data_3ZKK # _entry.id 3ZKK # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.397 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3ZKK pdb_00003zkk 10.2210/pdb3zkk/pdb PDBE EBI-55504 ? ? WWPDB D_1290055504 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2013-10-30 2 'Structure model' 1 1 2013-12-11 3 'Structure model' 1 2 2019-01-30 4 'Structure model' 1 3 2019-02-06 5 'Structure model' 2 0 2020-07-29 6 'Structure model' 2 1 2024-05-01 7 'Structure model' 2 2 2024-10-23 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 5 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Experimental preparation' 4 4 'Structure model' 'Data collection' 5 4 'Structure model' 'Experimental preparation' 6 5 'Structure model' 'Atomic model' 7 5 'Structure model' 'Data collection' 8 5 'Structure model' 'Derived calculations' 9 5 'Structure model' Other 10 5 'Structure model' 'Structure summary' 11 6 'Structure model' 'Data collection' 12 6 'Structure model' 'Database references' 13 6 'Structure model' 'Derived calculations' 14 6 'Structure model' 'Refinement description' 15 6 'Structure model' 'Structure summary' 16 7 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' exptl_crystal_grow 2 4 'Structure model' exptl_crystal_grow 3 5 'Structure model' atom_site 4 5 'Structure model' chem_comp 5 5 'Structure model' entity 6 5 'Structure model' pdbx_branch_scheme 7 5 'Structure model' pdbx_chem_comp_identifier 8 5 'Structure model' pdbx_database_status 9 5 'Structure model' pdbx_entity_branch 10 5 'Structure model' pdbx_entity_branch_descriptor 11 5 'Structure model' pdbx_entity_branch_link 12 5 'Structure model' pdbx_entity_branch_list 13 5 'Structure model' pdbx_entity_nonpoly 14 5 'Structure model' pdbx_nonpoly_scheme 15 5 'Structure model' pdbx_struct_assembly_gen 16 5 'Structure model' struct_asym 17 5 'Structure model' struct_conn 18 5 'Structure model' struct_site 19 5 'Structure model' struct_site_gen 20 6 'Structure model' chem_comp 21 6 'Structure model' chem_comp_atom 22 6 'Structure model' chem_comp_bond 23 6 'Structure model' database_2 24 6 'Structure model' pdbx_initial_refinement_model 25 6 'Structure model' struct_conn 26 7 'Structure model' pdbx_entry_details 27 7 'Structure model' pdbx_modification_feature # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_exptl_crystal_grow.method' 2 4 'Structure model' '_exptl_crystal_grow.temp' 3 5 'Structure model' '_atom_site.B_iso_or_equiv' 4 5 'Structure model' '_atom_site.Cartn_x' 5 5 'Structure model' '_atom_site.Cartn_y' 6 5 'Structure model' '_atom_site.Cartn_z' 7 5 'Structure model' '_atom_site.auth_asym_id' 8 5 'Structure model' '_atom_site.auth_atom_id' 9 5 'Structure model' '_atom_site.auth_comp_id' 10 5 'Structure model' '_atom_site.auth_seq_id' 11 5 'Structure model' '_atom_site.label_asym_id' 12 5 'Structure model' '_atom_site.label_atom_id' 13 5 'Structure model' '_atom_site.label_comp_id' 14 5 'Structure model' '_atom_site.label_entity_id' 15 5 'Structure model' '_atom_site.type_symbol' 16 5 'Structure model' '_chem_comp.name' 17 5 'Structure model' '_chem_comp.pdbx_synonyms' 18 5 'Structure model' '_chem_comp.type' 19 5 'Structure model' '_entity.formula_weight' 20 5 'Structure model' '_entity.pdbx_description' 21 5 'Structure model' '_entity.pdbx_number_of_molecules' 22 5 'Structure model' '_entity.src_method' 23 5 'Structure model' '_entity.type' 24 5 'Structure model' '_pdbx_database_status.status_code_sf' 25 5 'Structure model' '_pdbx_struct_assembly_gen.asym_id_list' 26 5 'Structure model' '_struct_conn.pdbx_dist_value' 27 5 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 28 5 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 29 5 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 30 5 'Structure model' '_struct_conn.ptnr1_label_asym_id' 31 5 'Structure model' '_struct_conn.ptnr1_label_atom_id' 32 5 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 33 5 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 34 5 'Structure model' '_struct_conn.ptnr2_label_asym_id' 35 5 'Structure model' '_struct_conn.ptnr2_label_atom_id' 36 6 'Structure model' '_chem_comp.pdbx_synonyms' 37 6 'Structure model' '_database_2.pdbx_DOI' 38 6 'Structure model' '_database_2.pdbx_database_accession' 39 6 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3ZKK _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 2013-01-23 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.content_type _pdbx_database_related.details PDB 3ZKL unspecified ;STRUCTURE OF THE XYLO-OLIGOSACCHARIDE SPECIFIC SOLUTE BINDING PROTEIN FROM BIFIDOBACTERIUM ANIMALIS SUBSP. LACTIS BL-04 IN COMPLEX WITH XYLOTRIOSE ; PDB 4C1T unspecified ;STRUCTURE OF THE XYLO-OLIGOSACCHARIDE SPECIFIC SOLUTE BINDING PROTEIN FROM BIFIDOBACTERIUM ANIMALIS SUBSP. LACTIS BL-04 IN COMPLEX WITH ARABINOXYLOTRIOSE ; PDB 4C1U unspecified ;STRUCTURE OF THE XYLO-OLIGOSACCHARIDE SPECIFIC SOLUTE BINDING PROTEIN FROM BIFIDOBACTERIUM ANIMALIS SUBSP. LACTIS BL-04 IN COMPLEX WITH ARABINOXYLOBIOSE ; # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Ejby, M.' 1 'Vujicic-Zagar, A.' 2 'Fredslund, F.' 3 'Svensson, B.' 4 'Slotboom, D.J.' 5 'Abou Hachem, M.' 6 # _citation.id primary _citation.title 'Structural Basis for Arabinoxylo-Oligosaccharide Capture by the Probiotic Bifidobacterium Animalis Subsp. Lactis Bl-04' _citation.journal_abbrev Mol.Microbiol. _citation.journal_volume 90 _citation.page_first 1100 _citation.page_last ? _citation.year 2013 _citation.journal_id_ASTM MOMIEE _citation.country UK _citation.journal_id_ISSN 0950-382X _citation.journal_id_CSD 2007 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 24279727 _citation.pdbx_database_id_DOI 10.1111/MMI.12419 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Ejby, M.' 1 ? primary 'Fredslund, F.' 2 ? primary 'Vujicic-Zagar, A.' 3 ? primary 'Svensson, B.' 4 ? primary 'Slotboom, D.J.' 5 ? primary 'Abou Hachem, M.' 6 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'XOS BINDING PROTEIN' 44332.543 1 ? ? 'RESIDUES 19-425' ? 2 branched man 'beta-D-xylopyranose-(1-4)-beta-D-xylopyranose-(1-4)-beta-D-xylopyranose-(1-4)-beta-D-xylopyranose' 546.474 1 ? ? ? ? 3 non-polymer syn 3,6,9,12,15,18-HEXAOXAICOSANE-1,20-DIOL 326.383 1 ? ? ? ? 4 water nat water 18.015 112 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GSHMASMSACGGSESSSDDKTITFWHNASAGEGRQYWENLAKSFEEANPGTKVEIQAIQNEDFAGKLQTAMQDPASGPDV FMSLGGAKTKEMIDAGQVMDLTDKISDTVKTDMKTTLSAATFDGKVYGVPVSVEPGGMWYSKDLFKKAGVSDVPATYEEL LADAKKLKDSGTDAIALGAKDAWPAAHWYYWLVLRECSPEVYDKSVQDHDFSNACWVNAGKKLQELKDLKVFNDGFLTTT AQQGANSSAGLLANHKAAMELMGAWEPGVLKDLTPDQKPMADLGFFAFPEVAGGEGEPGALMGGVTYFCVNPKASQTSID FVNYMGEKKNQEDYAKAFSTIPASEPARAVVTDESLKQVIEYLDKAPSMQLWMDTALGTNIGNALNAAVVNMLSGQGSPE DIVKAMQDAAQKG ; _entity_poly.pdbx_seq_one_letter_code_can ;GSHMASMSACGGSESSSDDKTITFWHNASAGEGRQYWENLAKSFEEANPGTKVEIQAIQNEDFAGKLQTAMQDPASGPDV FMSLGGAKTKEMIDAGQVMDLTDKISDTVKTDMKTTLSAATFDGKVYGVPVSVEPGGMWYSKDLFKKAGVSDVPATYEEL LADAKKLKDSGTDAIALGAKDAWPAAHWYYWLVLRECSPEVYDKSVQDHDFSNACWVNAGKKLQELKDLKVFNDGFLTTT AQQGANSSAGLLANHKAAMELMGAWEPGVLKDLTPDQKPMADLGFFAFPEVAGGEGEPGALMGGVTYFCVNPKASQTSID FVNYMGEKKNQEDYAKAFSTIPASEPARAVVTDESLKQVIEYLDKAPSMQLWMDTALGTNIGNALNAAVVNMLSGQGSPE DIVKAMQDAAQKG ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 3,6,9,12,15,18-HEXAOXAICOSANE-1,20-DIOL P33 4 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 HIS n 1 4 MET n 1 5 ALA n 1 6 SER n 1 7 MET n 1 8 SER n 1 9 ALA n 1 10 CYS n 1 11 GLY n 1 12 GLY n 1 13 SER n 1 14 GLU n 1 15 SER n 1 16 SER n 1 17 SER n 1 18 ASP n 1 19 ASP n 1 20 LYS n 1 21 THR n 1 22 ILE n 1 23 THR n 1 24 PHE n 1 25 TRP n 1 26 HIS n 1 27 ASN n 1 28 ALA n 1 29 SER n 1 30 ALA n 1 31 GLY n 1 32 GLU n 1 33 GLY n 1 34 ARG n 1 35 GLN n 1 36 TYR n 1 37 TRP n 1 38 GLU n 1 39 ASN n 1 40 LEU n 1 41 ALA n 1 42 LYS n 1 43 SER n 1 44 PHE n 1 45 GLU n 1 46 GLU n 1 47 ALA n 1 48 ASN n 1 49 PRO n 1 50 GLY n 1 51 THR n 1 52 LYS n 1 53 VAL n 1 54 GLU n 1 55 ILE n 1 56 GLN n 1 57 ALA n 1 58 ILE n 1 59 GLN n 1 60 ASN n 1 61 GLU n 1 62 ASP n 1 63 PHE n 1 64 ALA n 1 65 GLY n 1 66 LYS n 1 67 LEU n 1 68 GLN n 1 69 THR n 1 70 ALA n 1 71 MET n 1 72 GLN n 1 73 ASP n 1 74 PRO n 1 75 ALA n 1 76 SER n 1 77 GLY n 1 78 PRO n 1 79 ASP n 1 80 VAL n 1 81 PHE n 1 82 MET n 1 83 SER n 1 84 LEU n 1 85 GLY n 1 86 GLY n 1 87 ALA n 1 88 LYS n 1 89 THR n 1 90 LYS n 1 91 GLU n 1 92 MET n 1 93 ILE n 1 94 ASP n 1 95 ALA n 1 96 GLY n 1 97 GLN n 1 98 VAL n 1 99 MET n 1 100 ASP n 1 101 LEU n 1 102 THR n 1 103 ASP n 1 104 LYS n 1 105 ILE n 1 106 SER n 1 107 ASP n 1 108 THR n 1 109 VAL n 1 110 LYS n 1 111 THR n 1 112 ASP n 1 113 MET n 1 114 LYS n 1 115 THR n 1 116 THR n 1 117 LEU n 1 118 SER n 1 119 ALA n 1 120 ALA n 1 121 THR n 1 122 PHE n 1 123 ASP n 1 124 GLY n 1 125 LYS n 1 126 VAL n 1 127 TYR n 1 128 GLY n 1 129 VAL n 1 130 PRO n 1 131 VAL n 1 132 SER n 1 133 VAL n 1 134 GLU n 1 135 PRO n 1 136 GLY n 1 137 GLY n 1 138 MET n 1 139 TRP n 1 140 TYR n 1 141 SER n 1 142 LYS n 1 143 ASP n 1 144 LEU n 1 145 PHE n 1 146 LYS n 1 147 LYS n 1 148 ALA n 1 149 GLY n 1 150 VAL n 1 151 SER n 1 152 ASP n 1 153 VAL n 1 154 PRO n 1 155 ALA n 1 156 THR n 1 157 TYR n 1 158 GLU n 1 159 GLU n 1 160 LEU n 1 161 LEU n 1 162 ALA n 1 163 ASP n 1 164 ALA n 1 165 LYS n 1 166 LYS n 1 167 LEU n 1 168 LYS n 1 169 ASP n 1 170 SER n 1 171 GLY n 1 172 THR n 1 173 ASP n 1 174 ALA n 1 175 ILE n 1 176 ALA n 1 177 LEU n 1 178 GLY n 1 179 ALA n 1 180 LYS n 1 181 ASP n 1 182 ALA n 1 183 TRP n 1 184 PRO n 1 185 ALA n 1 186 ALA n 1 187 HIS n 1 188 TRP n 1 189 TYR n 1 190 TYR n 1 191 TRP n 1 192 LEU n 1 193 VAL n 1 194 LEU n 1 195 ARG n 1 196 GLU n 1 197 CYS n 1 198 SER n 1 199 PRO n 1 200 GLU n 1 201 VAL n 1 202 TYR n 1 203 ASP n 1 204 LYS n 1 205 SER n 1 206 VAL n 1 207 GLN n 1 208 ASP n 1 209 HIS n 1 210 ASP n 1 211 PHE n 1 212 SER n 1 213 ASN n 1 214 ALA n 1 215 CYS n 1 216 TRP n 1 217 VAL n 1 218 ASN n 1 219 ALA n 1 220 GLY n 1 221 LYS n 1 222 LYS n 1 223 LEU n 1 224 GLN n 1 225 GLU n 1 226 LEU n 1 227 LYS n 1 228 ASP n 1 229 LEU n 1 230 LYS n 1 231 VAL n 1 232 PHE n 1 233 ASN n 1 234 ASP n 1 235 GLY n 1 236 PHE n 1 237 LEU n 1 238 THR n 1 239 THR n 1 240 THR n 1 241 ALA n 1 242 GLN n 1 243 GLN n 1 244 GLY n 1 245 ALA n 1 246 ASN n 1 247 SER n 1 248 SER n 1 249 ALA n 1 250 GLY n 1 251 LEU n 1 252 LEU n 1 253 ALA n 1 254 ASN n 1 255 HIS n 1 256 LYS n 1 257 ALA n 1 258 ALA n 1 259 MET n 1 260 GLU n 1 261 LEU n 1 262 MET n 1 263 GLY n 1 264 ALA n 1 265 TRP n 1 266 GLU n 1 267 PRO n 1 268 GLY n 1 269 VAL n 1 270 LEU n 1 271 LYS n 1 272 ASP n 1 273 LEU n 1 274 THR n 1 275 PRO n 1 276 ASP n 1 277 GLN n 1 278 LYS n 1 279 PRO n 1 280 MET n 1 281 ALA n 1 282 ASP n 1 283 LEU n 1 284 GLY n 1 285 PHE n 1 286 PHE n 1 287 ALA n 1 288 PHE n 1 289 PRO n 1 290 GLU n 1 291 VAL n 1 292 ALA n 1 293 GLY n 1 294 GLY n 1 295 GLU n 1 296 GLY n 1 297 GLU n 1 298 PRO n 1 299 GLY n 1 300 ALA n 1 301 LEU n 1 302 MET n 1 303 GLY n 1 304 GLY n 1 305 VAL n 1 306 THR n 1 307 TYR n 1 308 PHE n 1 309 CYS n 1 310 VAL n 1 311 ASN n 1 312 PRO n 1 313 LYS n 1 314 ALA n 1 315 SER n 1 316 GLN n 1 317 THR n 1 318 SER n 1 319 ILE n 1 320 ASP n 1 321 PHE n 1 322 VAL n 1 323 ASN n 1 324 TYR n 1 325 MET n 1 326 GLY n 1 327 GLU n 1 328 LYS n 1 329 LYS n 1 330 ASN n 1 331 GLN n 1 332 GLU n 1 333 ASP n 1 334 TYR n 1 335 ALA n 1 336 LYS n 1 337 ALA n 1 338 PHE n 1 339 SER n 1 340 THR n 1 341 ILE n 1 342 PRO n 1 343 ALA n 1 344 SER n 1 345 GLU n 1 346 PRO n 1 347 ALA n 1 348 ARG n 1 349 ALA n 1 350 VAL n 1 351 VAL n 1 352 THR n 1 353 ASP n 1 354 GLU n 1 355 SER n 1 356 LEU n 1 357 LYS n 1 358 GLN n 1 359 VAL n 1 360 ILE n 1 361 GLU n 1 362 TYR n 1 363 LEU n 1 364 ASP n 1 365 LYS n 1 366 ALA n 1 367 PRO n 1 368 SER n 1 369 MET n 1 370 GLN n 1 371 LEU n 1 372 TRP n 1 373 MET n 1 374 ASP n 1 375 THR n 1 376 ALA n 1 377 LEU n 1 378 GLY n 1 379 THR n 1 380 ASN n 1 381 ILE n 1 382 GLY n 1 383 ASN n 1 384 ALA n 1 385 LEU n 1 386 ASN n 1 387 ALA n 1 388 ALA n 1 389 VAL n 1 390 VAL n 1 391 ASN n 1 392 MET n 1 393 LEU n 1 394 SER n 1 395 GLY n 1 396 GLN n 1 397 GLY n 1 398 SER n 1 399 PRO n 1 400 GLU n 1 401 ASP n 1 402 ILE n 1 403 VAL n 1 404 LYS n 1 405 ALA n 1 406 MET n 1 407 GLN n 1 408 ASP n 1 409 ALA n 1 410 ALA n 1 411 GLN n 1 412 LYS n 1 413 GLY n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'BIFIDOBACTERIUM ANIMALIS SUBSP. LACTIS BL-04' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 580050 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'ESCHERICHIA COLI' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector PET28A _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _pdbx_entity_branch.entity_id 2 _pdbx_entity_branch.type oligosaccharide # loop_ _pdbx_entity_branch_descriptor.ordinal _pdbx_entity_branch_descriptor.entity_id _pdbx_entity_branch_descriptor.descriptor _pdbx_entity_branch_descriptor.type _pdbx_entity_branch_descriptor.program _pdbx_entity_branch_descriptor.program_version 1 2 DXylpb1-4DXylpb1-4DXylpb1-4DXylpb1-ROH 'Glycam Condensed Sequence' GMML 1.0 2 2 'WURCS=2.0/1,4,3/[a212h-1b_1-5]/1-1-1-1/a4-b1_b4-c1_c4-d1' WURCS PDB2Glycan 1.1.0 3 2 '[][b-D-Xylp]{[(4+1)][b-D-Xylp]{[(4+1)][b-D-Xylp]{[(4+1)][b-D-Xylp]{}}}}' LINUCS PDB-CARE ? # loop_ _pdbx_entity_branch_link.link_id _pdbx_entity_branch_link.entity_id _pdbx_entity_branch_link.entity_branch_list_num_1 _pdbx_entity_branch_link.comp_id_1 _pdbx_entity_branch_link.atom_id_1 _pdbx_entity_branch_link.leaving_atom_id_1 _pdbx_entity_branch_link.entity_branch_list_num_2 _pdbx_entity_branch_link.comp_id_2 _pdbx_entity_branch_link.atom_id_2 _pdbx_entity_branch_link.leaving_atom_id_2 _pdbx_entity_branch_link.value_order _pdbx_entity_branch_link.details 1 2 2 XYP C1 O1 1 XYP O4 HO4 sing ? 2 2 3 XYP C1 O1 2 XYP O4 HO4 sing ? 3 2 4 XYP C1 O1 3 XYP O4 HO4 sing ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 P33 non-polymer . 3,6,9,12,15,18-HEXAOXAICOSANE-1,20-DIOL 'HEPTAETHYLENE GLYCOL; PEG330' 'C14 H30 O8' 326.383 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 XYP 'D-saccharide, beta linking' . beta-D-xylopyranose 'beta-D-xylose; D-xylose; xylose' 'C5 H10 O5' 150.130 # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier XYP 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DXylpb XYP 'COMMON NAME' GMML 1.0 b-D-xylopyranose XYP 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-Xylp XYP 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Xyl # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 13 ? ? ? A . n A 1 2 SER 2 14 ? ? ? A . n A 1 3 HIS 3 15 ? ? ? A . n A 1 4 MET 4 16 ? ? ? A . n A 1 5 ALA 5 17 ? ? ? A . n A 1 6 SER 6 18 ? ? ? A . n A 1 7 MET 7 19 ? ? ? A . n A 1 8 SER 8 20 ? ? ? A . n A 1 9 ALA 9 21 ? ? ? A . n A 1 10 CYS 10 22 ? ? ? A . n A 1 11 GLY 11 23 ? ? ? A . n A 1 12 GLY 12 24 ? ? ? A . n A 1 13 SER 13 25 ? ? ? A . n A 1 14 GLU 14 26 ? ? ? A . n A 1 15 SER 15 27 ? ? ? A . n A 1 16 SER 16 28 ? ? ? A . n A 1 17 SER 17 29 ? ? ? A . n A 1 18 ASP 18 30 30 ASP ASP A . n A 1 19 ASP 19 31 31 ASP ASP A . n A 1 20 LYS 20 32 32 LYS LYS A . n A 1 21 THR 21 33 33 THR THR A . n A 1 22 ILE 22 34 34 ILE ILE A . n A 1 23 THR 23 35 35 THR THR A . n A 1 24 PHE 24 36 36 PHE PHE A . n A 1 25 TRP 25 37 37 TRP TRP A . n A 1 26 HIS 26 38 38 HIS HIS A . n A 1 27 ASN 27 39 39 ASN ASN A . n A 1 28 ALA 28 40 40 ALA ALA A . n A 1 29 SER 29 41 41 SER SER A . n A 1 30 ALA 30 42 42 ALA ALA A . n A 1 31 GLY 31 43 43 GLY GLY A . n A 1 32 GLU 32 44 44 GLU GLU A . n A 1 33 GLY 33 45 45 GLY GLY A . n A 1 34 ARG 34 46 46 ARG ARG A . n A 1 35 GLN 35 47 47 GLN GLN A . n A 1 36 TYR 36 48 48 TYR TYR A . n A 1 37 TRP 37 49 49 TRP TRP A . n A 1 38 GLU 38 50 50 GLU GLU A . n A 1 39 ASN 39 51 51 ASN ASN A . n A 1 40 LEU 40 52 52 LEU LEU A . n A 1 41 ALA 41 53 53 ALA ALA A . n A 1 42 LYS 42 54 54 LYS LYS A . n A 1 43 SER 43 55 55 SER SER A . n A 1 44 PHE 44 56 56 PHE PHE A . n A 1 45 GLU 45 57 57 GLU GLU A . n A 1 46 GLU 46 58 58 GLU GLU A . n A 1 47 ALA 47 59 59 ALA ALA A . n A 1 48 ASN 48 60 60 ASN ASN A . n A 1 49 PRO 49 61 61 PRO PRO A . n A 1 50 GLY 50 62 62 GLY GLY A . n A 1 51 THR 51 63 63 THR THR A . n A 1 52 LYS 52 64 64 LYS LYS A . n A 1 53 VAL 53 65 65 VAL VAL A . n A 1 54 GLU 54 66 66 GLU GLU A . n A 1 55 ILE 55 67 67 ILE ILE A . n A 1 56 GLN 56 68 68 GLN GLN A . n A 1 57 ALA 57 69 69 ALA ALA A . n A 1 58 ILE 58 70 70 ILE ILE A . n A 1 59 GLN 59 71 71 GLN GLN A . n A 1 60 ASN 60 72 72 ASN ASN A . n A 1 61 GLU 61 73 73 GLU GLU A . n A 1 62 ASP 62 74 74 ASP ASP A . n A 1 63 PHE 63 75 75 PHE PHE A . n A 1 64 ALA 64 76 76 ALA ALA A . n A 1 65 GLY 65 77 77 GLY GLY A . n A 1 66 LYS 66 78 78 LYS LYS A . n A 1 67 LEU 67 79 79 LEU LEU A . n A 1 68 GLN 68 80 80 GLN GLN A . n A 1 69 THR 69 81 81 THR THR A . n A 1 70 ALA 70 82 82 ALA ALA A . n A 1 71 MET 71 83 83 MET MET A . n A 1 72 GLN 72 84 84 GLN GLN A . n A 1 73 ASP 73 85 85 ASP ASP A . n A 1 74 PRO 74 86 86 PRO PRO A . n A 1 75 ALA 75 87 87 ALA ALA A . n A 1 76 SER 76 88 88 SER SER A . n A 1 77 GLY 77 89 89 GLY GLY A . n A 1 78 PRO 78 90 90 PRO PRO A . n A 1 79 ASP 79 91 91 ASP ASP A . n A 1 80 VAL 80 92 92 VAL VAL A . n A 1 81 PHE 81 93 93 PHE PHE A . n A 1 82 MET 82 94 94 MET MET A . n A 1 83 SER 83 95 95 SER SER A . n A 1 84 LEU 84 96 96 LEU LEU A . n A 1 85 GLY 85 97 97 GLY GLY A . n A 1 86 GLY 86 98 98 GLY GLY A . n A 1 87 ALA 87 99 99 ALA ALA A . n A 1 88 LYS 88 100 100 LYS LYS A . n A 1 89 THR 89 101 101 THR THR A . n A 1 90 LYS 90 102 102 LYS LYS A . n A 1 91 GLU 91 103 103 GLU GLU A . n A 1 92 MET 92 104 104 MET MET A . n A 1 93 ILE 93 105 105 ILE ILE A . n A 1 94 ASP 94 106 106 ASP ASP A . n A 1 95 ALA 95 107 107 ALA ALA A . n A 1 96 GLY 96 108 108 GLY GLY A . n A 1 97 GLN 97 109 109 GLN GLN A . n A 1 98 VAL 98 110 110 VAL VAL A . n A 1 99 MET 99 111 111 MET MET A . n A 1 100 ASP 100 112 112 ASP ASP A . n A 1 101 LEU 101 113 113 LEU LEU A . n A 1 102 THR 102 114 114 THR THR A . n A 1 103 ASP 103 115 115 ASP ASP A . n A 1 104 LYS 104 116 116 LYS LYS A . n A 1 105 ILE 105 117 117 ILE ILE A . n A 1 106 SER 106 118 118 SER SER A . n A 1 107 ASP 107 119 119 ASP ASP A . n A 1 108 THR 108 120 120 THR THR A . n A 1 109 VAL 109 121 121 VAL VAL A . n A 1 110 LYS 110 122 122 LYS LYS A . n A 1 111 THR 111 123 123 THR THR A . n A 1 112 ASP 112 124 124 ASP ASP A . n A 1 113 MET 113 125 125 MET MET A . n A 1 114 LYS 114 126 126 LYS LYS A . n A 1 115 THR 115 127 127 THR THR A . n A 1 116 THR 116 128 128 THR THR A . n A 1 117 LEU 117 129 129 LEU LEU A . n A 1 118 SER 118 130 130 SER SER A . n A 1 119 ALA 119 131 131 ALA ALA A . n A 1 120 ALA 120 132 132 ALA ALA A . n A 1 121 THR 121 133 133 THR THR A . n A 1 122 PHE 122 134 134 PHE PHE A . n A 1 123 ASP 123 135 135 ASP ASP A . n A 1 124 GLY 124 136 136 GLY GLY A . n A 1 125 LYS 125 137 137 LYS LYS A . n A 1 126 VAL 126 138 138 VAL VAL A . n A 1 127 TYR 127 139 139 TYR TYR A . n A 1 128 GLY 128 140 140 GLY GLY A . n A 1 129 VAL 129 141 141 VAL VAL A . n A 1 130 PRO 130 142 142 PRO PRO A . n A 1 131 VAL 131 143 143 VAL VAL A . n A 1 132 SER 132 144 144 SER SER A . n A 1 133 VAL 133 145 145 VAL VAL A . n A 1 134 GLU 134 146 146 GLU GLU A . n A 1 135 PRO 135 147 147 PRO PRO A . n A 1 136 GLY 136 148 148 GLY GLY A . n A 1 137 GLY 137 149 149 GLY GLY A . n A 1 138 MET 138 150 150 MET MET A . n A 1 139 TRP 139 151 151 TRP TRP A . n A 1 140 TYR 140 152 152 TYR TYR A . n A 1 141 SER 141 153 153 SER SER A . n A 1 142 LYS 142 154 154 LYS LYS A . n A 1 143 ASP 143 155 155 ASP ASP A . n A 1 144 LEU 144 156 156 LEU LEU A . n A 1 145 PHE 145 157 157 PHE PHE A . n A 1 146 LYS 146 158 158 LYS LYS A . n A 1 147 LYS 147 159 159 LYS LYS A . n A 1 148 ALA 148 160 160 ALA ALA A . n A 1 149 GLY 149 161 161 GLY GLY A . n A 1 150 VAL 150 162 162 VAL VAL A . n A 1 151 SER 151 163 163 SER SER A . n A 1 152 ASP 152 164 164 ASP ASP A . n A 1 153 VAL 153 165 165 VAL VAL A . n A 1 154 PRO 154 166 166 PRO PRO A . n A 1 155 ALA 155 167 167 ALA ALA A . n A 1 156 THR 156 168 168 THR THR A . n A 1 157 TYR 157 169 169 TYR TYR A . n A 1 158 GLU 158 170 170 GLU GLU A . n A 1 159 GLU 159 171 171 GLU GLU A . n A 1 160 LEU 160 172 172 LEU LEU A . n A 1 161 LEU 161 173 173 LEU LEU A . n A 1 162 ALA 162 174 174 ALA ALA A . n A 1 163 ASP 163 175 175 ASP ASP A . n A 1 164 ALA 164 176 176 ALA ALA A . n A 1 165 LYS 165 177 177 LYS LYS A . n A 1 166 LYS 166 178 178 LYS LYS A . n A 1 167 LEU 167 179 179 LEU LEU A . n A 1 168 LYS 168 180 180 LYS LYS A . n A 1 169 ASP 169 181 181 ASP ASP A . n A 1 170 SER 170 182 182 SER SER A . n A 1 171 GLY 171 183 183 GLY GLY A . n A 1 172 THR 172 184 184 THR THR A . n A 1 173 ASP 173 185 185 ASP ASP A . n A 1 174 ALA 174 186 186 ALA ALA A . n A 1 175 ILE 175 187 187 ILE ILE A . n A 1 176 ALA 176 188 188 ALA ALA A . n A 1 177 LEU 177 189 189 LEU LEU A . n A 1 178 GLY 178 190 190 GLY GLY A . n A 1 179 ALA 179 191 191 ALA ALA A . n A 1 180 LYS 180 192 192 LYS LYS A . n A 1 181 ASP 181 193 193 ASP ASP A . n A 1 182 ALA 182 194 194 ALA ALA A . n A 1 183 TRP 183 195 195 TRP TRP A . n A 1 184 PRO 184 196 196 PRO PRO A . n A 1 185 ALA 185 197 197 ALA ALA A . n A 1 186 ALA 186 198 198 ALA ALA A . n A 1 187 HIS 187 199 199 HIS HIS A . n A 1 188 TRP 188 200 200 TRP TRP A . n A 1 189 TYR 189 201 201 TYR TYR A . n A 1 190 TYR 190 202 202 TYR TYR A . n A 1 191 TRP 191 203 203 TRP TRP A . n A 1 192 LEU 192 204 204 LEU LEU A . n A 1 193 VAL 193 205 205 VAL VAL A . n A 1 194 LEU 194 206 206 LEU LEU A . n A 1 195 ARG 195 207 207 ARG ARG A . n A 1 196 GLU 196 208 208 GLU GLU A . n A 1 197 CYS 197 209 209 CYS CYS A . n A 1 198 SER 198 210 210 SER SER A . n A 1 199 PRO 199 211 211 PRO PRO A . n A 1 200 GLU 200 212 212 GLU GLU A . n A 1 201 VAL 201 213 213 VAL VAL A . n A 1 202 TYR 202 214 214 TYR TYR A . n A 1 203 ASP 203 215 215 ASP ASP A . n A 1 204 LYS 204 216 216 LYS LYS A . n A 1 205 SER 205 217 217 SER SER A . n A 1 206 VAL 206 218 218 VAL VAL A . n A 1 207 GLN 207 219 219 GLN GLN A . n A 1 208 ASP 208 220 220 ASP ASP A . n A 1 209 HIS 209 221 221 HIS HIS A . n A 1 210 ASP 210 222 222 ASP ASP A . n A 1 211 PHE 211 223 223 PHE PHE A . n A 1 212 SER 212 224 224 SER SER A . n A 1 213 ASN 213 225 225 ASN ASN A . n A 1 214 ALA 214 226 226 ALA ALA A . n A 1 215 CYS 215 227 227 CYS CYS A . n A 1 216 TRP 216 228 228 TRP TRP A . n A 1 217 VAL 217 229 229 VAL VAL A . n A 1 218 ASN 218 230 230 ASN ASN A . n A 1 219 ALA 219 231 231 ALA ALA A . n A 1 220 GLY 220 232 232 GLY GLY A . n A 1 221 LYS 221 233 233 LYS LYS A . n A 1 222 LYS 222 234 234 LYS LYS A . n A 1 223 LEU 223 235 235 LEU LEU A . n A 1 224 GLN 224 236 236 GLN GLN A . n A 1 225 GLU 225 237 237 GLU GLU A . n A 1 226 LEU 226 238 238 LEU LEU A . n A 1 227 LYS 227 239 239 LYS LYS A . n A 1 228 ASP 228 240 240 ASP ASP A . n A 1 229 LEU 229 241 241 LEU LEU A . n A 1 230 LYS 230 242 242 LYS LYS A . n A 1 231 VAL 231 243 243 VAL VAL A . n A 1 232 PHE 232 244 244 PHE PHE A . n A 1 233 ASN 233 245 245 ASN ASN A . n A 1 234 ASP 234 246 246 ASP ASP A . n A 1 235 GLY 235 247 247 GLY GLY A . n A 1 236 PHE 236 248 248 PHE PHE A . n A 1 237 LEU 237 249 249 LEU LEU A . n A 1 238 THR 238 250 250 THR THR A . n A 1 239 THR 239 251 251 THR THR A . n A 1 240 THR 240 252 252 THR THR A . n A 1 241 ALA 241 253 253 ALA ALA A . n A 1 242 GLN 242 254 254 GLN GLN A . n A 1 243 GLN 243 255 255 GLN GLN A . n A 1 244 GLY 244 256 256 GLY GLY A . n A 1 245 ALA 245 257 257 ALA ALA A . n A 1 246 ASN 246 258 258 ASN ASN A . n A 1 247 SER 247 259 259 SER SER A . n A 1 248 SER 248 260 260 SER SER A . n A 1 249 ALA 249 261 261 ALA ALA A . n A 1 250 GLY 250 262 262 GLY GLY A . n A 1 251 LEU 251 263 263 LEU LEU A . n A 1 252 LEU 252 264 264 LEU LEU A . n A 1 253 ALA 253 265 265 ALA ALA A . n A 1 254 ASN 254 266 266 ASN ASN A . n A 1 255 HIS 255 267 267 HIS HIS A . n A 1 256 LYS 256 268 268 LYS LYS A . n A 1 257 ALA 257 269 269 ALA ALA A . n A 1 258 ALA 258 270 270 ALA ALA A . n A 1 259 MET 259 271 271 MET MET A . n A 1 260 GLU 260 272 272 GLU GLU A . n A 1 261 LEU 261 273 273 LEU LEU A . n A 1 262 MET 262 274 274 MET MET A . n A 1 263 GLY 263 275 275 GLY GLY A . n A 1 264 ALA 264 276 276 ALA ALA A . n A 1 265 TRP 265 277 277 TRP TRP A . n A 1 266 GLU 266 278 278 GLU GLU A . n A 1 267 PRO 267 279 279 PRO PRO A . n A 1 268 GLY 268 280 280 GLY GLY A . n A 1 269 VAL 269 281 281 VAL VAL A . n A 1 270 LEU 270 282 282 LEU LEU A . n A 1 271 LYS 271 283 283 LYS LYS A . n A 1 272 ASP 272 284 284 ASP ASP A . n A 1 273 LEU 273 285 285 LEU LEU A . n A 1 274 THR 274 286 286 THR THR A . n A 1 275 PRO 275 287 287 PRO PRO A . n A 1 276 ASP 276 288 288 ASP ASP A . n A 1 277 GLN 277 289 289 GLN GLN A . n A 1 278 LYS 278 290 290 LYS LYS A . n A 1 279 PRO 279 291 291 PRO PRO A . n A 1 280 MET 280 292 292 MET MET A . n A 1 281 ALA 281 293 293 ALA ALA A . n A 1 282 ASP 282 294 294 ASP ASP A . n A 1 283 LEU 283 295 295 LEU LEU A . n A 1 284 GLY 284 296 296 GLY GLY A . n A 1 285 PHE 285 297 297 PHE PHE A . n A 1 286 PHE 286 298 298 PHE PHE A . n A 1 287 ALA 287 299 299 ALA ALA A . n A 1 288 PHE 288 300 300 PHE PHE A . n A 1 289 PRO 289 301 301 PRO PRO A . n A 1 290 GLU 290 302 302 GLU GLU A . n A 1 291 VAL 291 303 303 VAL VAL A . n A 1 292 ALA 292 304 304 ALA ALA A . n A 1 293 GLY 293 305 305 GLY GLY A . n A 1 294 GLY 294 306 306 GLY GLY A . n A 1 295 GLU 295 307 307 GLU GLU A . n A 1 296 GLY 296 308 308 GLY GLY A . n A 1 297 GLU 297 309 309 GLU GLU A . n A 1 298 PRO 298 310 310 PRO PRO A . n A 1 299 GLY 299 311 311 GLY GLY A . n A 1 300 ALA 300 312 312 ALA ALA A . n A 1 301 LEU 301 313 313 LEU LEU A . n A 1 302 MET 302 314 314 MET MET A . n A 1 303 GLY 303 315 315 GLY GLY A . n A 1 304 GLY 304 316 316 GLY GLY A . n A 1 305 VAL 305 317 317 VAL VAL A . n A 1 306 THR 306 318 318 THR THR A . n A 1 307 TYR 307 319 319 TYR TYR A . n A 1 308 PHE 308 320 320 PHE PHE A . n A 1 309 CYS 309 321 321 CYS CYS A . n A 1 310 VAL 310 322 322 VAL VAL A . n A 1 311 ASN 311 323 323 ASN ASN A . n A 1 312 PRO 312 324 324 PRO PRO A . n A 1 313 LYS 313 325 325 LYS LYS A . n A 1 314 ALA 314 326 326 ALA ALA A . n A 1 315 SER 315 327 327 SER SER A . n A 1 316 GLN 316 328 328 GLN GLN A . n A 1 317 THR 317 329 329 THR THR A . n A 1 318 SER 318 330 330 SER SER A . n A 1 319 ILE 319 331 331 ILE ILE A . n A 1 320 ASP 320 332 332 ASP ASP A . n A 1 321 PHE 321 333 333 PHE PHE A . n A 1 322 VAL 322 334 334 VAL VAL A . n A 1 323 ASN 323 335 335 ASN ASN A . n A 1 324 TYR 324 336 336 TYR TYR A . n A 1 325 MET 325 337 337 MET MET A . n A 1 326 GLY 326 338 338 GLY GLY A . n A 1 327 GLU 327 339 339 GLU GLU A . n A 1 328 LYS 328 340 340 LYS LYS A . n A 1 329 LYS 329 341 341 LYS LYS A . n A 1 330 ASN 330 342 342 ASN ASN A . n A 1 331 GLN 331 343 343 GLN GLN A . n A 1 332 GLU 332 344 344 GLU GLU A . n A 1 333 ASP 333 345 345 ASP ASP A . n A 1 334 TYR 334 346 346 TYR TYR A . n A 1 335 ALA 335 347 347 ALA ALA A . n A 1 336 LYS 336 348 348 LYS LYS A . n A 1 337 ALA 337 349 349 ALA ALA A . n A 1 338 PHE 338 350 350 PHE PHE A . n A 1 339 SER 339 351 351 SER SER A . n A 1 340 THR 340 352 352 THR THR A . n A 1 341 ILE 341 353 353 ILE ILE A . n A 1 342 PRO 342 354 354 PRO PRO A . n A 1 343 ALA 343 355 355 ALA ALA A . n A 1 344 SER 344 356 356 SER SER A . n A 1 345 GLU 345 357 357 GLU GLU A . n A 1 346 PRO 346 358 358 PRO PRO A . n A 1 347 ALA 347 359 359 ALA ALA A . n A 1 348 ARG 348 360 360 ARG ARG A . n A 1 349 ALA 349 361 361 ALA ALA A . n A 1 350 VAL 350 362 362 VAL VAL A . n A 1 351 VAL 351 363 363 VAL VAL A . n A 1 352 THR 352 364 364 THR THR A . n A 1 353 ASP 353 365 365 ASP ASP A . n A 1 354 GLU 354 366 366 GLU GLU A . n A 1 355 SER 355 367 367 SER SER A . n A 1 356 LEU 356 368 368 LEU LEU A . n A 1 357 LYS 357 369 369 LYS LYS A . n A 1 358 GLN 358 370 370 GLN GLN A . n A 1 359 VAL 359 371 371 VAL VAL A . n A 1 360 ILE 360 372 372 ILE ILE A . n A 1 361 GLU 361 373 373 GLU GLU A . n A 1 362 TYR 362 374 374 TYR TYR A . n A 1 363 LEU 363 375 375 LEU LEU A . n A 1 364 ASP 364 376 376 ASP ASP A . n A 1 365 LYS 365 377 377 LYS LYS A . n A 1 366 ALA 366 378 378 ALA ALA A . n A 1 367 PRO 367 379 379 PRO PRO A . n A 1 368 SER 368 380 380 SER SER A . n A 1 369 MET 369 381 381 MET MET A . n A 1 370 GLN 370 382 382 GLN GLN A . n A 1 371 LEU 371 383 383 LEU LEU A . n A 1 372 TRP 372 384 384 TRP TRP A . n A 1 373 MET 373 385 385 MET MET A . n A 1 374 ASP 374 386 386 ASP ASP A . n A 1 375 THR 375 387 387 THR THR A . n A 1 376 ALA 376 388 388 ALA ALA A . n A 1 377 LEU 377 389 389 LEU LEU A . n A 1 378 GLY 378 390 390 GLY GLY A . n A 1 379 THR 379 391 391 THR THR A . n A 1 380 ASN 380 392 392 ASN ASN A . n A 1 381 ILE 381 393 393 ILE ILE A . n A 1 382 GLY 382 394 394 GLY GLY A . n A 1 383 ASN 383 395 395 ASN ASN A . n A 1 384 ALA 384 396 396 ALA ALA A . n A 1 385 LEU 385 397 397 LEU LEU A . n A 1 386 ASN 386 398 398 ASN ASN A . n A 1 387 ALA 387 399 399 ALA ALA A . n A 1 388 ALA 388 400 400 ALA ALA A . n A 1 389 VAL 389 401 401 VAL VAL A . n A 1 390 VAL 390 402 402 VAL VAL A . n A 1 391 ASN 391 403 403 ASN ASN A . n A 1 392 MET 392 404 404 MET MET A . n A 1 393 LEU 393 405 405 LEU LEU A . n A 1 394 SER 394 406 406 SER SER A . n A 1 395 GLY 395 407 407 GLY GLY A . n A 1 396 GLN 396 408 408 GLN GLN A . n A 1 397 GLY 397 409 409 GLY GLY A . n A 1 398 SER 398 410 410 SER SER A . n A 1 399 PRO 399 411 411 PRO PRO A . n A 1 400 GLU 400 412 412 GLU GLU A . n A 1 401 ASP 401 413 413 ASP ASP A . n A 1 402 ILE 402 414 414 ILE ILE A . n A 1 403 VAL 403 415 415 VAL VAL A . n A 1 404 LYS 404 416 416 LYS LYS A . n A 1 405 ALA 405 417 417 ALA ALA A . n A 1 406 MET 406 418 418 MET MET A . n A 1 407 GLN 407 419 419 GLN GLN A . n A 1 408 ASP 408 420 420 ASP ASP A . n A 1 409 ALA 409 421 421 ALA ALA A . n A 1 410 ALA 410 422 422 ALA ALA A . n A 1 411 GLN 411 423 423 GLN GLN A . n A 1 412 LYS 412 424 424 LYS LYS A . n A 1 413 GLY 413 425 425 GLY GLY A . n # loop_ _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_mon_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.hetero B 2 XYP 1 B XYP 1 A XYP 1430 n B 2 XYP 2 B XYP 2 A XYP 1429 n B 2 XYP 3 B XYP 3 A XYP 1428 n B 2 XYP 4 B XYP 4 A XYP 1427 n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 P33 1 1426 1426 P33 P33 A . D 4 HOH 1 2001 2001 HOH HOH A . D 4 HOH 2 2002 2002 HOH HOH A . D 4 HOH 3 2003 2003 HOH HOH A . D 4 HOH 4 2004 2004 HOH HOH A . D 4 HOH 5 2005 2005 HOH HOH A . D 4 HOH 6 2006 2006 HOH HOH A . D 4 HOH 7 2007 2007 HOH HOH A . D 4 HOH 8 2008 2008 HOH HOH A . D 4 HOH 9 2009 2009 HOH HOH A . D 4 HOH 10 2010 2010 HOH HOH A . D 4 HOH 11 2011 2011 HOH HOH A . D 4 HOH 12 2012 2012 HOH HOH A . D 4 HOH 13 2013 2013 HOH HOH A . D 4 HOH 14 2014 2014 HOH HOH A . D 4 HOH 15 2015 2015 HOH HOH A . D 4 HOH 16 2016 2016 HOH HOH A . D 4 HOH 17 2017 2017 HOH HOH A . D 4 HOH 18 2018 2018 HOH HOH A . D 4 HOH 19 2019 2019 HOH HOH A . D 4 HOH 20 2020 2020 HOH HOH A . D 4 HOH 21 2021 2021 HOH HOH A . D 4 HOH 22 2022 2022 HOH HOH A . D 4 HOH 23 2023 2023 HOH HOH A . D 4 HOH 24 2024 2024 HOH HOH A . D 4 HOH 25 2025 2025 HOH HOH A . D 4 HOH 26 2026 2026 HOH HOH A . D 4 HOH 27 2027 2027 HOH HOH A . D 4 HOH 28 2028 2028 HOH HOH A . D 4 HOH 29 2029 2029 HOH HOH A . D 4 HOH 30 2030 2030 HOH HOH A . D 4 HOH 31 2031 2031 HOH HOH A . D 4 HOH 32 2032 2032 HOH HOH A . D 4 HOH 33 2033 2033 HOH HOH A . D 4 HOH 34 2034 2034 HOH HOH A . D 4 HOH 35 2035 2035 HOH HOH A . D 4 HOH 36 2036 2036 HOH HOH A . D 4 HOH 37 2037 2037 HOH HOH A . D 4 HOH 38 2038 2038 HOH HOH A . D 4 HOH 39 2039 2039 HOH HOH A . D 4 HOH 40 2040 2040 HOH HOH A . D 4 HOH 41 2041 2041 HOH HOH A . D 4 HOH 42 2042 2042 HOH HOH A . D 4 HOH 43 2043 2043 HOH HOH A . D 4 HOH 44 2044 2044 HOH HOH A . D 4 HOH 45 2045 2045 HOH HOH A . D 4 HOH 46 2046 2046 HOH HOH A . D 4 HOH 47 2047 2047 HOH HOH A . D 4 HOH 48 2048 2048 HOH HOH A . D 4 HOH 49 2049 2049 HOH HOH A . D 4 HOH 50 2050 2050 HOH HOH A . D 4 HOH 51 2051 2051 HOH HOH A . D 4 HOH 52 2052 2052 HOH HOH A . D 4 HOH 53 2053 2053 HOH HOH A . D 4 HOH 54 2054 2054 HOH HOH A . D 4 HOH 55 2055 2055 HOH HOH A . D 4 HOH 56 2056 2056 HOH HOH A . D 4 HOH 57 2057 2057 HOH HOH A . D 4 HOH 58 2058 2058 HOH HOH A . D 4 HOH 59 2059 2059 HOH HOH A . D 4 HOH 60 2060 2060 HOH HOH A . D 4 HOH 61 2061 2061 HOH HOH A . D 4 HOH 62 2062 2062 HOH HOH A . D 4 HOH 63 2063 2063 HOH HOH A . D 4 HOH 64 2064 2064 HOH HOH A . D 4 HOH 65 2065 2065 HOH HOH A . D 4 HOH 66 2066 2066 HOH HOH A . D 4 HOH 67 2067 2067 HOH HOH A . D 4 HOH 68 2068 2068 HOH HOH A . D 4 HOH 69 2069 2069 HOH HOH A . D 4 HOH 70 2070 2070 HOH HOH A . D 4 HOH 71 2071 2071 HOH HOH A . D 4 HOH 72 2072 2072 HOH HOH A . D 4 HOH 73 2073 2073 HOH HOH A . D 4 HOH 74 2074 2074 HOH HOH A . D 4 HOH 75 2075 2075 HOH HOH A . D 4 HOH 76 2076 2076 HOH HOH A . D 4 HOH 77 2077 2077 HOH HOH A . D 4 HOH 78 2078 2078 HOH HOH A . D 4 HOH 79 2079 2079 HOH HOH A . D 4 HOH 80 2080 2080 HOH HOH A . D 4 HOH 81 2081 2081 HOH HOH A . D 4 HOH 82 2082 2082 HOH HOH A . D 4 HOH 83 2083 2083 HOH HOH A . D 4 HOH 84 2084 2084 HOH HOH A . D 4 HOH 85 2085 2085 HOH HOH A . D 4 HOH 86 2086 2086 HOH HOH A . D 4 HOH 87 2087 2087 HOH HOH A . D 4 HOH 88 2088 2088 HOH HOH A . D 4 HOH 89 2089 2089 HOH HOH A . D 4 HOH 90 2090 2090 HOH HOH A . D 4 HOH 91 2091 2091 HOH HOH A . D 4 HOH 92 2092 2092 HOH HOH A . D 4 HOH 93 2093 2093 HOH HOH A . D 4 HOH 94 2094 2094 HOH HOH A . D 4 HOH 95 2095 2095 HOH HOH A . D 4 HOH 96 2096 2096 HOH HOH A . D 4 HOH 97 2097 2097 HOH HOH A . D 4 HOH 98 2098 2098 HOH HOH A . D 4 HOH 99 2099 2099 HOH HOH A . D 4 HOH 100 2100 2100 HOH HOH A . D 4 HOH 101 2101 2101 HOH HOH A . D 4 HOH 102 2102 2102 HOH HOH A . D 4 HOH 103 2103 2103 HOH HOH A . D 4 HOH 104 2104 2104 HOH HOH A . D 4 HOH 105 2105 2105 HOH HOH A . D 4 HOH 106 2106 2106 HOH HOH A . D 4 HOH 107 2107 2107 HOH HOH A . D 4 HOH 108 2108 2108 HOH HOH A . D 4 HOH 109 2109 2109 HOH HOH A . D 4 HOH 110 2110 2110 HOH HOH A . D 4 HOH 111 2111 2111 HOH HOH A . D 4 HOH 112 2112 2112 HOH HOH A . # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal _software.date _software.type _software.location _software.language PHENIX refinement '(PHENIX.REFINE: 1.8.2_1309)' ? 1 ? ? ? ? XDS 'data reduction' . ? 2 ? ? ? ? XSCALE 'data scaling' . ? 3 ? ? ? ? PHASER phasing . ? 4 ? ? ? ? # _cell.entry_id 3ZKK _cell.length_a 68.045 _cell.length_b 124.049 _cell.length_c 61.334 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3ZKK _symmetry.space_group_name_H-M 'P 21 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 # _exptl.entry_id 3ZKK _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.8 _exptl_crystal.density_percent_sol 56 _exptl_crystal.description NONE _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 8 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details '0.1 M TRIS, 47% PEG 400, 5% PEG 1000, PH 7.5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K' # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 _diffrn.pdbx_serial_crystal_experiment ? # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector PIXEL _diffrn_detector.type 'DECTRIS PILATUS 6M' _diffrn_detector.pdbx_collection_date 2011-07-16 _diffrn_detector.details 'DYNAMICALLY BENDABLE MIRROR' # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'LN2 COOLED FIXED-EXIT SI(111) MONOCHROMATOR' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97935 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'SLS BEAMLINE X06SA' _diffrn_source.pdbx_synchrotron_site SLS _diffrn_source.pdbx_synchrotron_beamline X06SA _diffrn_source.pdbx_wavelength 0.97935 _diffrn_source.pdbx_wavelength_list ? # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 3ZKK _reflns.observed_criterion_sigma_I 2.0 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 45.80 _reflns.d_resolution_high 2.20 _reflns.number_obs 27024 _reflns.number_all ? _reflns.percent_possible_obs 99.5 _reflns.pdbx_Rmerge_I_obs 0.06 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 17.70 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 6.6 # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 2.20 _reflns_shell.d_res_low 2.30 _reflns_shell.percent_possible_all 97.5 _reflns_shell.Rmerge_I_obs 1.50 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 2.12 _reflns_shell.pdbx_redundancy 6.1 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 3ZKK _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 26927 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 2.00 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 45.839 _refine.ls_d_res_high 2.198 _refine.ls_percent_reflns_obs 99.16 _refine.ls_R_factor_obs 0.2034 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.2012 _refine.ls_R_factor_R_free 0.2441 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.0 _refine.ls_number_reflns_R_free 1354 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model 'MOLECULAR REPLACEMENT MODEL FROM PARTIAL MODEL BUILT FROM LOW-RESOLUTION SEMET DATASET.' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.32 _refine.pdbx_overall_phase_error 35.01 _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 3002 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 59 _refine_hist.number_atoms_solvent 112 _refine_hist.number_atoms_total 3173 _refine_hist.d_res_high 2.198 _refine_hist.d_res_low 45.839 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function f_bond_d 0.007 ? ? 3129 'X-RAY DIFFRACTION' ? f_angle_d 1.096 ? ? 4237 'X-RAY DIFFRACTION' ? f_dihedral_angle_d 20.058 ? ? 1140 'X-RAY DIFFRACTION' ? f_chiral_restr 0.076 ? ? 467 'X-RAY DIFFRACTION' ? f_plane_restr 0.004 ? ? 546 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all 'X-RAY DIFFRACTION' . 2.1976 2.2762 2444 0.4269 97.00 0.4390 . . 132 . . 'X-RAY DIFFRACTION' . 2.2762 2.3673 2502 0.3524 99.00 0.4389 . . 133 . . 'X-RAY DIFFRACTION' . 2.3673 2.4750 2506 0.3127 99.00 0.3714 . . 131 . . 'X-RAY DIFFRACTION' . 2.4750 2.6055 2516 0.2594 99.00 0.3283 . . 134 . . 'X-RAY DIFFRACTION' . 2.6055 2.7687 2545 0.2409 99.00 0.3331 . . 135 . . 'X-RAY DIFFRACTION' . 2.7687 2.9825 2532 0.2398 100.00 0.3025 . . 134 . . 'X-RAY DIFFRACTION' . 2.9825 3.2825 2579 0.2385 100.00 0.3028 . . 136 . . 'X-RAY DIFFRACTION' . 3.2825 3.7573 2587 0.2015 100.00 0.2825 . . 136 . . 'X-RAY DIFFRACTION' . 3.7573 4.7331 2619 0.1586 100.00 0.1853 . . 138 . . 'X-RAY DIFFRACTION' . 4.7331 45.8489 2743 0.1669 100.00 0.1858 . . 145 . . # _database_PDB_matrix.entry_id 3ZKK _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 3ZKK _struct.title ;Structure of the xylo-oligosaccharide specific solute binding protein from Bifidobacterium animalis subsp. lactis Bl-04 in complex with xylotetraose ; _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3ZKK _struct_keywords.pdbx_keywords 'TRANSPORT PROTEIN' _struct_keywords.text 'TRANSPORT PROTEIN, PROBIOTIC, PREBIOTIC, ABC TRANSPORT' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code C6A6Z1_BIFLB _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_db_accession C6A6Z1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3ZKK _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 7 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 413 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession C6A6Z1 _struct_ref_seq.db_align_beg 19 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 425 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 19 _struct_ref_seq.pdbx_auth_seq_align_end 425 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3ZKK GLY A 1 ? UNP C6A6Z1 ? ? 'expression tag' 13 1 1 3ZKK SER A 2 ? UNP C6A6Z1 ? ? 'expression tag' 14 2 1 3ZKK HIS A 3 ? UNP C6A6Z1 ? ? 'expression tag' 15 3 1 3ZKK MET A 4 ? UNP C6A6Z1 ? ? 'expression tag' 16 4 1 3ZKK ALA A 5 ? UNP C6A6Z1 ? ? 'expression tag' 17 5 1 3ZKK SER A 6 ? UNP C6A6Z1 ? ? 'expression tag' 18 6 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ALA A 30 ? ASN A 48 ? ALA A 42 ASN A 60 1 ? 19 HELX_P HELX_P2 2 GLN A 59 ? MET A 71 ? GLN A 71 MET A 83 1 ? 13 HELX_P HELX_P3 3 GLN A 72 ? GLY A 77 ? GLN A 84 GLY A 89 5 ? 6 HELX_P HELX_P4 4 GLY A 85 ? ASP A 94 ? GLY A 97 ASP A 106 1 ? 10 HELX_P HELX_P5 5 SER A 106 ? MET A 113 ? SER A 118 MET A 125 1 ? 8 HELX_P HELX_P6 6 THR A 116 ? ALA A 119 ? THR A 128 ALA A 131 5 ? 4 HELX_P HELX_P7 7 LYS A 142 ? GLY A 149 ? LYS A 154 GLY A 161 1 ? 8 HELX_P HELX_P8 8 THR A 156 ? SER A 170 ? THR A 168 SER A 182 1 ? 15 HELX_P HELX_P9 9 GLY A 178 ? ASP A 181 ? GLY A 190 ASP A 193 5 ? 4 HELX_P HELX_P10 10 ALA A 182 ? CYS A 197 ? ALA A 194 CYS A 209 1 ? 16 HELX_P HELX_P11 11 SER A 198 ? HIS A 209 ? SER A 210 HIS A 221 1 ? 12 HELX_P HELX_P12 12 ALA A 214 ? LEU A 229 ? ALA A 226 LEU A 241 1 ? 16 HELX_P HELX_P13 13 GLY A 235 ? THR A 239 ? GLY A 247 THR A 251 5 ? 5 HELX_P HELX_P14 14 SER A 247 ? ASN A 254 ? SER A 259 ASN A 266 1 ? 8 HELX_P HELX_P15 15 TRP A 265 ? ASP A 272 ? TRP A 277 ASP A 284 1 ? 8 HELX_P HELX_P16 16 SER A 315 ? GLU A 327 ? SER A 327 GLU A 339 1 ? 13 HELX_P HELX_P17 17 GLU A 327 ? SER A 339 ? GLU A 339 SER A 351 1 ? 13 HELX_P HELX_P18 18 GLU A 345 ? VAL A 351 ? GLU A 357 VAL A 363 5 ? 7 HELX_P HELX_P19 19 ASP A 353 ? ASP A 364 ? ASP A 365 ASP A 376 1 ? 12 HELX_P HELX_P20 20 TRP A 372 ? GLY A 378 ? TRP A 384 GLY A 390 1 ? 7 HELX_P HELX_P21 21 GLY A 378 ? SER A 394 ? GLY A 390 SER A 406 1 ? 17 HELX_P HELX_P22 22 SER A 398 ? GLN A 411 ? SER A 410 GLN A 423 1 ? 14 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 197 SG ? ? ? 1_555 A CYS 215 SG ? ? A CYS 209 A CYS 227 1_555 ? ? ? ? ? ? ? 2.043 ? ? covale1 covale both ? B XYP . O4 ? ? ? 1_555 B XYP . C1 ? ? B XYP 1 B XYP 2 1_555 ? ? ? ? ? ? ? 1.419 ? ? covale2 covale both ? B XYP . O4 ? ? ? 1_555 B XYP . C1 ? ? B XYP 2 B XYP 3 1_555 ? ? ? ? ? ? ? 1.423 ? ? covale3 covale both ? B XYP . O4 ? ? ? 1_555 B XYP . C1 ? ? B XYP 3 B XYP 4 1_555 ? ? ? ? ? ? ? 1.438 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? # _pdbx_modification_feature.ordinal 1 _pdbx_modification_feature.label_comp_id CYS _pdbx_modification_feature.label_asym_id A _pdbx_modification_feature.label_seq_id 197 _pdbx_modification_feature.label_alt_id ? _pdbx_modification_feature.modified_residue_label_comp_id CYS _pdbx_modification_feature.modified_residue_label_asym_id A _pdbx_modification_feature.modified_residue_label_seq_id 215 _pdbx_modification_feature.modified_residue_label_alt_id ? _pdbx_modification_feature.auth_comp_id CYS _pdbx_modification_feature.auth_asym_id A _pdbx_modification_feature.auth_seq_id 209 _pdbx_modification_feature.PDB_ins_code ? _pdbx_modification_feature.symmetry 1_555 _pdbx_modification_feature.modified_residue_auth_comp_id CYS _pdbx_modification_feature.modified_residue_auth_asym_id A _pdbx_modification_feature.modified_residue_auth_seq_id 227 _pdbx_modification_feature.modified_residue_PDB_ins_code ? _pdbx_modification_feature.modified_residue_symmetry 1_555 _pdbx_modification_feature.comp_id_linking_atom SG _pdbx_modification_feature.modified_residue_id_linking_atom SG _pdbx_modification_feature.modified_residue_id . _pdbx_modification_feature.ref_pcm_id . _pdbx_modification_feature.ref_comp_id . _pdbx_modification_feature.type None _pdbx_modification_feature.category 'Disulfide bridge' # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA ? 5 ? AB ? 6 ? AC ? 4 ? AD ? 7 ? AE ? 5 ? AF ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA 1 2 ? parallel AA 2 3 ? parallel AA 3 4 ? anti-parallel AA 4 5 ? parallel AB 1 2 ? parallel AB 2 3 ? parallel AB 3 4 ? anti-parallel AB 4 5 ? anti-parallel AB 5 6 ? anti-parallel AC 1 2 ? parallel AC 2 3 ? anti-parallel AC 3 4 ? anti-parallel AD 1 2 ? parallel AD 2 3 ? parallel AD 3 4 ? anti-parallel AD 4 5 ? anti-parallel AD 5 6 ? anti-parallel AD 6 7 ? parallel AE 1 2 ? parallel AE 2 3 ? anti-parallel AE 3 4 ? anti-parallel AE 4 5 ? parallel AF 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA 1 LYS A 52 ? ALA A 57 ? LYS A 64 ALA A 69 AA 2 THR A 21 ? HIS A 26 ? THR A 33 HIS A 38 AA 3 VAL A 80 ? MET A 82 ? VAL A 92 MET A 94 AA 4 LEU A 301 ? VAL A 310 ? LEU A 313 VAL A 322 AA 5 MET A 369 ? LEU A 371 ? MET A 381 LEU A 383 AB 1 LYS A 52 ? ALA A 57 ? LYS A 64 ALA A 69 AB 2 THR A 21 ? HIS A 26 ? THR A 33 HIS A 38 AB 3 VAL A 80 ? MET A 82 ? VAL A 92 MET A 94 AB 4 LEU A 301 ? VAL A 310 ? LEU A 313 VAL A 322 AB 5 VAL A 129 ? SER A 141 ? VAL A 141 SER A 153 AB 6 LEU A 283 ? PHE A 286 ? LEU A 295 PHE A 298 AC 1 ASP A 173 ? ILE A 175 ? ASP A 185 ILE A 187 AC 2 ALA A 257 ? GLY A 263 ? ALA A 269 GLY A 275 AC 3 VAL A 129 ? SER A 141 ? VAL A 141 SER A 153 AC 4 LEU A 283 ? PHE A 286 ? LEU A 295 PHE A 298 AD 1 LYS A 52 ? ALA A 57 ? LYS A 64 ALA A 69 AD 2 THR A 21 ? HIS A 26 ? THR A 33 HIS A 38 AD 3 VAL A 80 ? MET A 82 ? VAL A 92 MET A 94 AD 4 LEU A 301 ? VAL A 310 ? LEU A 313 VAL A 322 AD 5 VAL A 129 ? SER A 141 ? VAL A 141 SER A 153 AD 6 ALA A 257 ? GLY A 263 ? ALA A 269 GLY A 275 AD 7 ASP A 173 ? ILE A 175 ? ASP A 185 ILE A 187 AE 1 ASP A 173 ? ILE A 175 ? ASP A 185 ILE A 187 AE 2 ALA A 257 ? GLY A 263 ? ALA A 269 GLY A 275 AE 3 VAL A 129 ? SER A 141 ? VAL A 141 SER A 153 AE 4 LEU A 301 ? VAL A 310 ? LEU A 313 VAL A 322 AE 5 MET A 369 ? LEU A 371 ? MET A 381 LEU A 383 AF 1 THR A 121 ? PHE A 122 ? THR A 133 PHE A 134 AF 2 LYS A 125 ? VAL A 126 ? LYS A 137 VAL A 138 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA 1 2 N GLU A 54 ? N GLU A 66 O ILE A 22 ? O ILE A 34 AA 2 3 N TRP A 25 ? N TRP A 37 O VAL A 80 ? O VAL A 92 AA 3 4 N PHE A 81 ? N PHE A 93 O CYS A 309 ? O CYS A 321 AA 4 5 N GLY A 303 ? N GLY A 315 O GLN A 370 ? O GLN A 382 AB 1 2 N GLU A 54 ? N GLU A 66 O ILE A 22 ? O ILE A 34 AB 2 3 N TRP A 25 ? N TRP A 37 O VAL A 80 ? O VAL A 92 AB 3 4 N PHE A 81 ? N PHE A 93 O CYS A 309 ? O CYS A 321 AB 4 5 N PHE A 308 ? N PHE A 320 O VAL A 129 ? O VAL A 141 AB 5 6 N TYR A 140 ? N TYR A 152 O GLY A 284 ? O GLY A 296 AC 1 2 O ASP A 173 ? O ASP A 185 N ALA A 258 ? N ALA A 270 AC 2 3 N MET A 262 ? N MET A 274 O GLY A 137 ? O GLY A 149 AC 3 4 N TYR A 140 ? N TYR A 152 O GLY A 284 ? O GLY A 296 AD 1 2 N GLU A 54 ? N GLU A 66 O ILE A 22 ? O ILE A 34 AD 2 3 N TRP A 25 ? N TRP A 37 O VAL A 80 ? O VAL A 92 AD 3 4 N PHE A 81 ? N PHE A 93 O CYS A 309 ? O CYS A 321 AD 4 5 N PHE A 308 ? N PHE A 320 O VAL A 129 ? O VAL A 141 AD 5 6 N SER A 141 ? N SER A 153 O ALA A 258 ? O ALA A 270 AD 6 7 N ALA A 258 ? N ALA A 270 O ASP A 173 ? O ASP A 185 AE 1 2 O ASP A 173 ? O ASP A 185 N ALA A 258 ? N ALA A 270 AE 2 3 N MET A 262 ? N MET A 274 O GLY A 137 ? O GLY A 149 AE 3 4 N GLY A 136 ? N GLY A 148 O MET A 302 ? O MET A 314 AE 4 5 N GLY A 303 ? N GLY A 315 O GLN A 370 ? O GLN A 382 AF 1 2 N PHE A 122 ? N PHE A 134 O LYS A 125 ? O LYS A 137 # _pdbx_entry_details.entry_id 3ZKK _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? _pdbx_entry_details.has_protein_modification Y # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 O _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 SER _pdbx_validate_close_contact.auth_seq_id_1 351 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 HOH _pdbx_validate_close_contact.auth_seq_id_2 2088 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.11 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ALA A 194 ? ? 71.10 -68.31 2 1 LYS A 377 ? ? -141.21 11.86 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 13 ? A GLY 1 2 1 Y 1 A SER 14 ? A SER 2 3 1 Y 1 A HIS 15 ? A HIS 3 4 1 Y 1 A MET 16 ? A MET 4 5 1 Y 1 A ALA 17 ? A ALA 5 6 1 Y 1 A SER 18 ? A SER 6 7 1 Y 1 A MET 19 ? A MET 7 8 1 Y 1 A SER 20 ? A SER 8 9 1 Y 1 A ALA 21 ? A ALA 9 10 1 Y 1 A CYS 22 ? A CYS 10 11 1 Y 1 A GLY 23 ? A GLY 11 12 1 Y 1 A GLY 24 ? A GLY 12 13 1 Y 1 A SER 25 ? A SER 13 14 1 Y 1 A GLU 26 ? A GLU 14 15 1 Y 1 A SER 27 ? A SER 15 16 1 Y 1 A SER 28 ? A SER 16 17 1 Y 1 A SER 29 ? A SER 17 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HIS N N N N 137 HIS CA C N S 138 HIS C C N N 139 HIS O O N N 140 HIS CB C N N 141 HIS CG C Y N 142 HIS ND1 N Y N 143 HIS CD2 C Y N 144 HIS CE1 C Y N 145 HIS NE2 N Y N 146 HIS OXT O N N 147 HIS H H N N 148 HIS H2 H N N 149 HIS HA H N N 150 HIS HB2 H N N 151 HIS HB3 H N N 152 HIS HD1 H N N 153 HIS HD2 H N N 154 HIS HE1 H N N 155 HIS HE2 H N N 156 HIS HXT H N N 157 HOH O O N N 158 HOH H1 H N N 159 HOH H2 H N N 160 ILE N N N N 161 ILE CA C N S 162 ILE C C N N 163 ILE O O N N 164 ILE CB C N S 165 ILE CG1 C N N 166 ILE CG2 C N N 167 ILE CD1 C N N 168 ILE OXT O N N 169 ILE H H N N 170 ILE H2 H N N 171 ILE HA H N N 172 ILE HB H N N 173 ILE HG12 H N N 174 ILE HG13 H N N 175 ILE HG21 H N N 176 ILE HG22 H N N 177 ILE HG23 H N N 178 ILE HD11 H N N 179 ILE HD12 H N N 180 ILE HD13 H N N 181 ILE HXT H N N 182 LEU N N N N 183 LEU CA C N S 184 LEU C C N N 185 LEU O O N N 186 LEU CB C N N 187 LEU CG C N N 188 LEU CD1 C N N 189 LEU CD2 C N N 190 LEU OXT O N N 191 LEU H H N N 192 LEU H2 H N N 193 LEU HA H N N 194 LEU HB2 H N N 195 LEU HB3 H N N 196 LEU HG H N N 197 LEU HD11 H N N 198 LEU HD12 H N N 199 LEU HD13 H N N 200 LEU HD21 H N N 201 LEU HD22 H N N 202 LEU HD23 H N N 203 LEU HXT H N N 204 LYS N N N N 205 LYS CA C N S 206 LYS C C N N 207 LYS O O N N 208 LYS CB C N N 209 LYS CG C N N 210 LYS CD C N N 211 LYS CE C N N 212 LYS NZ N N N 213 LYS OXT O N N 214 LYS H H N N 215 LYS H2 H N N 216 LYS HA H N N 217 LYS HB2 H N N 218 LYS HB3 H N N 219 LYS HG2 H N N 220 LYS HG3 H N N 221 LYS HD2 H N N 222 LYS HD3 H N N 223 LYS HE2 H N N 224 LYS HE3 H N N 225 LYS HZ1 H N N 226 LYS HZ2 H N N 227 LYS HZ3 H N N 228 LYS HXT H N N 229 MET N N N N 230 MET CA C N S 231 MET C C N N 232 MET O O N N 233 MET CB C N N 234 MET CG C N N 235 MET SD S N N 236 MET CE C N N 237 MET OXT O N N 238 MET H H N N 239 MET H2 H N N 240 MET HA H N N 241 MET HB2 H N N 242 MET HB3 H N N 243 MET HG2 H N N 244 MET HG3 H N N 245 MET HE1 H N N 246 MET HE2 H N N 247 MET HE3 H N N 248 MET HXT H N N 249 P33 O22 O N N 250 P33 C21 C N N 251 P33 C20 C N N 252 P33 O19 O N N 253 P33 C18 C N N 254 P33 C17 C N N 255 P33 O16 O N N 256 P33 C15 C N N 257 P33 C14 C N N 258 P33 O13 O N N 259 P33 C12 C N N 260 P33 C11 C N N 261 P33 O10 O N N 262 P33 C9 C N N 263 P33 C8 C N N 264 P33 O7 O N N 265 P33 C6 C N N 266 P33 C5 C N N 267 P33 O4 O N N 268 P33 C3 C N N 269 P33 C2 C N N 270 P33 O1 O N N 271 P33 H22 H N N 272 P33 H211 H N N 273 P33 H212 H N N 274 P33 H201 H N N 275 P33 H202 H N N 276 P33 H181 H N N 277 P33 H182 H N N 278 P33 H171 H N N 279 P33 H172 H N N 280 P33 H151 H N N 281 P33 H152 H N N 282 P33 H141 H N N 283 P33 H142 H N N 284 P33 H121 H N N 285 P33 H122 H N N 286 P33 H111 H N N 287 P33 H112 H N N 288 P33 H91 H N N 289 P33 H92 H N N 290 P33 H81 H N N 291 P33 H82 H N N 292 P33 H61 H N N 293 P33 H62 H N N 294 P33 H51 H N N 295 P33 H52 H N N 296 P33 H31 H N N 297 P33 H32 H N N 298 P33 H21 H N N 299 P33 H22A H N N 300 P33 HO1 H N N 301 PHE N N N N 302 PHE CA C N S 303 PHE C C N N 304 PHE O O N N 305 PHE CB C N N 306 PHE CG C Y N 307 PHE CD1 C Y N 308 PHE CD2 C Y N 309 PHE CE1 C Y N 310 PHE CE2 C Y N 311 PHE CZ C Y N 312 PHE OXT O N N 313 PHE H H N N 314 PHE H2 H N N 315 PHE HA H N N 316 PHE HB2 H N N 317 PHE HB3 H N N 318 PHE HD1 H N N 319 PHE HD2 H N N 320 PHE HE1 H N N 321 PHE HE2 H N N 322 PHE HZ H N N 323 PHE HXT H N N 324 PRO N N N N 325 PRO CA C N S 326 PRO C C N N 327 PRO O O N N 328 PRO CB C N N 329 PRO CG C N N 330 PRO CD C N N 331 PRO OXT O N N 332 PRO H H N N 333 PRO HA H N N 334 PRO HB2 H N N 335 PRO HB3 H N N 336 PRO HG2 H N N 337 PRO HG3 H N N 338 PRO HD2 H N N 339 PRO HD3 H N N 340 PRO HXT H N N 341 SER N N N N 342 SER CA C N S 343 SER C C N N 344 SER O O N N 345 SER CB C N N 346 SER OG O N N 347 SER OXT O N N 348 SER H H N N 349 SER H2 H N N 350 SER HA H N N 351 SER HB2 H N N 352 SER HB3 H N N 353 SER HG H N N 354 SER HXT H N N 355 THR N N N N 356 THR CA C N S 357 THR C C N N 358 THR O O N N 359 THR CB C N R 360 THR OG1 O N N 361 THR CG2 C N N 362 THR OXT O N N 363 THR H H N N 364 THR H2 H N N 365 THR HA H N N 366 THR HB H N N 367 THR HG1 H N N 368 THR HG21 H N N 369 THR HG22 H N N 370 THR HG23 H N N 371 THR HXT H N N 372 TRP N N N N 373 TRP CA C N S 374 TRP C C N N 375 TRP O O N N 376 TRP CB C N N 377 TRP CG C Y N 378 TRP CD1 C Y N 379 TRP CD2 C Y N 380 TRP NE1 N Y N 381 TRP CE2 C Y N 382 TRP CE3 C Y N 383 TRP CZ2 C Y N 384 TRP CZ3 C Y N 385 TRP CH2 C Y N 386 TRP OXT O N N 387 TRP H H N N 388 TRP H2 H N N 389 TRP HA H N N 390 TRP HB2 H N N 391 TRP HB3 H N N 392 TRP HD1 H N N 393 TRP HE1 H N N 394 TRP HE3 H N N 395 TRP HZ2 H N N 396 TRP HZ3 H N N 397 TRP HH2 H N N 398 TRP HXT H N N 399 TYR N N N N 400 TYR CA C N S 401 TYR C C N N 402 TYR O O N N 403 TYR CB C N N 404 TYR CG C Y N 405 TYR CD1 C Y N 406 TYR CD2 C Y N 407 TYR CE1 C Y N 408 TYR CE2 C Y N 409 TYR CZ C Y N 410 TYR OH O N N 411 TYR OXT O N N 412 TYR H H N N 413 TYR H2 H N N 414 TYR HA H N N 415 TYR HB2 H N N 416 TYR HB3 H N N 417 TYR HD1 H N N 418 TYR HD2 H N N 419 TYR HE1 H N N 420 TYR HE2 H N N 421 TYR HH H N N 422 TYR HXT H N N 423 VAL N N N N 424 VAL CA C N S 425 VAL C C N N 426 VAL O O N N 427 VAL CB C N N 428 VAL CG1 C N N 429 VAL CG2 C N N 430 VAL OXT O N N 431 VAL H H N N 432 VAL H2 H N N 433 VAL HA H N N 434 VAL HB H N N 435 VAL HG11 H N N 436 VAL HG12 H N N 437 VAL HG13 H N N 438 VAL HG21 H N N 439 VAL HG22 H N N 440 VAL HG23 H N N 441 VAL HXT H N N 442 XYP O1 O N N 443 XYP C1 C N R 444 XYP C2 C N R 445 XYP C3 C N S 446 XYP C4 C N R 447 XYP C5 C N N 448 XYP O2 O N N 449 XYP O3 O N N 450 XYP O4 O N N 451 XYP O5 O N N 452 XYP HO1 H N N 453 XYP H1 H N N 454 XYP H2 H N N 455 XYP H3 H N N 456 XYP H4 H N N 457 XYP H51 H N N 458 XYP H52 H N N 459 XYP HO2 H N N 460 XYP HO3 H N N 461 XYP HO4 H N N 462 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 HOH O H1 sing N N 150 HOH O H2 sing N N 151 ILE N CA sing N N 152 ILE N H sing N N 153 ILE N H2 sing N N 154 ILE CA C sing N N 155 ILE CA CB sing N N 156 ILE CA HA sing N N 157 ILE C O doub N N 158 ILE C OXT sing N N 159 ILE CB CG1 sing N N 160 ILE CB CG2 sing N N 161 ILE CB HB sing N N 162 ILE CG1 CD1 sing N N 163 ILE CG1 HG12 sing N N 164 ILE CG1 HG13 sing N N 165 ILE CG2 HG21 sing N N 166 ILE CG2 HG22 sing N N 167 ILE CG2 HG23 sing N N 168 ILE CD1 HD11 sing N N 169 ILE CD1 HD12 sing N N 170 ILE CD1 HD13 sing N N 171 ILE OXT HXT sing N N 172 LEU N CA sing N N 173 LEU N H sing N N 174 LEU N H2 sing N N 175 LEU CA C sing N N 176 LEU CA CB sing N N 177 LEU CA HA sing N N 178 LEU C O doub N N 179 LEU C OXT sing N N 180 LEU CB CG sing N N 181 LEU CB HB2 sing N N 182 LEU CB HB3 sing N N 183 LEU CG CD1 sing N N 184 LEU CG CD2 sing N N 185 LEU CG HG sing N N 186 LEU CD1 HD11 sing N N 187 LEU CD1 HD12 sing N N 188 LEU CD1 HD13 sing N N 189 LEU CD2 HD21 sing N N 190 LEU CD2 HD22 sing N N 191 LEU CD2 HD23 sing N N 192 LEU OXT HXT sing N N 193 LYS N CA sing N N 194 LYS N H sing N N 195 LYS N H2 sing N N 196 LYS CA C sing N N 197 LYS CA CB sing N N 198 LYS CA HA sing N N 199 LYS C O doub N N 200 LYS C OXT sing N N 201 LYS CB CG sing N N 202 LYS CB HB2 sing N N 203 LYS CB HB3 sing N N 204 LYS CG CD sing N N 205 LYS CG HG2 sing N N 206 LYS CG HG3 sing N N 207 LYS CD CE sing N N 208 LYS CD HD2 sing N N 209 LYS CD HD3 sing N N 210 LYS CE NZ sing N N 211 LYS CE HE2 sing N N 212 LYS CE HE3 sing N N 213 LYS NZ HZ1 sing N N 214 LYS NZ HZ2 sing N N 215 LYS NZ HZ3 sing N N 216 LYS OXT HXT sing N N 217 MET N CA sing N N 218 MET N H sing N N 219 MET N H2 sing N N 220 MET CA C sing N N 221 MET CA CB sing N N 222 MET CA HA sing N N 223 MET C O doub N N 224 MET C OXT sing N N 225 MET CB CG sing N N 226 MET CB HB2 sing N N 227 MET CB HB3 sing N N 228 MET CG SD sing N N 229 MET CG HG2 sing N N 230 MET CG HG3 sing N N 231 MET SD CE sing N N 232 MET CE HE1 sing N N 233 MET CE HE2 sing N N 234 MET CE HE3 sing N N 235 MET OXT HXT sing N N 236 P33 O22 C21 sing N N 237 P33 O22 H22 sing N N 238 P33 C21 C20 sing N N 239 P33 C21 H211 sing N N 240 P33 C21 H212 sing N N 241 P33 C20 O19 sing N N 242 P33 C20 H201 sing N N 243 P33 C20 H202 sing N N 244 P33 O19 C18 sing N N 245 P33 C18 C17 sing N N 246 P33 C18 H181 sing N N 247 P33 C18 H182 sing N N 248 P33 C17 O16 sing N N 249 P33 C17 H171 sing N N 250 P33 C17 H172 sing N N 251 P33 O16 C15 sing N N 252 P33 C15 C14 sing N N 253 P33 C15 H151 sing N N 254 P33 C15 H152 sing N N 255 P33 C14 O13 sing N N 256 P33 C14 H141 sing N N 257 P33 C14 H142 sing N N 258 P33 O13 C12 sing N N 259 P33 C12 C11 sing N N 260 P33 C12 H121 sing N N 261 P33 C12 H122 sing N N 262 P33 C11 O10 sing N N 263 P33 C11 H111 sing N N 264 P33 C11 H112 sing N N 265 P33 O10 C9 sing N N 266 P33 C9 C8 sing N N 267 P33 C9 H91 sing N N 268 P33 C9 H92 sing N N 269 P33 C8 O7 sing N N 270 P33 C8 H81 sing N N 271 P33 C8 H82 sing N N 272 P33 O7 C6 sing N N 273 P33 C6 C5 sing N N 274 P33 C6 H61 sing N N 275 P33 C6 H62 sing N N 276 P33 C5 O4 sing N N 277 P33 C5 H51 sing N N 278 P33 C5 H52 sing N N 279 P33 O4 C3 sing N N 280 P33 C3 C2 sing N N 281 P33 C3 H31 sing N N 282 P33 C3 H32 sing N N 283 P33 C2 O1 sing N N 284 P33 C2 H21 sing N N 285 P33 C2 H22A sing N N 286 P33 O1 HO1 sing N N 287 PHE N CA sing N N 288 PHE N H sing N N 289 PHE N H2 sing N N 290 PHE CA C sing N N 291 PHE CA CB sing N N 292 PHE CA HA sing N N 293 PHE C O doub N N 294 PHE C OXT sing N N 295 PHE CB CG sing N N 296 PHE CB HB2 sing N N 297 PHE CB HB3 sing N N 298 PHE CG CD1 doub Y N 299 PHE CG CD2 sing Y N 300 PHE CD1 CE1 sing Y N 301 PHE CD1 HD1 sing N N 302 PHE CD2 CE2 doub Y N 303 PHE CD2 HD2 sing N N 304 PHE CE1 CZ doub Y N 305 PHE CE1 HE1 sing N N 306 PHE CE2 CZ sing Y N 307 PHE CE2 HE2 sing N N 308 PHE CZ HZ sing N N 309 PHE OXT HXT sing N N 310 PRO N CA sing N N 311 PRO N CD sing N N 312 PRO N H sing N N 313 PRO CA C sing N N 314 PRO CA CB sing N N 315 PRO CA HA sing N N 316 PRO C O doub N N 317 PRO C OXT sing N N 318 PRO CB CG sing N N 319 PRO CB HB2 sing N N 320 PRO CB HB3 sing N N 321 PRO CG CD sing N N 322 PRO CG HG2 sing N N 323 PRO CG HG3 sing N N 324 PRO CD HD2 sing N N 325 PRO CD HD3 sing N N 326 PRO OXT HXT sing N N 327 SER N CA sing N N 328 SER N H sing N N 329 SER N H2 sing N N 330 SER CA C sing N N 331 SER CA CB sing N N 332 SER CA HA sing N N 333 SER C O doub N N 334 SER C OXT sing N N 335 SER CB OG sing N N 336 SER CB HB2 sing N N 337 SER CB HB3 sing N N 338 SER OG HG sing N N 339 SER OXT HXT sing N N 340 THR N CA sing N N 341 THR N H sing N N 342 THR N H2 sing N N 343 THR CA C sing N N 344 THR CA CB sing N N 345 THR CA HA sing N N 346 THR C O doub N N 347 THR C OXT sing N N 348 THR CB OG1 sing N N 349 THR CB CG2 sing N N 350 THR CB HB sing N N 351 THR OG1 HG1 sing N N 352 THR CG2 HG21 sing N N 353 THR CG2 HG22 sing N N 354 THR CG2 HG23 sing N N 355 THR OXT HXT sing N N 356 TRP N CA sing N N 357 TRP N H sing N N 358 TRP N H2 sing N N 359 TRP CA C sing N N 360 TRP CA CB sing N N 361 TRP CA HA sing N N 362 TRP C O doub N N 363 TRP C OXT sing N N 364 TRP CB CG sing N N 365 TRP CB HB2 sing N N 366 TRP CB HB3 sing N N 367 TRP CG CD1 doub Y N 368 TRP CG CD2 sing Y N 369 TRP CD1 NE1 sing Y N 370 TRP CD1 HD1 sing N N 371 TRP CD2 CE2 doub Y N 372 TRP CD2 CE3 sing Y N 373 TRP NE1 CE2 sing Y N 374 TRP NE1 HE1 sing N N 375 TRP CE2 CZ2 sing Y N 376 TRP CE3 CZ3 doub Y N 377 TRP CE3 HE3 sing N N 378 TRP CZ2 CH2 doub Y N 379 TRP CZ2 HZ2 sing N N 380 TRP CZ3 CH2 sing Y N 381 TRP CZ3 HZ3 sing N N 382 TRP CH2 HH2 sing N N 383 TRP OXT HXT sing N N 384 TYR N CA sing N N 385 TYR N H sing N N 386 TYR N H2 sing N N 387 TYR CA C sing N N 388 TYR CA CB sing N N 389 TYR CA HA sing N N 390 TYR C O doub N N 391 TYR C OXT sing N N 392 TYR CB CG sing N N 393 TYR CB HB2 sing N N 394 TYR CB HB3 sing N N 395 TYR CG CD1 doub Y N 396 TYR CG CD2 sing Y N 397 TYR CD1 CE1 sing Y N 398 TYR CD1 HD1 sing N N 399 TYR CD2 CE2 doub Y N 400 TYR CD2 HD2 sing N N 401 TYR CE1 CZ doub Y N 402 TYR CE1 HE1 sing N N 403 TYR CE2 CZ sing Y N 404 TYR CE2 HE2 sing N N 405 TYR CZ OH sing N N 406 TYR OH HH sing N N 407 TYR OXT HXT sing N N 408 VAL N CA sing N N 409 VAL N H sing N N 410 VAL N H2 sing N N 411 VAL CA C sing N N 412 VAL CA CB sing N N 413 VAL CA HA sing N N 414 VAL C O doub N N 415 VAL C OXT sing N N 416 VAL CB CG1 sing N N 417 VAL CB CG2 sing N N 418 VAL CB HB sing N N 419 VAL CG1 HG11 sing N N 420 VAL CG1 HG12 sing N N 421 VAL CG1 HG13 sing N N 422 VAL CG2 HG21 sing N N 423 VAL CG2 HG22 sing N N 424 VAL CG2 HG23 sing N N 425 VAL OXT HXT sing N N 426 XYP O1 C1 sing N N 427 XYP O1 HO1 sing N N 428 XYP C1 C2 sing N N 429 XYP C1 O5 sing N N 430 XYP C1 H1 sing N N 431 XYP C2 C3 sing N N 432 XYP C2 O2 sing N N 433 XYP C2 H2 sing N N 434 XYP C3 C4 sing N N 435 XYP C3 O3 sing N N 436 XYP C3 H3 sing N N 437 XYP C4 C5 sing N N 438 XYP C4 O4 sing N N 439 XYP C4 H4 sing N N 440 XYP C5 O5 sing N N 441 XYP C5 H51 sing N N 442 XYP C5 H52 sing N N 443 XYP O2 HO2 sing N N 444 XYP O3 HO3 sing N N 445 XYP O4 HO4 sing N N 446 # loop_ _pdbx_entity_branch_list.entity_id _pdbx_entity_branch_list.comp_id _pdbx_entity_branch_list.num _pdbx_entity_branch_list.hetero 2 XYP 1 n 2 XYP 2 n 2 XYP 3 n 2 XYP 4 n # _pdbx_initial_refinement_model.accession_code ? _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name Other _pdbx_initial_refinement_model.details 'MOLECULAR REPLACEMENT MODEL FROM PARTIAL MODEL BUILT FROM LOW-RESOLUTION SEMET DATASET.' # _atom_sites.entry_id 3ZKK _atom_sites.fract_transf_matrix[1][1] 0.014696 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.008061 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.016304 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_