HEADER METAL-BINDING PROTEIN 21-JAN-13 3ZK3 OBSLTE 13-MAY-15 3ZK3 5A1J TITLE PERIPLASMIC BINDING PROTEIN CEUE IN COMPLEX WITH FERRIC 4-LICAM COMPND MOL_ID: 1; COMPND 2 MOLECULE: ENTEROCHELIN UPTAKE PERIPLASMIC BINDING PROTEIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: N-TERMINAL TRUNCATION, RESIDUES 44-330; COMPND 5 SYNONYM: CEUE; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CAMPYLOBACTER JEJUNI; SOURCE 3 ORGANISM_TAXID: 197; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PET-YSBLIC KEYWDS METAL-BINDING PROTEIN, ENTEROBACTIN UPTAKE, SIDEROPHORE, BINDING KEYWDS 2 PROTEIN, TETRADENTATE EXPDTA X-RAY DIFFRACTION AUTHOR D.J.RAINES,O.V.MOROZ,K.S.WILSON,A.K.DUHME-KLAIR REVDAT 3 13-MAY-15 3ZK3 1 OBSLTE REVDAT 2 01-MAY-13 3ZK3 1 JRNL REVDAT 1 03-APR-13 3ZK3 0 JRNL AUTH D.J.RAINES,O.V.MOROZ,K.S.WILSON,A.DUHME-KLAIR JRNL TITL INTERACTIONS OF A PERIPLASMIC BINDING PROTEIN WITH A JRNL TITL 2 TETRADENTATE SIDEROPHORE MIMIC. JRNL REF ANGEW.CHEM.INT.ED.ENGL. V. 52 4595 2013 JRNL REFN ISSN 1433-7851 JRNL PMID 23512642 JRNL DOI 10.1002/ANIE.201300751 REMARK 2 REMARK 2 RESOLUTION. 1.89 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.6.0117 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.89 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 33.65 REMARK 3 DATA CUTOFF (SIGMA(F)) : NONE REMARK 3 COMPLETENESS FOR RANGE (%) : 98.16 REMARK 3 NUMBER OF REFLECTIONS : 20945 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.26370 REMARK 3 R VALUE (WORKING SET) : 0.26117 REMARK 3 FREE R VALUE : 0.30998 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.2 REMARK 3 FREE R VALUE TEST SET COUNT : 1146 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.889 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.937 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1213 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 78.89 REMARK 3 BIN R VALUE (WORKING SET) : 0.292 REMARK 3 BIN FREE R VALUE SET COUNT : 65 REMARK 3 BIN FREE R VALUE : 0.304 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2223 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 27 REMARK 3 SOLVENT ATOMS : 48 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 19.505 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -3.71 REMARK 3 B22 (A**2) : -4.30 REMARK 3 B33 (A**2) : 8.00 REMARK 3 B12 (A**2) : 0.00 REMARK 3 B13 (A**2) : 0.00 REMARK 3 B23 (A**2) : 0.00 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.047 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.042 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.210 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 14.883 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.873 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.820 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2282 ; 0.016 ; 0.020 REMARK 3 BOND LENGTHS OTHERS (A): 1544 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3082 ; 2.011 ; 1.998 REMARK 3 BOND ANGLES OTHERS (DEGREES): 3828 ; 1.151 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 286 ; 7.834 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 95 ;40.853 ;26.842 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 427 ;19.473 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 4 ; 9.075 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 357 ; 0.105 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2503 ; 0.008 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 399 ; 0.003 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TWIN DETAILS REMARK 3 NUMBER OF TWIN DOMAINS : 2 REMARK 3 TWIN DOMAIN : 1 REMARK 3 TWIN OPERATOR : H, K, L REMARK 3 TWIN FRACTION : 0.861 REMARK 3 TWIN DOMAIN : 2 REMARK 3 TWIN OPERATOR : -H, L, K REMARK 3 TWIN FRACTION : 0.139 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 24 A 310 REMARK 3 ORIGIN FOR THE GROUP (A): 1.3258 2.3280 2.4521 REMARK 3 T TENSOR REMARK 3 T11: 0.0508 T22: 0.1180 REMARK 3 T33: 0.0056 T12: -0.0038 REMARK 3 T13: 0.0054 T23: -0.0007 REMARK 3 L TENSOR REMARK 3 L11: 0.5538 L22: 0.4002 REMARK 3 L33: 0.2338 L12: 0.3566 REMARK 3 L13: 0.1864 L23: 0.2721 REMARK 3 S TENSOR REMARK 3 S11: 0.0341 S12: -0.1416 S13: -0.0075 REMARK 3 S21: -0.0162 S22: -0.0596 S23: 0.0136 REMARK 3 S31: 0.0138 S32: -0.0250 S33: 0.0255 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE REMARK 3 RIDING POSITIONS. POOR REFINEMENT STATISTICS BECAUSE REMARK 3 OF SPLIT SPOTS AND TWINNING REMARK 4 REMARK 4 3ZK3 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 21-JAN-13. REMARK 100 THE PDBE ID CODE IS EBI-55506. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 18-DEC-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I24 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97840 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL (PILATUS 6M) REMARK 200 DETECTOR MANUFACTURER : DECTRIS REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XIA2 REMARK 200 DATA SCALING SOFTWARE : XIA2 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 28929 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.61 REMARK 200 RESOLUTION RANGE LOW (A) : 44.96 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.0 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 200 DATA REDUNDANCY : 5.7 REMARK 200 R MERGE (I) : 0.05 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 18.30 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.61 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.65 REMARK 200 COMPLETENESS FOR SHELL (%) : 94.9 REMARK 200 DATA REDUNDANCY IN SHELL : 3 REMARK 200 R MERGE FOR SHELL (I) : 0.42 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.20 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 2CHU REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 43 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.2 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2M SODIUM NITRATE, 0.1M BIS REMARK 280 TRIS PROPANE PH 7.5, 20% PEG 3350 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 30.21000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 33.65000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 33.44500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 33.65000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 30.21000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 33.44500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 79 CE NZ REMARK 470 LYS A 83 NZ REMARK 470 LYS A 155 CE NZ REMARK 470 LYS A 161 CG CD CE NZ REMARK 470 LYS A 223 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O LYS A 48 O LEU A 156 2.00 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU A 31 N GLU A 31 CA 0.136 REMARK 500 GLY A 32 CA GLY A 32 C 0.105 REMARK 500 GLY A 32 N GLY A 32 CA 0.147 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 GLU A 31 CA - C - N ANGL. DEV. = 13.9 DEGREES REMARK 500 GLY A 32 C - N - CA ANGL. DEV. = 13.7 DEGREES REMARK 500 GLY A 228 C - N - CA ANGL. DEV. = -15.2 DEGREES REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 31 -149.26 138.22 REMARK 500 SER A 40 -46.22 28.45 REMARK 500 LYS A 48 -70.56 -37.77 REMARK 500 ASN A 49 73.40 -104.62 REMARK 500 ASN A 80 52.76 -113.12 REMARK 500 LYS A 109 70.08 44.05 REMARK 500 SER A 116 -159.80 -137.65 REMARK 500 SER A 120 -33.11 -37.14 REMARK 500 ASN A 193 119.84 -166.85 REMARK 500 SER A 194 -136.77 59.51 REMARK 500 LEU A 289 -73.74 -67.03 REMARK 500 ASN A 293 33.72 -85.22 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CHIRAL CENTERS REMARK 500 REMARK 500 UNEXPECTED CONFIGURATION OF THE FOLLOWING CHIRAL REMARK 500 CENTER(S) USING IMPROPER CA--C--CB--N CHIRALITY REMARK 500 FOR AMINO ACIDS AND C1'--O4'--N1(N9)--C2' FOR REMARK 500 NUCLEIC ACIDS OR EQUIVALENT ANGLE REMARK 500 M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,6X,F5.1,6X,A1,10X,A1,3X,A16) REMARK 500 REMARK 500 M RES CSSEQI IMPROPER EXPECTED FOUND DETAILS REMARK 500 GLU A 31 22.6 L L OUTSIDE RANGE REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FE A1311 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 227 NE2 REMARK 620 2 TYR A 288 OH 84.2 REMARK 620 3 LCM A1312 O24 100.8 104.9 REMARK 620 4 LCM A1312 O25 93.5 88.3 161.3 REMARK 620 5 LCM A1312 O26 158.6 76.7 93.4 76.6 REMARK 620 6 LCM A1312 O23 92.3 169.9 85.1 82.4 104.9 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FE A1311 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE LCM A1312 DBREF 3ZK3 A 24 310 UNP Q0P8Q4 Q0P8Q4_CAMJE 44 330 SEQRES 1 A 287 LEU PRO ILE SER MET SER ASP GLU GLY ASP SER PHE LEU SEQRES 2 A 287 VAL LYS ASP SER LEU GLY GLU ASN LYS ILE PRO LYS ASN SEQRES 3 A 287 PRO SER LYS VAL VAL ILE LEU ASP LEU GLY ILE LEU ASP SEQRES 4 A 287 THR PHE ASP ALA LEU LYS LEU ASN ASP LYS VAL VAL GLY SEQRES 5 A 287 VAL PRO ALA LYS ASN LEU PRO LYS TYR LEU GLN GLN PHE SEQRES 6 A 287 LYS ASN LYS PRO SER VAL GLY GLY VAL GLN GLN VAL ASP SEQRES 7 A 287 PHE GLU ALA ILE ASN ALA LEU LYS PRO ASP LEU ILE ILE SEQRES 8 A 287 ILE SER GLY ARG GLN SER LYS PHE TYR ASP LYS LEU LYS SEQRES 9 A 287 GLU ILE ALA PRO THR LEU PHE VAL GLY LEU ASP ASN ALA SEQRES 10 A 287 ASN PHE LEU SER SER PHE GLU ASN ASN VAL LEU SER VAL SEQRES 11 A 287 ALA LYS LEU TYR GLY LEU GLU LYS GLU ALA LEU GLU LYS SEQRES 12 A 287 ILE SER ASP ILE LYS ASN GLU ILE GLU LYS ALA LYS SER SEQRES 13 A 287 ILE VAL ASP GLU ASP LYS LYS ALA LEU ILE ILE LEU THR SEQRES 14 A 287 ASN SER ASN LYS ILE SER ALA PHE GLY PRO GLN SER ARG SEQRES 15 A 287 PHE GLY ILE ILE HIS ASP VAL LEU GLY ILE ASN ALA VAL SEQRES 16 A 287 ASP GLU ASN ILE LYS VAL GLY THR HIS GLY LYS SER ILE SEQRES 17 A 287 ASN SER GLU PHE ILE LEU GLU LYS ASN PRO ASP TYR ILE SEQRES 18 A 287 PHE VAL VAL ASP ARG ASN VAL ILE LEU GLY ASN LYS GLU SEQRES 19 A 287 ARG ALA GLN GLY ILE LEU ASP ASN ALA LEU VAL ALA LYS SEQRES 20 A 287 THR LYS ALA ALA GLN ASN LYS LYS ILE ILE TYR LEU ASP SEQRES 21 A 287 PRO GLU TYR TRP TYR LEU ALA SER GLY ASN GLY LEU GLU SEQRES 22 A 287 SER LEU LYS THR MET ILE LEU GLU ILE LYS ASN ALA VAL SEQRES 23 A 287 LYS HET FE A1311 1 HET LCM A1312 26 HETNAM FE FE (III) ION HETNAM LCM N,N'-BUTANE-1,4-DIYLBIS(2,3- HETNAM 2 LCM DIHYDROXYBENZAMIDE) HETSYN LCM 4-LICAM FORMUL 3 FE FE 3+ FORMUL 3 LCM C18 H20 N2 O6 FORMUL 4 HOH *48(H2 O) HELIX 1 1 ASP A 57 LEU A 67 1 11 HELIX 2 2 LEU A 69 ASP A 71 5 3 HELIX 3 3 PRO A 77 LEU A 81 5 5 HELIX 4 4 PRO A 82 LYS A 89 5 8 HELIX 5 5 ASP A 101 LYS A 109 1 9 HELIX 6 6 GLN A 119 LYS A 121 5 3 HELIX 7 7 PHE A 122 ALA A 130 1 9 HELIX 8 8 ASN A 141 TYR A 157 1 17 HELIX 9 9 LEU A 159 SER A 179 1 21 HELIX 10 10 GLY A 207 VAL A 212 1 6 HELIX 11 11 ASN A 232 ASN A 240 1 9 HELIX 12 12 ARG A 249 GLY A 254 1 6 HELIX 13 13 ARG A 258 LEU A 263 1 6 HELIX 14 14 ASN A 265 LYS A 270 1 6 HELIX 15 15 THR A 271 ASN A 276 1 6 HELIX 16 16 ASP A 283 TYR A 288 1 6 HELIX 17 17 GLY A 294 LYS A 310 1 17 SHEET 1 AA 3 SER A 27 GLU A 31 0 SHEET 2 AA 3 SER A 34 ASP A 39 -1 O LEU A 36 N ASP A 30 SHEET 3 AA 3 GLY A 42 PRO A 47 -1 O GLY A 42 N ASP A 39 SHEET 1 AB 4 VAL A 73 GLY A 75 0 SHEET 2 AB 4 VAL A 53 ILE A 55 1 O VAL A 53 N VAL A 74 SHEET 3 AB 4 LEU A 112 ILE A 115 1 O LEU A 112 N VAL A 54 SHEET 4 AB 4 THR A 132 PHE A 134 1 O LEU A 133 N ILE A 115 SHEET 1 AC 2 GLY A 95 GLY A 96 0 SHEET 2 AC 2 GLN A 99 VAL A 100 -1 O GLN A 99 N GLY A 96 SHEET 1 AD 2 ASN A 216 ALA A 217 0 SHEET 2 AD 2 LYS A 186 ASN A 193 1 N ALA A 187 O ASN A 216 SHEET 1 AE 5 LYS A 229 ILE A 231 0 SHEET 2 AE 5 LYS A 196 PHE A 200 -1 O ILE A 197 N ILE A 231 SHEET 3 AE 5 LYS A 186 ASN A 193 -1 O ILE A 189 N PHE A 200 SHEET 4 AE 5 TYR A 243 ASP A 248 1 O TYR A 243 N LEU A 188 SHEET 5 AE 5 ILE A 279 LEU A 282 1 O ILE A 280 N VAL A 246 SHEET 1 AF 4 LYS A 229 ILE A 231 0 SHEET 2 AF 4 LYS A 196 PHE A 200 -1 O ILE A 197 N ILE A 231 SHEET 3 AF 4 LYS A 186 ASN A 193 -1 O ILE A 189 N PHE A 200 SHEET 4 AF 4 ASN A 216 ALA A 217 1 O ASN A 216 N ALA A 187 LINK FE FE A1311 NE2 HIS A 227 1555 1555 2.21 LINK FE FE A1311 OH TYR A 288 1555 1555 1.89 LINK O25 LCM A1312 FE FE A1311 1555 1555 2.17 LINK O26 LCM A1312 FE FE A1311 1555 1555 2.29 LINK O24 LCM A1312 FE FE A1311 1555 1555 2.02 LINK O23 LCM A1312 FE FE A1311 1555 1555 1.87 CISPEP 1 GLU A 31 GLY A 32 0 -9.89 SITE 1 AC1 3 HIS A 227 TYR A 288 LCM A1312 SITE 1 AC2 12 LYS A 38 VAL A 97 GLN A 98 ARG A 118 SITE 2 AC2 12 LYS A 121 ARG A 205 THR A 226 HIS A 227 SITE 3 AC2 12 ARG A 249 LEU A 253 TYR A 288 FE A1311 CRYST1 60.420 66.890 67.300 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016551 0.000000 0.000000 0.00000 SCALE2 0.000000 0.014950 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014859 0.00000