HEADER HYDROLASE 04-JAN-13 3ZI7 TITLE STRUCTURE OF FAE SOLVED BY SAD FROM DATA COLLECTED BY DIRECT DATA TITLE 2 COLLECTION (DDC) USING THE GROB ROBOT GONIOMETER COMPND MOL_ID: 1; COMPND 2 MOLECULE: ENDO-1,4-BETA-XYLANASE Y; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: XYLANASE Y, 1\,4-BETA-D-XYLAN XYLANOHYDROLASE Y, XYLY, COMPND 5 FERULOYL ESTERASE DOMAIN; COMPND 6 EC: 3.2.1.8; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CLOSTRIDIUM THERMOCELLUM; SOURCE 3 ORGANISM_TAXID: 1094188; SOURCE 4 STRAIN: YS; SOURCE 5 ATCC: 1515; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_VECTOR: PET21A KEYWDS HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR M.W.BOWLER REVDAT 4 16-OCT-24 3ZI7 1 REMARK LINK REVDAT 3 03-JUL-13 3ZI7 1 JRNL REVDAT 2 22-MAY-13 3ZI7 1 JRNL REMARK REVDAT 1 01-MAY-13 3ZI7 0 JRNL AUTH J.L.FERRER,N.A.LARIVE,M.W.BOWLER,D.NURIZZO JRNL TITL RECENT PROGRESS IN ROBOT-BASED SYSTEMS FOR CRYSTALLOGRAPHY JRNL TITL 2 AND THEIR CONTRIBUTION TO DRUG DISCOVERY. JRNL REF EXPERT OPIN.DRUG DISCOV. V. 8 835 2013 JRNL REFN ISSN 1746-0441 JRNL PMID 23656378 JRNL DOI 10.1517/17460441.2013.793666 REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.7.0029 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 3 NUMBER OF REFLECTIONS : 34580 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.124 REMARK 3 R VALUE (WORKING SET) : 0.123 REMARK 3 FREE R VALUE : 0.160 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1820 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.30 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.36 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2308 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 92.58 REMARK 3 BIN R VALUE (WORKING SET) : 0.1140 REMARK 3 BIN FREE R VALUE SET COUNT : 126 REMARK 3 BIN FREE R VALUE : 0.1580 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4580 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 12 REMARK 3 SOLVENT ATOMS : 754 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 11.28 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.26000 REMARK 3 B22 (A**2) : -0.01000 REMARK 3 B33 (A**2) : 0.27000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.186 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.148 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.082 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.282 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.965 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.945 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4809 ; 0.020 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 4244 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 6552 ; 1.881 ; 1.936 REMARK 3 BOND ANGLES OTHERS (DEGREES): 9781 ; 1.815 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 569 ; 6.144 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 254 ;37.546 ;23.937 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 666 ;13.486 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 17 ;20.373 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 653 ; 0.152 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 5585 ; 0.011 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 1264 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. REMARK 4 REMARK 4 3ZI7 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 04-JAN-13. REMARK 100 THE DEPOSITION ID IS D_1290055322. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-NOV-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.2 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID14-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.933 REMARK 200 MONOCHROMATOR : DIAMOND001 REMARK 200 OPTICS : GALLIUM221 REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 52409 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 20.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 200 DATA REDUNDANCY : 7.600 REMARK 200 R MERGE (I) : 0.05000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 28.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.38 REMARK 200 COMPLETENESS FOR SHELL (%) : 94.2 REMARK 200 DATA REDUNDANCY IN SHELL : 4.90 REMARK 200 R MERGE FOR SHELL (I) : 0.08000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 15.20 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SHELXCDE REMARK 200 STARTING MODEL: NONE REMARK 200 REMARK 200 REMARK: DATA WERE COLLECTED DIRECTLY USING THE GROB ROBOT REMARK 200 GONIOMETER REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.32 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PH 7.2 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 32.80450 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 56.65850 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 54.31950 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 56.65850 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 32.80450 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 54.31950 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MSE A 789 REMARK 465 ALA A 790 REMARK 465 SER A 791 REMARK 465 ASP A 792 REMARK 465 LYS A 793 REMARK 465 PHE A 794 REMARK 465 PRO A 795 REMARK 465 VAL A 796 REMARK 465 ALA A 797 REMARK 465 GLU A 798 REMARK 465 ASN A 799 REMARK 465 PRO A 800 REMARK 465 SER A 801 REMARK 465 SER A 802 REMARK 465 MSE B 789 REMARK 465 ALA B 790 REMARK 465 SER B 791 REMARK 465 ASP B 792 REMARK 465 LYS B 793 REMARK 465 PHE B 794 REMARK 465 PRO B 795 REMARK 465 VAL B 796 REMARK 465 ALA B 797 REMARK 465 GLU B 798 REMARK 465 ASN B 799 REMARK 465 PRO B 800 REMARK 465 SER B 801 REMARK 465 SER B 802 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 CD CD A 2089 O HOH A 3237 1.57 REMARK 500 CD CD B 2089 O HOH B 3232 1.59 REMARK 500 ND1 HIS B 1081 O HOH B 3350 1.77 REMARK 500 O HOH B 3278 O HOH B 3279 1.91 REMARK 500 ND2 ASN A 858 O HOH A 3128 1.92 REMARK 500 O HOH B 3136 O HOH B 3247 1.92 REMARK 500 O HOH A 3290 O HOH A 3380 1.95 REMARK 500 O HOH A 3054 O HOH A 3061 2.00 REMARK 500 O HOH B 3046 O HOH B 3149 2.04 REMARK 500 O HOH A 3346 O HOH A 3347 2.11 REMARK 500 ND1 HIS A 1081 O HOH A 3356 2.11 REMARK 500 O HOH A 3183 O HOH A 3360 2.12 REMARK 500 O HOH A 3090 O HOH B 3206 2.13 REMARK 500 O HOH B 3270 O HOH B 3271 2.13 REMARK 500 O HOH B 3349 O HOH B 3350 2.14 REMARK 500 O HOH B 3291 O HOH B 3294 2.18 REMARK 500 O HOH A 3018 O HOH A 3094 2.18 REMARK 500 CD2 HIS B 1081 O HOH B 3345 2.18 REMARK 500 O HOH B 3173 O HOH B 3314 2.19 REMARK 500 OH TYR B 819 OE2 GLU B 892 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 ND2 ASN B 854 O HOH A 3216 4555 1.34 REMARK 500 O HOH A 3103 O HOH B 3289 3545 1.37 REMARK 500 O HOH A 3104 O HOH B 3291 3545 1.53 REMARK 500 CG ASN B 854 O HOH A 3216 4555 1.76 REMARK 500 O HOH A 3059 O HOH B 3281 3545 1.76 REMARK 500 O HOH A 3218 O HOH B 3128 4455 1.99 REMARK 500 OD1 ASN B 854 O HOH A 3216 4555 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 SER A 927 CA SER A 927 CB 0.091 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 MSE A 955 CA - CB - CG ANGL. DEV. = 17.9 DEGREES REMARK 500 MSE A 964 CG - SE - CE ANGL. DEV. = -14.2 DEGREES REMARK 500 VAL A 965 CG1 - CB - CG2 ANGL. DEV. = 11.6 DEGREES REMARK 500 ARG A1006 NE - CZ - NH1 ANGL. DEV. = 5.5 DEGREES REMARK 500 ARG A1006 NE - CZ - NH2 ANGL. DEV. = -5.1 DEGREES REMARK 500 ARG B 813 NE - CZ - NH1 ANGL. DEV. = 3.2 DEGREES REMARK 500 ARG B 828 NE - CZ - NH2 ANGL. DEV. = -3.2 DEGREES REMARK 500 VAL B 965 CG1 - CB - CG2 ANGL. DEV. = 10.0 DEGREES REMARK 500 ARG B1006 NE - CZ - NH2 ANGL. DEV. = -5.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 VAL A 878 -52.48 -131.99 REMARK 500 SEP A 954 -119.94 61.53 REMARK 500 CYS A 967 28.62 -140.93 REMARK 500 THR A1040 146.48 170.09 REMARK 500 ASN A1047 20.11 -153.31 REMARK 500 VAL B 878 -52.95 -136.08 REMARK 500 THR B 931 -166.57 -107.60 REMARK 500 SEP B 954 -120.94 63.73 REMARK 500 THR B1040 145.70 171.24 REMARK 500 ASN B1047 19.73 -153.97 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH B3006 DISTANCE = 6.83 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CD A2086 CD REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 823 SG REMARK 620 2 HIS A 886 ND1 95.9 REMARK 620 3 HOH A3178 O 125.3 89.0 REMARK 620 4 GLU B1017 OE1 106.6 87.2 128.0 REMARK 620 5 GLU B1017 OE2 154.0 99.9 75.7 54.2 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CD A2087 CD REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 894 OE1 REMARK 620 2 GLU A 894 OE2 46.5 REMARK 620 3 HIS A1076 ND1 96.0 91.5 REMARK 620 4 GLU A1079 OE1 75.0 121.5 93.5 REMARK 620 5 GLU A1079 OE2 129.5 170.5 97.7 55.8 REMARK 620 6 HIS A1083 ND1 82.4 84.5 175.6 90.1 86.4 REMARK 620 7 HIS A1085 NE2 141.4 94.9 84.0 143.6 88.4 94.7 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CD A2091 CD REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ALA A 933 O REMARK 620 2 HOH A3217 O 89.1 REMARK 620 3 HOH A3221 O 102.1 108.3 REMARK 620 4 HOH A3225 O 89.3 162.5 89.1 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CD A2089 CD REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 947 NE2 REMARK 620 2 HIS A1080 NE2 88.9 REMARK 620 3 HOH A3233 O 92.1 102.0 REMARK 620 4 HOH A3238 O 93.8 103.3 154.1 REMARK 620 5 HOH A3353 O 174.1 93.2 82.1 91.0 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CD A2088 CD REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A1007 OE1 REMARK 620 2 GLU A1007 OE2 55.6 REMARK 620 3 HOH A3290 O 91.9 99.2 REMARK 620 4 HOH A3380 O 96.6 138.5 46.8 REMARK 620 5 HIS B1082 NE2 149.5 93.9 95.0 109.8 REMARK 620 6 HIS B1084 NE2 91.4 114.2 141.3 94.5 101.3 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CD B2086 CD REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A1017 OE2 REMARK 620 2 GLU A1017 OE1 53.1 REMARK 620 3 CYS B 823 SG 156.0 108.3 REMARK 620 4 HIS B 886 ND1 101.0 90.3 93.5 REMARK 620 5 HOH B3185 O 73.3 125.2 126.4 89.4 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CD B2088 CD REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A1082 NE2 REMARK 620 2 HIS A1084 NE2 102.5 REMARK 620 3 GLU B1007 OE2 99.2 115.1 REMARK 620 4 GLU B1007 OE1 154.6 89.5 55.4 REMARK 620 5 HOH B3278 O 92.9 141.1 96.9 91.4 REMARK 620 6 HOH B3279 O 106.1 94.9 135.2 94.9 46.3 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CD B2087 CD REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU B 894 OE2 REMARK 620 2 GLU B 894 OE1 46.3 REMARK 620 3 HIS B1076 ND1 89.7 93.1 REMARK 620 4 GLU B1079 OE2 173.5 132.7 96.7 REMARK 620 5 GLU B1079 OE1 123.9 77.5 94.9 55.6 REMARK 620 6 HIS B1083 ND1 87.4 85.0 177.1 86.2 86.8 REMARK 620 7 HIS B1085 NE2 91.0 137.3 84.2 89.8 145.2 95.7 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CD B2091 CD REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU B 926 O REMARK 620 2 TYR B 929 O 77.5 REMARK 620 3 HOH B3212 O 79.5 86.7 REMARK 620 4 HOH B3216 O 156.8 115.4 82.1 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CD B2089 CD REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 947 NE2 REMARK 620 2 HIS B1080 NE2 91.8 REMARK 620 3 HOH B3228 O 96.3 106.8 REMARK 620 4 HOH B3233 O 90.3 101.2 151.0 REMARK 620 5 HOH B3347 O 169.8 98.1 78.5 90.3 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CD A 2086 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CD A 2087 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CD A 2088 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CD A 2089 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CD A 2090 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CD B 2086 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CD B 2087 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CD B 2088 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CD B 2089 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CD B 2090 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CD A 2091 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CD B 2091 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3ZI6 RELATED DB: PDB REMARK 900 STRUCTURE OF THERMOLYSIN SOLVED BY SAD FROM DATA COLLECTED BY REMARK 900 DIRECT DATA COLLECTION (DDC) USING THE GROB ROBOT GONIOMETER DBREF 3ZI7 A 792 1077 UNP P51584 XYNY_CLOTM 792 1077 DBREF 3ZI7 B 792 1077 UNP P51584 XYNY_CLOTM 792 1077 SEQADV 3ZI7 MSE A 789 UNP P51584 EXPRESSION TAG SEQADV 3ZI7 ALA A 790 UNP P51584 EXPRESSION TAG SEQADV 3ZI7 SER A 791 UNP P51584 EXPRESSION TAG SEQADV 3ZI7 GLU A 1017 UNP P51584 ASP 1017 CONFLICT SEQADV 3ZI7 ASP A 1018 UNP P51584 HIS 1018 CONFLICT SEQADV 3ZI7 LEU A 1078 UNP P51584 EXPRESSION TAG SEQADV 3ZI7 GLU A 1079 UNP P51584 EXPRESSION TAG SEQADV 3ZI7 HIS A 1080 UNP P51584 EXPRESSION TAG SEQADV 3ZI7 HIS A 1081 UNP P51584 EXPRESSION TAG SEQADV 3ZI7 HIS A 1082 UNP P51584 EXPRESSION TAG SEQADV 3ZI7 HIS A 1083 UNP P51584 EXPRESSION TAG SEQADV 3ZI7 HIS A 1084 UNP P51584 EXPRESSION TAG SEQADV 3ZI7 HIS A 1085 UNP P51584 EXPRESSION TAG SEQADV 3ZI7 MSE B 789 UNP P51584 EXPRESSION TAG SEQADV 3ZI7 ALA B 790 UNP P51584 EXPRESSION TAG SEQADV 3ZI7 SER B 791 UNP P51584 EXPRESSION TAG SEQADV 3ZI7 GLU B 1017 UNP P51584 ASP 1017 CONFLICT SEQADV 3ZI7 ASP B 1018 UNP P51584 HIS 1018 CONFLICT SEQADV 3ZI7 LEU B 1078 UNP P51584 EXPRESSION TAG SEQADV 3ZI7 GLU B 1079 UNP P51584 EXPRESSION TAG SEQADV 3ZI7 HIS B 1080 UNP P51584 EXPRESSION TAG SEQADV 3ZI7 HIS B 1081 UNP P51584 EXPRESSION TAG SEQADV 3ZI7 HIS B 1082 UNP P51584 EXPRESSION TAG SEQADV 3ZI7 HIS B 1083 UNP P51584 EXPRESSION TAG SEQADV 3ZI7 HIS B 1084 UNP P51584 EXPRESSION TAG SEQADV 3ZI7 HIS B 1085 UNP P51584 EXPRESSION TAG SEQRES 1 A 297 MSE ALA SER ASP LYS PHE PRO VAL ALA GLU ASN PRO SER SEQRES 2 A 297 SER SER PHE LYS TYR GLU SER ALA VAL GLN TYR ARG PRO SEQRES 3 A 297 ALA PRO ASP SER TYR LEU ASN PRO CYS PRO GLN ALA GLY SEQRES 4 A 297 ARG ILE VAL LYS GLU THR TYR THR GLY ILE ASN GLY THR SEQRES 5 A 297 LYS SER LEU ASN VAL TYR LEU PRO TYR GLY TYR ASP PRO SEQRES 6 A 297 ASN LYS LYS TYR ASN ILE PHE TYR LEU MSE HIS GLY GLY SEQRES 7 A 297 GLY GLU ASN GLU ASN THR ILE PHE SER ASN ASP VAL LYS SEQRES 8 A 297 LEU GLN ASN ILE LEU ASP HIS ALA ILE MSE ASN GLY GLU SEQRES 9 A 297 LEU GLU PRO LEU ILE VAL VAL THR PRO THR PHE ASN GLY SEQRES 10 A 297 GLY ASN CYS THR ALA GLN ASN PHE TYR GLN GLU PHE ARG SEQRES 11 A 297 GLN ASN VAL ILE PRO PHE VAL GLU SER LYS TYR SER THR SEQRES 12 A 297 TYR ALA GLU SER THR THR PRO GLN GLY ILE ALA ALA SER SEQRES 13 A 297 ARG MSE HIS ARG GLY PHE GLY GLY PHE SEP MSE GLY GLY SEQRES 14 A 297 LEU THR THR TRP TYR VAL MSE VAL ASN CYS LEU ASP TYR SEQRES 15 A 297 VAL ALA TYR PHE MSE PRO LEU SER GLY ASP TYR TRP TYR SEQRES 16 A 297 GLY ASN SER PRO GLN ASP LYS ALA ASN SER ILE ALA GLU SEQRES 17 A 297 ALA ILE ASN ARG SER GLY LEU SER LYS ARG GLU TYR PHE SEQRES 18 A 297 VAL PHE ALA ALA THR GLY SER GLU ASP ILE ALA TYR ALA SEQRES 19 A 297 ASN MSE ASN PRO GLN ILE GLU ALA MSE LYS ALA LEU PRO SEQRES 20 A 297 HIS PHE ASP TYR THR SER ASP PHE SER LYS GLY ASN PHE SEQRES 21 A 297 TYR PHE LEU VAL ALA PRO GLY ALA THR HIS TRP TRP GLY SEQRES 22 A 297 TYR VAL ARG HIS TYR ILE TYR ASP ALA LEU PRO TYR PHE SEQRES 23 A 297 PHE HIS GLU LEU GLU HIS HIS HIS HIS HIS HIS SEQRES 1 B 297 MSE ALA SER ASP LYS PHE PRO VAL ALA GLU ASN PRO SER SEQRES 2 B 297 SER SER PHE LYS TYR GLU SER ALA VAL GLN TYR ARG PRO SEQRES 3 B 297 ALA PRO ASP SER TYR LEU ASN PRO CYS PRO GLN ALA GLY SEQRES 4 B 297 ARG ILE VAL LYS GLU THR TYR THR GLY ILE ASN GLY THR SEQRES 5 B 297 LYS SER LEU ASN VAL TYR LEU PRO TYR GLY TYR ASP PRO SEQRES 6 B 297 ASN LYS LYS TYR ASN ILE PHE TYR LEU MSE HIS GLY GLY SEQRES 7 B 297 GLY GLU ASN GLU ASN THR ILE PHE SER ASN ASP VAL LYS SEQRES 8 B 297 LEU GLN ASN ILE LEU ASP HIS ALA ILE MSE ASN GLY GLU SEQRES 9 B 297 LEU GLU PRO LEU ILE VAL VAL THR PRO THR PHE ASN GLY SEQRES 10 B 297 GLY ASN CYS THR ALA GLN ASN PHE TYR GLN GLU PHE ARG SEQRES 11 B 297 GLN ASN VAL ILE PRO PHE VAL GLU SER LYS TYR SER THR SEQRES 12 B 297 TYR ALA GLU SER THR THR PRO GLN GLY ILE ALA ALA SER SEQRES 13 B 297 ARG MSE HIS ARG GLY PHE GLY GLY PHE SEP MSE GLY GLY SEQRES 14 B 297 LEU THR THR TRP TYR VAL MSE VAL ASN CYS LEU ASP TYR SEQRES 15 B 297 VAL ALA TYR PHE MSE PRO LEU SER GLY ASP TYR TRP TYR SEQRES 16 B 297 GLY ASN SER PRO GLN ASP LYS ALA ASN SER ILE ALA GLU SEQRES 17 B 297 ALA ILE ASN ARG SER GLY LEU SER LYS ARG GLU TYR PHE SEQRES 18 B 297 VAL PHE ALA ALA THR GLY SER GLU ASP ILE ALA TYR ALA SEQRES 19 B 297 ASN MSE ASN PRO GLN ILE GLU ALA MSE LYS ALA LEU PRO SEQRES 20 B 297 HIS PHE ASP TYR THR SER ASP PHE SER LYS GLY ASN PHE SEQRES 21 B 297 TYR PHE LEU VAL ALA PRO GLY ALA THR HIS TRP TRP GLY SEQRES 22 B 297 TYR VAL ARG HIS TYR ILE TYR ASP ALA LEU PRO TYR PHE SEQRES 23 B 297 PHE HIS GLU LEU GLU HIS HIS HIS HIS HIS HIS MODRES 3ZI7 MSE A 863 MET SELENOMETHIONINE MODRES 3ZI7 MSE A 889 MET SELENOMETHIONINE MODRES 3ZI7 MSE A 946 MET SELENOMETHIONINE MODRES 3ZI7 SEP A 954 SER PHOSPHOSERINE MODRES 3ZI7 MSE A 955 MET SELENOMETHIONINE MODRES 3ZI7 MSE A 964 MET SELENOMETHIONINE MODRES 3ZI7 MSE A 975 MET SELENOMETHIONINE MODRES 3ZI7 MSE A 1024 MET SELENOMETHIONINE MODRES 3ZI7 MSE A 1031 MET SELENOMETHIONINE MODRES 3ZI7 MSE B 863 MET SELENOMETHIONINE MODRES 3ZI7 MSE B 889 MET SELENOMETHIONINE MODRES 3ZI7 MSE B 946 MET SELENOMETHIONINE MODRES 3ZI7 SEP B 954 SER PHOSPHOSERINE MODRES 3ZI7 MSE B 955 MET SELENOMETHIONINE MODRES 3ZI7 MSE B 964 MET SELENOMETHIONINE MODRES 3ZI7 MSE B 975 MET SELENOMETHIONINE MODRES 3ZI7 MSE B 1024 MET SELENOMETHIONINE MODRES 3ZI7 MSE B 1031 MET SELENOMETHIONINE HET MSE A 863 8 HET MSE A 889 8 HET MSE A 946 8 HET SEP A 954 10 HET MSE A 955 11 HET MSE A 964 8 HET MSE A 975 8 HET MSE A1024 8 HET MSE A1031 8 HET MSE B 863 8 HET MSE B 889 8 HET MSE B 946 8 HET SEP B 954 10 HET MSE B 955 11 HET MSE B 964 8 HET MSE B 975 8 HET MSE B1024 8 HET MSE B1031 8 HET CD A2086 1 HET CD A2087 1 HET CD A2088 1 HET CD A2089 1 HET CD A2090 1 HET CD A2091 1 HET CD B2086 1 HET CD B2087 1 HET CD B2088 1 HET CD B2089 1 HET CD B2090 1 HET CD B2091 1 HETNAM MSE SELENOMETHIONINE HETNAM SEP PHOSPHOSERINE HETNAM CD CADMIUM ION HETSYN SEP PHOSPHONOSERINE FORMUL 1 MSE 16(C5 H11 N O2 SE) FORMUL 1 SEP 2(C3 H8 N O6 P) FORMUL 3 CD 12(CD 2+) FORMUL 15 HOH *754(H2 O) HELIX 1 1 PRO A 816 ASN A 821 5 6 HELIX 2 2 LYS A 879 ASN A 890 1 12 HELIX 3 3 ASN A 912 ASN A 920 1 9 HELIX 4 4 ASN A 920 TYR A 929 1 10 HELIX 5 5 THR A 937 ALA A 943 1 7 HELIX 6 6 SER A 944 MSE A 946 5 3 HELIX 7 7 SEP A 954 LEU A 968 1 15 HELIX 8 8 SER A 986 GLY A 1002 1 17 HELIX 9 9 ILE A 1019 ALA A 1033 1 15 HELIX 10 10 TRP A 1059 LEU A 1071 1 13 HELIX 11 11 PRO A 1072 PHE A 1074 5 3 HELIX 12 12 PRO B 816 ASN B 821 5 6 HELIX 13 13 LYS B 879 ASN B 890 1 12 HELIX 14 14 ASN B 912 ASN B 920 1 9 HELIX 15 15 ASN B 920 TYR B 929 1 10 HELIX 16 16 THR B 937 ALA B 943 1 7 HELIX 17 17 SER B 944 MSE B 946 5 3 HELIX 18 18 SEP B 954 LEU B 968 1 15 HELIX 19 19 SER B 986 GLY B 1002 1 17 HELIX 20 20 ALA B 1020 LEU B 1034 1 15 HELIX 21 21 TRP B 1059 LEU B 1071 1 13 HELIX 22 22 PRO B 1072 PHE B 1074 5 3 SHEET 1 AA 8 ARG A 828 GLY A 836 0 SHEET 2 AA 8 GLY A 839 LEU A 847 -1 O GLY A 839 N GLY A 836 SHEET 3 AA 8 LEU A 896 THR A 900 -1 O VAL A 898 N TYR A 846 SHEET 4 AA 8 ASN A 858 MSE A 863 1 O ASN A 858 N ILE A 897 SHEET 5 AA 8 ARG A 948 PHE A 953 1 O GLY A 949 N TYR A 861 SHEET 6 AA 8 TYR A 973 LEU A 977 1 O TYR A 973 N PHE A 950 SHEET 7 AA 8 PHE A1009 GLY A1015 1 O PHE A1009 N PHE A 974 SHEET 8 AA 8 PHE A1048 ALA A1053 1 O TYR A1049 N ALA A1012 SHEET 1 BA 8 ARG B 828 GLY B 836 0 SHEET 2 BA 8 GLY B 839 LEU B 847 -1 O GLY B 839 N GLY B 836 SHEET 3 BA 8 LEU B 896 THR B 900 -1 O VAL B 898 N TYR B 846 SHEET 4 BA 8 ASN B 858 MSE B 863 1 O ASN B 858 N ILE B 897 SHEET 5 BA 8 ARG B 948 PHE B 953 1 O GLY B 949 N TYR B 861 SHEET 6 BA 8 TYR B 973 LEU B 977 1 O TYR B 973 N PHE B 950 SHEET 7 BA 8 PHE B1009 GLY B1015 1 O PHE B1009 N PHE B 974 SHEET 8 BA 8 PHE B1048 ALA B1053 1 O TYR B1049 N ALA B1012 LINK C LEU A 862 N MSE A 863 1555 1555 1.34 LINK C MSE A 863 N HIS A 864 1555 1555 1.32 LINK C ILE A 888 N MSE A 889 1555 1555 1.32 LINK C MSE A 889 N ASN A 890 1555 1555 1.34 LINK C ARG A 945 N MSE A 946 1555 1555 1.33 LINK C MSE A 946 N HIS A 947 1555 1555 1.33 LINK C PHE A 953 N SEP A 954 1555 1555 1.34 LINK C SEP A 954 N MSE A 955 1555 1555 1.34 LINK C MSE A 955 N GLY A 956 1555 1555 1.34 LINK C VAL A 963 N MSE A 964 1555 1555 1.33 LINK C MSE A 964 N VAL A 965 1555 1555 1.31 LINK C PHE A 974 N MSE A 975 1555 1555 1.31 LINK C MSE A 975 N PRO A 976 1555 1555 1.36 LINK C ASN A1023 N MSE A1024 1555 1555 1.33 LINK C MSE A1024 N ASN A1025 1555 1555 1.30 LINK C ALA A1030 N MSE A1031 1555 1555 1.33 LINK C MSE A1031 N LYS A1032 1555 1555 1.31 LINK C LEU B 862 N MSE B 863 1555 1555 1.32 LINK C MSE B 863 N HIS B 864 1555 1555 1.32 LINK C ILE B 888 N MSE B 889 1555 1555 1.34 LINK C MSE B 889 N ASN B 890 1555 1555 1.32 LINK C ARG B 945 N MSE B 946 1555 1555 1.33 LINK C MSE B 946 N HIS B 947 1555 1555 1.30 LINK C PHE B 953 N SEP B 954 1555 1555 1.32 LINK C SEP B 954 N MSE B 955 1555 1555 1.34 LINK C MSE B 955 N GLY B 956 1555 1555 1.34 LINK C VAL B 963 N MSE B 964 1555 1555 1.33 LINK C MSE B 964 N VAL B 965 1555 1555 1.33 LINK C PHE B 974 N MSE B 975 1555 1555 1.32 LINK C MSE B 975 N PRO B 976 1555 1555 1.37 LINK C ASN B1023 N MSE B1024 1555 1555 1.34 LINK C MSE B1024 N ASN B1025 1555 1555 1.33 LINK C ALA B1030 N MSE B1031 1555 1555 1.32 LINK C MSE B1031 N LYS B1032 1555 1555 1.32 LINK SG CYS A 823 CD CD A2086 1555 1555 2.53 LINK ND1 HIS A 886 CD CD A2086 1555 1555 2.33 LINK OE1 GLU A 894 CD CD A2087 1555 1555 3.10 LINK OE2 GLU A 894 CD CD A2087 1555 1555 2.16 LINK O ALA A 933 CD CD A2091 1555 1555 2.51 LINK NE2 HIS A 947 CD CD A2089 1555 1555 2.39 LINK OE1 GLU A1007 CD CD A2088 1555 1555 2.54 LINK OE2 GLU A1007 CD CD A2088 1555 1555 2.13 LINK OE2 GLU A1017 CD CD B2086 2564 1555 2.48 LINK OE1 GLU A1017 CD CD B2086 2564 1555 2.47 LINK ND1 HIS A1076 CD CD A2087 1555 1555 2.46 LINK OE1 GLU A1079 CD CD A2087 1555 1555 2.26 LINK OE2 GLU A1079 CD CD A2087 1555 1555 2.41 LINK NE2 HIS A1080 CD CD A2089 1555 1555 2.11 LINK NE2 HIS A1082 CD CD B2088 1655 1555 2.24 LINK ND1 HIS A1083 CD CD A2087 1555 1555 2.29 LINK NE2 HIS A1084 CD CD B2088 1655 1555 2.22 LINK NE2 HIS A1085 CD CD A2087 1555 1555 2.28 LINK CD CD A2086 O HOH A3178 1555 1555 2.20 LINK CD CD A2086 OE1 GLU B1017 1555 3545 2.38 LINK CD CD A2086 OE2 GLU B1017 1555 3545 2.49 LINK CD CD A2088 O HOH A3290 1555 1555 2.49 LINK CD CD A2088 O HOH A3380 1555 1555 2.42 LINK CD CD A2088 NE2 HIS B1082 1555 1455 2.32 LINK CD CD A2088 NE2 HIS B1084 1555 1455 2.27 LINK CD CD A2089 O HOH A3233 1555 1555 2.37 LINK CD CD A2089 O HOH A3238 1555 1555 2.37 LINK CD CD A2089 O HOH A3353 1555 1555 2.68 LINK CD CD A2090 O HOH A3382 1555 1555 2.45 LINK CD CD A2091 O HOH A3217 1555 1555 2.55 LINK CD CD A2091 O HOH A3221 1555 1555 2.60 LINK CD CD A2091 O HOH A3225 1555 1555 2.66 LINK SG CYS B 823 CD CD B2086 1555 1555 2.46 LINK ND1 HIS B 886 CD CD B2086 1555 1555 2.34 LINK OE2 GLU B 894 CD CD B2087 1555 1555 2.32 LINK OE1 GLU B 894 CD CD B2087 1555 1555 2.94 LINK O GLU B 926 CD CD B2091 1555 1555 2.52 LINK O TYR B 929 CD CD B2091 1555 1555 2.56 LINK NE2 HIS B 947 CD CD B2089 1555 1555 2.43 LINK OE2 GLU B1007 CD CD B2088 1555 1555 2.17 LINK OE1 GLU B1007 CD CD B2088 1555 1555 2.48 LINK ND1 HIS B1076 CD CD B2087 1555 1555 2.47 LINK OE2 GLU B1079 CD CD B2087 1555 1555 2.39 LINK OE1 GLU B1079 CD CD B2087 1555 1555 2.15 LINK NE2 HIS B1080 CD CD B2089 1555 1555 2.07 LINK ND1 HIS B1083 CD CD B2087 1555 1555 2.37 LINK NE2 HIS B1085 CD CD B2087 1555 1555 2.31 LINK CD CD B2086 O HOH B3185 1555 1555 2.21 LINK CD CD B2088 O HOH B3278 1555 1555 2.48 LINK CD CD B2088 O HOH B3279 1555 1555 2.37 LINK CD CD B2089 O HOH B3228 1555 1555 2.39 LINK CD CD B2089 O HOH B3233 1555 1555 2.23 LINK CD CD B2089 O HOH B3347 1555 1555 2.64 LINK CD CD B2090 O HOH B3367 1555 1555 2.97 LINK CD CD B2091 O HOH B3212 1555 1555 2.56 LINK CD CD B2091 O HOH B3216 1555 1555 2.63 SITE 1 AC1 5 CYS A 823 HIS A 886 MSE A 889 HOH A3178 SITE 2 AC1 5 GLU B1017 SITE 1 AC2 5 GLU A 894 HIS A1076 GLU A1079 HIS A1083 SITE 2 AC2 5 HIS A1085 SITE 1 AC3 5 GLU A1007 HOH A3290 HOH A3380 HIS B1082 SITE 2 AC3 5 HIS B1084 SITE 1 AC4 6 HIS A 947 HIS A1080 HOH A3233 HOH A3237 SITE 2 AC4 6 HOH A3238 HOH A3353 SITE 1 AC5 2 HIS A1081 HOH A3382 SITE 1 AC6 5 GLU A1017 CYS B 823 HIS B 886 MSE B 889 SITE 2 AC6 5 HOH B3185 SITE 1 AC7 5 GLU B 894 HIS B1076 GLU B1079 HIS B1083 SITE 2 AC7 5 HIS B1085 SITE 1 AC8 5 HIS A1082 HIS A1084 GLU B1007 HOH B3278 SITE 2 AC8 5 HOH B3279 SITE 1 AC9 6 HIS B 947 HIS B1080 HOH B3228 HOH B3232 SITE 2 AC9 6 HOH B3233 HOH B3347 SITE 1 BC1 2 HIS B1081 HOH B3367 SITE 1 BC2 4 ALA A 933 HOH A3217 HOH A3221 HOH A3225 SITE 1 BC3 4 GLU B 926 TYR B 929 HOH B3212 HOH B3216 CRYST1 65.609 108.639 113.317 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015242 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009205 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008825 0.00000 CONECT 171 4650 CONECT 491 497 CONECT 497 491 498 CONECT 498 497 499 501 CONECT 499 498 500 505 CONECT 500 499 CONECT 501 498 502 CONECT 502 501 503 CONECT 503 502 504 CONECT 504 503 CONECT 505 499 CONECT 680 4650 CONECT 691 697 CONECT 697 691 698 CONECT 698 697 699 701 CONECT 699 698 700 705 CONECT 700 699 CONECT 701 698 702 CONECT 702 701 703 CONECT 703 702 704 CONECT 704 703 CONECT 705 699 CONECT 744 4651 CONECT 745 4651 CONECT 1060 4655 CONECT 1137 1146 CONECT 1146 1137 1147 CONECT 1147 1146 1148 1150 CONECT 1148 1147 1149 1154 CONECT 1149 1148 CONECT 1150 1147 1151 CONECT 1151 1150 1152 CONECT 1152 1151 1153 CONECT 1153 1152 CONECT 1154 1148 CONECT 1163 4653 CONECT 1200 1209 CONECT 1209 1200 1210 CONECT 1210 1209 1211 1213 CONECT 1211 1210 1212 CONECT 1212 1211 1215 CONECT 1213 1210 1214 1219 CONECT 1214 1213 CONECT 1215 1212 1216 1217 1218 CONECT 1216 1215 CONECT 1217 1215 CONECT 1218 1215 CONECT 1219 1213 1220 CONECT 1220 1219 1221 1223 CONECT 1221 1220 1222 1230 CONECT 1222 1221 CONECT 1223 1220 1224 1225 CONECT 1224 1223 1226 CONECT 1225 1223 1227 CONECT 1226 1224 1228 CONECT 1227 1225 1229 CONECT 1228 1226 CONECT 1229 1227 CONECT 1230 1221 CONECT 1288 1293 CONECT 1293 1288 1294 CONECT 1294 1293 1295 1297 CONECT 1295 1294 1296 1301 CONECT 1296 1295 CONECT 1297 1294 1298 CONECT 1298 1297 1299 CONECT 1299 1298 1300 CONECT 1300 1299 CONECT 1301 1295 CONECT 1378 1387 CONECT 1387 1378 1388 CONECT 1388 1387 1389 1391 CONECT 1389 1388 1390 1395 CONECT 1390 1389 CONECT 1391 1388 1392 CONECT 1392 1391 1393 CONECT 1393 1392 1394 CONECT 1394 1393 CONECT 1395 1389 CONECT 1644 4652 CONECT 1645 4652 CONECT 1766 1772 CONECT 1772 1766 1773 CONECT 1773 1772 1774 1776 CONECT 1774 1773 1775 1780 CONECT 1775 1774 CONECT 1776 1773 1777 CONECT 1777 1776 1778 CONECT 1778 1777 1779 CONECT 1779 1778 CONECT 1780 1774 CONECT 1823 1826 CONECT 1826 1823 1827 CONECT 1827 1826 1828 1830 CONECT 1828 1827 1829 1834 CONECT 1829 1828 CONECT 1830 1827 1831 CONECT 1831 1830 1832 CONECT 1832 1831 1833 CONECT 1833 1832 CONECT 1834 1828 CONECT 2229 4651 CONECT 2257 4651 CONECT 2258 4651 CONECT 2270 4653 CONECT 2298 4651 CONECT 2321 4651 CONECT 2494 4656 CONECT 2813 2819 CONECT 2819 2813 2820 CONECT 2820 2819 2821 2823 CONECT 2821 2820 2822 2827 CONECT 2822 2821 CONECT 2823 2820 2824 CONECT 2824 2823 2825 CONECT 2825 2824 2826 CONECT 2826 2825 CONECT 2827 2821 CONECT 3002 4656 CONECT 3013 3019 CONECT 3019 3013 3020 CONECT 3020 3019 3021 3023 CONECT 3021 3020 3022 3027 CONECT 3022 3021 CONECT 3023 3020 3024 CONECT 3024 3023 3025 CONECT 3025 3024 3026 CONECT 3026 3025 CONECT 3027 3021 CONECT 3066 4657 CONECT 3067 4657 CONECT 3324 4661 CONECT 3349 4661 CONECT 3464 3473 CONECT 3473 3464 3474 CONECT 3474 3473 3475 3477 CONECT 3475 3474 3476 3481 CONECT 3476 3475 CONECT 3477 3474 3478 CONECT 3478 3477 3479 CONECT 3479 3478 3480 CONECT 3480 3479 CONECT 3481 3475 CONECT 3490 4659 CONECT 3527 3536 CONECT 3536 3527 3537 CONECT 3537 3536 3538 3540 CONECT 3538 3537 3539 CONECT 3539 3538 3542 CONECT 3540 3537 3541 3546 CONECT 3541 3540 CONECT 3542 3539 3543 3544 3545 CONECT 3543 3542 CONECT 3544 3542 CONECT 3545 3542 CONECT 3546 3540 3547 CONECT 3547 3546 3548 3550 CONECT 3548 3547 3549 3557 CONECT 3549 3548 CONECT 3550 3547 3551 3552 CONECT 3551 3550 3553 CONECT 3552 3550 3554 CONECT 3553 3551 3555 CONECT 3554 3552 3556 CONECT 3555 3553 CONECT 3556 3554 CONECT 3557 3548 CONECT 3618 3623 CONECT 3623 3618 3624 CONECT 3624 3623 3625 3627 CONECT 3625 3624 3626 3631 CONECT 3626 3625 CONECT 3627 3624 3628 CONECT 3628 3627 3629 CONECT 3629 3628 3630 CONECT 3630 3629 CONECT 3631 3625 CONECT 3708 3717 CONECT 3717 3708 3718 CONECT 3718 3717 3719 3721 CONECT 3719 3718 3720 3725 CONECT 3720 3719 CONECT 3721 3718 3722 CONECT 3722 3721 3723 CONECT 3723 3722 3724 CONECT 3724 3723 CONECT 3725 3719 CONECT 3978 4658 CONECT 3979 4658 CONECT 4100 4106 CONECT 4106 4100 4107 CONECT 4107 4106 4108 4110 CONECT 4108 4107 4109 4114 CONECT 4109 4108 CONECT 4110 4107 4111 CONECT 4111 4110 4112 CONECT 4112 4111 4113 CONECT 4113 4112 CONECT 4114 4108 CONECT 4157 4160 CONECT 4160 4157 4161 CONECT 4161 4160 4162 4164 CONECT 4162 4161 4163 4168 CONECT 4163 4162 CONECT 4164 4161 4165 CONECT 4165 4164 4166 CONECT 4166 4165 4167 CONECT 4167 4166 CONECT 4168 4162 CONECT 4558 4657 CONECT 4586 4657 CONECT 4587 4657 CONECT 4597 4659 CONECT 4624 4657 CONECT 4647 4657 CONECT 4650 171 680 4839 CONECT 4651 744 745 2229 2257 CONECT 4651 2258 2298 2321 CONECT 4652 1644 1645 4951 5041 CONECT 4653 1163 2270 4894 4899 CONECT 4653 5014 CONECT 4654 5043 CONECT 4655 1060 4878 4882 4886 CONECT 4656 2494 3002 5231 CONECT 4657 3066 3067 4558 4586 CONECT 4657 4587 4624 4647 CONECT 4658 3978 3979 5324 5325 CONECT 4659 3490 4597 5274 5279 CONECT 4659 5393 CONECT 4660 5413 CONECT 4661 3324 3349 5258 5262 CONECT 4839 4650 CONECT 4878 4655 CONECT 4882 4655 CONECT 4886 4655 CONECT 4894 4653 CONECT 4899 4653 CONECT 4951 4652 CONECT 5014 4653 CONECT 5041 4652 CONECT 5043 4654 CONECT 5231 4656 CONECT 5258 4661 CONECT 5262 4661 CONECT 5274 4659 CONECT 5279 4659 CONECT 5324 4658 CONECT 5325 4658 CONECT 5393 4659 CONECT 5413 4660 MASTER 582 0 30 22 16 0 20 6 5346 2 250 46 END