HEADER HYDROLASE/PEPTIDE 12-FEB-13 3ZMQ TITLE SRC-DERIVED MUTANT PEPTIDE INHIBITOR COMPLEX OF PTP1B COMPND MOL_ID: 1; COMPND 2 MOLECULE: TYROSINE-PROTEIN PHOSPHATASE NON-RECEPTOR TYPE 1; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: TYROSINE-PROTEIN PHOSPHATASE DOMAIN, RESIDUES 1-321; COMPND 5 SYNONYM: PROTEIN-TYROSINE PHOSPHATASE 1B, PTP-1B; COMPND 6 EC: 3.1.3.48; COMPND 7 ENGINEERED: YES; COMPND 8 MUTATION: YES; COMPND 9 MOL_ID: 2; COMPND 10 MOLECULE: PROTO-ONCOGENE TYROSINE-PROTEIN KINASE SRC; COMPND 11 CHAIN: C; COMPND 12 FRAGMENT: PROTO-ONCOGENE TYROSINE-PROTEIN KINASE SRC RESIDUES 527- COMPND 13 536; COMPND 14 SYNONYM: PROTO-ONCOGENE C-SRC, PP60C-SRC, P60-SRC; COMPND 15 EC: 2.7.10.2; COMPND 16 ENGINEERED: YES; COMPND 17 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 MOL_ID: 2; SOURCE 8 SYNTHETIC: YES; SOURCE 9 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 10 ORGANISM_COMMON: HUMAN; SOURCE 11 ORGANISM_TAXID: 9606 KEYWDS HYDROLASE-PEPTIDE COMPLEX, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR K.TEMMERMAN,V.POGENBERG,C.MEYER,M.KOEHN,M.WILMANNS REVDAT 4 13-NOV-24 3ZMQ 1 REMARK REVDAT 3 20-DEC-23 3ZMQ 1 LINK REVDAT 2 02-APR-14 3ZMQ 1 JRNL REVDAT 1 22-JAN-14 3ZMQ 0 JRNL AUTH C.MEYER,B.HOEGER,K.TEMMERMAN,M.TATAREK-NOSSOL,V.POGENBERG, JRNL AUTH 2 J.BERNHAGEN,M.WILMANNS,A.KAPURNIOTU,M.KOHN JRNL TITL DEVELOPMENT OF ACCESSIBLE PEPTIDIC TOOL COMPOUNDS TO STUDY JRNL TITL 2 THE PHOSPHATASE PTP1B IN INTACT CELLS. JRNL REF ACS CHEM.BIOL. V. 9 769 2014 JRNL REFN ISSN 1554-8929 JRNL PMID 24387659 JRNL DOI 10.1021/CB400903U REMARK 2 REMARK 2 RESOLUTION. 3.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : LS_WUNIT_K1 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.27 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 5342 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.250 REMARK 3 R VALUE (WORKING SET) : 0.248 REMARK 3 FREE R VALUE : 0.304 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.500 REMARK 3 FREE R VALUE TEST SET COUNT : 242 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 50.2768 - 4.1577 1.00 2596 123 0.2372 0.2836 REMARK 3 2 4.1577 - 3.3003 1.00 2504 119 0.2621 0.3338 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.390 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 29.400 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 44.62 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 57.20 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.010 1986 REMARK 3 ANGLE : 1.418 2716 REMARK 3 CHIRALITY : 0.081 310 REMARK 3 PLANARITY : 0.013 347 REMARK 3 DIHEDRAL : 18.763 670 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 8 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN A AND (RESID 7 THROUGH 32 ) REMARK 3 ORIGIN FOR THE GROUP (A): -4.8021 16.5222 -0.8588 REMARK 3 T TENSOR REMARK 3 T11: 0.5235 T22: 0.5822 REMARK 3 T33: 0.4099 T12: -0.0933 REMARK 3 T13: -0.1039 T23: -0.1101 REMARK 3 L TENSOR REMARK 3 L11: 2.0655 L22: 2.1142 REMARK 3 L33: 3.0050 L12: 1.0498 REMARK 3 L13: 0.8122 L23: -0.5313 REMARK 3 S TENSOR REMARK 3 S11: 0.1163 S12: -0.6014 S13: 0.5392 REMARK 3 S21: 0.2078 S22: -0.2309 S23: -1.0384 REMARK 3 S31: -0.0881 S32: 0.2092 S33: 0.2587 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN A AND (RESID 33 THROUGH 63 ) REMARK 3 ORIGIN FOR THE GROUP (A): -7.0354 -7.3705 -9.8426 REMARK 3 T TENSOR REMARK 3 T11: 0.6523 T22: 0.3882 REMARK 3 T33: 0.4135 T12: 0.0772 REMARK 3 T13: 0.0705 T23: 0.0488 REMARK 3 L TENSOR REMARK 3 L11: 3.1344 L22: 3.5346 REMARK 3 L33: 4.2078 L12: -0.0932 REMARK 3 L13: 0.5165 L23: -0.6708 REMARK 3 S TENSOR REMARK 3 S11: -0.2163 S12: -0.2900 S13: -0.5055 REMARK 3 S21: 0.4377 S22: 0.0872 S23: -0.1056 REMARK 3 S31: 0.4254 S32: -0.0296 S33: -0.0737 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN A AND (RESID 64 THROUGH 90 ) REMARK 3 ORIGIN FOR THE GROUP (A): -14.0852 0.4996 -13.1041 REMARK 3 T TENSOR REMARK 3 T11: 0.3197 T22: 0.4137 REMARK 3 T33: 0.3450 T12: 0.0517 REMARK 3 T13: 0.0256 T23: -0.0179 REMARK 3 L TENSOR REMARK 3 L11: 2.8626 L22: 3.0271 REMARK 3 L33: 3.4013 L12: 0.4427 REMARK 3 L13: 0.8580 L23: -0.3382 REMARK 3 S TENSOR REMARK 3 S11: -0.2014 S12: 0.0662 S13: 0.0456 REMARK 3 S21: -0.8629 S22: -0.0641 S23: -0.2972 REMARK 3 S31: 0.0249 S32: -0.5400 S33: -0.0348 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN A AND (RESID 91 THROUGH 162 ) REMARK 3 ORIGIN FOR THE GROUP (A): -13.5722 -1.0490 -28.8903 REMARK 3 T TENSOR REMARK 3 T11: 0.7112 T22: 0.4127 REMARK 3 T33: 0.3797 T12: 0.0025 REMARK 3 T13: 0.0391 T23: -0.0001 REMARK 3 L TENSOR REMARK 3 L11: 2.2871 L22: 1.1285 REMARK 3 L33: 3.3516 L12: 0.3737 REMARK 3 L13: 0.8482 L23: 0.1036 REMARK 3 S TENSOR REMARK 3 S11: -0.0663 S12: 0.3633 S13: -0.3492 REMARK 3 S21: -1.0721 S22: 0.0381 S23: -0.2400 REMARK 3 S31: 0.5751 S32: 0.3883 S33: -0.0289 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN A AND (RESID 163 THROUGH 201 ) REMARK 3 ORIGIN FOR THE GROUP (A): -13.5125 10.6068 -24.1995 REMARK 3 T TENSOR REMARK 3 T11: 0.3567 T22: 0.3205 REMARK 3 T33: 0.2569 T12: -0.0101 REMARK 3 T13: 0.0659 T23: -0.0030 REMARK 3 L TENSOR REMARK 3 L11: 2.6192 L22: 3.5679 REMARK 3 L33: 3.6485 L12: 0.6738 REMARK 3 L13: 0.9595 L23: -0.0049 REMARK 3 S TENSOR REMARK 3 S11: 0.0588 S12: -0.1686 S13: 0.1155 REMARK 3 S21: -0.5984 S22: -0.2782 S23: -0.0864 REMARK 3 S31: 0.1178 S32: 0.1109 S33: 0.0924 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN A AND (RESID 202 THROUGH 255 ) REMARK 3 ORIGIN FOR THE GROUP (A): -16.6596 12.6517 -11.5362 REMARK 3 T TENSOR REMARK 3 T11: 0.3906 T22: 0.4049 REMARK 3 T33: 0.2862 T12: 0.0835 REMARK 3 T13: 0.0723 T23: -0.0483 REMARK 3 L TENSOR REMARK 3 L11: 2.4957 L22: 2.7040 REMARK 3 L33: 2.9029 L12: 0.5854 REMARK 3 L13: 1.0178 L23: -0.5846 REMARK 3 S TENSOR REMARK 3 S11: 0.1114 S12: -0.3018 S13: 0.5758 REMARK 3 S21: 0.0192 S22: -0.2059 S23: 0.0802 REMARK 3 S31: -0.2839 S32: -0.5716 S33: 0.1195 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN A AND (RESID 256 THROUGH 279 ) REMARK 3 ORIGIN FOR THE GROUP (A): -8.9396 17.4047 -10.5240 REMARK 3 T TENSOR REMARK 3 T11: 0.3615 T22: 0.3632 REMARK 3 T33: 0.3028 T12: 0.0688 REMARK 3 T13: 0.0389 T23: -0.0137 REMARK 3 L TENSOR REMARK 3 L11: 2.9852 L22: 1.6236 REMARK 3 L33: 3.2310 L12: 0.4695 REMARK 3 L13: 0.9476 L23: -0.2561 REMARK 3 S TENSOR REMARK 3 S11: -0.1622 S12: 0.0915 S13: 0.3100 REMARK 3 S21: 0.4472 S22: -0.1360 S23: 0.2577 REMARK 3 S31: -0.8960 S32: 0.3556 S33: 0.2553 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN C AND (RESID 1 THROUGH 6 ) REMARK 3 ORIGIN FOR THE GROUP (A): 3.5315 3.6485 -11.4496 REMARK 3 T TENSOR REMARK 3 T11: 0.5339 T22: 0.9043 REMARK 3 T33: 0.7458 T12: -0.0524 REMARK 3 T13: 0.0195 T23: 0.0739 REMARK 3 L TENSOR REMARK 3 L11: 3.7874 L22: 3.9178 REMARK 3 L33: 4.3781 L12: 0.0905 REMARK 3 L13: 0.8759 L23: -1.3902 REMARK 3 S TENSOR REMARK 3 S11: -0.2504 S12: 0.0646 S13: 0.2961 REMARK 3 S21: -0.3524 S22: -0.6263 S23: -0.6881 REMARK 3 S31: -0.0945 S32: 0.8670 S33: 0.1812 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3ZMQ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 12-FEB-13. REMARK 100 THE DEPOSITION ID IS D_1290055798. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 27-SEP-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID23-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.8726 REMARK 200 MONOCHROMATOR : SI(111) REMARK 200 OPTICS : KB MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 5375 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.800 REMARK 200 RESOLUTION RANGE LOW (A) : 50.410 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 6.400 REMARK 200 R MERGE (I) : 0.22000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 7.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.48 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 6.60 REMARK 200 R MERGE FOR SHELL (I) : 0.45000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 4.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 3A5K REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 41.08 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.09 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2M MGCL2, 0.1M TRIS-HCL, PH=8.5 30% REMARK 280 (W/V)POLYETHYLENE GLYCOL 4000 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 30.51000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 44.34500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 30.63500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 44.34500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 30.51000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 30.63500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 970 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 11380 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -5.4 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -7 REMARK 465 HIS A -6 REMARK 465 HIS A -5 REMARK 465 HIS A -4 REMARK 465 HIS A -3 REMARK 465 HIS A -2 REMARK 465 HIS A -1 REMARK 465 HIS A 0 REMARK 465 MET A 1 REMARK 465 GLU A 2 REMARK 465 MET A 3 REMARK 465 GLU A 4 REMARK 465 LYS A 5 REMARK 465 GLU A 6 REMARK 465 VAL A 113 REMARK 465 MET A 114 REMARK 465 GLU A 115 REMARK 465 LYS A 116 REMARK 465 GLY A 117 REMARK 465 SER A 118 REMARK 465 LEU A 119 REMARK 465 LYS A 120 REMARK 465 CYS A 121 REMARK 465 ALA A 122 REMARK 465 GLN A 123 REMARK 465 GLU A 186 REMARK 465 SER A 187 REMARK 465 LYS A 239 REMARK 465 ASP A 240 REMARK 465 PHE A 280 REMARK 465 ILE A 281 REMARK 465 MET A 282 REMARK 465 GLY A 283 REMARK 465 ASP A 284 REMARK 465 SER A 285 REMARK 465 SER A 286 REMARK 465 VAL A 287 REMARK 465 GLN A 288 REMARK 465 ASP A 289 REMARK 465 GLN A 290 REMARK 465 TRP A 291 REMARK 465 LYS A 292 REMARK 465 GLU A 293 REMARK 465 LEU A 294 REMARK 465 SER A 295 REMARK 465 HIS A 296 REMARK 465 GLU A 297 REMARK 465 ASP A 298 REMARK 465 LEU A 299 REMARK 465 GLU A 300 REMARK 465 PRO A 301 REMARK 465 PRO A 302 REMARK 465 PRO A 303 REMARK 465 GLU A 304 REMARK 465 HIS A 305 REMARK 465 ILE A 306 REMARK 465 PRO A 307 REMARK 465 PRO A 308 REMARK 465 PRO A 309 REMARK 465 PRO A 310 REMARK 465 ARG A 311 REMARK 465 PRO A 312 REMARK 465 PRO A 313 REMARK 465 LYS A 314 REMARK 465 ARG A 315 REMARK 465 ILE A 316 REMARK 465 LEU A 317 REMARK 465 GLU A 318 REMARK 465 PRO A 319 REMARK 465 HIS A 320 REMARK 465 ASN A 321 REMARK 465 GLY C 7 REMARK 465 GLU C 8 REMARK 465 ASN C 9 REMARK 465 LEU C 10 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 PHE A 7 CG CD1 CD2 CE1 CE2 CZ REMARK 470 GLU A 8 CG CD OE1 OE2 REMARK 470 GLN A 9 CG CD OE1 NE2 REMARK 470 ILE A 10 CG1 CG2 CD1 REMARK 470 LYS A 12 CG CD CE NZ REMARK 470 SER A 13 OG REMARK 470 GLN A 21 CG CD OE1 NE2 REMARK 470 ASP A 22 CG OD1 OD2 REMARK 470 ASP A 29 CG OD1 OD2 REMARK 470 ARG A 33 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 36 CG CD CE NZ REMARK 470 LYS A 39 CG CD CE NZ REMARK 470 LYS A 41 CG CD CE NZ REMARK 470 LYS A 58 CG CD CE NZ REMARK 470 GLN A 61 CG CD OE1 NE2 REMARK 470 GLU A 62 CG CD OE1 OE2 REMARK 470 ASP A 63 CG OD1 OD2 REMARK 470 LYS A 73 CG CD CE NZ REMARK 470 GLU A 75 CG CD OE1 OE2 REMARK 470 GLN A 78 CG CD OE1 NE2 REMARK 470 ASN A 90 CG OD1 ND2 REMARK 470 LYS A 103 CG CD CE NZ REMARK 470 ARG A 105 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 112 CG CD NE CZ NH1 NH2 REMARK 470 GLN A 127 CG CD OE1 NE2 REMARK 470 LYS A 128 CG CD CE NZ REMARK 470 GLU A 130 CG CD OE1 OE2 REMARK 470 LYS A 131 CG CD CE NZ REMARK 470 GLU A 136 CG CD OE1 OE2 REMARK 470 ASP A 137 CG OD1 OD2 REMARK 470 LYS A 141 CG CD CE NZ REMARK 470 THR A 143 OG1 CG2 REMARK 470 ILE A 145 CG1 CG2 CD1 REMARK 470 ILE A 149 CG1 CG2 CD1 REMARK 470 LYS A 150 CG CD CE NZ REMARK 470 SER A 151 OG REMARK 470 TYR A 152 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 GLU A 159 CG CD OE1 OE2 REMARK 470 GLU A 161 CG CD OE1 OE2 REMARK 470 ASN A 162 CG OD1 ND2 REMARK 470 LEU A 163 CG CD1 CD2 REMARK 470 THR A 164 OG1 CG2 REMARK 470 GLN A 166 CG CD OE1 NE2 REMARK 470 GLU A 167 CG CD OE1 OE2 REMARK 470 THR A 168 OG1 CG2 REMARK 470 ARG A 169 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 170 CG CD OE1 OE2 REMARK 470 ASP A 181 CG OD1 OD2 REMARK 470 ASN A 193 CG OD1 ND2 REMARK 470 LYS A 197 CG CD CE NZ REMARK 470 GLU A 200 CG CD OE1 OE2 REMARK 470 SER A 205 OG REMARK 470 GLU A 207 CG CD OE1 OE2 REMARK 470 LYS A 237 CG CD CE NZ REMARK 470 ASP A 245 CG OD1 OD2 REMARK 470 LYS A 247 CG CD CE NZ REMARK 470 LYS A 248 CG CD CE NZ REMARK 470 GLU A 252 CG CD OE1 OE2 REMARK 470 LYS A 255 CG CD CE NZ REMARK 470 ASP A 265 CG OD1 OD2 REMARK 470 ILE A 275 CG1 CG2 CD1 REMARK 470 LYS A 279 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OG SER A 215 O1P FTY C 4 1.77 REMARK 500 NE ARG A 221 O2P FTY C 4 1.94 REMARK 500 OG SER A 215 O2P FTY C 4 2.07 REMARK 500 OD2 ASP A 48 NE2 GLN C 5 2.10 REMARK 500 CB SER A 215 O1P FTY C 4 2.11 REMARK 500 O GLY A 220 OG1 THR A 224 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO A 180 C - N - CD ANGL. DEV. = -12.7 DEGREES REMARK 500 PRO C 6 C - N - CD ANGL. DEV. = -18.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 111 76.25 -103.68 REMARK 500 TYR A 176 92.74 -69.47 REMARK 500 ILE A 219 -66.96 -125.73 REMARK 500 LYS A 247 175.03 -56.72 REMARK 500 LYS A 248 -61.80 71.30 REMARK 500 ILE A 261 111.61 62.90 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3ZMP RELATED DB: PDB REMARK 900 SRC-DERIVED PEPTIDE INHIBITOR COMPLEX OF PTP1B REMARK 999 REMARK 999 SEQUENCE REMARK 999 RESIDUES 527-536, WITH P528A DBREF 3ZMQ A 1 321 UNP P18031 PTN1_HUMAN 1 321 DBREF 3ZMQ C 1 10 UNP P12931 SRC_HUMAN 527 536 SEQADV 3ZMQ MET A -7 UNP P18031 EXPRESSION TAG SEQADV 3ZMQ HIS A -6 UNP P18031 EXPRESSION TAG SEQADV 3ZMQ HIS A -5 UNP P18031 EXPRESSION TAG SEQADV 3ZMQ HIS A -4 UNP P18031 EXPRESSION TAG SEQADV 3ZMQ HIS A -3 UNP P18031 EXPRESSION TAG SEQADV 3ZMQ HIS A -2 UNP P18031 EXPRESSION TAG SEQADV 3ZMQ HIS A -1 UNP P18031 EXPRESSION TAG SEQADV 3ZMQ HIS A 0 UNP P18031 EXPRESSION TAG SEQADV 3ZMQ SER A 215 UNP P18031 CYS 215 ENGINEERED MUTATION SEQADV 3ZMQ ALA C 2 UNP P12931 PRO 528 ENGINEERED MUTATION SEQRES 1 A 329 MET HIS HIS HIS HIS HIS HIS HIS MET GLU MET GLU LYS SEQRES 2 A 329 GLU PHE GLU GLN ILE ASP LYS SER GLY SER TRP ALA ALA SEQRES 3 A 329 ILE TYR GLN ASP ILE ARG HIS GLU ALA SER ASP PHE PRO SEQRES 4 A 329 CYS ARG VAL ALA LYS LEU PRO LYS ASN LYS ASN ARG ASN SEQRES 5 A 329 ARG TYR ARG ASP VAL SER PRO PHE ASP HIS SER ARG ILE SEQRES 6 A 329 LYS LEU HIS GLN GLU ASP ASN ASP TYR ILE ASN ALA SER SEQRES 7 A 329 LEU ILE LYS MET GLU GLU ALA GLN ARG SER TYR ILE LEU SEQRES 8 A 329 THR GLN GLY PRO LEU PRO ASN THR CYS GLY HIS PHE TRP SEQRES 9 A 329 GLU MET VAL TRP GLU GLN LYS SER ARG GLY VAL VAL MET SEQRES 10 A 329 LEU ASN ARG VAL MET GLU LYS GLY SER LEU LYS CYS ALA SEQRES 11 A 329 GLN TYR TRP PRO GLN LYS GLU GLU LYS GLU MET ILE PHE SEQRES 12 A 329 GLU ASP THR ASN LEU LYS LEU THR LEU ILE SER GLU ASP SEQRES 13 A 329 ILE LYS SER TYR TYR THR VAL ARG GLN LEU GLU LEU GLU SEQRES 14 A 329 ASN LEU THR THR GLN GLU THR ARG GLU ILE LEU HIS PHE SEQRES 15 A 329 HIS TYR THR THR TRP PRO ASP PHE GLY VAL PRO GLU SER SEQRES 16 A 329 PRO ALA SER PHE LEU ASN PHE LEU PHE LYS VAL ARG GLU SEQRES 17 A 329 SER GLY SER LEU SER PRO GLU HIS GLY PRO VAL VAL VAL SEQRES 18 A 329 HIS SER SER ALA GLY ILE GLY ARG SER GLY THR PHE CYS SEQRES 19 A 329 LEU ALA ASP THR CYS LEU LEU LEU MET ASP LYS ARG LYS SEQRES 20 A 329 ASP PRO SER SER VAL ASP ILE LYS LYS VAL LEU LEU GLU SEQRES 21 A 329 MET ARG LYS PHE ARG MET GLY LEU ILE GLN THR ALA ASP SEQRES 22 A 329 GLN LEU ARG PHE SER TYR LEU ALA VAL ILE GLU GLY ALA SEQRES 23 A 329 LYS PHE ILE MET GLY ASP SER SER VAL GLN ASP GLN TRP SEQRES 24 A 329 LYS GLU LEU SER HIS GLU ASP LEU GLU PRO PRO PRO GLU SEQRES 25 A 329 HIS ILE PRO PRO PRO PRO ARG PRO PRO LYS ARG ILE LEU SEQRES 26 A 329 GLU PRO HIS ASN SEQRES 1 C 10 GLU ALA GLN FTY GLN PRO GLY GLU ASN LEU MODRES 3ZMQ FTY C 4 TYR DEOXY-DIFLUOROMETHELENE-PHOSPHOTYROSINE HET FTY C 4 18 HETNAM FTY DEOXY-DIFLUOROMETHELENE-PHOSPHOTYROSINE FORMUL 2 FTY C10 H12 F2 N O5 P HELIX 1 1 TRP A 16 GLU A 26 1 11 HELIX 2 2 CYS A 32 LEU A 37 1 6 HELIX 3 3 PRO A 38 ASN A 44 5 7 HELIX 4 4 THR A 91 GLN A 102 1 12 HELIX 5 5 ALA A 189 GLY A 202 1 14 HELIX 6 6 ILE A 219 ARG A 238 1 20 HELIX 7 7 ASP A 245 ARG A 254 1 10 HELIX 8 8 THR A 263 ALA A 278 1 16 SHEET 1 AA 9 ARG A 56 LYS A 58 0 SHEET 2 AA 9 TYR A 66 MET A 74 -1 N ILE A 67 O ILE A 57 SHEET 3 AA 9 ARG A 79 THR A 84 -1 O ARG A 79 N MET A 74 SHEET 4 AA 9 VAL A 211 HIS A 214 1 O VAL A 211 N ILE A 82 SHEET 5 AA 9 VAL A 107 MET A 109 1 O VAL A 108 N HIS A 214 SHEET 6 AA 9 THR A 168 HIS A 175 1 O LEU A 172 N VAL A 107 SHEET 7 AA 9 THR A 154 ASN A 162 -1 O THR A 154 N HIS A 175 SHEET 8 AA 9 LEU A 140 ILE A 149 -1 O LYS A 141 N GLU A 161 SHEET 9 AA 9 MET A 133 PHE A 135 -1 O MET A 133 N LEU A 142 LINK C GLN C 3 N FTY C 4 1555 1555 1.32 LINK C FTY C 4 N GLN C 5 1555 1555 1.32 CISPEP 1 ILE A 10 ASP A 11 0 -29.49 CISPEP 2 VAL A 184 PRO A 185 0 -15.11 CRYST1 61.020 61.270 88.690 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016388 0.000000 0.000000 0.00000 SCALE2 0.000000 0.016321 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011275 0.00000