CE NZ REMARK 470 ARG A 290 CG CD NE CZ NH1 NH2 REMARK 470 HIS A 348 CG ND1 CD2 CE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 46 -56.42 -145.53 REMARK 500 LYS A 169 52.97 -91.10 REMARK 500 GLU A 170 102.60 95.06 REMARK 500 ASN A 207 115.87 -160.63 REMARK 500 ASP A 228 88.39 -161.96 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 500 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 THR A 95 OG1 REMARK 620 2 SER A 211 OG 85.1 REMARK 620 3 ANP A 501 O2B 90.6 174.3 REMARK 620 4 ANP A 501 O1G 174.8 89.9 94.3 REMARK 620 5 HOH A2082 O 86.7 88.2 87.9 91.8 REMARK 620 6 HOH A2083 O 83.5 89.7 93.5 97.8 170.1 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 500 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ANP A 501 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3ZFC RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE KIF4 MOTOR DOMAIN COMPLEXED WITH MG-AMPPNP DBREF 3ZFD A 1 344 UNP P33174 KIF4_MOUSE 1 344 SEQADV 3ZFD HIS A 345 UNP P33174 EXPRESSION TAG SEQADV 3ZFD HIS A 346 UNP P33174 EXPRESSION TAG SEQADV 3ZFD HIS A 347 UNP P33174 EXPRESSION TAG SEQADV 3ZFD HIS A 348 UNP P33174 EXPRESSION TAG SEQADV 3ZFD HIS A 349 UNP P33174 EXPRESSION TAG SEQADV 3ZFD HIS A 350 UNP P33174 EXPRESSION TAG SEQADV 3ZFD HIS A 351 UNP P33174 EXPRESSION TAG SEQRES 1 A 351 MET LYS GLU GLU VAL LYS GLY ILE PRO VAL ARG VAL ALA SEQRES 2 A 351 LEU ARG CYS ARG PRO LEU VAL SER LYS GLU ILE LYS GLU SEQRES 3 A 351 GLY CYS GLN THR CYS LEU SER PHE VAL PRO GLY GLU PRO SEQRES 4 A 351 GLN VAL VAL VAL GLY ASN ASP LYS SER PHE THR TYR ASP SEQRES 5 A 351 PHE VAL PHE ASP PRO SER THR GLU GLN GLU GLU VAL PHE SEQRES 6 A 351 ASN THR ALA VAL ALA PRO LEU ILE LYS GLY VAL PHE LYS SEQRES 7 A 351 GLY TYR ASN ALA THR VAL LEU ALA TYR GLY GLN THR GLY SEQRES 8 A 351 SER GLY LYS THR TYR SER MET GLY GLY ALA TYR THR ALA SEQRES 9 A 351 GLU GLN GLU HIS ASP SER ALA ILE GLY VAL ILE PRO ARG SEQRES 10 A 351 VAL ILE GLN LEU LEU PHE LYS GLU ILE ASN LYS LYS SER SEQRES 11 A 351 ASP PHE GLU PHE THR LEU LYS VAL SER TYR LEU GLU ILE SEQRES 12 A 351 TYR ASN GLU GLU ILE LEU ASP LEU LEU CYS SER SER ARG SEQRES 13 A 351 GLU LYS ALA THR GLN ILE ASN ILE ARG GLU ASP PRO LYS SEQRES 14 A 351 GLU GLY ILE LYS ILE VAL GLY LEU THR GLU LYS THR VAL SEQRES 15 A 351 LEU VAL ALA SER ASP THR VAL SER CYS LEU GLU GLN GLY SEQRES 16 A 351 ASN ASN SER ARG THR VAL ALA SER THR ALA MET ASN SER SEQRES 17 A 351 GLN SER SER ARG SER HIS ALA ILE PHE THR ILE SER ILE SEQRES 18 A 351 GLU GLN ARG LYS LYS ASN ASP LYS ASN SER SER PHE ARG SEQRES 19 A 351 SER LYS LEU HIS LEU VAL ASP LEU ALA GLY SER GLU ARG SEQRES 20 A 351 GLN LYS LYS THR LYS ALA GLU GLY ASP ARG LEU ARG GLU SEQRES 21 A 351 GLY ILE ASN ILE ASN ARG GLY LEU LEU CYS LEU GLY ASN SEQRES 22 A 351 VAL ILE SER ALA LEU GLY ASP ASP LYS LYS GLY ASN PHE SEQRES 23 A 351 VAL PRO TYR ARG ASP SER LYS LEU THR ARG LEU LEU GLN SEQRES 24 A 351 ASP SER LEU GLY GLY ASN SER HIS THR LEU MET ILE ALA SEQRES 25 A 351 CYS VAL SER PRO ALA ASP SER ASN LEU GLU GLU THR LEU SEQRES 26 A 351 ASN THR LEU ARG TYR ALA ASP ARG ALA ARG LYS ILE LYS SEQRES 27 A 351 ASN LYS PRO ILE ILE ASN HIS HIS HIS HIS HIS HIS HIS HET MG A 500 1 HET ANP A 501 31 HETNAM MG MAGNESIUM ION HETNAM ANP PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER FORMUL 2 MG MG 2+ FORMUL 3 ANP C10 H17 N6 O12 P3 FORMUL 4 HOH *249(H2 O) HELIX 1 1 VAL A 20 GLU A 26 1 7 HELIX 2 2 GLU A 60 VAL A 69 1 10 HELIX 3 3 VAL A 69 PHE A 77 1 9 HELIX 4 4 GLY A 93 GLY A 99 1 7 HELIX 5 5 THR A 103 GLU A 107 5 5 HELIX 6 6 GLY A 113 LYS A 129 1 17 HELIX 7 7 VAL A 184 ARG A 199 1 16 HELIX 8 8 ARG A 247 LYS A 252 1 6 HELIX 9 9 GLU A 254 ASP A 280 1 27 HELIX 10 10 PRO A 288 ASP A 291 5 4 HELIX 11 11 SER A 292 LEU A 298 1 7 HELIX 12 12 ASN A 320 ARG A 335 1 16 SHEET 1 AA 2 ILE A 8 PRO A 9 0 SHEET 2 AA 2 LYS A 338 ASN A 339 -1 O ASN A 339 N ILE A 8 SHEET 1 AB 6 PHE A 53 PHE A 55 0 SHEET 2 AB 6 ARG A 11 CYS A 16 1 O LEU A 14 N PHE A 55 SHEET 3 AB 6 HIS A 307 VAL A 314 1 O THR A 308 N ARG A 11 SHEET 4 AB 6 ALA A 82 TYR A 87 1 O THR A 83 N LEU A 309 SHEET 5 AB 6 ASP A 228 ASP A 241 1 O LYS A 236 N ALA A 82 SHEET 6 AB 6 HIS A 345 HIS A 347 -1 O HIS A 346 N SER A 232 SHEET 1 AC 8 PHE A 53 PHE A 55 0 SHEET 2 AC 8 ARG A 11 CYS A 16 1 O LEU A 14 N PHE A 55 SHEET 3 AC 8 HIS A 307 VAL A 314 1 O THR A 308 N ARG A 11 SHEET 4 AC 8 ALA A 82 TYR A 87 1 O THR A 83 N LEU A 309 SHEET 5 AC 8 ASP A 228 ASP A 241 1 O LYS A 236 N ALA A 82 SHEET 6 AC 8 HIS A 214 LYS A 225 -1 O ALA A 215 N ASP A 241 SHEET 7 AC 8 PHE A 132 TYR A 144 -1 O GLU A 133 N ARG A 224 SHEET 8 AC 8 GLU A 147 ASP A 150 -1 O GLU A 147 N TYR A 144 SHEET 1 AD 8 PHE A 53 PHE A 55 0 SHEET 2 AD 8 ARG A 11 CYS A 16 1 O LEU A 14 N PHE A 55 SHEET 3 AD 8 HIS A 307 VAL A 314 1 O THR A 308 N ARG A 11 SHEET 4 AD 8 ALA A 82 TYR A 87 1 O THR A 83 N LEU A 309 SHEET 5 AD 8 ASP A 228 ASP A 241 1 O LYS A 236 N ALA A 82 SHEET 6 AD 8 HIS A 214 LYS A 225 -1 O ALA A 215 N ASP A 241 SHEET 7 AD 8 PHE A 132 TYR A 144 -1 O GLU A 133 N ARG A 224 SHEET 8 AD 8 LYS A 180 VAL A 182 -1 O LYS A 180 N VAL A 138 SHEET 1 AE 2 GLU A 147 ASP A 150 0 SHEET 2 AE 2 PHE A 132 TYR A 144 -1 O GLU A 142 N LEU A 149 SHEET 1 AF 2 HIS A 345 HIS A 347 0 SHEET 2 AF 2 ASP A 228 ASP A 241 -1 O SER A 232 N HIS A 346 SHEET 1 AG 3 LEU A 32 PHE A 34 0 SHEET 2 AG 3 GLN A 40 VAL A 43 -1 O VAL A 42 N SER A 33 SHEET 3 AG 3 LYS A 47 THR A 50 -1 O LYS A 47 N VAL A 43 SHEET 1 AH 2 ASN A 163 GLU A 166 0 SHEET 2 AH 2 ILE A 172 VAL A 175 -1 O LYS A 173 N ARG A 165 SHEET 1 AI 2 VAL A 201 THR A 204 0 SHEET 2 AI 2 ASN A 207 SER A 211 -1 O ASN A 207 N THR A 204 LINK OG1 THR A 95 MG MG A 500 1555 1555 2.13 LINK OG SER A 211 MG MG A 500 1555 1555 2.12 LINK MG MG A 500 O2B ANP A 501 1555 1555 2.04 LINK MG MG A 500 O1G ANP A 501 1555 1555 1.98 LINK MG MG A 500 O HOH A2082 1555 1555 2.11 LINK MG MG A 500 O HOH A2083 1555 1555 2.13 SITE 1 AC1 5 THR A 95 SER A 211 ANP A 501 HOH A2082 SITE 2 AC1 5 HOH A2083 SITE 1 AC2 25 ARG A 15 ARG A 17 PRO A 18 THR A 90 SITE 2 AC2 25 GLY A 91 SER A 92 GLY A 93 LYS A 94 SITE 3 AC2 25 THR A 95 TYR A 96 ASN A 207 SER A 210 SITE 4 AC2 25 SER A 211 GLY A 244 MG A 500 HOH A2012 SITE 5 AC2 25 HOH A2016 HOH A2082 HOH A2083 HOH A2169 SITE 6 AC2 25 HOH A2172 HOH A2244 HOH A2246 HOH A2247 SITE 7 AC2 25 HOH A2248 CRYST1 62.718 62.718 167.524 90.00 90.00 90.00 P 41 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015944 0.000000 0.000000 0.00000 SCALE2 0.000000 0.015944 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005969 0.00000