HEADER HYDROLASE 18-FEB-13 3ZNW OBSLTE 21-MAY-14 3ZNW 4D2O TITLE CRYSTAL STRUCTURE OF THE CLASS A EXTENDED-SPECTRUM BETA- TITLE 2 LACTAMASE PER-2 COMPND MOL_ID: 1; COMPND 2 MOLECULE: EXTENDED-SPECTRUM BETA-LACTAMASE; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: RESIDUES 25-308; COMPND 5 SYNONYM: CLASS A BETA-LACTAMASE; COMPND 6 EC: 3.5.2.6; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CITROBACTER FREUNDII; SOURCE 3 ORGANISM_TAXID: 546; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 6 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 7 EXPRESSION_SYSTEM_VECTOR: PET28 KEYWDS HYDROLASE, OXYIMINO-CEPHALOSPORINASE, ESBL, CEFOTAXIMASE EXPDTA X-RAY DIFFRACTION AUTHOR P.POWER,R.HERMAN,M.RUGGIERO,F.KERFF,M.GALLENI,G.GUTKIND,P.CHARLIER, AUTHOR 2 E.SAUVAGE REVDAT 2 21-MAY-14 3ZNW 1 OBSLTE REVDAT 1 08-JAN-14 3ZNW 0 JRNL AUTH M.RUGGIERO,E.SAUVAGE,R.HERMAN,M.GALLENI,G.GUTKIND, JRNL AUTH 2 P.CHARLIER,P.POWER JRNL TITL CRYSTAL STRUCTURE OF THE EXTENDED-SPECTRUM CLASS A JRNL TITL 2 BETA-LACTAMASE PER-2 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.09 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.6.0117 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.09 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 41.95 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.22 REMARK 3 NUMBER OF REFLECTIONS : 25497 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.20371 REMARK 3 R VALUE (WORKING SET) : 0.20160 REMARK 3 FREE R VALUE : 0.24228 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.0 REMARK 3 FREE R VALUE TEST SET COUNT : 1344 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.095 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.149 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1778 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 96.60 REMARK 3 BIN R VALUE (WORKING SET) : 0.274 REMARK 3 BIN FREE R VALUE SET COUNT : 100 REMARK 3 BIN FREE R VALUE : 0.314 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4255 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 110 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 30.73 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.01 REMARK 3 B22 (A**2) : 0.07 REMARK 3 B33 (A**2) : -0.03 REMARK 3 B12 (A**2) : 0.00 REMARK 3 B13 (A**2) : 0.04 REMARK 3 B23 (A**2) : 0.00 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.317 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.214 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.171 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 13.362 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.946 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.926 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4314 ; 0.013 ; 0.020 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5830 ; 1.784 ; 1.955 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 534 ; 6.470 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 181 ;36.695 ;26.243 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 759 ;15.508 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 10 ;23.933 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 692 ; 0.110 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3126 ; 0.008 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 12 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 24 A 89 REMARK 3 ORIGIN FOR THE GROUP (A): 13.0123 -17.4123 41.1019 REMARK 3 T TENSOR REMARK 3 T11: 0.1293 T22: 0.1222 REMARK 3 T33: 0.0874 T12: -0.0046 REMARK 3 T13: -0.0134 T23: -0.0107 REMARK 3 L TENSOR REMARK 3 L11: 0.6095 L22: 0.6760 REMARK 3 L33: 0.8203 L12: -0.2871 REMARK 3 L13: 0.3718 L23: -0.4465 REMARK 3 S TENSOR REMARK 3 S11: -0.0031 S12: -0.0280 S13: 0.0396 REMARK 3 S21: 0.0726 S22: -0.0126 S23: -0.0723 REMARK 3 S31: -0.0013 S32: 0.0384 S33: 0.0157 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 90 A 156 REMARK 3 ORIGIN FOR THE GROUP (A): 7.1532 -4.8422 21.2602 REMARK 3 T TENSOR REMARK 3 T11: 0.1083 T22: 0.1102 REMARK 3 T33: 0.1153 T12: 0.0025 REMARK 3 T13: 0.0005 T23: 0.0093 REMARK 3 L TENSOR REMARK 3 L11: 0.3787 L22: 0.6987 REMARK 3 L33: 1.7922 L12: -0.2309 REMARK 3 L13: 0.4428 L23: 0.3328 REMARK 3 S TENSOR REMARK 3 S11: 0.0234 S12: 0.0303 S13: 0.0338 REMARK 3 S21: -0.0740 S22: -0.0492 S23: -0.0429 REMARK 3 S31: -0.0601 S32: 0.0172 S33: 0.0258 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 157 A 174 REMARK 3 ORIGIN FOR THE GROUP (A): 20.0788 -4.4860 31.4334 REMARK 3 T TENSOR REMARK 3 T11: 0.1326 T22: 0.1011 REMARK 3 T33: 0.1364 T12: 0.0075 REMARK 3 T13: -0.0688 T23: -0.0054 REMARK 3 L TENSOR REMARK 3 L11: 1.9873 L22: 1.8169 REMARK 3 L33: 2.5078 L12: 0.3956 REMARK 3 L13: -1.1723 L23: -1.9992 REMARK 3 S TENSOR REMARK 3 S11: 0.0344 S12: 0.1299 S13: -0.0260 REMARK 3 S21: 0.0827 S22: -0.0956 S23: -0.1123 REMARK 3 S31: -0.0745 S32: 0.0425 S33: 0.0612 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 175 A 239 REMARK 3 ORIGIN FOR THE GROUP (A): 7.4528 -17.0066 33.7012 REMARK 3 T TENSOR REMARK 3 T11: 0.1057 T22: 0.1286 REMARK 3 T33: 0.1048 T12: -0.0033 REMARK 3 T13: 0.0014 T23: -0.0001 REMARK 3 L TENSOR REMARK 3 L11: 0.0861 L22: 0.8241 REMARK 3 L33: 0.4583 L12: -0.1249 REMARK 3 L13: 0.1957 L23: -0.2716 REMARK 3 S TENSOR REMARK 3 S11: -0.0271 S12: -0.0092 S13: -0.0038 REMARK 3 S21: -0.0018 S22: 0.0251 S23: 0.0160 REMARK 3 S31: -0.0274 S32: -0.0343 S33: 0.0020 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 240 A 272 REMARK 3 ORIGIN FOR THE GROUP (A): 15.7219 -22.2398 35.1873 REMARK 3 T TENSOR REMARK 3 T11: 0.1137 T22: 0.1165 REMARK 3 T33: 0.0883 T12: 0.0002 REMARK 3 T13: -0.0259 T23: 0.0063 REMARK 3 L TENSOR REMARK 3 L11: 4.1783 L22: 1.3881 REMARK 3 L33: 0.7098 L12: 0.7371 REMARK 3 L13: -0.9861 L23: -0.5042 REMARK 3 S TENSOR REMARK 3 S11: 0.0064 S12: 0.0509 S13: 0.0716 REMARK 3 S21: -0.0536 S22: -0.0140 S23: -0.0506 REMARK 3 S31: 0.0686 S32: 0.0458 S33: 0.0076 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 273 A 297 REMARK 3 ORIGIN FOR THE GROUP (A): 11.4472 -32.3596 40.0934 REMARK 3 T TENSOR REMARK 3 T11: 0.1559 T22: 0.1036 REMARK 3 T33: 0.1082 T12: 0.0210 REMARK 3 T13: -0.0441 T23: 0.0025 REMARK 3 L TENSOR REMARK 3 L11: 4.5386 L22: 1.5203 REMARK 3 L33: 2.9001 L12: 2.1906 REMARK 3 L13: -2.3636 L23: -1.7742 REMARK 3 S TENSOR REMARK 3 S11: -0.0690 S12: -0.1048 S13: -0.1870 REMARK 3 S21: -0.1024 S22: 0.0040 S23: -0.0553 REMARK 3 S31: 0.2313 S32: 0.0081 S33: 0.0651 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 26 B 87 REMARK 3 ORIGIN FOR THE GROUP (A): -9.9561 -22.4885 -0.8092 REMARK 3 T TENSOR REMARK 3 T11: 0.1162 T22: 0.1265 REMARK 3 T33: 0.1019 T12: -0.0033 REMARK 3 T13: -0.0255 T23: -0.0121 REMARK 3 L TENSOR REMARK 3 L11: 0.2090 L22: 0.4407 REMARK 3 L33: 0.9905 L12: 0.0648 REMARK 3 L13: 0.1624 L23: 0.0540 REMARK 3 S TENSOR REMARK 3 S11: -0.0197 S12: 0.0136 S13: 0.0020 REMARK 3 S21: -0.0833 S22: -0.0054 S23: 0.0146 REMARK 3 S31: -0.0529 S32: -0.0811 S33: 0.0251 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 88 B 137 REMARK 3 ORIGIN FOR THE GROUP (A): 9.9728 -31.7837 16.2397 REMARK 3 T TENSOR REMARK 3 T11: 0.1182 T22: 0.1177 REMARK 3 T33: 0.0909 T12: -0.0098 REMARK 3 T13: -0.0018 T23: 0.0029 REMARK 3 L TENSOR REMARK 3 L11: 1.5752 L22: 1.8463 REMARK 3 L33: 1.4845 L12: 0.1246 REMARK 3 L13: 0.5676 L23: -0.5083 REMARK 3 S TENSOR REMARK 3 S11: 0.0637 S12: 0.0327 S13: -0.0950 REMARK 3 S21: -0.0889 S22: -0.0597 S23: -0.1443 REMARK 3 S31: -0.0194 S32: 0.0876 S33: -0.0040 REMARK 3 REMARK 3 TLS GROUP : 9 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 138 B 195 REMARK 3 ORIGIN FOR THE GROUP (A): -2.8322 -33.1737 0.8100 REMARK 3 T TENSOR REMARK 3 T11: 0.1271 T22: 0.1018 REMARK 3 T33: 0.0768 T12: 0.0037 REMARK 3 T13: -0.0338 T23: -0.0259 REMARK 3 L TENSOR REMARK 3 L11: 1.6640 L22: 1.4030 REMARK 3 L33: 1.2822 L12: -0.2151 REMARK 3 L13: 0.1160 L23: -0.2694 REMARK 3 S TENSOR REMARK 3 S11: 0.0349 S12: 0.0444 S13: -0.0002 REMARK 3 S21: -0.1087 S22: 0.0224 S23: -0.0585 REMARK 3 S31: 0.1267 S32: -0.0231 S33: -0.0573 REMARK 3 REMARK 3 TLS GROUP : 10 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 196 B 251 REMARK 3 ORIGIN FOR THE GROUP (A): -4.2774 -19.9552 9.1844 REMARK 3 T TENSOR REMARK 3 T11: 0.1009 T22: 0.1234 REMARK 3 T33: 0.0975 T12: 0.0123 REMARK 3 T13: -0.0172 T23: -0.0179 REMARK 3 L TENSOR REMARK 3 L11: 0.7005 L22: 1.2950 REMARK 3 L33: 0.8084 L12: 0.2380 REMARK 3 L13: -0.0048 L23: -0.5807 REMARK 3 S TENSOR REMARK 3 S11: -0.0420 S12: -0.0060 S13: -0.0681 REMARK 3 S21: 0.0422 S22: -0.0099 S23: -0.0062 REMARK 3 S31: -0.0472 S32: -0.0572 S33: 0.0519 REMARK 3 REMARK 3 TLS GROUP : 11 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 252 B 272 REMARK 3 ORIGIN FOR THE GROUP (A): -7.8924 -16.0092 1.5418 REMARK 3 T TENSOR REMARK 3 T11: 0.1240 T22: 0.1060 REMARK 3 T33: 0.1218 T12: 0.0247 REMARK 3 T13: -0.0250 T23: -0.0040 REMARK 3 L TENSOR REMARK 3 L11: 1.1836 L22: 0.4741 REMARK 3 L33: 2.8678 L12: 0.3640 REMARK 3 L13: -1.5467 L23: 0.0666 REMARK 3 S TENSOR REMARK 3 S11: -0.0188 S12: -0.0587 S13: 0.0157 REMARK 3 S21: -0.0355 S22: 0.0012 S23: 0.0403 REMARK 3 S31: 0.0119 S32: 0.0533 S33: 0.0176 REMARK 3 REMARK 3 TLS GROUP : 12 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 273 B 297 REMARK 3 ORIGIN FOR THE GROUP (A): -13.4917 -9.4287 1.8527 REMARK 3 T TENSOR REMARK 3 T11: 0.1801 T22: 0.1017 REMARK 3 T33: 0.0929 T12: 0.0354 REMARK 3 T13: -0.0513 T23: 0.0219 REMARK 3 L TENSOR REMARK 3 L11: 9.9942 L22: 0.4634 REMARK 3 L33: 1.8337 L12: -1.3028 REMARK 3 L13: -3.1498 L23: 0.0386 REMARK 3 S TENSOR REMARK 3 S11: -0.1037 S12: 0.1762 S13: 0.1386 REMARK 3 S21: 0.0233 S22: 0.0928 S23: 0.0456 REMARK 3 S31: -0.1435 S32: -0.1538 S33: 0.0109 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE REMARK 3 RIDING POSITIONS. REMARK 4 REMARK 4 3ZNW COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 18-FEB-13. REMARK 100 THE PDBE ID CODE IS EBI-55872. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 23-SEP-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SOLEIL REMARK 200 BEAMLINE : PROXIMA 1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.98011 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL (PILATUS 6M) REMARK 200 DETECTOR MANUFACTURER : DECTRIS REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 26893 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.10 REMARK 200 RESOLUTION RANGE LOW (A) : 41.85 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.0 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 4.4 REMARK 200 R MERGE (I) : 0.16 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 6.00 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.21 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 4.3 REMARK 200 R MERGE FOR SHELL (I) : 0.74 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 1.80 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 1E25 REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 34.99 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.91 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 41.95200 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 23 REMARK 465 LEU A 103 REMARK 465 GLN A 103A REMARK 465 ASN A 103B REMARK 465 SER A 298 REMARK 465 PRO A 299 REMARK 465 ASP A 300 REMARK 465 SER B 23 REMARK 465 ALA B 24 REMARK 465 GLN B 25 REMARK 465 SER B 298 REMARK 465 PRO B 299 REMARK 465 ASP B 300 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLN A 112A C GLY A 112B N 0.152 REMARK 500 ARG A 240A C ALA A 240B N 0.195 REMARK 500 ALA A 240B C GLY A 240C N 0.116 REMARK 500 ARG B 240A C ALA B 240B N 0.162 REMARK 500 ALA B 240B C GLY B 240C N 0.114 REMARK 500 PRO B 253 C ASP B 255 N 0.144 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN A 25 74.52 52.18 REMARK 500 GLN A 69 -137.31 47.13 REMARK 500 SER A 106 94.67 -162.62 REMARK 500 ASP A 172 119.09 -162.07 REMARK 500 ASN A 179 79.33 -101.12 REMARK 500 LYS A 196 16.28 81.95 REMARK 500 ARG A 220 -119.49 -89.68 REMARK 500 ASN B 61 80.97 66.80 REMARK 500 GLN B 69 -141.43 44.81 REMARK 500 SER B 70 3.37 -69.04 REMARK 500 ASN B 103B -43.43 -139.16 REMARK 500 GLU B 159 60.39 -104.16 REMARK 500 ARG B 220 -113.77 -94.61 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CHIRAL CENTERS REMARK 500 REMARK 500 UNEXPECTED CONFIGURATION OF THE FOLLOWING CHIRAL REMARK 500 CENTER(S) USING IMPROPER CA--C--CB--N CHIRALITY REMARK 500 FOR AMINO ACIDS AND C1'--O4'--N1(N9)--C2' FOR REMARK 500 NUCLEIC ACIDS OR EQUIVALENT ANGLE REMARK 500 M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,6X,F5.1,6X,A1,10X,A1,3X,A16) REMARK 500 REMARK 500 M RES CSSEQI IMPROPER EXPECTED FOUND DETAILS REMARK 500 PHE A 72 25.0 L L OUTSIDE RANGE REMARK 500 PHE B 72 24.5 L L OUTSIDE RANGE REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3ZNT RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF OXA-24 CLASS D BETA-LACTAMASE REMARK 900 WITH TAZOBACTAM REMARK 900 RELATED ID: 3ZNY RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE CLASS A EXTENDED-SPECTRUM REMARK 900 BETA-LACTAMASE CTX-M-96, A NATURAL D240G MUTANT REMARK 900 DERIVED FROM CTX-M-12 DBREF 3ZNW A 23 300 UNP P74842 P74842_SALTM 25 308 DBREF 3ZNW B 23 300 UNP P74842 P74842_SALTM 25 308 SEQRES 1 A 284 SER ALA GLN SER PRO LEU LEU LYS GLU GLN ILE GLU THR SEQRES 2 A 284 ILE VAL THR GLY LYS LYS ALA THR VAL GLY VAL ALA VAL SEQRES 3 A 284 TRP GLY PRO ASP ASP LEU GLU PRO LEU LEU LEU ASN PRO SEQRES 4 A 284 PHE GLU LYS PHE PRO MET GLN SER VAL PHE LYS LEU HIS SEQRES 5 A 284 LEU ALA MET LEU VAL LEU HIS GLN VAL ASP GLN GLY LYS SEQRES 6 A 284 LEU ASP LEU ASN GLN SER VAL THR VAL ASN ARG ALA ALA SEQRES 7 A 284 VAL LEU GLN ASN THR TRP SER PRO MET MET LYS ASP HIS SEQRES 8 A 284 GLN GLY ASP GLU PHE THR VAL ALA VAL GLN GLN LEU LEU SEQRES 9 A 284 GLN TYR SER VAL SER HIS SER ASP ASN VAL ALA CYS ASP SEQRES 10 A 284 LEU LEU PHE GLU LEU VAL GLY GLY PRO GLN ALA LEU HIS SEQRES 11 A 284 ALA TYR ILE GLN SER LEU GLY VAL LYS GLU ALA ALA VAL SEQRES 12 A 284 VAL ALA ASN GLU ALA GLN MET HIS ALA ASP ASP GLN VAL SEQRES 13 A 284 GLN TYR GLN ASN TRP THR SER MET LYS ALA ALA ALA GLN SEQRES 14 A 284 VAL LEU GLN LYS PHE GLU GLN LYS LYS GLN LEU SER GLU SEQRES 15 A 284 THR SER GLN ALA LEU LEU TRP LYS TRP MET VAL GLU THR SEQRES 16 A 284 THR THR GLY PRO GLN ARG LEU LYS GLY LEU LEU PRO ALA SEQRES 17 A 284 GLY THR ILE VAL ALA HIS LYS THR GLY THR SER GLY VAL SEQRES 18 A 284 ARG ALA GLY LYS THR ALA ALA THR ASN ASP ALA GLY VAL SEQRES 19 A 284 ILE MET LEU PRO ASP GLY ARG PRO LEU LEU VAL ALA VAL SEQRES 20 A 284 PHE VAL LYS ASP SER ALA GLU SER GLU ARG THR ASN GLU SEQRES 21 A 284 ALA ILE ILE ALA GLN VAL ALA GLN ALA ALA TYR GLN PHE SEQRES 22 A 284 GLU LEU LYS LYS LEU SER ALA VAL SER PRO ASP SEQRES 1 B 284 SER ALA GLN SER PRO LEU LEU LYS GLU GLN ILE GLU THR SEQRES 2 B 284 ILE VAL THR GLY LYS LYS ALA THR VAL GLY VAL ALA VAL SEQRES 3 B 284 TRP GLY PRO ASP ASP LEU GLU PRO LEU LEU LEU ASN PRO SEQRES 4 B 284 PHE GLU LYS PHE PRO MET GLN SER VAL PHE LYS LEU HIS SEQRES 5 B 284 LEU ALA MET LEU VAL LEU HIS GLN VAL ASP GLN GLY LYS SEQRES 6 B 284 LEU ASP LEU ASN GLN SER VAL THR VAL ASN ARG ALA ALA SEQRES 7 B 284 VAL LEU GLN ASN THR TRP SER PRO MET MET LYS ASP HIS SEQRES 8 B 284 GLN GLY ASP GLU PHE THR VAL ALA VAL GLN GLN LEU LEU SEQRES 9 B 284 GLN TYR SER VAL SER HIS SER ASP ASN VAL ALA CYS ASP SEQRES 10 B 284 LEU LEU PHE GLU LEU VAL GLY GLY PRO GLN ALA LEU HIS SEQRES 11 B 284 ALA TYR ILE GLN SER LEU GLY VAL LYS GLU ALA ALA VAL SEQRES 12 B 284 VAL ALA ASN GLU ALA GLN MET HIS ALA ASP ASP GLN VAL SEQRES 13 B 284 GLN TYR GLN ASN TRP THR SER MET LYS ALA ALA ALA GLN SEQRES 14 B 284 VAL LEU GLN LYS PHE GLU GLN LYS LYS GLN LEU SER GLU SEQRES 15 B 284 THR SER GLN ALA LEU LEU TRP LYS TRP MET VAL GLU THR SEQRES 16 B 284 THR THR GLY PRO GLN ARG LEU LYS GLY LEU LEU PRO ALA SEQRES 17 B 284 GLY THR ILE VAL ALA HIS LYS THR GLY THR SER GLY VAL SEQRES 18 B 284 ARG ALA GLY LYS THR ALA ALA THR ASN ASP ALA GLY VAL SEQRES 19 B 284 ILE MET LEU PRO ASP GLY ARG PRO LEU LEU VAL ALA VAL SEQRES 20 B 284 PHE VAL LYS ASP SER ALA GLU SER GLU ARG THR ASN GLU SEQRES 21 B 284 ALA ILE ILE ALA GLN VAL ALA GLN ALA ALA TYR GLN PHE SEQRES 22 B 284 GLU LEU LYS LYS LEU SER ALA VAL SER PRO ASP FORMUL 3 HOH *110(H2 O) HELIX 1 1 GLN A 25 THR A 38 1 14 HELIX 2 2 VAL A 71 GLN A 86 1 16 HELIX 3 3 SER A 106 HIS A 112 1 7 HELIX 4 4 VAL A 119 SER A 130 1 12 HELIX 5 5 ASP A 131 GLY A 143 1 13 HELIX 6 6 GLY A 143 LEU A 155 1 13 HELIX 7 7 ASN A 165 ASP A 172 1 8 HELIX 8 8 GLN A 174 GLN A 178 5 5 HELIX 9 9 SER A 182 LYS A 196 1 15 HELIX 10 10 SER A 200 THR A 214 1 15 HELIX 11 11 SER A 271 ALA A 296 1 26 HELIX 12 12 SER B 26 THR B 38 1 13 HELIX 13 13 VAL B 71 GLN B 86 1 16 HELIX 14 14 ALA B 100 VAL B 102 5 3 HELIX 15 15 SER B 106 HIS B 112 1 7 HELIX 16 16 VAL B 119 SER B 130 1 12 HELIX 17 17 ASP B 131 GLY B 143 1 13 HELIX 18 18 GLY B 144 LEU B 155 1 12 HELIX 19 19 ASN B 165 ASP B 172 1 8 HELIX 20 20 GLN B 174 GLN B 178 5 5 HELIX 21 21 SER B 182 GLN B 195 1 14 HELIX 22 22 SER B 200 THR B 214 1 15 HELIX 23 23 SER B 271 LEU B 294 1 24 SHEET 1 AA 5 LEU A 57 LEU A 60 0 SHEET 2 AA 5 THR A 43 TRP A 49 -1 O VAL A 46 N LEU A 60 SHEET 3 AA 5 PRO A 258 SER A 268 -1 O LEU A 260 N TRP A 49 SHEET 4 AA 5 LYS A 240D MET A 251 -1 O THR A 241 N SER A 268 SHEET 5 AA 5 VAL A 240 ARG A 240A 1 O ARG A 240A N LYS A 240D SHEET 1 AB 5 LEU A 57 LEU A 60 0 SHEET 2 AB 5 THR A 43 TRP A 49 -1 O VAL A 46 N LEU A 60 SHEET 3 AB 5 PRO A 258 SER A 268 -1 O LEU A 260 N TRP A 49 SHEET 4 AB 5 LYS A 240D MET A 251 -1 O THR A 241 N SER A 268 SHEET 5 AB 5 VAL A 231 THR A 237 -1 O ALA A 232 N VAL A 249 SHEET 1 AC 2 VAL A 240 ARG A 240A 0 SHEET 2 AC 2 LYS A 240D MET A 251 1 O LYS A 240D N ARG A 240A SHEET 1 AD 3 PHE A 66 PRO A 67 0 SHEET 2 AD 3 TRP A 180 THR A 181 -1 O THR A 181 N PHE A 66 SHEET 3 AD 3 ALA A 160 ALA A 161 -1 O ALA A 161 N TRP A 180 SHEET 1 AE 2 SER A 94 ASN A 98 0 SHEET 2 AE 2 GLU A 114 ALA A 118 -1 O PHE A 115 N VAL A 97 SHEET 1 BA 5 LEU B 57 LEU B 60 0 SHEET 2 BA 5 THR B 43 TRP B 49 -1 O VAL B 46 N LEU B 60 SHEET 3 BA 5 PRO B 258 SER B 268 -1 O LEU B 260 N TRP B 49 SHEET 4 BA 5 THR B 241 MET B 251 -1 O THR B 241 N SER B 268 SHEET 5 BA 5 VAL B 231 THR B 237 -1 O ALA B 232 N VAL B 249 SHEET 1 BB 2 PHE B 66 PRO B 67 0 SHEET 2 BB 2 TRP B 180 THR B 181 -1 O THR B 181 N PHE B 66 SHEET 1 BC 2 SER B 94 ASN B 98 0 SHEET 2 BC 2 GLU B 114 ALA B 118 -1 O PHE B 115 N VAL B 97 CRYST1 41.492 83.904 68.963 90.00 103.91 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.024101 0.000000 0.005969 0.00000 SCALE2 0.000000 0.011918 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014939 0.00000