HEADER CELL CYCLE 13-FEB-13 3ZN3 TITLE N-TERMINAL DOMAIN OF S. POMBE CDC23 APC SUBUNIT COMPND MOL_ID: 1; COMPND 2 MOLECULE: ANAPHASE-PROMOTING COMPLEX SUBUNIT 8; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: RESIDUES 19-301; COMPND 5 SYNONYM: 20S CYCLOSOME/APC COMPLEX PROTEIN APC8, CELL UNTIMELY TORN COMPND 6 PROTEIN 23, CDC23; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SCHIZOSACCHAROMYCES POMBE; SOURCE 3 ORGANISM_COMMON: FISSION YEAST; SOURCE 4 ORGANISM_TAXID: 4896; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS CELL CYCLE, TPR EXPDTA X-RAY DIFFRACTION AUTHOR Z.ZHANG,J.YANG,N.CONIN,K.KULKARNI,D.BARFORD REVDAT 7 08-MAY-24 3ZN3 1 REMARK REVDAT 6 20-NOV-19 3ZN3 1 LINK REVDAT 5 30-OCT-19 3ZN3 1 REMARK LINK REVDAT 4 13-NOV-13 3ZN3 1 JRNL REVDAT 3 01-MAY-13 3ZN3 1 JRNL REVDAT 2 17-APR-13 3ZN3 1 JRNL REVDAT 1 20-FEB-13 3ZN3 0 JRNL AUTH Z.ZHANG,L.CHANG,J.YANG,N.CONIN,K.KULKARN,D.BARFORD JRNL TITL THE FOUR CANONICAL TPR SUBUNITS OF HUMAN APC/C FORM RELATED JRNL TITL 2 HOMO-DIMERIC STRUCTURES AND STACK IN PARALLEL TO FORM A TPR JRNL TITL 3 SUPRAHELIX JRNL REF J.MOL.BIOL. V. 425 4236 2013 JRNL REFN ISSN 0022-2836 JRNL PMID 23583778 JRNL DOI 10.1016/J.JMB.2013.04.004 REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.6.0117 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 154.81 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 20156 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.207 REMARK 3 R VALUE (WORKING SET) : 0.206 REMARK 3 FREE R VALUE : 0.259 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 3.200 REMARK 3 FREE R VALUE TEST SET COUNT : 676 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.90 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.95 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1280 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.44 REMARK 3 BIN R VALUE (WORKING SET) : 0.2100 REMARK 3 BIN FREE R VALUE SET COUNT : 46 REMARK 3 BIN FREE R VALUE : 0.2570 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2010 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 3 REMARK 3 SOLVENT ATOMS : 12 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 31.34 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.69000 REMARK 3 B22 (A**2) : 0.69000 REMARK 3 B33 (A**2) : -1.37000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.162 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.158 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.103 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 6.662 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.946 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.919 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2050 ; 0.018 ; 0.020 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2764 ; 2.006 ; 1.970 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 242 ; 5.386 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 96 ;38.308 ;23.854 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 376 ;19.358 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 12 ;19.609 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 306 ; 0.173 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1516 ; 0.011 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 19 A 308 REMARK 3 ORIGIN FOR THE GROUP (A): -3.0237 -4.4639 26.3820 REMARK 3 T TENSOR REMARK 3 T11: 0.0416 T22: 0.0267 REMARK 3 T33: 0.0152 T12: -0.0114 REMARK 3 T13: -0.0216 T23: 0.0021 REMARK 3 L TENSOR REMARK 3 L11: 0.5399 L22: 0.3146 REMARK 3 L33: 0.7948 L12: 0.0536 REMARK 3 L13: -0.1481 L23: -0.1673 REMARK 3 S TENSOR REMARK 3 S11: -0.0054 S12: 0.0425 S13: 0.0150 REMARK 3 S21: -0.0559 S22: 0.0074 S23: 0.0499 REMARK 3 S31: 0.0434 S32: -0.0303 S33: -0.0020 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. HYDROGENS HAVE BEEN USED IF PRESENT IN THE INPUT. U REMARK 3 VALUES WITH TLS ADDED. REMARK 4 REMARK 4 3ZN3 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 13-FEB-13. REMARK 100 THE DEPOSITION ID IS D_1290055814. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID29 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALEIT REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 20943 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 45.830 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 23.70 REMARK 200 R MERGE (I) : 0.11000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 18.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.00 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.6 REMARK 200 DATA REDUNDANCY IN SHELL : 18.80 REMARK 200 R MERGE FOR SHELL (I) : 0.69000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 4.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NONE REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 37.90 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.95 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 200 MM SODIUM FORMATE, PH 7.5, 20% REMARK 280 (W/V) PEG 3350, PH 8 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 77.40700 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 28.43750 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 28.43750 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 116.11050 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 28.43750 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 28.43750 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 38.70350 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 28.43750 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 28.43750 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 116.11050 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 28.43750 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 28.43750 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 38.70350 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 77.40700 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5940 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 23600 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -174.8 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 77.40700 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLU A 57 REMARK 465 MET A 58 REMARK 465 GLU A 59 REMARK 465 HIS A 60 REMARK 465 ILE A 61 REMARK 465 PRO A 62 REMARK 465 PHE A 63 REMARK 465 SER A 64 REMARK 465 SER A 65 REMARK 465 THR A 66 REMARK 465 PRO A 67 REMARK 465 THR A 68 REMARK 465 GLY A 69 REMARK 465 GLU A 70 REMARK 465 PHE A 71 REMARK 465 ASP A 72 REMARK 465 LEU A 73 REMARK 465 ASP A 74 REMARK 465 PRO A 75 REMARK 465 ASP A 76 REMARK 465 MET A 77 REMARK 465 GLU A 136 REMARK 465 GLU A 137 REMARK 465 ASN A 138 REMARK 465 GLU A 139 REMARK 465 THR A 140 REMARK 465 LEU A 141 REMARK 465 LEU A 142 REMARK 465 ASN A 143 REMARK 465 THR A 144 REMARK 465 ASN A 145 REMARK 465 LEU A 146 REMARK 465 THR A 147 REMARK 465 LEU A 148 REMARK 465 SER A 149 REMARK 465 SER A 150 REMARK 465 THR A 151 REMARK 465 ASP A 285 REMARK 465 PHE A 286 REMARK 465 ASP A 287 REMARK 465 GLU A 288 REMARK 465 ALA A 289 REMARK 465 GLU A 290 REMARK 465 SER A 291 REMARK 465 LEU A 292 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ILE A 56 CG1 CG2 CD1 REMARK 470 ASN A 79 CG OD1 ND2 REMARK 470 GLU A 80 CG CD OE1 OE2 REMARK 470 LYS A 187 CD CE NZ REMARK 470 PHE A 293 CD1 CD2 CE1 CE2 CZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 CD1 TYR A 281 NH1 ARG A 284 1.26 REMARK 500 CE1 TYR A 281 NH1 ARG A 284 1.55 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 TRP A 45 CE2 TRP A 45 CD2 0.075 REMARK 500 VAL A 251 C ASN A 252 N -0.199 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 105 NE - CZ - NH1 ANGL. DEV. = 3.2 DEGREES REMARK 500 LEU A 123 CB - CG - CD1 ANGL. DEV. = 12.0 DEGREES REMARK 500 ARG A 186 NE - CZ - NH1 ANGL. DEV. = 3.1 DEGREES REMARK 500 ASN A 252 CB - CA - C ANGL. DEV. = -14.6 DEGREES REMARK 500 ASN A 252 CA - C - N ANGL. DEV. = 13.9 DEGREES REMARK 500 ASN A 252 O - C - N ANGL. DEV. = -28.7 DEGREES REMARK 500 ARG A 270 NE - CZ - NH2 ANGL. DEV. = -3.7 DEGREES REMARK 500 ARG A 276 NE - CZ - NH1 ANGL. DEV. = 4.0 DEGREES REMARK 500 ARG A 276 NE - CZ - NH2 ANGL. DEV. = -4.8 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN A 188 76.07 -101.38 REMARK 500 ASN A 252 -155.23 -98.70 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 ASN A 252 -32.65 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HG A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HG A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HG A 403 DBREF 3ZN3 A 19 301 UNP O94556 APC8_SCHPO 19 301 SEQADV 3ZN3 MET A 18 UNP O94556 EXPRESSION TAG SEQADV 3ZN3 ALA A 302 UNP O94556 EXPRESSION TAG SEQADV 3ZN3 GLU A 303 UNP O94556 EXPRESSION TAG SEQADV 3ZN3 ASN A 304 UNP O94556 EXPRESSION TAG SEQADV 3ZN3 LEU A 305 UNP O94556 EXPRESSION TAG SEQADV 3ZN3 TYR A 306 UNP O94556 EXPRESSION TAG SEQADV 3ZN3 PHE A 307 UNP O94556 EXPRESSION TAG SEQADV 3ZN3 GLN A 308 UNP O94556 EXPRESSION TAG SEQRES 1 A 291 MET GLN LEU ARG GLU ILE ARG ASN CYS LEU LEU LYS CYS SEQRES 2 A 291 ILE SER GLU CYS SER GLU ARG GLY LEU VAL TYR ALA VAL SEQRES 3 A 291 ARG TRP ALA ALA GLU MET LEU ASN GLY MET ASN PRO ILE SEQRES 4 A 291 GLU MET GLU HIS ILE PRO PHE SER SER THR PRO THR GLY SEQRES 5 A 291 GLU PHE ASP LEU ASP PRO ASP MET ALA ASN GLU LYS LEU SEQRES 6 A 291 LEU GLU VAL GLU GLU LYS ASN ILE TYR LEU LEU ALA LYS SEQRES 7 A 291 SER TYR PHE ASP CYS LYS GLU PHE GLU ARG ALA ALA TYR SEQRES 8 A 291 THR LEU GLN ASN CYS LYS SER SER LYS SER ILE PHE LEU SEQRES 9 A 291 ARG LEU TYR SER LYS TYR LEU ALA GLY GLU LYS LYS SER SEQRES 10 A 291 GLU GLU GLU ASN GLU THR LEU LEU ASN THR ASN LEU THR SEQRES 11 A 291 LEU SER SER THR ASN ARG GLU PHE TYR TYR ILE SER GLU SEQRES 12 A 291 VAL LEU GLU SER LEU HIS TYR GLN GLY ASN LYS ASP PRO SEQRES 13 A 291 TYR LEU LEU TYR LEU SER GLY VAL VAL TYR ARG LYS ARG SEQRES 14 A 291 LYS GLN ASP SER LYS ALA ILE ASP PHE LEU LYS SER CYS SEQRES 15 A 291 VAL LEU LYS ALA PRO PHE PHE TRP SER ALA TRP LEU GLU SEQRES 16 A 291 LEU SER LEU SER ILE ASP SER LEU GLU THR LEU THR THR SEQRES 17 A 291 VAL VAL SER GLN LEU PRO SER THR HIS ILE MET THR LYS SEQRES 18 A 291 ILE PHE TYR VAL TYR ALA SER HIS GLU LEU HIS GLN VAL SEQRES 19 A 291 ASN SER SER ALA TYR GLU LYS LEU ALA GLU ALA GLU ILE SEQRES 20 A 291 ILE PHE PRO ASN SER ARG TYR LEU LYS THR GLN ARG ALA SEQRES 21 A 291 LEU LEU THR TYR ASP SER ARG ASP PHE ASP GLU ALA GLU SEQRES 22 A 291 SER LEU PHE GLU ASN ILE LEU THR ASN ASP PRO ALA GLU SEQRES 23 A 291 ASN LEU TYR PHE GLN HET HG A 401 1 HET HG A 402 1 HET HG A 403 1 HETNAM HG MERCURY (II) ION FORMUL 2 HG 3(HG 2+) FORMUL 5 HOH *12(H2 O) HELIX 1 1 GLN A 19 ARG A 37 1 19 HELIX 2 2 LEU A 39 GLY A 52 1 14 HELIX 3 3 ALA A 78 GLU A 87 1 10 HELIX 4 4 GLU A 87 CYS A 100 1 14 HELIX 5 5 GLU A 102 LEU A 110 1 9 HELIX 6 6 SER A 115 GLU A 135 1 21 HELIX 7 7 GLU A 154 GLY A 169 1 16 HELIX 8 8 ASP A 172 ARG A 186 1 15 HELIX 9 9 GLN A 188 ALA A 203 1 16 HELIX 10 10 PHE A 206 SER A 216 1 11 HELIX 11 11 SER A 219 SER A 228 1 10 HELIX 12 12 HIS A 234 HIS A 249 1 16 HELIX 13 13 ASN A 252 PHE A 266 1 15 HELIX 14 14 SER A 269 ARG A 284 1 16 HELIX 15 15 ASN A 295 ASN A 299 5 5 HELIX 16 16 ASP A 300 LEU A 305 1 6 LINK SG CYS A 26 HG HG A 403 1555 1555 2.34 LINK SG CYS A 30 HG HG A 401 1555 1555 2.50 LINK SG CYS A 113 HG HG A 402 1555 1555 2.50 SITE 1 AC1 3 CYS A 30 PHE A 205 PHE A 206 SITE 1 AC2 2 ASN A 112 CYS A 113 SITE 1 AC3 1 CYS A 26 CRYST1 56.875 56.875 154.814 90.00 90.00 90.00 P 43 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017582 0.000000 0.000000 0.00000 SCALE2 0.000000 0.017582 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006459 0.00000