HEADER HYDROLASE 28-FEB-13 3ZPO TITLE CRYSTAL STRUCTURE OF JMJC DOMAIN OF HUMAN HISTONE DEMETHYLASE UTY WITH TITLE 2 BOUND GSK J1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: HISTONE DEMETHYLASE UTY; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: JMJC DOMAIN, RESIDUES 878-1347; COMPND 5 SYNONYM: UBIQUITOUSLY-TRANSCRIBED TPR PROTEIN ON THE Y CHROMOSOME, COMPND 6 UBIQUITOUSLY-TRANSCRIBED Y CHROMOSOME TETRATRICOPEPTIDE REPEAT COMPND 7 PROTEIN; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 6 EXPRESSION_SYSTEM_COMMON: FALL ARMYWORM; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 7108; SOURCE 8 EXPRESSION_SYSTEM_CELL_LINE: SF9; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: BACULOVIRUS; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PFB-CT10HF-LIC KEYWDS HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR M.VOLLMAR,C.GILEADI,L.SHRESTHA,S.GOUBIN,C.JOHANSSON,T.KROJER,F.VON AUTHOR 2 DELFT,C.H.ARROWSMITH,C.BOUNTRA,A.EDWARDS,U.OPPERMANN REVDAT 4 20-DEC-23 3ZPO 1 REMARK LINK REVDAT 3 20-MAY-15 3ZPO 1 JRNL REMARK REVDAT 2 29-JAN-14 3ZPO 1 REMARK HET HETNAM FORMUL REVDAT 2 2 1 LINK SITE HETATM REVDAT 1 29-MAY-13 3ZPO 0 JRNL AUTH L.J.WALPORT,R.J.HOPKINSON,M.VOLLMAR,S.K.MADDEN,C.GILEADI, JRNL AUTH 2 U.OPPERMANN,C.J.SCHOFIELD,C.JOHANSSON JRNL TITL HUMAN UTY(KDM6C) IS A MALE-SPECIFIC NEPISLON-METHYL LYSYL JRNL TITL 2 DEMETHYLASE. JRNL REF J.BIOL.CHEM. V. 289 18302 2014 JRNL REFN ISSN 0021-9258 JRNL PMID 24798337 JRNL DOI 10.1074/JBC.M114.555052 REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.7.0032 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 37.51 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 98.9 REMARK 3 NUMBER OF REFLECTIONS : 77371 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.179 REMARK 3 R VALUE (WORKING SET) : 0.177 REMARK 3 FREE R VALUE : 0.210 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 4068 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.00 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.05 REMARK 3 REFLECTION IN BIN (WORKING SET) : 5570 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 97.56 REMARK 3 BIN R VALUE (WORKING SET) : 0.2380 REMARK 3 BIN FREE R VALUE SET COUNT : 297 REMARK 3 BIN FREE R VALUE : 0.2740 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 7033 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 130 REMARK 3 SOLVENT ATOMS : 541 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 30.80 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -2.03000 REMARK 3 B22 (A**2) : 0.62000 REMARK 3 B33 (A**2) : 1.40000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.149 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.136 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.089 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 6.015 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.953 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.929 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 7460 ; 0.011 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 6969 ; 0.004 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 10167 ; 1.395 ; 1.936 REMARK 3 BOND ANGLES OTHERS (DEGREES): 16016 ; 0.956 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 918 ; 5.810 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 347 ;36.262 ;24.841 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1210 ;13.055 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 30 ;17.769 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1115 ; 0.085 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 8706 ; 0.007 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 1784 ; 0.004 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 3571 ; 1.355 ; 2.037 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 3569 ; 1.354 ; 2.037 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 4466 ; 2.043 ; 3.042 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 3889 ; 1.795 ; 2.262 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 880 A 1189 REMARK 3 ORIGIN FOR THE GROUP (A): -17.8030 -3.9402 24.7323 REMARK 3 T TENSOR REMARK 3 T11: 0.0284 T22: 0.0355 REMARK 3 T33: 0.0430 T12: -0.0086 REMARK 3 T13: -0.0050 T23: -0.0179 REMARK 3 L TENSOR REMARK 3 L11: 0.9745 L22: 0.9192 REMARK 3 L33: 0.8351 L12: -0.0524 REMARK 3 L13: 0.0872 L23: 0.3242 REMARK 3 S TENSOR REMARK 3 S11: 0.0382 S12: -0.0260 S13: 0.0573 REMARK 3 S21: -0.0657 S22: -0.1007 S23: 0.0319 REMARK 3 S31: -0.0265 S32: -0.0875 S33: 0.0625 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1190 A 1285 REMARK 3 ORIGIN FOR THE GROUP (A): 5.2368 -21.4522 17.1439 REMARK 3 T TENSOR REMARK 3 T11: 0.0423 T22: 0.0296 REMARK 3 T33: 0.1119 T12: -0.0206 REMARK 3 T13: 0.0077 T23: -0.0211 REMARK 3 L TENSOR REMARK 3 L11: 3.7801 L22: 1.0268 REMARK 3 L33: 0.8288 L12: -0.9112 REMARK 3 L13: 1.0510 L23: 0.0977 REMARK 3 S TENSOR REMARK 3 S11: 0.1314 S12: 0.1170 S13: -0.2422 REMARK 3 S21: 0.0344 S22: -0.0251 S23: -0.0561 REMARK 3 S31: 0.0242 S32: 0.0270 S33: -0.1062 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1286 A 1345 REMARK 3 ORIGIN FOR THE GROUP (A): 14.0606 -23.5078 22.3632 REMARK 3 T TENSOR REMARK 3 T11: 0.0796 T22: 0.0358 REMARK 3 T33: 0.1334 T12: -0.0325 REMARK 3 T13: -0.0442 T23: 0.0268 REMARK 3 L TENSOR REMARK 3 L11: 6.0672 L22: 1.2603 REMARK 3 L33: 1.6026 L12: 2.2405 REMARK 3 L13: 2.3966 L23: 1.4162 REMARK 3 S TENSOR REMARK 3 S11: 0.2231 S12: -0.0787 S13: -0.3840 REMARK 3 S21: 0.1440 S22: 0.0226 S23: -0.2083 REMARK 3 S31: 0.1518 S32: 0.0424 S33: -0.2457 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 881 B 905 REMARK 3 ORIGIN FOR THE GROUP (A): -51.4661 -42.2794 11.7306 REMARK 3 T TENSOR REMARK 3 T11: 0.1172 T22: 0.1479 REMARK 3 T33: 0.1788 T12: -0.0000 REMARK 3 T13: -0.0668 T23: 0.0402 REMARK 3 L TENSOR REMARK 3 L11: 2.6988 L22: 5.7308 REMARK 3 L33: 2.1139 L12: 1.3701 REMARK 3 L13: 0.2562 L23: 1.4140 REMARK 3 S TENSOR REMARK 3 S11: -0.0139 S12: 0.2623 S13: 0.1464 REMARK 3 S21: -0.1918 S22: -0.0917 S23: 0.7129 REMARK 3 S31: 0.2468 S32: -0.2879 S33: 0.1055 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 906 B 1217 REMARK 3 ORIGIN FOR THE GROUP (A): -37.7655 -49.4805 24.0684 REMARK 3 T TENSOR REMARK 3 T11: 0.0150 T22: 0.0496 REMARK 3 T33: 0.0670 T12: -0.0036 REMARK 3 T13: -0.0259 T23: 0.0054 REMARK 3 L TENSOR REMARK 3 L11: 1.0068 L22: 0.7336 REMARK 3 L33: 0.9449 L12: 0.0513 REMARK 3 L13: -0.2736 L23: -0.4132 REMARK 3 S TENSOR REMARK 3 S11: 0.0618 S12: -0.0192 S13: -0.0953 REMARK 3 S21: 0.0051 S22: 0.0445 S23: 0.0843 REMARK 3 S31: -0.0167 S32: 0.0138 S33: -0.1062 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 1218 B 1344 REMARK 3 ORIGIN FOR THE GROUP (A): -11.8670 -48.0725 3.4405 REMARK 3 T TENSOR REMARK 3 T11: 0.0551 T22: 0.1522 REMARK 3 T33: 0.0325 T12: 0.0492 REMARK 3 T13: -0.0228 T23: -0.0209 REMARK 3 L TENSOR REMARK 3 L11: 3.1870 L22: 1.0935 REMARK 3 L33: 0.7199 L12: -1.3211 REMARK 3 L13: 1.3733 L23: -0.8206 REMARK 3 S TENSOR REMARK 3 S11: 0.1238 S12: 0.3244 S13: -0.0299 REMARK 3 S21: -0.0762 S22: -0.1562 S23: -0.0849 REMARK 3 S31: 0.0626 S32: 0.1133 S33: 0.0324 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. U VALUES WITH TLS ADDED REMARK 4 REMARK 4 3ZPO COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 28-FEB-13. REMARK 100 THE DEPOSITION ID IS D_1290056004. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 16-FEB-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I04-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.92 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 2M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 81514 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 39.830 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 200 DATA REDUNDANCY : 6.900 REMARK 200 R MERGE (I) : 0.11000 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 10.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.04 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.1 REMARK 200 DATA REDUNDANCY IN SHELL : 6.10 REMARK 200 R MERGE FOR SHELL (I) : 0.77000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 3ZLI REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 55.28 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.75 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 15%(W/V) PEG 3350, 0.1M MAGNESIUM REMARK 280 FORMATE REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 45.57900 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 59.74600 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 55.37750 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 59.74600 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 45.57900 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 55.37750 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 877 REMARK 465 LEU A 878 REMARK 465 PRO A 879 REMARK 465 LYS A 1000 REMARK 465 ARG A 1001 REMARK 465 THR A 1002 REMARK 465 GLN A 1003 REMARK 465 HIS A 1004 REMARK 465 LYS A 1005 REMARK 465 ASP A 1006 REMARK 465 HIS A 1007 REMARK 465 SER A 1008 REMARK 465 ASP A 1009 REMARK 465 ASN A 1010 REMARK 465 GLU A 1011 REMARK 465 SER A 1012 REMARK 465 THR A 1013 REMARK 465 SER A 1014 REMARK 465 SER A 1015 REMARK 465 GLU A 1016 REMARK 465 ASN A 1017 REMARK 465 SER A 1018 REMARK 465 GLY A 1019 REMARK 465 ARG A 1020 REMARK 465 ARG A 1021 REMARK 465 ARG A 1022 REMARK 465 SER A 1346 REMARK 465 SER A 1347 REMARK 465 ALA A 1348 REMARK 465 GLU A 1349 REMARK 465 ASN A 1350 REMARK 465 LEU A 1351 REMARK 465 TYR A 1352 REMARK 465 PHE A 1353 REMARK 465 GLN A 1354 REMARK 465 MET B 877 REMARK 465 LEU B 878 REMARK 465 PRO B 879 REMARK 465 LYS B 880 REMARK 465 LYS B 1000 REMARK 465 ARG B 1001 REMARK 465 THR B 1002 REMARK 465 GLN B 1003 REMARK 465 HIS B 1004 REMARK 465 LYS B 1005 REMARK 465 ASP B 1006 REMARK 465 HIS B 1007 REMARK 465 SER B 1008 REMARK 465 ASP B 1009 REMARK 465 ASN B 1010 REMARK 465 GLU B 1011 REMARK 465 SER B 1012 REMARK 465 THR B 1013 REMARK 465 SER B 1014 REMARK 465 SER B 1015 REMARK 465 GLU B 1016 REMARK 465 ASN B 1017 REMARK 465 SER B 1018 REMARK 465 GLY B 1019 REMARK 465 ARG B 1020 REMARK 465 ARG B 1021 REMARK 465 ARG B 1022 REMARK 465 LYS B 1023 REMARK 465 GLY B 1024 REMARK 465 PRO B 1025 REMARK 465 SER B 1345 REMARK 465 SER B 1346 REMARK 465 SER B 1347 REMARK 465 ALA B 1348 REMARK 465 GLU B 1349 REMARK 465 ASN B 1350 REMARK 465 LEU B 1351 REMARK 465 TYR B 1352 REMARK 465 PHE B 1353 REMARK 465 GLN B 1354 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASP A 881 CG OD1 OD2 REMARK 470 LYS A 882 CG CD CE NZ REMARK 470 LYS A 911 CE NZ REMARK 470 LYS A 925 CE NZ REMARK 470 LYS A 934 CD CE NZ REMARK 470 GLU A 971 CG CD OE1 OE2 REMARK 470 GLU A 999 CG CD OE1 OE2 REMARK 470 LYS A1041 CD CE NZ REMARK 470 LYS A1130 CG CD CE NZ REMARK 470 GLU A1149 CD OE1 OE2 REMARK 470 LYS A1229 CD CE NZ REMARK 470 LYS A1234 CD CE NZ REMARK 470 LYS A1248 CE NZ REMARK 470 ASN A1271 CG OD1 ND2 REMARK 470 ASP A1272 CG OD1 OD2 REMARK 470 SER A1345 OG REMARK 470 ASP B 881 CG OD1 OD2 REMARK 470 LYS B 882 CD CE NZ REMARK 470 ASN B 894 CG OD1 ND2 REMARK 470 LYS B 895 CE NZ REMARK 470 PHE B 900 CG CD1 CD2 CE1 CE2 CZ REMARK 470 LYS B 911 CE NZ REMARK 470 LYS B 925 CE NZ REMARK 470 LYS B 934 CD CE NZ REMARK 470 GLU B 938 CD OE1 OE2 REMARK 470 LYS B 965 CD CE NZ REMARK 470 GLU B 971 CG CD OE1 OE2 REMARK 470 ARG B 974 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 999 CG CD OE1 OE2 REMARK 470 LYS B1027 CD CE NZ REMARK 470 LYS B1041 CE NZ REMARK 470 LYS B1234 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD2 ASP B 1307 O HOH B 2247 2.13 REMARK 500 ND2 ASN B 884 O HOH B 2002 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A1156 NE - CZ - NH2 ANGL. DEV. = -3.1 DEGREES REMARK 500 ARG B1156 NE - CZ - NH2 ANGL. DEV. = -3.1 DEGREES REMARK 500 ARG B1226 NE - CZ - NH2 ANGL. DEV. = -3.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 955 -121.66 51.95 REMARK 500 ASP A1272 -2.65 79.66 REMARK 500 ILE A1280 -62.25 -94.90 REMARK 500 ASN A1287 -69.39 72.75 REMARK 500 GLU B 893 -47.76 -133.68 REMARK 500 ALA B 955 -121.24 50.95 REMARK 500 LEU B1037 34.56 -99.80 REMARK 500 ILE B1280 -62.46 -93.57 REMARK 500 ASN B1287 -70.38 74.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A2059 DISTANCE = 6.82 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FE2 A1902 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A1093 NE2 REMARK 620 2 GLU A1095 OE2 88.9 REMARK 620 3 K0I A1900 N3 91.1 173.0 REMARK 620 4 K0I A1900 N4 91.5 96.9 76.1 REMARK 620 5 HOH A2156 O 88.3 89.4 97.6 173.7 REMARK 620 6 HOH A2161 O 176.0 87.2 92.9 90.1 90.5 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A1901 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A1278 SG REMARK 620 2 CYS A1281 SG 107.7 REMARK 620 3 CYS A1305 SG 114.2 112.2 REMARK 620 4 CYS A1308 SG 108.3 109.1 105.2 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FE2 B1901 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B1093 NE2 REMARK 620 2 GLU B1095 OE2 87.4 REMARK 620 3 K0I B1900 N3 91.6 174.0 REMARK 620 4 K0I B1900 N4 91.7 96.5 77.6 REMARK 620 5 HOH B2127 O 89.4 86.9 99.0 176.4 REMARK 620 6 HOH B2134 O 175.6 88.3 92.8 89.7 89.5 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B1902 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B1278 SG REMARK 620 2 CYS B1281 SG 106.8 REMARK 620 3 CYS B1305 SG 113.7 114.8 REMARK 620 4 CYS B1308 SG 105.5 110.1 105.5 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE K0I A 1900 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 1901 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FE2 A 1902 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE K0I B 1900 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FE2 B 1901 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 1902 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 2346 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 2345 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 2347 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 2348 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 2346 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 2349 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 2350 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 2351 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 2352 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 2347 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 2348 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 2349 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 2350 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 2351 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 2352 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 2353 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 2354 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3ZLI RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF JMJC DOMAIN OF HUMAN HISTONE DEMETHYLASE UTY DBREF 3ZPO A 878 1347 UNP O14607 UTY_HUMAN 878 1347 DBREF 3ZPO B 878 1347 UNP O14607 UTY_HUMAN 878 1347 SEQADV 3ZPO MET A 877 UNP O14607 EXPRESSION TAG SEQADV 3ZPO ALA A 1348 UNP O14607 EXPRESSION TAG SEQADV 3ZPO GLU A 1349 UNP O14607 EXPRESSION TAG SEQADV 3ZPO ASN A 1350 UNP O14607 EXPRESSION TAG SEQADV 3ZPO LEU A 1351 UNP O14607 EXPRESSION TAG SEQADV 3ZPO TYR A 1352 UNP O14607 EXPRESSION TAG SEQADV 3ZPO PHE A 1353 UNP O14607 EXPRESSION TAG SEQADV 3ZPO GLN A 1354 UNP O14607 EXPRESSION TAG SEQADV 3ZPO MET B 877 UNP O14607 EXPRESSION TAG SEQADV 3ZPO ALA B 1348 UNP O14607 EXPRESSION TAG SEQADV 3ZPO GLU B 1349 UNP O14607 EXPRESSION TAG SEQADV 3ZPO ASN B 1350 UNP O14607 EXPRESSION TAG SEQADV 3ZPO LEU B 1351 UNP O14607 EXPRESSION TAG SEQADV 3ZPO TYR B 1352 UNP O14607 EXPRESSION TAG SEQADV 3ZPO PHE B 1353 UNP O14607 EXPRESSION TAG SEQADV 3ZPO GLN B 1354 UNP O14607 EXPRESSION TAG SEQRES 1 A 478 MET LEU PRO LYS ASP LYS LEU ASN PRO PRO THR PRO SER SEQRES 2 A 478 ILE TYR LEU GLU ASN LYS ARG ASP ALA PHE PHE PRO PRO SEQRES 3 A 478 LEU HIS GLN PHE CYS THR ASN PRO LYS ASN PRO VAL THR SEQRES 4 A 478 VAL ILE ARG GLY LEU ALA GLY ALA LEU LYS LEU ASP LEU SEQRES 5 A 478 GLY LEU PHE SER THR LYS THR LEU VAL GLU ALA ASN ASN SEQRES 6 A 478 GLU HIS MET VAL GLU VAL ARG THR GLN LEU LEU GLN PRO SEQRES 7 A 478 ALA ASP GLU ASN TRP ASP PRO THR GLY THR LYS LYS ILE SEQRES 8 A 478 TRP ARG CYS GLU SER ASN ARG SER HIS THR THR ILE ALA SEQRES 9 A 478 LYS TYR ALA GLN TYR GLN ALA SER SER PHE GLN GLU SER SEQRES 10 A 478 LEU ARG GLU GLU ASN GLU LYS ARG THR GLN HIS LYS ASP SEQRES 11 A 478 HIS SER ASP ASN GLU SER THR SER SER GLU ASN SER GLY SEQRES 12 A 478 ARG ARG ARG LYS GLY PRO PHE LYS THR ILE LYS PHE GLY SEQRES 13 A 478 THR ASN ILE ASP LEU SER ASP ASN LYS LYS TRP LYS LEU SEQRES 14 A 478 GLN LEU HIS GLU LEU THR LYS LEU PRO ALA PHE ALA ARG SEQRES 15 A 478 VAL VAL SER ALA GLY ASN LEU LEU THR HIS VAL GLY HIS SEQRES 16 A 478 THR ILE LEU GLY MET ASN THR VAL GLN LEU TYR MET LYS SEQRES 17 A 478 VAL PRO GLY SER ARG THR PRO GLY HIS GLN GLU ASN ASN SEQRES 18 A 478 ASN PHE CYS SER VAL ASN ILE ASN ILE GLY PRO GLY ASP SEQRES 19 A 478 CYS GLU TRP PHE VAL VAL PRO GLU ASP TYR TRP GLY VAL SEQRES 20 A 478 LEU ASN ASP PHE CYS GLU LYS ASN ASN LEU ASN PHE LEU SEQRES 21 A 478 MET SER SER TRP TRP PRO ASN LEU GLU ASP LEU TYR GLU SEQRES 22 A 478 ALA ASN VAL PRO VAL TYR ARG PHE ILE GLN ARG PRO GLY SEQRES 23 A 478 ASP LEU VAL TRP ILE ASN ALA GLY THR VAL HIS TRP VAL SEQRES 24 A 478 GLN ALA VAL GLY TRP CYS ASN ASN ILE ALA TRP ASN VAL SEQRES 25 A 478 GLY PRO LEU THR ALA CYS GLN TYR LYS LEU ALA VAL GLU SEQRES 26 A 478 ARG TYR GLU TRP ASN LYS LEU LYS SER VAL LYS SER PRO SEQRES 27 A 478 VAL PRO MET VAL HIS LEU SER TRP ASN MET ALA ARG ASN SEQRES 28 A 478 ILE LYS VAL SER ASP PRO LYS LEU PHE GLU MET ILE LYS SEQRES 29 A 478 TYR CYS LEU LEU LYS ILE LEU LYS GLN TYR GLN THR LEU SEQRES 30 A 478 ARG GLU ALA LEU VAL ALA ALA GLY LYS GLU VAL ILE TRP SEQRES 31 A 478 HIS GLY ARG THR ASN ASP GLU PRO ALA HIS TYR CYS SER SEQRES 32 A 478 ILE CYS GLU VAL GLU VAL PHE ASN LEU LEU PHE VAL THR SEQRES 33 A 478 ASN GLU SER ASN THR GLN LYS THR TYR ILE VAL HIS CYS SEQRES 34 A 478 HIS ASP CYS ALA ARG LYS THR SER LYS SER LEU GLU ASN SEQRES 35 A 478 PHE VAL VAL LEU GLU GLN TYR LYS MET GLU ASP LEU ILE SEQRES 36 A 478 GLN VAL TYR ASP GLN PHE THR LEU ALA LEU SER LEU SER SEQRES 37 A 478 SER SER SER ALA GLU ASN LEU TYR PHE GLN SEQRES 1 B 478 MET LEU PRO LYS ASP LYS LEU ASN PRO PRO THR PRO SER SEQRES 2 B 478 ILE TYR LEU GLU ASN LYS ARG ASP ALA PHE PHE PRO PRO SEQRES 3 B 478 LEU HIS GLN PHE CYS THR ASN PRO LYS ASN PRO VAL THR SEQRES 4 B 478 VAL ILE ARG GLY LEU ALA GLY ALA LEU LYS LEU ASP LEU SEQRES 5 B 478 GLY LEU PHE SER THR LYS THR LEU VAL GLU ALA ASN ASN SEQRES 6 B 478 GLU HIS MET VAL GLU VAL ARG THR GLN LEU LEU GLN PRO SEQRES 7 B 478 ALA ASP GLU ASN TRP ASP PRO THR GLY THR LYS LYS ILE SEQRES 8 B 478 TRP ARG CYS GLU SER ASN ARG SER HIS THR THR ILE ALA SEQRES 9 B 478 LYS TYR ALA GLN TYR GLN ALA SER SER PHE GLN GLU SER SEQRES 10 B 478 LEU ARG GLU GLU ASN GLU LYS ARG THR GLN HIS LYS ASP SEQRES 11 B 478 HIS SER ASP ASN GLU SER THR SER SER GLU ASN SER GLY SEQRES 12 B 478 ARG ARG ARG LYS GLY PRO PHE LYS THR ILE LYS PHE GLY SEQRES 13 B 478 THR ASN ILE ASP LEU SER ASP ASN LYS LYS TRP LYS LEU SEQRES 14 B 478 GLN LEU HIS GLU LEU THR LYS LEU PRO ALA PHE ALA ARG SEQRES 15 B 478 VAL VAL SER ALA GLY ASN LEU LEU THR HIS VAL GLY HIS SEQRES 16 B 478 THR ILE LEU GLY MET ASN THR VAL GLN LEU TYR MET LYS SEQRES 17 B 478 VAL PRO GLY SER ARG THR PRO GLY HIS GLN GLU ASN ASN SEQRES 18 B 478 ASN PHE CYS SER VAL ASN ILE ASN ILE GLY PRO GLY ASP SEQRES 19 B 478 CYS GLU TRP PHE VAL VAL PRO GLU ASP TYR TRP GLY VAL SEQRES 20 B 478 LEU ASN ASP PHE CYS GLU LYS ASN ASN LEU ASN PHE LEU SEQRES 21 B 478 MET SER SER TRP TRP PRO ASN LEU GLU ASP LEU TYR GLU SEQRES 22 B 478 ALA ASN VAL PRO VAL TYR ARG PHE ILE GLN ARG PRO GLY SEQRES 23 B 478 ASP LEU VAL TRP ILE ASN ALA GLY THR VAL HIS TRP VAL SEQRES 24 B 478 GLN ALA VAL GLY TRP CYS ASN ASN ILE ALA TRP ASN VAL SEQRES 25 B 478 GLY PRO LEU THR ALA CYS GLN TYR LYS LEU ALA VAL GLU SEQRES 26 B 478 ARG TYR GLU TRP ASN LYS LEU LYS SER VAL LYS SER PRO SEQRES 27 B 478 VAL PRO MET VAL HIS LEU SER TRP ASN MET ALA ARG ASN SEQRES 28 B 478 ILE LYS VAL SER ASP PRO LYS LEU PHE GLU MET ILE LYS SEQRES 29 B 478 TYR CYS LEU LEU LYS ILE LEU LYS GLN TYR GLN THR LEU SEQRES 30 B 478 ARG GLU ALA LEU VAL ALA ALA GLY LYS GLU VAL ILE TRP SEQRES 31 B 478 HIS GLY ARG THR ASN ASP GLU PRO ALA HIS TYR CYS SER SEQRES 32 B 478 ILE CYS GLU VAL GLU VAL PHE ASN LEU LEU PHE VAL THR SEQRES 33 B 478 ASN GLU SER ASN THR GLN LYS THR TYR ILE VAL HIS CYS SEQRES 34 B 478 HIS ASP CYS ALA ARG LYS THR SER LYS SER LEU GLU ASN SEQRES 35 B 478 PHE VAL VAL LEU GLU GLN TYR LYS MET GLU ASP LEU ILE SEQRES 36 B 478 GLN VAL TYR ASP GLN PHE THR LEU ALA LEU SER LEU SER SEQRES 37 B 478 SER SER SER ALA GLU ASN LEU TYR PHE GLN HET K0I A1900 29 HET ZN A1901 1 HET FE2 A1902 1 HET EDO A2346 4 HET EDO A2347 4 HET EDO A2348 4 HET EDO A2349 4 HET EDO A2350 4 HET EDO A2351 4 HET EDO A2352 4 HET EDO A2353 4 HET EDO A2354 4 HET K0I B1900 29 HET FE2 B1901 1 HET ZN B1902 1 HET EDO B2345 4 HET EDO B2346 4 HET EDO B2347 4 HET EDO B2348 4 HET EDO B2349 4 HET EDO B2350 4 HET EDO B2351 4 HET EDO B2352 4 HETNAM K0I 3-[[2-PYRIDIN-2-YL-6-(1,2,4,5-TETRAHYDRO-3-BENZAZEPIN- HETNAM 2 K0I 3-YL)PYRIMIDIN-4-YL]AMINO]PROPANOIC ACID HETNAM ZN ZINC ION HETNAM FE2 FE (II) ION HETNAM EDO 1,2-ETHANEDIOL HETSYN K0I 3-((6-(4,5-DIHYDRO-1H-BENZO[D]AZEPIN-3(2H)-YL)-2- HETSYN 2 K0I (PYRIDIN-2-YL)PYRIMIDIN-4-YL)AMINO)PROPANOIC ACID HETSYN EDO ETHYLENE GLYCOL FORMUL 3 K0I 2(C22 H23 N5 O2) FORMUL 4 ZN 2(ZN 2+) FORMUL 5 FE2 2(FE 2+) FORMUL 6 EDO 17(C2 H6 O2) FORMUL 26 HOH *541(H2 O) HELIX 1 1 ASN A 894 PHE A 900 1 7 HELIX 2 2 PHE A 900 ASN A 909 1 10 HELIX 3 3 GLY A 919 LEU A 924 1 6 HELIX 4 4 ASP A 927 PHE A 931 5 5 HELIX 5 5 SER A 932 ASN A 940 1 9 HELIX 6 6 ILE A 979 ASN A 998 1 20 HELIX 7 7 TRP A 1043 THR A 1051 1 9 HELIX 8 8 PRO A 1054 ARG A 1058 5 5 HELIX 9 9 ASN A 1064 VAL A 1069 1 6 HELIX 10 10 GLU A 1095 PHE A 1099 5 5 HELIX 11 11 PRO A 1117 ASP A 1119 5 3 HELIX 12 12 TYR A 1120 ASN A 1131 1 12 HELIX 13 13 ASN A 1143 ALA A 1150 1 8 HELIX 14 14 THR A 1192 LYS A 1209 1 18 HELIX 15 15 PRO A 1216 ILE A 1228 1 13 HELIX 16 16 ASP A 1232 ALA A 1260 1 29 HELIX 17 17 ASN A 1293 GLN A 1298 1 6 HELIX 18 18 CYS A 1305 SER A 1313 1 9 HELIX 19 19 LYS A 1326 GLN A 1336 1 11 HELIX 20 20 ASN B 894 PHE B 899 1 6 HELIX 21 21 PHE B 900 ASN B 909 1 10 HELIX 22 22 GLY B 919 LYS B 925 1 7 HELIX 23 23 ASP B 927 PHE B 931 5 5 HELIX 24 24 SER B 932 ASN B 940 1 9 HELIX 25 25 ILE B 979 ASN B 998 1 20 HELIX 26 26 TRP B 1043 THR B 1051 1 9 HELIX 27 27 PRO B 1054 ARG B 1058 5 5 HELIX 28 28 ASN B 1064 VAL B 1069 1 6 HELIX 29 29 GLU B 1095 PHE B 1099 5 5 HELIX 30 30 PRO B 1117 ASP B 1119 5 3 HELIX 31 31 TYR B 1120 ASN B 1131 1 12 HELIX 32 32 ASN B 1143 ALA B 1150 1 8 HELIX 33 33 THR B 1192 LYS B 1209 1 18 HELIX 34 34 PRO B 1216 ILE B 1228 1 13 HELIX 35 35 ASP B 1232 ALA B 1260 1 29 HELIX 36 36 ASN B 1293 GLN B 1298 1 6 HELIX 37 37 CYS B 1305 SER B 1313 1 9 HELIX 38 38 LYS B 1326 PHE B 1337 1 12 SHEET 1 AA 9 SER A 889 TYR A 891 0 SHEET 2 AA 9 VAL A 914 ARG A 918 1 O VAL A 916 N ILE A 890 SHEET 3 AA 9 LEU A1164 ILE A1167 -1 O LEU A1164 N ILE A 917 SHEET 4 AA 9 CYS A1100 PRO A1108 -1 O SER A1101 N ILE A1167 SHEET 5 AA 9 CYS A1181 VAL A1188 -1 O ASN A1182 N ILE A1106 SHEET 6 AA 9 GLN A1080 LYS A1084 -1 O GLN A1080 N ALA A1185 SHEET 7 AA 9 THR A1028 ASP A1036 -1 O GLY A1032 N MET A1083 SHEET 8 AA 9 MET A 944 LEU A 951 -1 O GLU A 946 N THR A1033 SHEET 9 AA 9 ARG A 974 THR A 978 -1 O SER A 975 N VAL A 947 SHEET 1 AB 4 ARG A1089 HIS A1093 0 SHEET 2 AB 4 VAL A1172 ALA A1177 -1 O HIS A1173 N HIS A1093 SHEET 3 AB 4 CYS A1111 VAL A1116 -1 O GLU A1112 N GLN A1176 SHEET 4 AB 4 TYR A1155 GLN A1159 -1 O TYR A1155 N VAL A1115 SHEET 1 AC 3 VAL A1264 TRP A1266 0 SHEET 2 AC 3 PHE A1319 GLU A1323 1 O VAL A1321 N ILE A1265 SHEET 3 AC 3 LEU A1288 THR A1292 -1 O LEU A1289 N LEU A1322 SHEET 1 AD 2 HIS A1276 TYR A1277 0 SHEET 2 AD 2 GLU A1284 VAL A1285 -1 O VAL A1285 N HIS A1276 SHEET 1 BA 9 SER B 889 TYR B 891 0 SHEET 2 BA 9 VAL B 914 ARG B 918 1 O VAL B 916 N ILE B 890 SHEET 3 BA 9 LEU B1164 ILE B1167 -1 O LEU B1164 N ILE B 917 SHEET 4 BA 9 CYS B1100 PRO B1108 -1 O SER B1101 N ILE B1167 SHEET 5 BA 9 CYS B1181 VAL B1188 -1 O ASN B1182 N ILE B1106 SHEET 6 BA 9 GLN B1080 LYS B1084 -1 O GLN B1080 N ALA B1185 SHEET 7 BA 9 THR B1028 ASP B1036 -1 O GLY B1032 N MET B1083 SHEET 8 BA 9 MET B 944 LEU B 951 -1 O GLU B 946 N THR B1033 SHEET 9 BA 9 ARG B 974 THR B 978 -1 O SER B 975 N VAL B 947 SHEET 1 BB 4 ARG B1089 HIS B1093 0 SHEET 2 BB 4 VAL B1172 ALA B1177 -1 O HIS B1173 N HIS B1093 SHEET 3 BB 4 CYS B1111 VAL B1116 -1 O GLU B1112 N GLN B1176 SHEET 4 BB 4 TYR B1155 GLN B1159 -1 O TYR B1155 N VAL B1115 SHEET 1 BC 3 VAL B1264 TRP B1266 0 SHEET 2 BC 3 PHE B1319 GLU B1323 1 O VAL B1321 N ILE B1265 SHEET 3 BC 3 LEU B1288 THR B1292 -1 O LEU B1289 N LEU B1322 SHEET 1 BD 2 HIS B1276 TYR B1277 0 SHEET 2 BD 2 GLU B1284 VAL B1285 -1 O VAL B1285 N HIS B1276 LINK NE2 HIS A1093 FE FE2 A1902 1555 1555 2.27 LINK OE2 GLU A1095 FE FE2 A1902 1555 1555 2.17 LINK SG CYS A1278 ZN ZN A1901 1555 1555 2.19 LINK SG CYS A1281 ZN ZN A1901 1555 1555 2.37 LINK SG CYS A1305 ZN ZN A1901 1555 1555 2.26 LINK SG CYS A1308 ZN ZN A1901 1555 1555 2.39 LINK N3 K0I A1900 FE FE2 A1902 1555 1555 2.26 LINK N4 K0I A1900 FE FE2 A1902 1555 1555 2.14 LINK FE FE2 A1902 O HOH A2156 1555 1555 2.17 LINK FE FE2 A1902 O HOH A2161 1555 1555 2.21 LINK NE2 HIS B1093 FE FE2 B1901 1555 1555 2.28 LINK OE2 GLU B1095 FE FE2 B1901 1555 1555 2.23 LINK SG CYS B1278 ZN ZN B1902 1555 1555 2.30 LINK SG CYS B1281 ZN ZN B1902 1555 1555 2.35 LINK SG CYS B1305 ZN ZN B1902 1555 1555 2.23 LINK SG CYS B1308 ZN ZN B1902 1555 1555 2.39 LINK N3 K0I B1900 FE FE2 B1901 1555 1555 2.22 LINK N4 K0I B1900 FE FE2 B1901 1555 1555 2.14 LINK FE FE2 B1901 O HOH B2127 1555 1555 2.23 LINK FE FE2 B1901 O HOH B2134 1555 1555 2.19 CISPEP 1 GLY A 1024 PRO A 1025 0 6.73 CISPEP 2 GLY A 1107 PRO A 1108 0 8.28 CISPEP 3 GLY B 1107 PRO B 1108 0 6.72 SITE 1 AC1 17 ARG A 948 GLN A 950 THR A1033 TYR A1082 SITE 2 AC1 17 LYS A1084 ARG A1089 THR A1090 PRO A1091 SITE 3 AC1 17 HIS A1093 GLU A1095 ASN A1096 ASN A1103 SITE 4 AC1 17 SER A1139 ASN A1183 FE2 A1902 HOH A2156 SITE 5 AC1 17 HOH A2161 SITE 1 AC2 4 CYS A1278 CYS A1281 CYS A1305 CYS A1308 SITE 1 AC3 5 HIS A1093 GLU A1095 K0I A1900 HOH A2156 SITE 2 AC3 5 HOH A2161 SITE 1 AC4 17 ARG B 948 GLN B 950 THR B1033 TYR B1082 SITE 2 AC4 17 LYS B1084 ARG B1089 THR B1090 PRO B1091 SITE 3 AC4 17 HIS B1093 GLU B1095 ASN B1096 ASN B1103 SITE 4 AC4 17 SER B1139 ASN B1183 FE2 B1901 HOH B2127 SITE 5 AC4 17 HOH B2134 SITE 1 AC5 5 HIS B1093 GLU B1095 K0I B1900 HOH B2127 SITE 2 AC5 5 HOH B2134 SITE 1 AC6 4 CYS B1278 CYS B1281 CYS B1305 CYS B1308 SITE 1 AC7 4 ARG A 918 ARG A1160 ASP A1163 HOH A2035 SITE 1 AC8 3 ILE B 967 TRP B 968 ARG B 969 SITE 1 AC9 6 THR A 908 CYS A1100 ASN A1168 PRO A1190 SITE 2 AC9 6 THR A1192 CYS A1194 SITE 1 BC1 6 PRO A 910 ASN A1168 ALA A1169 CYS A1194 SITE 2 BC1 6 HOH A2173 HOH A2174 SITE 1 BC2 5 LYS A 895 VAL B1123 ASP B1126 PHE B1127 SITE 2 BC2 5 HOH B2157 SITE 1 BC3 6 ASN A 940 ASN A 941 GLU A 942 LYS A1042 SITE 2 BC3 6 HOH A2050 HOH A2055 SITE 1 BC4 8 SER A 932 THR A 933 GLN A 986 PRO A1108 SITE 2 BC4 8 ASN A1182 HOH A2044 HOH A2277 EDO A2351 SITE 1 BC5 6 ALA A 987 PHE A 990 TRP A1180 HOH A2092 SITE 2 BC5 6 HOH A2278 EDO A2350 SITE 1 BC6 4 LYS A1197 MET A1238 CYS A1242 LEU B1343 SITE 1 BC7 6 THR B 908 CYS B1100 ASN B1168 PRO B1190 SITE 2 BC7 6 THR B1192 CYS B1194 SITE 1 BC8 4 GLN B 986 PHE B 990 HOH B2078 EDO B2349 SITE 1 BC9 7 SER B 932 THR B 933 GLN B 986 GLY B1107 SITE 2 BC9 7 PRO B1108 ASN B1182 EDO B2348 SITE 1 CC1 3 GLY B1109 GLY B1179 TRP B1180 SITE 1 CC2 5 THR B 935 GLU B 938 ALA B 939 GLN B1046 SITE 2 CC2 5 HOH B2263 SITE 1 CC3 4 LEU B1136 SER B1138 HOH B2125 HOH B2153 SITE 1 CC4 4 ILE A 967 TRP A 968 ARG A 969 ASN A1131 SITE 1 CC5 4 GLN A1094 LEU A1136 HOH A2157 HOH A2160 CRYST1 91.158 110.755 119.492 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010970 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009029 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008369 0.00000