data_3ZLO # _entry.id 3ZLO # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.383 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3ZLO pdb_00003zlo 10.2210/pdb3zlo/pdb PDBE EBI-55716 ? ? WWPDB D_1290055716 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.content_type _pdbx_database_related.details PDB 3ZK6 unspecified 'CRYSTAL STRUCTURE OF BCL-XL IN COMPLEX WITH INHIBITOR (COMPOUND 2).' PDB 3ZLN unspecified 'CRYSTAL STRUCTURE OF BCL-XL IN COMPLEX WITH INHIBITOR (COMPOUND 3).' PDB 3ZLR unspecified 'CRYSTAL STRUCTURE OF BCL-XL IN COMPLEX WITH INHIBITOR (WEHI-539).' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3ZLO _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 2013-02-04 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Czabotar, P.E.' 1 ? 'Lessene, G.L.' 2 ? 'Smith, B.J.' 3 ? 'Colman, P.M.' 4 ? # _citation.id primary _citation.title 'Structure-Guided Design of a Selective Bcl-Xl Inhibitor' _citation.journal_abbrev Nat.Chem.Biol. _citation.journal_volume 9 _citation.page_first 390 _citation.page_last 397 _citation.year 2013 _citation.journal_id_ASTM ? _citation.country US _citation.journal_id_ISSN 1552-4450 _citation.journal_id_CSD ? _citation.book_publisher ? _citation.pdbx_database_id_PubMed 23603658 _citation.pdbx_database_id_DOI 10.1038/NCHEMBIO.1246 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Lessene, G.L.' 1 ? primary 'Czabotar, P.E.' 2 ? primary 'Sleebs, B.E.' 3 ? primary 'Zobel, K.' 4 ? primary 'Lowes, K.L.' 5 ? primary 'Adams, J.M.' 6 ? primary 'Baell, J.B.' 7 ? primary 'Colman, P.M.' 8 ? primary 'Deshayes, K.' 9 ? primary 'Fairbrother, W.J.' 10 ? primary 'Flygare, J.A.' 11 ? primary 'Gibbons, P.' 12 ? primary 'Kersten, W.J.A.' 13 ? primary 'Kulasegaram, S.' 14 ? primary 'Moss, R.M.' 15 ? primary 'Parisot, J.P.' 16 ? primary 'Smith, B.J.' 17 ? primary 'Street, I.P.' 18 ? primary 'Yang, H.' 19 ? primary 'Huang, D.C.S.' 20 ? primary 'Watson, K.G.' 21 ? # _cell.entry_id 3ZLO _cell.length_a 67.832 _cell.length_b 67.832 _cell.length_c 67.383 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3ZLO _symmetry.space_group_name_H-M 'P 32 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'BCL-2-LIKE PROTEIN 1' 20804.918 1 ? ? 'RESIDUES 1-44 AND 85-209' ? 2 non-polymer syn '2-[(8E)-8-(1,3-benzothiazol-2-ylhydrazinylidene)-6,7-dihydro-5H-naphthalen-2-yl]-5-(4-phenylbutyl)-1,3-thiazole-4-carboxylic acid' 552.710 1 ? ? ? ? 3 water nat water 18.015 6 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'BCL2-L-1, APOPTOSIS REGULATOR BCL-X, BCL-XL' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MSMAMSQSNRELVVDFLSYKLSQKGYSWSQFSDVEENRTEAPEGTESEAVKQALREAGDEFELRYRRAFSDLTSQLHITP GTAYQSFEQVVNELFRDGVNWGRIVAFFSFGGALCVESVDKEMQVLVSRIAAWMATYLNDHLEPWIQENGGWDTFVELYG NNAAAESRKGQERLEHHHHHH ; _entity_poly.pdbx_seq_one_letter_code_can ;MSMAMSQSNRELVVDFLSYKLSQKGYSWSQFSDVEENRTEAPEGTESEAVKQALREAGDEFELRYRRAFSDLTSQLHITP GTAYQSFEQVVNELFRDGVNWGRIVAFFSFGGALCVESVDKEMQVLVSRIAAWMATYLNDHLEPWIQENGGWDTFVELYG NNAAAESRKGQERLEHHHHHH ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 SER n 1 3 MET n 1 4 ALA n 1 5 MET n 1 6 SER n 1 7 GLN n 1 8 SER n 1 9 ASN n 1 10 ARG n 1 11 GLU n 1 12 LEU n 1 13 VAL n 1 14 VAL n 1 15 ASP n 1 16 PHE n 1 17 LEU n 1 18 SER n 1 19 TYR n 1 20 LYS n 1 21 LEU n 1 22 SER n 1 23 GLN n 1 24 LYS n 1 25 GLY n 1 26 TYR n 1 27 SER n 1 28 TRP n 1 29 SER n 1 30 GLN n 1 31 PHE n 1 32 SER n 1 33 ASP n 1 34 VAL n 1 35 GLU n 1 36 GLU n 1 37 ASN n 1 38 ARG n 1 39 THR n 1 40 GLU n 1 41 ALA n 1 42 PRO n 1 43 GLU n 1 44 GLY n 1 45 THR n 1 46 GLU n 1 47 SER n 1 48 GLU n 1 49 ALA n 1 50 VAL n 1 51 LYS n 1 52 GLN n 1 53 ALA n 1 54 LEU n 1 55 ARG n 1 56 GLU n 1 57 ALA n 1 58 GLY n 1 59 ASP n 1 60 GLU n 1 61 PHE n 1 62 GLU n 1 63 LEU n 1 64 ARG n 1 65 TYR n 1 66 ARG n 1 67 ARG n 1 68 ALA n 1 69 PHE n 1 70 SER n 1 71 ASP n 1 72 LEU n 1 73 THR n 1 74 SER n 1 75 GLN n 1 76 LEU n 1 77 HIS n 1 78 ILE n 1 79 THR n 1 80 PRO n 1 81 GLY n 1 82 THR n 1 83 ALA n 1 84 TYR n 1 85 GLN n 1 86 SER n 1 87 PHE n 1 88 GLU n 1 89 GLN n 1 90 VAL n 1 91 VAL n 1 92 ASN n 1 93 GLU n 1 94 LEU n 1 95 PHE n 1 96 ARG n 1 97 ASP n 1 98 GLY n 1 99 VAL n 1 100 ASN n 1 101 TRP n 1 102 GLY n 1 103 ARG n 1 104 ILE n 1 105 VAL n 1 106 ALA n 1 107 PHE n 1 108 PHE n 1 109 SER n 1 110 PHE n 1 111 GLY n 1 112 GLY n 1 113 ALA n 1 114 LEU n 1 115 CYS n 1 116 VAL n 1 117 GLU n 1 118 SER n 1 119 VAL n 1 120 ASP n 1 121 LYS n 1 122 GLU n 1 123 MET n 1 124 GLN n 1 125 VAL n 1 126 LEU n 1 127 VAL n 1 128 SER n 1 129 ARG n 1 130 ILE n 1 131 ALA n 1 132 ALA n 1 133 TRP n 1 134 MET n 1 135 ALA n 1 136 THR n 1 137 TYR n 1 138 LEU n 1 139 ASN n 1 140 ASP n 1 141 HIS n 1 142 LEU n 1 143 GLU n 1 144 PRO n 1 145 TRP n 1 146 ILE n 1 147 GLN n 1 148 GLU n 1 149 ASN n 1 150 GLY n 1 151 GLY n 1 152 TRP n 1 153 ASP n 1 154 THR n 1 155 PHE n 1 156 VAL n 1 157 GLU n 1 158 LEU n 1 159 TYR n 1 160 GLY n 1 161 ASN n 1 162 ASN n 1 163 ALA n 1 164 ALA n 1 165 ALA n 1 166 GLU n 1 167 SER n 1 168 ARG n 1 169 LYS n 1 170 GLY n 1 171 GLN n 1 172 GLU n 1 173 ARG n 1 174 LEU n 1 175 GLU n 1 176 HIS n 1 177 HIS n 1 178 HIS n 1 179 HIS n 1 180 HIS n 1 181 HIS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name HUMAN _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'HOMO SAPIENS' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'ESCHERICHIA COLI' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector PGEX-6P3 _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code B2CL1_HUMAN _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_db_accession Q07817 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3ZLO A 5 ? 48 ? Q07817 1 ? 44 ? 1 44 2 1 3ZLO A 49 ? 173 ? Q07817 85 ? 209 ? 85 209 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3ZLO MET A 1 ? UNP Q07817 ? ? 'expression tag' -3 1 1 3ZLO SER A 2 ? UNP Q07817 ? ? 'expression tag' -2 2 1 3ZLO MET A 3 ? UNP Q07817 ? ? 'expression tag' -1 3 1 3ZLO ALA A 4 ? UNP Q07817 ? ? 'expression tag' 0 4 1 3ZLO LEU A 174 ? UNP Q07817 ? ? 'expression tag' 210 5 1 3ZLO GLU A 175 ? UNP Q07817 ? ? 'expression tag' 211 6 1 3ZLO HIS A 176 ? UNP Q07817 ? ? 'expression tag' 212 7 1 3ZLO HIS A 177 ? UNP Q07817 ? ? 'expression tag' 213 8 1 3ZLO HIS A 178 ? UNP Q07817 ? ? 'expression tag' 214 9 1 3ZLO HIS A 179 ? UNP Q07817 ? ? 'expression tag' 215 10 1 3ZLO HIS A 180 ? UNP Q07817 ? ? 'expression tag' 216 11 1 3ZLO HIS A 181 ? UNP Q07817 ? ? 'expression tag' 217 12 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 X8U non-polymer . '2-[(8E)-8-(1,3-benzothiazol-2-ylhydrazinylidene)-6,7-dihydro-5H-naphthalen-2-yl]-5-(4-phenylbutyl)-1,3-thiazole-4-carboxylic acid' ? 'C31 H28 N4 O2 S2' 552.710 # _exptl.entry_id 3ZLO _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.15 _exptl_crystal.density_percent_sol 47.76 _exptl_crystal.description NONE # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.0 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details '2 M (NH4)2SO4, 0.5 M GUANADINE HCL, 0.1 M MES PH 6.0' # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type 'RIGAKU RAXIS-IV' _diffrn_detector.pdbx_collection_date 2007-09-03 _diffrn_detector.details 'MEECO CAPILLARY' # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'NI FILTER' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type 'RIGAKU MICROMAX' _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength 1.5418 _diffrn_source.pdbx_wavelength_list ? # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 3ZLO _reflns.observed_criterion_sigma_I -3.0 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 50.00 _reflns.d_resolution_high 2.60 _reflns.number_obs 5766 _reflns.number_all ? _reflns.percent_possible_obs 99.9 _reflns.pdbx_Rmerge_I_obs 0.09 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 0.00 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 4.4 _reflns.pdbx_CC_half ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_Rrim_I_all ? # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 2.60 _reflns_shell.d_res_low 2.69 _reflns_shell.percent_possible_all 99.1 _reflns_shell.Rmerge_I_obs 0.55 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 3.50 _reflns_shell.pdbx_redundancy 3.5 _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_CC_half ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_Rrim_I_all ? # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 3ZLO _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 5766 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.38 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 33.916 _refine.ls_d_res_high 2.601 _refine.ls_percent_reflns_obs 99.88 _refine.ls_R_factor_obs 0.1972 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.1932 _refine.ls_R_factor_R_free 0.2822 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.6 _refine.ls_number_reflns_R_free 265 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model 'PDB ENTRY 3ZK6 CHAIN A' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.40 _refine.pdbx_overall_phase_error 31.36 _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1142 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 39 _refine_hist.number_atoms_solvent 6 _refine_hist.number_atoms_total 1187 _refine_hist.d_res_high 2.601 _refine_hist.d_res_low 33.916 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function f_bond_d 0.009 ? ? 1213 'X-RAY DIFFRACTION' ? f_angle_d 1.188 ? ? 1644 'X-RAY DIFFRACTION' ? f_dihedral_angle_d 13.438 ? ? 425 'X-RAY DIFFRACTION' ? f_chiral_restr 0.069 ? ? 167 'X-RAY DIFFRACTION' ? f_plane_restr 0.005 ? ? 211 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.number_reflns_obs 'X-RAY DIFFRACTION' . 2.6011 3.2767 2678 0.2517 100.00 0.3517 . . 137 . . . . 'X-RAY DIFFRACTION' . 3.2767 33.9189 2823 0.1785 100.00 0.2630 . . 128 . . . . # _struct.entry_id 3ZLO _struct.title 'Crystal structure of BCL-XL in complex with inhibitor (Compound 6)' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3ZLO _struct_keywords.pdbx_keywords APOPTOSIS _struct_keywords.text 'APOPTOSIS, INHIBITOR' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 6 ? LYS A 24 ? SER A 2 LYS A 20 1 ? 19 HELX_P HELX_P2 2 GLU A 46 ? TYR A 65 ? GLU A 42 TYR A 101 1 ? 20 HELX_P HELX_P3 3 ARG A 66 ? PHE A 69 ? ARG A 102 PHE A 105 5 ? 4 HELX_P HELX_P4 4 ASP A 71 ? LEU A 76 ? ASP A 107 LEU A 112 1 ? 6 HELX_P HELX_P5 5 ALA A 83 ? PHE A 95 ? ALA A 119 PHE A 131 1 ? 13 HELX_P HELX_P6 6 ASN A 100 ? LYS A 121 ? ASN A 136 LYS A 157 1 ? 22 HELX_P HELX_P7 7 VAL A 125 ? LEU A 142 ? VAL A 161 LEU A 178 1 ? 18 HELX_P HELX_P8 8 LEU A 142 ? ASN A 149 ? LEU A 178 ASN A 185 1 ? 8 HELX_P HELX_P9 9 GLY A 150 ? GLY A 160 ? GLY A 186 GLY A 196 1 ? 11 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id A _struct_site.pdbx_auth_comp_id X8U _struct_site.pdbx_auth_seq_id 1198 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 16 _struct_site.details 'BINDING SITE FOR RESIDUE X8U A 1198' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 16 ALA A 57 ? ALA A 93 . ? 1_555 ? 2 AC1 16 PHE A 61 ? PHE A 97 . ? 1_555 ? 3 AC1 16 TYR A 65 ? TYR A 101 . ? 1_555 ? 4 AC1 16 PHE A 69 ? PHE A 105 . ? 1_555 ? 5 AC1 16 SER A 70 ? SER A 106 . ? 1_555 ? 6 AC1 16 ASP A 71 ? ASP A 107 . ? 1_555 ? 7 AC1 16 LEU A 72 ? LEU A 108 . ? 1_555 ? 8 AC1 16 GLU A 93 ? GLU A 129 . ? 1_555 ? 9 AC1 16 LEU A 94 ? LEU A 130 . ? 1_555 ? 10 AC1 16 ASN A 100 ? ASN A 136 . ? 1_555 ? 11 AC1 16 GLY A 102 ? GLY A 138 . ? 1_555 ? 12 AC1 16 ARG A 103 ? ARG A 139 . ? 1_555 ? 13 AC1 16 SER A 109 ? SER A 145 . ? 1_555 ? 14 AC1 16 PHE A 110 ? PHE A 146 . ? 1_555 ? 15 AC1 16 GLN A 124 ? GLN A 160 . ? 5_445 ? 16 AC1 16 TYR A 159 ? TYR A 195 . ? 1_555 ? # _database_PDB_matrix.entry_id 3ZLO _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3ZLO _atom_sites.fract_transf_matrix[1][1] 0.014742 _atom_sites.fract_transf_matrix[1][2] 0.008511 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.017023 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.014841 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 -3 ? ? ? A . n A 1 2 SER 2 -2 ? ? ? A . n A 1 3 MET 3 -1 ? ? ? A . n A 1 4 ALA 4 0 ? ? ? A . n A 1 5 MET 5 1 ? ? ? A . n A 1 6 SER 6 2 2 SER SER A . n A 1 7 GLN 7 3 3 GLN GLN A . n A 1 8 SER 8 4 4 SER SER A . n A 1 9 ASN 9 5 5 ASN ASN A . n A 1 10 ARG 10 6 6 ARG ARG A . n A 1 11 GLU 11 7 7 GLU GLU A . n A 1 12 LEU 12 8 8 LEU LEU A . n A 1 13 VAL 13 9 9 VAL VAL A . n A 1 14 VAL 14 10 10 VAL VAL A . n A 1 15 ASP 15 11 11 ASP ASP A . n A 1 16 PHE 16 12 12 PHE PHE A . n A 1 17 LEU 17 13 13 LEU LEU A . n A 1 18 SER 18 14 14 SER SER A . n A 1 19 TYR 19 15 15 TYR TYR A . n A 1 20 LYS 20 16 16 LYS LYS A . n A 1 21 LEU 21 17 17 LEU LEU A . n A 1 22 SER 22 18 18 SER SER A . n A 1 23 GLN 23 19 19 GLN GLN A . n A 1 24 LYS 24 20 20 LYS LYS A . n A 1 25 GLY 25 21 21 GLY GLY A . n A 1 26 TYR 26 22 22 TYR TYR A . n A 1 27 SER 27 23 23 SER SER A . n A 1 28 TRP 28 24 24 TRP TRP A . n A 1 29 SER 29 25 25 SER SER A . n A 1 30 GLN 30 26 26 GLN GLN A . n A 1 31 PHE 31 27 ? ? ? A . n A 1 32 SER 32 28 ? ? ? A . n A 1 33 ASP 33 29 ? ? ? A . n A 1 34 VAL 34 30 ? ? ? A . n A 1 35 GLU 35 31 ? ? ? A . n A 1 36 GLU 36 32 ? ? ? A . n A 1 37 ASN 37 33 ? ? ? A . n A 1 38 ARG 38 34 ? ? ? A . n A 1 39 THR 39 35 ? ? ? A . n A 1 40 GLU 40 36 ? ? ? A . n A 1 41 ALA 41 37 ? ? ? A . n A 1 42 PRO 42 38 ? ? ? A . n A 1 43 GLU 43 39 ? ? ? A . n A 1 44 GLY 44 40 ? ? ? A . n A 1 45 THR 45 41 41 THR THR A . n A 1 46 GLU 46 42 42 GLU GLU A . n A 1 47 SER 47 43 43 SER SER A . n A 1 48 GLU 48 44 44 GLU GLU A . n A 1 49 ALA 49 85 85 ALA ALA A . n A 1 50 VAL 50 86 86 VAL VAL A . n A 1 51 LYS 51 87 87 LYS LYS A . n A 1 52 GLN 52 88 88 GLN GLN A . n A 1 53 ALA 53 89 89 ALA ALA A . n A 1 54 LEU 54 90 90 LEU LEU A . n A 1 55 ARG 55 91 91 ARG ARG A . n A 1 56 GLU 56 92 92 GLU GLU A . n A 1 57 ALA 57 93 93 ALA ALA A . n A 1 58 GLY 58 94 94 GLY GLY A . n A 1 59 ASP 59 95 95 ASP ASP A . n A 1 60 GLU 60 96 96 GLU GLU A . n A 1 61 PHE 61 97 97 PHE PHE A . n A 1 62 GLU 62 98 98 GLU GLU A . n A 1 63 LEU 63 99 99 LEU LEU A . n A 1 64 ARG 64 100 100 ARG ARG A . n A 1 65 TYR 65 101 101 TYR TYR A . n A 1 66 ARG 66 102 102 ARG ARG A . n A 1 67 ARG 67 103 103 ARG ARG A . n A 1 68 ALA 68 104 104 ALA ALA A . n A 1 69 PHE 69 105 105 PHE PHE A . n A 1 70 SER 70 106 106 SER SER A . n A 1 71 ASP 71 107 107 ASP ASP A . n A 1 72 LEU 72 108 108 LEU LEU A . n A 1 73 THR 73 109 109 THR THR A . n A 1 74 SER 74 110 110 SER SER A . n A 1 75 GLN 75 111 111 GLN GLN A . n A 1 76 LEU 76 112 112 LEU LEU A . n A 1 77 HIS 77 113 113 HIS HIS A . n A 1 78 ILE 78 114 114 ILE ILE A . n A 1 79 THR 79 115 115 THR THR A . n A 1 80 PRO 80 116 116 PRO PRO A . n A 1 81 GLY 81 117 117 GLY GLY A . n A 1 82 THR 82 118 118 THR THR A . n A 1 83 ALA 83 119 119 ALA ALA A . n A 1 84 TYR 84 120 120 TYR TYR A . n A 1 85 GLN 85 121 121 GLN GLN A . n A 1 86 SER 86 122 122 SER SER A . n A 1 87 PHE 87 123 123 PHE PHE A . n A 1 88 GLU 88 124 124 GLU GLU A . n A 1 89 GLN 89 125 125 GLN GLN A . n A 1 90 VAL 90 126 126 VAL VAL A . n A 1 91 VAL 91 127 127 VAL VAL A . n A 1 92 ASN 92 128 128 ASN ASN A . n A 1 93 GLU 93 129 129 GLU GLU A . n A 1 94 LEU 94 130 130 LEU LEU A . n A 1 95 PHE 95 131 131 PHE PHE A . n A 1 96 ARG 96 132 132 ARG ARG A . n A 1 97 ASP 97 133 133 ASP ASP A . n A 1 98 GLY 98 134 134 GLY GLY A . n A 1 99 VAL 99 135 135 VAL VAL A . n A 1 100 ASN 100 136 136 ASN ASN A . n A 1 101 TRP 101 137 137 TRP TRP A . n A 1 102 GLY 102 138 138 GLY GLY A . n A 1 103 ARG 103 139 139 ARG ARG A . n A 1 104 ILE 104 140 140 ILE ILE A . n A 1 105 VAL 105 141 141 VAL VAL A . n A 1 106 ALA 106 142 142 ALA ALA A . n A 1 107 PHE 107 143 143 PHE PHE A . n A 1 108 PHE 108 144 144 PHE PHE A . n A 1 109 SER 109 145 145 SER SER A . n A 1 110 PHE 110 146 146 PHE PHE A . n A 1 111 GLY 111 147 147 GLY GLY A . n A 1 112 GLY 112 148 148 GLY GLY A . n A 1 113 ALA 113 149 149 ALA ALA A . n A 1 114 LEU 114 150 150 LEU LEU A . n A 1 115 CYS 115 151 151 CYS CYS A . n A 1 116 VAL 116 152 152 VAL VAL A . n A 1 117 GLU 117 153 153 GLU GLU A . n A 1 118 SER 118 154 154 SER SER A . n A 1 119 VAL 119 155 155 VAL VAL A . n A 1 120 ASP 120 156 156 ASP ASP A . n A 1 121 LYS 121 157 157 LYS LYS A . n A 1 122 GLU 122 158 158 GLU GLU A . n A 1 123 MET 123 159 159 MET MET A . n A 1 124 GLN 124 160 160 GLN GLN A . n A 1 125 VAL 125 161 161 VAL VAL A . n A 1 126 LEU 126 162 162 LEU LEU A . n A 1 127 VAL 127 163 163 VAL VAL A . n A 1 128 SER 128 164 164 SER SER A . n A 1 129 ARG 129 165 165 ARG ARG A . n A 1 130 ILE 130 166 166 ILE ILE A . n A 1 131 ALA 131 167 167 ALA ALA A . n A 1 132 ALA 132 168 168 ALA ALA A . n A 1 133 TRP 133 169 169 TRP TRP A . n A 1 134 MET 134 170 170 MET MET A . n A 1 135 ALA 135 171 171 ALA ALA A . n A 1 136 THR 136 172 172 THR THR A . n A 1 137 TYR 137 173 173 TYR TYR A . n A 1 138 LEU 138 174 174 LEU LEU A . n A 1 139 ASN 139 175 175 ASN ASN A . n A 1 140 ASP 140 176 176 ASP ASP A . n A 1 141 HIS 141 177 177 HIS HIS A . n A 1 142 LEU 142 178 178 LEU LEU A . n A 1 143 GLU 143 179 179 GLU GLU A . n A 1 144 PRO 144 180 180 PRO PRO A . n A 1 145 TRP 145 181 181 TRP TRP A . n A 1 146 ILE 146 182 182 ILE ILE A . n A 1 147 GLN 147 183 183 GLN GLN A . n A 1 148 GLU 148 184 184 GLU GLU A . n A 1 149 ASN 149 185 185 ASN ASN A . n A 1 150 GLY 150 186 186 GLY GLY A . n A 1 151 GLY 151 187 187 GLY GLY A . n A 1 152 TRP 152 188 188 TRP TRP A . n A 1 153 ASP 153 189 189 ASP ASP A . n A 1 154 THR 154 190 190 THR THR A . n A 1 155 PHE 155 191 191 PHE PHE A . n A 1 156 VAL 156 192 192 VAL VAL A . n A 1 157 GLU 157 193 193 GLU GLU A . n A 1 158 LEU 158 194 194 LEU LEU A . n A 1 159 TYR 159 195 195 TYR TYR A . n A 1 160 GLY 160 196 196 GLY GLY A . n A 1 161 ASN 161 197 197 ASN ASN A . n A 1 162 ASN 162 198 ? ? ? A . n A 1 163 ALA 163 199 ? ? ? A . n A 1 164 ALA 164 200 ? ? ? A . n A 1 165 ALA 165 201 ? ? ? A . n A 1 166 GLU 166 202 ? ? ? A . n A 1 167 SER 167 203 ? ? ? A . n A 1 168 ARG 168 204 ? ? ? A . n A 1 169 LYS 169 205 ? ? ? A . n A 1 170 GLY 170 206 ? ? ? A . n A 1 171 GLN 171 207 ? ? ? A . n A 1 172 GLU 172 208 ? ? ? A . n A 1 173 ARG 173 209 ? ? ? A . n A 1 174 LEU 174 210 ? ? ? A . n A 1 175 GLU 175 211 ? ? ? A . n A 1 176 HIS 176 212 ? ? ? A . n A 1 177 HIS 177 213 ? ? ? A . n A 1 178 HIS 178 214 ? ? ? A . n A 1 179 HIS 179 215 ? ? ? A . n A 1 180 HIS 180 216 ? ? ? A . n A 1 181 HIS 181 217 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 X8U 1 1198 1198 X8U X8U A . C 3 HOH 1 2001 2001 HOH HOH A . C 3 HOH 2 2002 2002 HOH HOH A . C 3 HOH 3 2003 2003 HOH HOH A . C 3 HOH 4 2004 2004 HOH HOH A . C 3 HOH 5 2005 2005 HOH HOH A . C 3 HOH 6 2006 2006 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2013-04-24 2 'Structure model' 1 1 2013-05-08 3 'Structure model' 1 2 2013-06-05 4 'Structure model' 1 3 2018-06-13 5 'Structure model' 1 4 2023-12-20 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Structure summary' 6 5 'Structure model' 'Data collection' 7 5 'Structure model' 'Database references' 8 5 'Structure model' 'Derived calculations' 9 5 'Structure model' Other 10 5 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' citation 2 4 'Structure model' struct 3 5 'Structure model' chem_comp_atom 4 5 'Structure model' chem_comp_bond 5 5 'Structure model' database_2 6 5 'Structure model' pdbx_database_status 7 5 'Structure model' pdbx_initial_refinement_model 8 5 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_citation.page_last' 2 4 'Structure model' '_struct.title' 3 5 'Structure model' '_database_2.pdbx_DOI' 4 5 'Structure model' '_database_2.pdbx_database_accession' 5 5 'Structure model' '_pdbx_database_status.status_code_sf' 6 5 'Structure model' '_struct_site.pdbx_auth_asym_id' 7 5 'Structure model' '_struct_site.pdbx_auth_comp_id' 8 5 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] 'X-RAY DIFFRACTION' 1 ? refined 24.3098 -17.9980 10.2882 0.5798 0.6867 0.8034 -0.2062 0.1348 0.0488 4.5959 7.1377 8.2921 -1.8656 0.4301 2.4998 0.4600 0.4506 0.5760 -0.4690 -0.0115 -0.3450 -2.8294 1.1550 -0.5120 'X-RAY DIFFRACTION' 2 ? refined 30.0062 -17.9848 17.8025 0.6871 1.3133 0.7828 -0.3736 -0.0926 -0.2868 2.9739 2.5578 4.0768 -2.2725 -3.2247 1.7197 -0.2396 -0.7391 1.1532 0.5114 0.1119 0.1042 0.4822 1.9492 0.0583 'X-RAY DIFFRACTION' 3 ? refined 14.4693 -19.3449 14.0264 0.6614 0.7318 0.6410 0.0944 0.1333 0.0562 3.8586 3.8372 4.0828 3.8601 -3.9833 -3.9471 0.7302 0.1718 0.3180 0.5840 0.2106 0.6081 -0.8885 -0.8075 -0.5536 'X-RAY DIFFRACTION' 4 ? refined 18.0004 -36.6832 14.0215 1.0021 0.8588 0.8997 -0.0358 0.1138 0.1955 4.1780 8.8352 3.8514 -5.8020 0.6779 0.5875 -1.6024 -0.4176 -0.8457 0.6249 1.0127 0.0889 1.8955 -0.5696 0.6231 'X-RAY DIFFRACTION' 5 ? refined 26.3342 -30.2301 6.6523 0.5028 0.7416 0.4296 0.0261 0.0531 -0.0016 9.2307 6.8934 6.8618 0.9945 -2.1818 -0.6738 0.2166 0.7933 -0.3833 -0.6174 -0.0737 -0.2871 1.4029 0.6151 -0.0843 'X-RAY DIFFRACTION' 6 ? refined 14.2270 -21.7159 -4.4669 0.6727 1.7329 1.0129 0.1713 -0.0966 0.5354 4.6342 7.3531 5.2846 0.5518 4.1423 -2.1784 -0.3633 3.4807 1.4744 -1.2517 0.0495 0.8141 -1.2525 -0.8553 0.4798 'X-RAY DIFFRACTION' 7 ? refined 9.2178 -16.8259 4.7468 0.3781 1.6700 1.2530 0.3878 -0.0843 0.7281 1.8796 0.7328 0.9977 0.0903 0.1019 0.8559 0.0264 -0.0752 -0.2305 0.4427 0.7520 0.6079 -0.3658 -1.4436 1.5520 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 'X-RAY DIFFRACTION' 1 1 ? ? ? ? ? ? ? ? ? 'CHAIN A AND (RESSEQ 2:19)' 'X-RAY DIFFRACTION' 2 2 ? ? ? ? ? ? ? ? ? 'CHAIN A AND (RESSEQ 20:81)' 'X-RAY DIFFRACTION' 3 3 ? ? ? ? ? ? ? ? ? 'CHAIN A AND (RESSEQ 82:100)' 'X-RAY DIFFRACTION' 4 4 ? ? ? ? ? ? ? ? ? 'CHAIN A AND (RESSEQ 101:111)' 'X-RAY DIFFRACTION' 5 5 ? ? ? ? ? ? ? ? ? 'CHAIN A AND (RESSEQ 112:177)' 'X-RAY DIFFRACTION' 6 6 ? ? ? ? ? ? ? ? ? 'CHAIN A AND (RESSEQ 178:186)' 'X-RAY DIFFRACTION' 7 7 ? ? ? ? ? ? ? ? ? 'CHAIN A AND (RESSEQ 187:196)' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal _software.date _software.type _software.location _software.language PHENIX refinement '(PHENIX.REFINE: 1.8.1_1168)' ? 1 ? ? ? ? DENZO 'data reduction' . ? 2 ? ? ? ? SCALEPACK 'data scaling' . ? 3 ? ? ? ? PHASER phasing . ? 4 ? ? ? ? # _pdbx_entry_details.entry_id 3ZLO _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details 'RESIDUES 45 TO 84 REMOVED, LAST 25 RESIDUES TRUNCATED' _pdbx_entry_details.has_ligand_of_interest ? # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 25 ? ? -49.67 85.16 2 1 ARG A 102 ? ? -28.19 -44.42 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A GLU 42 ? CG ? A GLU 46 CG 2 1 Y 1 A GLU 42 ? CD ? A GLU 46 CD 3 1 Y 1 A GLU 42 ? OE1 ? A GLU 46 OE1 4 1 Y 1 A GLU 42 ? OE2 ? A GLU 46 OE2 5 1 Y 1 A ASN 197 ? CA ? A ASN 161 CA 6 1 Y 1 A ASN 197 ? C ? A ASN 161 C 7 1 Y 1 A ASN 197 ? O ? A ASN 161 O 8 1 Y 1 A ASN 197 ? CB ? A ASN 161 CB 9 1 Y 1 A ASN 197 ? CG ? A ASN 161 CG 10 1 Y 1 A ASN 197 ? OD1 ? A ASN 161 OD1 11 1 Y 1 A ASN 197 ? ND2 ? A ASN 161 ND2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET -3 ? A MET 1 2 1 Y 1 A SER -2 ? A SER 2 3 1 Y 1 A MET -1 ? A MET 3 4 1 Y 1 A ALA 0 ? A ALA 4 5 1 Y 1 A MET 1 ? A MET 5 6 1 Y 1 A PHE 27 ? A PHE 31 7 1 Y 1 A SER 28 ? A SER 32 8 1 Y 1 A ASP 29 ? A ASP 33 9 1 Y 1 A VAL 30 ? A VAL 34 10 1 Y 1 A GLU 31 ? A GLU 35 11 1 Y 1 A GLU 32 ? A GLU 36 12 1 Y 1 A ASN 33 ? A ASN 37 13 1 Y 1 A ARG 34 ? A ARG 38 14 1 Y 1 A THR 35 ? A THR 39 15 1 Y 1 A GLU 36 ? A GLU 40 16 1 Y 1 A ALA 37 ? A ALA 41 17 1 Y 1 A PRO 38 ? A PRO 42 18 1 Y 1 A GLU 39 ? A GLU 43 19 1 Y 1 A GLY 40 ? A GLY 44 20 1 Y 1 A ASN 198 ? A ASN 162 21 1 Y 1 A ALA 199 ? A ALA 163 22 1 Y 1 A ALA 200 ? A ALA 164 23 1 Y 1 A ALA 201 ? A ALA 165 24 1 Y 1 A GLU 202 ? A GLU 166 25 1 Y 1 A SER 203 ? A SER 167 26 1 Y 1 A ARG 204 ? A ARG 168 27 1 Y 1 A LYS 205 ? A LYS 169 28 1 Y 1 A GLY 206 ? A GLY 170 29 1 Y 1 A GLN 207 ? A GLN 171 30 1 Y 1 A GLU 208 ? A GLU 172 31 1 Y 1 A ARG 209 ? A ARG 173 32 1 Y 1 A LEU 210 ? A LEU 174 33 1 Y 1 A GLU 211 ? A GLU 175 34 1 Y 1 A HIS 212 ? A HIS 176 35 1 Y 1 A HIS 213 ? A HIS 177 36 1 Y 1 A HIS 214 ? A HIS 178 37 1 Y 1 A HIS 215 ? A HIS 179 38 1 Y 1 A HIS 216 ? A HIS 180 39 1 Y 1 A HIS 217 ? A HIS 181 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HIS N N N N 137 HIS CA C N S 138 HIS C C N N 139 HIS O O N N 140 HIS CB C N N 141 HIS CG C Y N 142 HIS ND1 N Y N 143 HIS CD2 C Y N 144 HIS CE1 C Y N 145 HIS NE2 N Y N 146 HIS OXT O N N 147 HIS H H N N 148 HIS H2 H N N 149 HIS HA H N N 150 HIS HB2 H N N 151 HIS HB3 H N N 152 HIS HD1 H N N 153 HIS HD2 H N N 154 HIS HE1 H N N 155 HIS HE2 H N N 156 HIS HXT H N N 157 HOH O O N N 158 HOH H1 H N N 159 HOH H2 H N N 160 ILE N N N N 161 ILE CA C N S 162 ILE C C N N 163 ILE O O N N 164 ILE CB C N S 165 ILE CG1 C N N 166 ILE CG2 C N N 167 ILE CD1 C N N 168 ILE OXT O N N 169 ILE H H N N 170 ILE H2 H N N 171 ILE HA H N N 172 ILE HB H N N 173 ILE HG12 H N N 174 ILE HG13 H N N 175 ILE HG21 H N N 176 ILE HG22 H N N 177 ILE HG23 H N N 178 ILE HD11 H N N 179 ILE HD12 H N N 180 ILE HD13 H N N 181 ILE HXT H N N 182 LEU N N N N 183 LEU CA C N S 184 LEU C C N N 185 LEU O O N N 186 LEU CB C N N 187 LEU CG C N N 188 LEU CD1 C N N 189 LEU CD2 C N N 190 LEU OXT O N N 191 LEU H H N N 192 LEU H2 H N N 193 LEU HA H N N 194 LEU HB2 H N N 195 LEU HB3 H N N 196 LEU HG H N N 197 LEU HD11 H N N 198 LEU HD12 H N N 199 LEU HD13 H N N 200 LEU HD21 H N N 201 LEU HD22 H N N 202 LEU HD23 H N N 203 LEU HXT H N N 204 LYS N N N N 205 LYS CA C N S 206 LYS C C N N 207 LYS O O N N 208 LYS CB C N N 209 LYS CG C N N 210 LYS CD C N N 211 LYS CE C N N 212 LYS NZ N N N 213 LYS OXT O N N 214 LYS H H N N 215 LYS H2 H N N 216 LYS HA H N N 217 LYS HB2 H N N 218 LYS HB3 H N N 219 LYS HG2 H N N 220 LYS HG3 H N N 221 LYS HD2 H N N 222 LYS HD3 H N N 223 LYS HE2 H N N 224 LYS HE3 H N N 225 LYS HZ1 H N N 226 LYS HZ2 H N N 227 LYS HZ3 H N N 228 LYS HXT H N N 229 MET N N N N 230 MET CA C N S 231 MET C C N N 232 MET O O N N 233 MET CB C N N 234 MET CG C N N 235 MET SD S N N 236 MET CE C N N 237 MET OXT O N N 238 MET H H N N 239 MET H2 H N N 240 MET HA H N N 241 MET HB2 H N N 242 MET HB3 H N N 243 MET HG2 H N N 244 MET HG3 H N N 245 MET HE1 H N N 246 MET HE2 H N N 247 MET HE3 H N N 248 MET HXT H N N 249 PHE N N N N 250 PHE CA C N S 251 PHE C C N N 252 PHE O O N N 253 PHE CB C N N 254 PHE CG C Y N 255 PHE CD1 C Y N 256 PHE CD2 C Y N 257 PHE CE1 C Y N 258 PHE CE2 C Y N 259 PHE CZ C Y N 260 PHE OXT O N N 261 PHE H H N N 262 PHE H2 H N N 263 PHE HA H N N 264 PHE HB2 H N N 265 PHE HB3 H N N 266 PHE HD1 H N N 267 PHE HD2 H N N 268 PHE HE1 H N N 269 PHE HE2 H N N 270 PHE HZ H N N 271 PHE HXT H N N 272 PRO N N N N 273 PRO CA C N S 274 PRO C C N N 275 PRO O O N N 276 PRO CB C N N 277 PRO CG C N N 278 PRO CD C N N 279 PRO OXT O N N 280 PRO H H N N 281 PRO HA H N N 282 PRO HB2 H N N 283 PRO HB3 H N N 284 PRO HG2 H N N 285 PRO HG3 H N N 286 PRO HD2 H N N 287 PRO HD3 H N N 288 PRO HXT H N N 289 SER N N N N 290 SER CA C N S 291 SER C C N N 292 SER O O N N 293 SER CB C N N 294 SER OG O N N 295 SER OXT O N N 296 SER H H N N 297 SER H2 H N N 298 SER HA H N N 299 SER HB2 H N N 300 SER HB3 H N N 301 SER HG H N N 302 SER HXT H N N 303 THR N N N N 304 THR CA C N S 305 THR C C N N 306 THR O O N N 307 THR CB C N R 308 THR OG1 O N N 309 THR CG2 C N N 310 THR OXT O N N 311 THR H H N N 312 THR H2 H N N 313 THR HA H N N 314 THR HB H N N 315 THR HG1 H N N 316 THR HG21 H N N 317 THR HG22 H N N 318 THR HG23 H N N 319 THR HXT H N N 320 TRP N N N N 321 TRP CA C N S 322 TRP C C N N 323 TRP O O N N 324 TRP CB C N N 325 TRP CG C Y N 326 TRP CD1 C Y N 327 TRP CD2 C Y N 328 TRP NE1 N Y N 329 TRP CE2 C Y N 330 TRP CE3 C Y N 331 TRP CZ2 C Y N 332 TRP CZ3 C Y N 333 TRP CH2 C Y N 334 TRP OXT O N N 335 TRP H H N N 336 TRP H2 H N N 337 TRP HA H N N 338 TRP HB2 H N N 339 TRP HB3 H N N 340 TRP HD1 H N N 341 TRP HE1 H N N 342 TRP HE3 H N N 343 TRP HZ2 H N N 344 TRP HZ3 H N N 345 TRP HH2 H N N 346 TRP HXT H N N 347 TYR N N N N 348 TYR CA C N S 349 TYR C C N N 350 TYR O O N N 351 TYR CB C N N 352 TYR CG C Y N 353 TYR CD1 C Y N 354 TYR CD2 C Y N 355 TYR CE1 C Y N 356 TYR CE2 C Y N 357 TYR CZ C Y N 358 TYR OH O N N 359 TYR OXT O N N 360 TYR H H N N 361 TYR H2 H N N 362 TYR HA H N N 363 TYR HB2 H N N 364 TYR HB3 H N N 365 TYR HD1 H N N 366 TYR HD2 H N N 367 TYR HE1 H N N 368 TYR HE2 H N N 369 TYR HH H N N 370 TYR HXT H N N 371 VAL N N N N 372 VAL CA C N S 373 VAL C C N N 374 VAL O O N N 375 VAL CB C N N 376 VAL CG1 C N N 377 VAL CG2 C N N 378 VAL OXT O N N 379 VAL H H N N 380 VAL H2 H N N 381 VAL HA H N N 382 VAL HB H N N 383 VAL HG11 H N N 384 VAL HG12 H N N 385 VAL HG13 H N N 386 VAL HG21 H N N 387 VAL HG22 H N N 388 VAL HG23 H N N 389 VAL HXT H N N 390 X8U O2 O N N 391 X8U C20 C N N 392 X8U O1 O N N 393 X8U C19 C Y N 394 X8U N4 N Y N 395 X8U C21 C Y N 396 X8U C22 C N N 397 X8U C23 C N N 398 X8U C24 C N N 399 X8U C25 C N N 400 X8U C26 C Y N 401 X8U C31 C Y N 402 X8U C30 C Y N 403 X8U C29 C Y N 404 X8U C28 C Y N 405 X8U C27 C Y N 406 X8U S2 S Y N 407 X8U C18 C Y N 408 X8U C15 C Y N 409 X8U C16 C Y N 410 X8U C17 C Y N 411 X8U C12 C Y N 412 X8U C11 C N N 413 X8U C10 C N N 414 X8U C9 C N N 415 X8U C14 C Y N 416 X8U C13 C Y N 417 X8U C8 C N N 418 X8U N3 N N N 419 X8U N2 N N N 420 X8U C7 C Y N 421 X8U S1 S Y N 422 X8U C4 C Y N 423 X8U C3 C Y N 424 X8U C2 C Y N 425 X8U N1 N Y N 426 X8U C5 C Y N 427 X8U C6 C Y N 428 X8U C1 C Y N 429 X8U H2 H N N 430 X8U H221 H N N 431 X8U H222 H N N 432 X8U H231 H N N 433 X8U H232 H N N 434 X8U H241 H N N 435 X8U H242 H N N 436 X8U H251 H N N 437 X8U H252 H N N 438 X8U H31 H N N 439 X8U H27 H N N 440 X8U H30 H N N 441 X8U H29 H N N 442 X8U H28 H N N 443 X8U H16 H N N 444 X8U H14 H N N 445 X8U H17 H N N 446 X8U H111 H N N 447 X8U H112 H N N 448 X8U H101 H N N 449 X8U H102 H N N 450 X8U H91C H N N 451 X8U H92C H N N 452 X8U HA H N N 453 X8U H3 H N N 454 X8U HB H N N 455 X8U H1 H N N 456 X8U H6 H N N 457 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 HOH O H1 sing N N 150 HOH O H2 sing N N 151 ILE N CA sing N N 152 ILE N H sing N N 153 ILE N H2 sing N N 154 ILE CA C sing N N 155 ILE CA CB sing N N 156 ILE CA HA sing N N 157 ILE C O doub N N 158 ILE C OXT sing N N 159 ILE CB CG1 sing N N 160 ILE CB CG2 sing N N 161 ILE CB HB sing N N 162 ILE CG1 CD1 sing N N 163 ILE CG1 HG12 sing N N 164 ILE CG1 HG13 sing N N 165 ILE CG2 HG21 sing N N 166 ILE CG2 HG22 sing N N 167 ILE CG2 HG23 sing N N 168 ILE CD1 HD11 sing N N 169 ILE CD1 HD12 sing N N 170 ILE CD1 HD13 sing N N 171 ILE OXT HXT sing N N 172 LEU N CA sing N N 173 LEU N H sing N N 174 LEU N H2 sing N N 175 LEU CA C sing N N 176 LEU CA CB sing N N 177 LEU CA HA sing N N 178 LEU C O doub N N 179 LEU C OXT sing N N 180 LEU CB CG sing N N 181 LEU CB HB2 sing N N 182 LEU CB HB3 sing N N 183 LEU CG CD1 sing N N 184 LEU CG CD2 sing N N 185 LEU CG HG sing N N 186 LEU CD1 HD11 sing N N 187 LEU CD1 HD12 sing N N 188 LEU CD1 HD13 sing N N 189 LEU CD2 HD21 sing N N 190 LEU CD2 HD22 sing N N 191 LEU CD2 HD23 sing N N 192 LEU OXT HXT sing N N 193 LYS N CA sing N N 194 LYS N H sing N N 195 LYS N H2 sing N N 196 LYS CA C sing N N 197 LYS CA CB sing N N 198 LYS CA HA sing N N 199 LYS C O doub N N 200 LYS C OXT sing N N 201 LYS CB CG sing N N 202 LYS CB HB2 sing N N 203 LYS CB HB3 sing N N 204 LYS CG CD sing N N 205 LYS CG HG2 sing N N 206 LYS CG HG3 sing N N 207 LYS CD CE sing N N 208 LYS CD HD2 sing N N 209 LYS CD HD3 sing N N 210 LYS CE NZ sing N N 211 LYS CE HE2 sing N N 212 LYS CE HE3 sing N N 213 LYS NZ HZ1 sing N N 214 LYS NZ HZ2 sing N N 215 LYS NZ HZ3 sing N N 216 LYS OXT HXT sing N N 217 MET N CA sing N N 218 MET N H sing N N 219 MET N H2 sing N N 220 MET CA C sing N N 221 MET CA CB sing N N 222 MET CA HA sing N N 223 MET C O doub N N 224 MET C OXT sing N N 225 MET CB CG sing N N 226 MET CB HB2 sing N N 227 MET CB HB3 sing N N 228 MET CG SD sing N N 229 MET CG HG2 sing N N 230 MET CG HG3 sing N N 231 MET SD CE sing N N 232 MET CE HE1 sing N N 233 MET CE HE2 sing N N 234 MET CE HE3 sing N N 235 MET OXT HXT sing N N 236 PHE N CA sing N N 237 PHE N H sing N N 238 PHE N H2 sing N N 239 PHE CA C sing N N 240 PHE CA CB sing N N 241 PHE CA HA sing N N 242 PHE C O doub N N 243 PHE C OXT sing N N 244 PHE CB CG sing N N 245 PHE CB HB2 sing N N 246 PHE CB HB3 sing N N 247 PHE CG CD1 doub Y N 248 PHE CG CD2 sing Y N 249 PHE CD1 CE1 sing Y N 250 PHE CD1 HD1 sing N N 251 PHE CD2 CE2 doub Y N 252 PHE CD2 HD2 sing N N 253 PHE CE1 CZ doub Y N 254 PHE CE1 HE1 sing N N 255 PHE CE2 CZ sing Y N 256 PHE CE2 HE2 sing N N 257 PHE CZ HZ sing N N 258 PHE OXT HXT sing N N 259 PRO N CA sing N N 260 PRO N CD sing N N 261 PRO N H sing N N 262 PRO CA C sing N N 263 PRO CA CB sing N N 264 PRO CA HA sing N N 265 PRO C O doub N N 266 PRO C OXT sing N N 267 PRO CB CG sing N N 268 PRO CB HB2 sing N N 269 PRO CB HB3 sing N N 270 PRO CG CD sing N N 271 PRO CG HG2 sing N N 272 PRO CG HG3 sing N N 273 PRO CD HD2 sing N N 274 PRO CD HD3 sing N N 275 PRO OXT HXT sing N N 276 SER N CA sing N N 277 SER N H sing N N 278 SER N H2 sing N N 279 SER CA C sing N N 280 SER CA CB sing N N 281 SER CA HA sing N N 282 SER C O doub N N 283 SER C OXT sing N N 284 SER CB OG sing N N 285 SER CB HB2 sing N N 286 SER CB HB3 sing N N 287 SER OG HG sing N N 288 SER OXT HXT sing N N 289 THR N CA sing N N 290 THR N H sing N N 291 THR N H2 sing N N 292 THR CA C sing N N 293 THR CA CB sing N N 294 THR CA HA sing N N 295 THR C O doub N N 296 THR C OXT sing N N 297 THR CB OG1 sing N N 298 THR CB CG2 sing N N 299 THR CB HB sing N N 300 THR OG1 HG1 sing N N 301 THR CG2 HG21 sing N N 302 THR CG2 HG22 sing N N 303 THR CG2 HG23 sing N N 304 THR OXT HXT sing N N 305 TRP N CA sing N N 306 TRP N H sing N N 307 TRP N H2 sing N N 308 TRP CA C sing N N 309 TRP CA CB sing N N 310 TRP CA HA sing N N 311 TRP C O doub N N 312 TRP C OXT sing N N 313 TRP CB CG sing N N 314 TRP CB HB2 sing N N 315 TRP CB HB3 sing N N 316 TRP CG CD1 doub Y N 317 TRP CG CD2 sing Y N 318 TRP CD1 NE1 sing Y N 319 TRP CD1 HD1 sing N N 320 TRP CD2 CE2 doub Y N 321 TRP CD2 CE3 sing Y N 322 TRP NE1 CE2 sing Y N 323 TRP NE1 HE1 sing N N 324 TRP CE2 CZ2 sing Y N 325 TRP CE3 CZ3 doub Y N 326 TRP CE3 HE3 sing N N 327 TRP CZ2 CH2 doub Y N 328 TRP CZ2 HZ2 sing N N 329 TRP CZ3 CH2 sing Y N 330 TRP CZ3 HZ3 sing N N 331 TRP CH2 HH2 sing N N 332 TRP OXT HXT sing N N 333 TYR N CA sing N N 334 TYR N H sing N N 335 TYR N H2 sing N N 336 TYR CA C sing N N 337 TYR CA CB sing N N 338 TYR CA HA sing N N 339 TYR C O doub N N 340 TYR C OXT sing N N 341 TYR CB CG sing N N 342 TYR CB HB2 sing N N 343 TYR CB HB3 sing N N 344 TYR CG CD1 doub Y N 345 TYR CG CD2 sing Y N 346 TYR CD1 CE1 sing Y N 347 TYR CD1 HD1 sing N N 348 TYR CD2 CE2 doub Y N 349 TYR CD2 HD2 sing N N 350 TYR CE1 CZ doub Y N 351 TYR CE1 HE1 sing N N 352 TYR CE2 CZ sing Y N 353 TYR CE2 HE2 sing N N 354 TYR CZ OH sing N N 355 TYR OH HH sing N N 356 TYR OXT HXT sing N N 357 VAL N CA sing N N 358 VAL N H sing N N 359 VAL N H2 sing N N 360 VAL CA C sing N N 361 VAL CA CB sing N N 362 VAL CA HA sing N N 363 VAL C O doub N N 364 VAL C OXT sing N N 365 VAL CB CG1 sing N N 366 VAL CB CG2 sing N N 367 VAL CB HB sing N N 368 VAL CG1 HG11 sing N N 369 VAL CG1 HG12 sing N N 370 VAL CG1 HG13 sing N N 371 VAL CG2 HG21 sing N N 372 VAL CG2 HG22 sing N N 373 VAL CG2 HG23 sing N N 374 VAL OXT HXT sing N N 375 X8U O2 C20 sing N N 376 X8U C20 O1 doub N N 377 X8U C20 C19 sing N N 378 X8U C19 N4 sing Y N 379 X8U C19 C21 doub Y N 380 X8U N4 C18 doub Y N 381 X8U C21 C22 sing N N 382 X8U C21 S2 sing Y N 383 X8U C22 C23 sing N N 384 X8U C23 C24 sing N N 385 X8U C24 C25 sing N N 386 X8U C25 C26 sing N N 387 X8U C26 C31 sing Y N 388 X8U C26 C27 doub Y N 389 X8U C31 C30 doub Y N 390 X8U C30 C29 sing Y N 391 X8U C29 C28 doub Y N 392 X8U C28 C27 sing Y N 393 X8U S2 C18 sing Y N 394 X8U C18 C15 sing N N 395 X8U C15 C16 sing Y N 396 X8U C15 C14 doub Y N 397 X8U C16 C17 doub Y N 398 X8U C17 C12 sing Y N 399 X8U C12 C11 sing N N 400 X8U C12 C13 doub Y N 401 X8U C11 C10 sing N N 402 X8U C10 C9 sing N N 403 X8U C9 C8 sing N N 404 X8U C14 C13 sing Y N 405 X8U C13 C8 sing N N 406 X8U C8 N3 doub N E 407 X8U N3 N2 sing N N 408 X8U N2 C7 sing N N 409 X8U C7 S1 sing Y N 410 X8U C7 N1 doub Y N 411 X8U S1 C4 sing Y N 412 X8U C4 C3 sing Y N 413 X8U C4 C5 doub Y N 414 X8U C3 C2 doub Y N 415 X8U C2 C1 sing Y N 416 X8U N1 C5 sing Y N 417 X8U C5 C6 sing Y N 418 X8U C6 C1 doub Y N 419 X8U O2 H2 sing N N 420 X8U C22 H221 sing N N 421 X8U C22 H222 sing N N 422 X8U C23 H231 sing N N 423 X8U C23 H232 sing N N 424 X8U C24 H241 sing N N 425 X8U C24 H242 sing N N 426 X8U C25 H251 sing N N 427 X8U C25 H252 sing N N 428 X8U C31 H31 sing N N 429 X8U C27 H27 sing N N 430 X8U C30 H30 sing N N 431 X8U C29 H29 sing N N 432 X8U C28 H28 sing N N 433 X8U C16 H16 sing N N 434 X8U C14 H14 sing N N 435 X8U C17 H17 sing N N 436 X8U C11 H111 sing N N 437 X8U C11 H112 sing N N 438 X8U C10 H101 sing N N 439 X8U C10 H102 sing N N 440 X8U C9 H91C sing N N 441 X8U C9 H92C sing N N 442 X8U N2 HA sing N N 443 X8U C3 H3 sing N N 444 X8U C2 HB sing N N 445 X8U C1 H1 sing N N 446 X8U C6 H6 sing N N 447 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 '2-[(8E)-8-(1,3-benzothiazol-2-ylhydrazinylidene)-6,7-dihydro-5H-naphthalen-2-yl]-5-(4-phenylbutyl)-1,3-thiazole-4-carboxylic acid' X8U 3 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 3ZK6 _pdbx_initial_refinement_model.details 'PDB ENTRY 3ZK6 CHAIN A' #