HEADER OXIDOREDUCTASE 18-DEC-12 3ZGN TITLE CRYSTAL STRUCTURES OF ESCHERICHIA COLI ISPH IN COMPLEX WITH TMBPP A TITLE 2 POTENT INHIBITOR OF THE METHYLERYTHRITOL PHOSPHATE PATHWAY COMPND MOL_ID: 1; COMPND 2 MOLECULE: 4-HYDROXY-3-METHYLBUT-2-ENYL DIPHOSPHATE REDUCTASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: ISPH, 4-HYDROXY-3-METHYLBUT-2-ENYL DIPHOSPHATE REDUCTASE COMPND 5 (E)-4-MERCAPTO-3-METHYL-BUT-2-EN- 1-YL DIPHOSPHATE; COMPND 6 EC: 1.17.1.2; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 562; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI M15; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 1007065; SOURCE 6 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 7 EXPRESSION_SYSTEM_VECTOR: PQE30 KEYWDS OXIDOREDUCTASE, MEP PATHWAY, INHIBITORS, 4FE-4S CLUSTER EXPDTA X-RAY DIFFRACTION AUTHOR F.BOREL,E.BARBIER,S.KRATSUTSKY,K.JANTHAWORNPONG,M.ROHMER,C.DALE AUTHOR 2 POULTER,J.L.FERRER,M.SEEMANN REVDAT 3 20-DEC-23 3ZGN 1 REMARK LINK REVDAT 2 29-NOV-17 3ZGN 1 JRNL REVDAT 1 09-JAN-13 3ZGN 0 JRNL AUTH F.BOREL,E.BARBIER,S.KRASUTSKY,K.JANTHAWORNPONG,P.CHAIGNON, JRNL AUTH 2 C.D.POULTER,J.L.FERRER,M.SEEMANN JRNL TITL FURTHER INSIGHT INTO CRYSTAL STRUCTURES OF ESCHERICHIA COLI JRNL TITL 2 ISPH/LYTB IN COMPLEX WITH TWO POTENT INHIBITORS OF THE MEP JRNL TITL 3 PATHWAY: A STARTING POINT FOR RATIONAL DESIGN OF NEW JRNL TITL 4 ANTIMICROBIALS. JRNL REF CHEMBIOCHEM V. 18 2137 2017 JRNL REFN ESSN 1439-7633 JRNL PMID 28862365 JRNL DOI 10.1002/CBIC.201700363 REMARK 2 REMARK 2 RESOLUTION. 1.95 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.7.0029 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.95 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.87 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 94.1 REMARK 3 NUMBER OF REFLECTIONS : 41004 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.207 REMARK 3 R VALUE (WORKING SET) : 0.205 REMARK 3 FREE R VALUE : 0.258 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2159 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.95 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.00 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3166 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.46 REMARK 3 BIN R VALUE (WORKING SET) : 0.2320 REMARK 3 BIN FREE R VALUE SET COUNT : 167 REMARK 3 BIN FREE R VALUE : 0.3180 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4766 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 46 REMARK 3 SOLVENT ATOMS : 442 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 29.81 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.43000 REMARK 3 B22 (A**2) : -1.72000 REMARK 3 B33 (A**2) : 0.21000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 1.02000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.187 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.133 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 10.365 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.926 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.894 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4895 ; 0.008 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 4764 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 6645 ; 1.260 ; 1.975 REMARK 3 BOND ANGLES OTHERS (DEGREES): 10929 ; 1.604 ; 3.002 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 618 ; 4.755 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 226 ;37.135 ;24.159 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 853 ;15.358 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 44 ;15.066 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 767 ; 0.097 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 5548 ; 0.004 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 1068 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): 9656 ; 5.260 ; 3.000 REMARK 3 SPHERICITY; FREE ATOMS (A**2): 127 ;19.242 ; 5.000 REMARK 3 SPHERICITY; BONDED ATOMS (A**2): 9895 ; 9.341 ; 5.000 REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 18 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1 A 49 REMARK 3 ORIGIN FOR THE GROUP (A): 37.4719 -9.2499 29.3868 REMARK 3 T TENSOR REMARK 3 T11: 0.0898 T22: 0.0492 REMARK 3 T33: 0.0749 T12: -0.0101 REMARK 3 T13: -0.0646 T23: 0.0037 REMARK 3 L TENSOR REMARK 3 L11: 0.3338 L22: 0.5481 REMARK 3 L33: 0.9767 L12: 0.1305 REMARK 3 L13: -0.3554 L23: 0.0352 REMARK 3 S TENSOR REMARK 3 S11: 0.0352 S12: 0.0213 S13: -0.0757 REMARK 3 S21: 0.0298 S22: -0.0441 S23: 0.0183 REMARK 3 S31: 0.0969 S32: -0.0168 S33: 0.0089 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 50 A 68 REMARK 3 ORIGIN FOR THE GROUP (A): 25.4946 -8.0160 39.3096 REMARK 3 T TENSOR REMARK 3 T11: 0.0413 T22: 0.1556 REMARK 3 T33: 0.1898 T12: -0.0573 REMARK 3 T13: -0.0686 T23: 0.0314 REMARK 3 L TENSOR REMARK 3 L11: 2.5477 L22: 4.9268 REMARK 3 L33: 4.2772 L12: 1.4350 REMARK 3 L13: -1.6511 L23: 2.5743 REMARK 3 S TENSOR REMARK 3 S11: -0.0101 S12: 0.0301 S13: 0.1023 REMARK 3 S21: -0.0121 S22: -0.1676 S23: 0.4941 REMARK 3 S31: 0.1000 S32: -0.3419 S33: 0.1777 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 69 A 103 REMARK 3 ORIGIN FOR THE GROUP (A): 35.1824 0.8280 43.1512 REMARK 3 T TENSOR REMARK 3 T11: 0.1340 T22: 0.0655 REMARK 3 T33: 0.1102 T12: -0.0068 REMARK 3 T13: -0.0153 T23: 0.0047 REMARK 3 L TENSOR REMARK 3 L11: 0.7063 L22: 2.5367 REMARK 3 L33: 0.3819 L12: 0.5389 REMARK 3 L13: 0.3425 L23: 0.6577 REMARK 3 S TENSOR REMARK 3 S11: 0.1522 S12: -0.0171 S13: 0.0727 REMARK 3 S21: 0.2309 S22: -0.1589 S23: 0.2423 REMARK 3 S31: 0.0480 S32: -0.0928 S33: 0.0067 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 104 A 127 REMARK 3 ORIGIN FOR THE GROUP (A): 39.4811 15.3121 38.2521 REMARK 3 T TENSOR REMARK 3 T11: 0.1107 T22: 0.0142 REMARK 3 T33: 0.1122 T12: 0.0048 REMARK 3 T13: -0.0429 T23: -0.0321 REMARK 3 L TENSOR REMARK 3 L11: 1.2094 L22: 1.2150 REMARK 3 L33: 0.8462 L12: 1.1698 REMARK 3 L13: 0.0723 L23: -0.1762 REMARK 3 S TENSOR REMARK 3 S11: 0.1429 S12: -0.0287 S13: 0.1319 REMARK 3 S21: 0.1688 S22: -0.0540 S23: 0.1603 REMARK 3 S31: -0.0051 S32: 0.0382 S33: -0.0889 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 128 A 139 REMARK 3 ORIGIN FOR THE GROUP (A): 34.6427 16.4722 42.4907 REMARK 3 T TENSOR REMARK 3 T11: 0.3416 T22: 0.0252 REMARK 3 T33: 0.1513 T12: 0.0129 REMARK 3 T13: 0.1118 T23: 0.0121 REMARK 3 L TENSOR REMARK 3 L11: 5.7939 L22: 8.1713 REMARK 3 L33: 0.3657 L12: -2.4083 REMARK 3 L13: 1.1574 L23: 0.4751 REMARK 3 S TENSOR REMARK 3 S11: 0.1055 S12: 0.1874 S13: -0.0362 REMARK 3 S21: 0.9973 S22: -0.1575 S23: 0.6201 REMARK 3 S31: 0.1291 S32: 0.0206 S33: 0.0520 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 140 A 207 REMARK 3 ORIGIN FOR THE GROUP (A): 43.6137 18.5710 28.3827 REMARK 3 T TENSOR REMARK 3 T11: 0.0567 T22: 0.0607 REMARK 3 T33: 0.0852 T12: -0.0032 REMARK 3 T13: -0.0495 T23: -0.0095 REMARK 3 L TENSOR REMARK 3 L11: 0.0812 L22: 1.3096 REMARK 3 L33: 0.4991 L12: 0.0787 REMARK 3 L13: -0.1365 L23: 0.0868 REMARK 3 S TENSOR REMARK 3 S11: 0.0172 S12: 0.0011 S13: 0.0360 REMARK 3 S21: 0.0462 S22: 0.0090 S23: 0.0615 REMARK 3 S31: -0.0058 S32: -0.0343 S33: -0.0262 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 208 A 255 REMARK 3 ORIGIN FOR THE GROUP (A): 38.2486 0.0247 11.2321 REMARK 3 T TENSOR REMARK 3 T11: 0.0694 T22: 0.0455 REMARK 3 T33: 0.0465 T12: 0.0091 REMARK 3 T13: -0.0500 T23: -0.0087 REMARK 3 L TENSOR REMARK 3 L11: 0.3799 L22: 1.5591 REMARK 3 L33: 0.9963 L12: 0.2142 REMARK 3 L13: 0.1820 L23: 0.0017 REMARK 3 S TENSOR REMARK 3 S11: 0.0548 S12: -0.0226 S13: -0.0714 REMARK 3 S21: -0.1052 S22: -0.0268 S23: -0.0392 REMARK 3 S31: 0.0000 S32: 0.0148 S33: -0.0279 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 256 A 288 REMARK 3 ORIGIN FOR THE GROUP (A): 40.5709 -10.1986 9.1448 REMARK 3 T TENSOR REMARK 3 T11: 0.1107 T22: 0.0481 REMARK 3 T33: 0.0871 T12: 0.0233 REMARK 3 T13: -0.0643 T23: -0.0100 REMARK 3 L TENSOR REMARK 3 L11: 0.2264 L22: 1.1371 REMARK 3 L33: 1.6524 L12: 0.3128 REMARK 3 L13: 0.3483 L23: -0.3975 REMARK 3 S TENSOR REMARK 3 S11: -0.0486 S12: 0.0028 S13: 0.0076 REMARK 3 S21: -0.1843 S22: -0.0094 S23: -0.0182 REMARK 3 S31: 0.0807 S32: 0.0464 S33: 0.0580 REMARK 3 REMARK 3 TLS GROUP : 9 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 289 A 309 REMARK 3 ORIGIN FOR THE GROUP (A): 50.7302 -7.9938 28.6930 REMARK 3 T TENSOR REMARK 3 T11: 0.0785 T22: 0.0648 REMARK 3 T33: 0.0854 T12: 0.0195 REMARK 3 T13: -0.0684 T23: 0.0003 REMARK 3 L TENSOR REMARK 3 L11: 1.6038 L22: 0.6400 REMARK 3 L33: 4.7513 L12: 0.7084 REMARK 3 L13: -1.4103 L23: 0.3889 REMARK 3 S TENSOR REMARK 3 S11: 0.1748 S12: -0.1297 S13: -0.0871 REMARK 3 S21: 0.1018 S22: -0.0213 S23: -0.0612 REMARK 3 S31: 0.0638 S32: 0.2985 S33: -0.1535 REMARK 3 REMARK 3 TLS GROUP : 10 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 1 B 49 REMARK 3 ORIGIN FOR THE GROUP (A): 16.6620 12.4672 -3.0356 REMARK 3 T TENSOR REMARK 3 T11: 0.0750 T22: 0.0526 REMARK 3 T33: 0.0773 T12: -0.0122 REMARK 3 T13: -0.0656 T23: 0.0020 REMARK 3 L TENSOR REMARK 3 L11: 0.1430 L22: 0.5988 REMARK 3 L33: 0.8075 L12: -0.0856 REMARK 3 L13: 0.1006 L23: 0.5713 REMARK 3 S TENSOR REMARK 3 S11: -0.0151 S12: -0.0178 S13: 0.0288 REMARK 3 S21: -0.0145 S22: 0.0286 S23: -0.0248 REMARK 3 S31: -0.0162 S32: 0.0158 S33: -0.0135 REMARK 3 REMARK 3 TLS GROUP : 11 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 50 B 58 REMARK 3 ORIGIN FOR THE GROUP (A): 26.2605 14.2345 3.4921 REMARK 3 T TENSOR REMARK 3 T11: 0.0552 T22: 0.0910 REMARK 3 T33: 0.1282 T12: -0.0168 REMARK 3 T13: -0.0572 T23: 0.0113 REMARK 3 L TENSOR REMARK 3 L11: 1.6649 L22: 16.5879 REMARK 3 L33: 7.0769 L12: -4.2754 REMARK 3 L13: 2.2251 L23: -8.3413 REMARK 3 S TENSOR REMARK 3 S11: -0.0829 S12: 0.0200 S13: 0.1377 REMARK 3 S21: -0.0927 S22: -0.0169 S23: -0.2891 REMARK 3 S31: 0.1201 S32: 0.4256 S33: 0.0998 REMARK 3 REMARK 3 TLS GROUP : 12 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 59 B 98 REMARK 3 ORIGIN FOR THE GROUP (A): 19.8574 4.9764 12.8419 REMARK 3 T TENSOR REMARK 3 T11: 0.1092 T22: 0.0576 REMARK 3 T33: 0.0756 T12: 0.0071 REMARK 3 T13: -0.0638 T23: -0.0003 REMARK 3 L TENSOR REMARK 3 L11: 1.7171 L22: 1.3731 REMARK 3 L33: 1.0005 L12: 1.0625 REMARK 3 L13: 1.1006 L23: 0.4910 REMARK 3 S TENSOR REMARK 3 S11: 0.0429 S12: -0.0981 S13: 0.0036 REMARK 3 S21: 0.1762 S22: -0.0999 S23: -0.1267 REMARK 3 S31: 0.0828 S32: -0.0343 S33: 0.0569 REMARK 3 REMARK 3 TLS GROUP : 13 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 99 B 127 REMARK 3 ORIGIN FOR THE GROUP (A): 12.4219 -10.7285 5.4449 REMARK 3 T TENSOR REMARK 3 T11: 0.0986 T22: 0.0522 REMARK 3 T33: 0.0997 T12: 0.0000 REMARK 3 T13: -0.0754 T23: 0.0072 REMARK 3 L TENSOR REMARK 3 L11: 0.2139 L22: 2.8935 REMARK 3 L33: 0.7474 L12: 0.5915 REMARK 3 L13: -0.0770 L23: 0.7364 REMARK 3 S TENSOR REMARK 3 S11: 0.0263 S12: -0.0138 S13: -0.0540 REMARK 3 S21: 0.2598 S22: -0.1018 S23: -0.0828 REMARK 3 S31: 0.0926 S32: -0.0356 S33: 0.0754 REMARK 3 REMARK 3 TLS GROUP : 14 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 128 B 139 REMARK 3 ORIGIN FOR THE GROUP (A): 17.1425 -13.2229 10.5702 REMARK 3 T TENSOR REMARK 3 T11: 0.1483 T22: 0.1105 REMARK 3 T33: 0.1026 T12: 0.0436 REMARK 3 T13: -0.0866 T23: -0.0045 REMARK 3 L TENSOR REMARK 3 L11: 1.8908 L22: 7.8234 REMARK 3 L33: 2.6701 L12: 0.0371 REMARK 3 L13: 0.4610 L23: -1.1700 REMARK 3 S TENSOR REMARK 3 S11: -0.0018 S12: -0.2013 S13: 0.1647 REMARK 3 S21: 0.2458 S22: 0.1429 S23: 0.0096 REMARK 3 S31: 0.2621 S32: 0.1423 S33: -0.1411 REMARK 3 REMARK 3 TLS GROUP : 15 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 140 B 204 REMARK 3 ORIGIN FOR THE GROUP (A): 11.0219 -16.0889 -4.3156 REMARK 3 T TENSOR REMARK 3 T11: 0.0992 T22: 0.0492 REMARK 3 T33: 0.0711 T12: 0.0077 REMARK 3 T13: -0.0535 T23: -0.0087 REMARK 3 L TENSOR REMARK 3 L11: 0.2564 L22: 1.1510 REMARK 3 L33: 0.6274 L12: 0.2042 REMARK 3 L13: 0.1179 L23: -0.2787 REMARK 3 S TENSOR REMARK 3 S11: 0.0282 S12: -0.0140 S13: -0.0503 REMARK 3 S21: 0.0672 S22: -0.0434 S23: -0.0674 REMARK 3 S31: 0.1305 S32: 0.0040 S33: 0.0152 REMARK 3 REMARK 3 TLS GROUP : 16 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 205 B 262 REMARK 3 ORIGIN FOR THE GROUP (A): 18.5032 3.6891 -22.3732 REMARK 3 T TENSOR REMARK 3 T11: 0.0725 T22: 0.0466 REMARK 3 T33: 0.0710 T12: -0.0019 REMARK 3 T13: -0.0244 T23: -0.0083 REMARK 3 L TENSOR REMARK 3 L11: 0.3322 L22: 1.5293 REMARK 3 L33: 0.1906 L12: -0.3937 REMARK 3 L13: 0.0744 L23: 0.2522 REMARK 3 S TENSOR REMARK 3 S11: 0.0225 S12: -0.0029 S13: -0.0112 REMARK 3 S21: -0.1322 S22: 0.0051 S23: -0.0916 REMARK 3 S31: -0.0245 S32: 0.0174 S33: -0.0275 REMARK 3 REMARK 3 TLS GROUP : 17 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 263 B 295 REMARK 3 ORIGIN FOR THE GROUP (A): 13.9074 14.1289 -21.1346 REMARK 3 T TENSOR REMARK 3 T11: 0.1230 T22: 0.0442 REMARK 3 T33: 0.0844 T12: 0.0153 REMARK 3 T13: -0.0517 T23: 0.0047 REMARK 3 L TENSOR REMARK 3 L11: 0.1759 L22: 0.9754 REMARK 3 L33: 1.4402 L12: 0.2703 REMARK 3 L13: -0.4978 L23: -0.7595 REMARK 3 S TENSOR REMARK 3 S11: 0.0106 S12: 0.0027 S13: -0.0097 REMARK 3 S21: -0.1621 S22: -0.0863 S23: -0.0459 REMARK 3 S31: -0.0676 S32: -0.0155 S33: 0.0757 REMARK 3 REMARK 3 TLS GROUP : 18 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 296 B 309 REMARK 3 ORIGIN FOR THE GROUP (A): 3.4703 10.8267 1.1982 REMARK 3 T TENSOR REMARK 3 T11: 0.0820 T22: 0.0663 REMARK 3 T33: 0.1159 T12: -0.0126 REMARK 3 T13: -0.0465 T23: -0.0283 REMARK 3 L TENSOR REMARK 3 L11: 2.0129 L22: 3.2495 REMARK 3 L33: 6.5091 L12: 2.0516 REMARK 3 L13: 2.1503 L23: 3.6187 REMARK 3 S TENSOR REMARK 3 S11: 0.0320 S12: -0.1291 S13: 0.1505 REMARK 3 S21: -0.0616 S22: 0.0170 S23: -0.0693 REMARK 3 S31: -0.1981 S32: -0.2450 S33: -0.0489 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS U REMARK 3 VALUES WITH TLS ADDED REMARK 4 REMARK 4 3ZGN COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 18-DEC-12. REMARK 100 THE DEPOSITION ID IS D_1290055190. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-FEB-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID23-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 43163 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.950 REMARK 200 RESOLUTION RANGE LOW (A) : 46.900 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 94.1 REMARK 200 DATA REDUNDANCY : 3.100 REMARK 200 R MERGE (I) : 0.07000 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 11.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.95 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.05 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.0 REMARK 200 DATA REDUNDANCY IN SHELL : 3.10 REMARK 200 R MERGE FOR SHELL (I) : 0.45000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 3KE8 REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.50 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.34 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 24% PEG 3350, 0.1 M BIS-TRIS PH6.5, REMARK 280 200 MM LISO4 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 56.19500 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 40.28500 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 56.19500 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 40.28500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH B2072 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -15 REMARK 465 ARG A -14 REMARK 465 GLY A -13 REMARK 465 SER A -12 REMARK 465 HIS A -11 REMARK 465 HIS A -10 REMARK 465 HIS A -9 REMARK 465 HIS A -8 REMARK 465 HIS A -7 REMARK 465 HIS A -6 REMARK 465 GLY A -5 REMARK 465 SER A -4 REMARK 465 ALA A -3 REMARK 465 CYS A -2 REMARK 465 GLU A -1 REMARK 465 LEU A 0 REMARK 465 VAL A 310 REMARK 465 ASP A 311 REMARK 465 ILE A 312 REMARK 465 ARG A 313 REMARK 465 GLU A 314 REMARK 465 VAL A 315 REMARK 465 ASP A 316 REMARK 465 MET B -15 REMARK 465 ARG B -14 REMARK 465 GLY B -13 REMARK 465 SER B -12 REMARK 465 HIS B -11 REMARK 465 HIS B -10 REMARK 465 HIS B -9 REMARK 465 HIS B -8 REMARK 465 HIS B -7 REMARK 465 HIS B -6 REMARK 465 GLY B -5 REMARK 465 SER B -4 REMARK 465 ALA B -3 REMARK 465 CYS B -2 REMARK 465 GLU B -1 REMARK 465 LEU B 0 REMARK 465 VAL B 310 REMARK 465 ASP B 311 REMARK 465 ILE B 312 REMARK 465 ARG B 313 REMARK 465 GLU B 314 REMARK 465 VAL B 315 REMARK 465 ASP B 316 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OG1 THR A 168 O HOH A 2114 2.02 REMARK 500 OG SER A 226 O HOH A 2110 2.05 REMARK 500 OG1 THR B 168 O HOH B 2119 2.05 REMARK 500 O HOH B 2130 O HOH B 2131 2.09 REMARK 500 O HOH B 2022 O HOH B 2055 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 NZ LYS B 183 O HOH A 2189 4545 0.45 REMARK 500 CE LYS B 183 O HOH A 2189 4545 1.57 REMARK 500 O HOH A 2159 O HOH A 2159 2656 1.84 REMARK 500 O HOH A 2064 O HOH A 2159 2656 2.00 REMARK 500 NZ LYS A 306 O HOH A 2007 2656 2.05 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS A 37 154.81 72.14 REMARK 500 ASP A 88 37.79 -84.39 REMARK 500 SER A 135 -7.52 -152.71 REMARK 500 LYS A 193 -74.84 -125.80 REMARK 500 HIS B 37 159.10 75.66 REMARK 500 LYS B 193 -68.84 -122.93 REMARK 500 CYS B 261 82.98 48.98 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A2068 DISTANCE = 5.91 ANGSTROMS REMARK 525 HOH B2047 DISTANCE = 6.54 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SF4 A1311 FE4 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 12 SG REMARK 620 2 SF4 A1311 S1 112.6 REMARK 620 3 SF4 A1311 S2 126.5 99.3 REMARK 620 4 SF4 A1311 S3 120.7 96.4 95.6 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SF4 A1311 FE2 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 96 SG REMARK 620 2 SF4 A1311 S1 120.8 REMARK 620 3 SF4 A1311 S3 113.7 97.4 REMARK 620 4 SF4 A1311 S4 121.4 98.5 100.7 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SF4 A1311 FE3 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 197 SG REMARK 620 2 SF4 A1311 S1 127.9 REMARK 620 3 SF4 A1311 S2 108.5 99.5 REMARK 620 4 SF4 A1311 S4 122.7 95.8 96.3 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SF4 A1311 FE1 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 10G A1310 S2 REMARK 620 2 SF4 A1311 S2 137.6 REMARK 620 3 SF4 A1311 S3 119.2 96.4 REMARK 620 4 SF4 A1311 S4 99.2 95.7 100.4 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SF4 B1310 FE4 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 12 SG REMARK 620 2 SF4 B1310 S1 114.5 REMARK 620 3 SF4 B1310 S2 128.0 94.9 REMARK 620 4 SF4 B1310 S3 122.5 92.5 96.2 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SF4 B1310 FE2 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 96 SG REMARK 620 2 SF4 B1310 S1 128.4 REMARK 620 3 SF4 B1310 S3 113.3 91.8 REMARK 620 4 SF4 B1310 S4 123.2 96.0 96.0 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SF4 B1310 FE3 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 197 SG REMARK 620 2 SF4 B1310 S1 129.6 REMARK 620 3 SF4 B1310 S2 108.0 94.6 REMARK 620 4 SF4 B1310 S4 125.9 94.9 95.1 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SF4 B1310 FE1 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 10G B1311 S2 REMARK 620 2 SF4 B1310 S2 141.1 REMARK 620 3 SF4 B1310 S3 117.8 94.8 REMARK 620 4 SF4 B1310 S4 103.2 93.7 94.9 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SF4 B 1310 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 10G A 1310 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 10G B 1311 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SF4 A 1311 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3ZGL RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURES OF ESCHERICHIA COLI ISPH IN COMPLEX WITH AMBPP A REMARK 900 POTENT INHIBITOR OF THE METHYLERYTHRITOL PHOSPHATE PATHWAY DBREF 3ZGN A 1 316 UNP P62623 ISPH_ECOLI 1 316 DBREF 3ZGN B 1 316 UNP P62623 ISPH_ECOLI 1 316 SEQADV 3ZGN MET A -15 UNP P62623 EXPRESSION TAG SEQADV 3ZGN ARG A -14 UNP P62623 EXPRESSION TAG SEQADV 3ZGN GLY A -13 UNP P62623 EXPRESSION TAG SEQADV 3ZGN SER A -12 UNP P62623 EXPRESSION TAG SEQADV 3ZGN HIS A -11 UNP P62623 EXPRESSION TAG SEQADV 3ZGN HIS A -10 UNP P62623 EXPRESSION TAG SEQADV 3ZGN HIS A -9 UNP P62623 EXPRESSION TAG SEQADV 3ZGN HIS A -8 UNP P62623 EXPRESSION TAG SEQADV 3ZGN HIS A -7 UNP P62623 EXPRESSION TAG SEQADV 3ZGN HIS A -6 UNP P62623 EXPRESSION TAG SEQADV 3ZGN GLY A -5 UNP P62623 EXPRESSION TAG SEQADV 3ZGN SER A -4 UNP P62623 EXPRESSION TAG SEQADV 3ZGN ALA A -3 UNP P62623 EXPRESSION TAG SEQADV 3ZGN CYS A -2 UNP P62623 EXPRESSION TAG SEQADV 3ZGN GLU A -1 UNP P62623 EXPRESSION TAG SEQADV 3ZGN LEU A 0 UNP P62623 EXPRESSION TAG SEQADV 3ZGN MET B -15 UNP P62623 EXPRESSION TAG SEQADV 3ZGN ARG B -14 UNP P62623 EXPRESSION TAG SEQADV 3ZGN GLY B -13 UNP P62623 EXPRESSION TAG SEQADV 3ZGN SER B -12 UNP P62623 EXPRESSION TAG SEQADV 3ZGN HIS B -11 UNP P62623 EXPRESSION TAG SEQADV 3ZGN HIS B -10 UNP P62623 EXPRESSION TAG SEQADV 3ZGN HIS B -9 UNP P62623 EXPRESSION TAG SEQADV 3ZGN HIS B -8 UNP P62623 EXPRESSION TAG SEQADV 3ZGN HIS B -7 UNP P62623 EXPRESSION TAG SEQADV 3ZGN HIS B -6 UNP P62623 EXPRESSION TAG SEQADV 3ZGN GLY B -5 UNP P62623 EXPRESSION TAG SEQADV 3ZGN SER B -4 UNP P62623 EXPRESSION TAG SEQADV 3ZGN ALA B -3 UNP P62623 EXPRESSION TAG SEQADV 3ZGN CYS B -2 UNP P62623 EXPRESSION TAG SEQADV 3ZGN GLU B -1 UNP P62623 EXPRESSION TAG SEQADV 3ZGN LEU B 0 UNP P62623 EXPRESSION TAG SEQRES 1 A 332 MET ARG GLY SER HIS HIS HIS HIS HIS HIS GLY SER ALA SEQRES 2 A 332 CYS GLU LEU MET GLN ILE LEU LEU ALA ASN PRO ARG GLY SEQRES 3 A 332 PHE CYS ALA GLY VAL ASP ARG ALA ILE SER ILE VAL GLU SEQRES 4 A 332 ASN ALA LEU ALA ILE TYR GLY ALA PRO ILE TYR VAL ARG SEQRES 5 A 332 HIS GLU VAL VAL HIS ASN ARG TYR VAL VAL ASP SER LEU SEQRES 6 A 332 ARG GLU ARG GLY ALA ILE PHE ILE GLU GLN ILE SER GLU SEQRES 7 A 332 VAL PRO ASP GLY ALA ILE LEU ILE PHE SER ALA HIS GLY SEQRES 8 A 332 VAL SER GLN ALA VAL ARG ASN GLU ALA LYS SER ARG ASP SEQRES 9 A 332 LEU THR VAL PHE ASP ALA THR CYS PRO LEU VAL THR LYS SEQRES 10 A 332 VAL HIS MET GLU VAL ALA ARG ALA SER ARG ARG GLY GLU SEQRES 11 A 332 GLU SER ILE LEU ILE GLY HIS ALA GLY HIS PRO GLU VAL SEQRES 12 A 332 GLU GLY THR MET GLY GLN TYR SER ASN PRO GLU GLY GLY SEQRES 13 A 332 MET TYR LEU VAL GLU SER PRO ASP ASP VAL TRP LYS LEU SEQRES 14 A 332 THR VAL LYS ASN GLU GLU LYS LEU SER PHE MET THR GLN SEQRES 15 A 332 THR THR LEU SER VAL ASP ASP THR SER ASP VAL ILE ASP SEQRES 16 A 332 ALA LEU ARG LYS ARG PHE PRO LYS ILE VAL GLY PRO ARG SEQRES 17 A 332 LYS ASP ASP ILE CYS TYR ALA THR THR ASN ARG GLN GLU SEQRES 18 A 332 ALA VAL ARG ALA LEU ALA GLU GLN ALA GLU VAL VAL LEU SEQRES 19 A 332 VAL VAL GLY SER LYS ASN SER SER ASN SER ASN ARG LEU SEQRES 20 A 332 ALA GLU LEU ALA GLN ARG MET GLY LYS ARG ALA PHE LEU SEQRES 21 A 332 ILE ASP ASP ALA LYS ASP ILE GLN GLU GLU TRP VAL LYS SEQRES 22 A 332 GLU VAL LYS CYS VAL GLY VAL THR ALA GLY ALA SER ALA SEQRES 23 A 332 PRO ASP ILE LEU VAL GLN ASN VAL VAL ALA ARG LEU GLN SEQRES 24 A 332 GLN LEU GLY GLY GLY GLU ALA ILE PRO LEU GLU GLY ARG SEQRES 25 A 332 GLU GLU ASN ILE VAL PHE GLU VAL PRO LYS GLU LEU ARG SEQRES 26 A 332 VAL ASP ILE ARG GLU VAL ASP SEQRES 1 B 332 MET ARG GLY SER HIS HIS HIS HIS HIS HIS GLY SER ALA SEQRES 2 B 332 CYS GLU LEU MET GLN ILE LEU LEU ALA ASN PRO ARG GLY SEQRES 3 B 332 PHE CYS ALA GLY VAL ASP ARG ALA ILE SER ILE VAL GLU SEQRES 4 B 332 ASN ALA LEU ALA ILE TYR GLY ALA PRO ILE TYR VAL ARG SEQRES 5 B 332 HIS GLU VAL VAL HIS ASN ARG TYR VAL VAL ASP SER LEU SEQRES 6 B 332 ARG GLU ARG GLY ALA ILE PHE ILE GLU GLN ILE SER GLU SEQRES 7 B 332 VAL PRO ASP GLY ALA ILE LEU ILE PHE SER ALA HIS GLY SEQRES 8 B 332 VAL SER GLN ALA VAL ARG ASN GLU ALA LYS SER ARG ASP SEQRES 9 B 332 LEU THR VAL PHE ASP ALA THR CYS PRO LEU VAL THR LYS SEQRES 10 B 332 VAL HIS MET GLU VAL ALA ARG ALA SER ARG ARG GLY GLU SEQRES 11 B 332 GLU SER ILE LEU ILE GLY HIS ALA GLY HIS PRO GLU VAL SEQRES 12 B 332 GLU GLY THR MET GLY GLN TYR SER ASN PRO GLU GLY GLY SEQRES 13 B 332 MET TYR LEU VAL GLU SER PRO ASP ASP VAL TRP LYS LEU SEQRES 14 B 332 THR VAL LYS ASN GLU GLU LYS LEU SER PHE MET THR GLN SEQRES 15 B 332 THR THR LEU SER VAL ASP ASP THR SER ASP VAL ILE ASP SEQRES 16 B 332 ALA LEU ARG LYS ARG PHE PRO LYS ILE VAL GLY PRO ARG SEQRES 17 B 332 LYS ASP ASP ILE CYS TYR ALA THR THR ASN ARG GLN GLU SEQRES 18 B 332 ALA VAL ARG ALA LEU ALA GLU GLN ALA GLU VAL VAL LEU SEQRES 19 B 332 VAL VAL GLY SER LYS ASN SER SER ASN SER ASN ARG LEU SEQRES 20 B 332 ALA GLU LEU ALA GLN ARG MET GLY LYS ARG ALA PHE LEU SEQRES 21 B 332 ILE ASP ASP ALA LYS ASP ILE GLN GLU GLU TRP VAL LYS SEQRES 22 B 332 GLU VAL LYS CYS VAL GLY VAL THR ALA GLY ALA SER ALA SEQRES 23 B 332 PRO ASP ILE LEU VAL GLN ASN VAL VAL ALA ARG LEU GLN SEQRES 24 B 332 GLN LEU GLY GLY GLY GLU ALA ILE PRO LEU GLU GLY ARG SEQRES 25 B 332 GLU GLU ASN ILE VAL PHE GLU VAL PRO LYS GLU LEU ARG SEQRES 26 B 332 VAL ASP ILE ARG GLU VAL ASP HET 10G A1310 15 HET SF4 A1311 8 HET SF4 B1310 8 HET 10G B1311 15 HETNAM 10G (2E)-3-METHYL-4-SULFANYLBUT-2-EN-1-YL TRIHYDROGEN HETNAM 2 10G DIPHOSPHATE HETNAM SF4 IRON/SULFUR CLUSTER FORMUL 3 10G 2(C5 H12 O7 P2 S) FORMUL 4 SF4 2(FE4 S4) FORMUL 7 HOH *442(H2 O) HELIX 1 1 CYS A 12 GLY A 30 1 19 HELIX 2 2 ASN A 42 ARG A 52 1 11 HELIX 3 3 GLN A 59 VAL A 63 5 5 HELIX 4 4 SER A 77 ARG A 87 1 11 HELIX 5 5 CYS A 96 ARG A 112 1 17 HELIX 6 6 HIS A 124 GLY A 132 1 9 HELIX 7 7 SER A 146 LEU A 153 1 8 HELIX 8 8 SER A 170 PHE A 185 1 16 HELIX 9 9 CYS A 197 ALA A 214 1 18 HELIX 10 10 SER A 225 MET A 238 1 14 HELIX 11 11 ASP A 247 ILE A 251 5 5 HELIX 12 12 GLN A 252 VAL A 256 5 5 HELIX 13 13 PRO A 271 LEU A 285 1 15 HELIX 14 14 PRO A 305 ARG A 309 5 5 HELIX 15 15 CYS B 12 GLY B 30 1 19 HELIX 16 16 ASN B 42 ARG B 52 1 11 HELIX 17 17 GLN B 59 VAL B 63 5 5 HELIX 18 18 SER B 77 ARG B 87 1 11 HELIX 19 19 CYS B 96 GLY B 113 1 18 HELIX 20 20 HIS B 124 GLY B 132 1 9 HELIX 21 21 SER B 146 LEU B 153 1 8 HELIX 22 22 SER B 170 PHE B 185 1 16 HELIX 23 23 CYS B 197 ALA B 214 1 18 HELIX 24 24 SER B 225 MET B 238 1 14 HELIX 25 25 ASP B 247 ILE B 251 5 5 HELIX 26 26 GLN B 252 VAL B 256 5 5 HELIX 27 27 PRO B 271 LEU B 285 1 15 HELIX 28 28 PRO B 305 ARG B 309 5 5 SHEET 1 AA 5 ARG A 241 ILE A 245 0 SHEET 2 AA 5 VAL A 216 VAL A 220 1 O VAL A 217 N PHE A 243 SHEET 3 AA 5 CYS A 261 ALA A 266 1 O GLY A 263 N LEU A 218 SHEET 4 AA 5 GLN A 2 LEU A 5 1 O GLN A 2 N VAL A 262 SHEET 5 AA 5 ALA A 290 PRO A 292 1 O ILE A 291 N LEU A 5 SHEET 1 AB 4 ALA A 54 ILE A 57 0 SHEET 2 AB 4 ILE A 33 ARG A 36 1 O ILE A 33 N ILE A 55 SHEET 3 AB 4 ILE A 68 PHE A 71 1 O ILE A 68 N TYR A 34 SHEET 4 AB 4 THR A 90 ASP A 93 1 O THR A 90 N LEU A 69 SHEET 1 AC 3 MET A 141 VAL A 144 0 SHEET 2 AC 3 GLU A 115 ILE A 119 1 O SER A 116 N TYR A 142 SHEET 3 AC 3 LEU A 161 THR A 165 1 O SER A 162 N ILE A 117 SHEET 1 BA 5 ARG B 241 ILE B 245 0 SHEET 2 BA 5 VAL B 216 VAL B 220 1 O VAL B 217 N PHE B 243 SHEET 3 BA 5 VAL B 262 ALA B 266 1 O GLY B 263 N LEU B 218 SHEET 4 BA 5 ILE B 3 LEU B 5 1 O LEU B 4 N VAL B 264 SHEET 5 BA 5 ILE B 291 PRO B 292 1 O ILE B 291 N LEU B 5 SHEET 1 BB 4 ALA B 54 ILE B 57 0 SHEET 2 BB 4 ILE B 33 ARG B 36 1 O ILE B 33 N ILE B 55 SHEET 3 BB 4 ILE B 68 PHE B 71 1 O ILE B 68 N TYR B 34 SHEET 4 BB 4 THR B 90 ASP B 93 1 O THR B 90 N LEU B 69 SHEET 1 BC 3 MET B 141 VAL B 144 0 SHEET 2 BC 3 GLU B 115 ILE B 119 1 O SER B 116 N TYR B 142 SHEET 3 BC 3 LEU B 161 THR B 165 1 O SER B 162 N ILE B 117 LINK SG CYS A 12 FE4 SF4 A1311 1555 1555 2.28 LINK SG CYS A 96 FE2 SF4 A1311 1555 1555 2.33 LINK SG CYS A 197 FE3 SF4 A1311 1555 1555 2.42 LINK S2 10G A1310 FE1 SF4 A1311 1555 1555 2.35 LINK SG CYS B 12 FE4 SF4 B1310 1555 1555 2.26 LINK SG CYS B 96 FE2 SF4 B1310 1555 1555 2.26 LINK SG CYS B 197 FE3 SF4 B1310 1555 1555 2.35 LINK FE1 SF4 B1310 S2 10G B1311 1555 1555 2.36 CISPEP 1 ASN A 7 PRO A 8 0 3.85 CISPEP 2 ALA A 31 PRO A 32 0 -2.02 CISPEP 3 ASN B 7 PRO B 8 0 0.29 CISPEP 4 ALA B 31 PRO B 32 0 1.28 SITE 1 AC1 6 CYS B 12 GLY B 14 CYS B 96 THR B 167 SITE 2 AC1 6 CYS B 197 10G B1311 SITE 1 AC2 16 VAL A 15 VAL A 40 HIS A 41 ALA A 73 SITE 2 AC2 16 HIS A 74 VAL A 99 HIS A 124 THR A 167 SITE 3 AC2 16 THR A 168 ASN A 224 SER A 225 SER A 226 SITE 4 AC2 16 ASN A 227 SER A 269 SF4 A1311 HOH A2114 SITE 1 AC3 15 VAL B 15 VAL B 40 HIS B 41 ALA B 73 SITE 2 AC3 15 HIS B 74 VAL B 99 HIS B 124 THR B 167 SITE 3 AC3 15 THR B 168 SER B 225 SER B 226 ASN B 227 SITE 4 AC3 15 SER B 269 SF4 B1310 HOH B2119 SITE 1 AC4 6 CYS A 12 GLY A 14 CYS A 96 THR A 167 SITE 2 AC4 6 CYS A 197 10G A1310 CRYST1 112.390 80.570 70.620 90.00 94.46 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008898 0.000000 0.000694 0.00000 SCALE2 0.000000 0.012412 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014203 0.00000