HEADER LYASE 11-JUN-11 3ZQU TITLE STRUCTURE OF A PROBABLE AROMATIC ACID DECARBOXYLASE COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROBABLE AROMATIC ACID DECARBOXYLASE; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PSEUDOMONAS AERUGINOSA; SOURCE 3 ORGANISM_TAXID: 208964; SOURCE 4 STRAIN: PAO1; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PNIC KEYWDS LYASE EXPDTA X-RAY DIFFRACTION AUTHOR J.KOPEC,R.SCHNELL,G.SCHNEIDER REVDAT 3 20-DEC-23 3ZQU 1 REMARK REVDAT 2 28-MAR-12 3ZQU 1 JRNL REVDAT 1 02-NOV-11 3ZQU 0 JRNL AUTH J.KOPEC,R.SCHNELL,G.SCHNEIDER JRNL TITL STRUCTURE OF PA4019, A PUTATIVE AROMATIC ACID DECARBOXYLASE JRNL TITL 2 FROM PSEUDOMONAS AERUGINOSA JRNL REF ACTA CRYSTALLOGR.,SECT.F V. 67 1184 2011 JRNL REFN ESSN 1744-3091 JRNL PMID 22102023 JRNL DOI 10.1107/S174430911102923X REMARK 2 REMARK 2 RESOLUTION. 1.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0102 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 81.85 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 35844 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.173 REMARK 3 R VALUE (WORKING SET) : 0.171 REMARK 3 FREE R VALUE : 0.195 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1885 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.50 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.54 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2651 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.2720 REMARK 3 BIN FREE R VALUE SET COUNT : 125 REMARK 3 BIN FREE R VALUE : 0.2900 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1546 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 41 REMARK 3 SOLVENT ATOMS : 140 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 21.60 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 15.29 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.065 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.066 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.042 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.110 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.965 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.956 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1674 ; 0.019 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2299 ; 1.928 ; 2.007 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 222 ; 6.187 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 66 ;38.597 ;24.091 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 270 ;12.581 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 12 ;15.715 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 265 ; 0.142 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1270 ; 0.011 ; 0.022 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1060 ; 1.135 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1713 ; 1.838 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 614 ; 2.839 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 578 ; 4.551 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. U VALUES REFINED INDIVIDUALLY REMARK 4 REMARK 4 3ZQU COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 11-JUN-11. REMARK 100 THE DEPOSITION ID IS D_1290048674. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 29-NOV-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID14-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.93300 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 35844 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.500 REMARK 200 RESOLUTION RANGE LOW (A) : 81.850 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 4.400 REMARK 200 R MERGE (I) : 0.07000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.58 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 4.40 REMARK 200 R MERGE FOR SHELL (I) : 0.49000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 1SBZ REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.23 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.37 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.2 M AMMONIUM SULFATE, 200 MM NACL, REMARK 280 AND 100 MM CACODYLATE AT PH 6.3, PH 6.5 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: F 2 3 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 Z,X,Y REMARK 290 6555 Z,-X,-Y REMARK 290 7555 -Z,-X,Y REMARK 290 8555 -Z,X,-Y REMARK 290 9555 Y,Z,X REMARK 290 10555 -Y,Z,-X REMARK 290 11555 Y,-Z,-X REMARK 290 12555 -Y,-Z,X REMARK 290 13555 X,Y+1/2,Z+1/2 REMARK 290 14555 -X,-Y+1/2,Z+1/2 REMARK 290 15555 -X,Y+1/2,-Z+1/2 REMARK 290 16555 X,-Y+1/2,-Z+1/2 REMARK 290 17555 Z,X+1/2,Y+1/2 REMARK 290 18555 Z,-X+1/2,-Y+1/2 REMARK 290 19555 -Z,-X+1/2,Y+1/2 REMARK 290 20555 -Z,X+1/2,-Y+1/2 REMARK 290 21555 Y,Z+1/2,X+1/2 REMARK 290 22555 -Y,Z+1/2,-X+1/2 REMARK 290 23555 Y,-Z+1/2,-X+1/2 REMARK 290 24555 -Y,-Z+1/2,X+1/2 REMARK 290 25555 X+1/2,Y,Z+1/2 REMARK 290 26555 -X+1/2,-Y,Z+1/2 REMARK 290 27555 -X+1/2,Y,-Z+1/2 REMARK 290 28555 X+1/2,-Y,-Z+1/2 REMARK 290 29555 Z+1/2,X,Y+1/2 REMARK 290 30555 Z+1/2,-X,-Y+1/2 REMARK 290 31555 -Z+1/2,-X,Y+1/2 REMARK 290 32555 -Z+1/2,X,-Y+1/2 REMARK 290 33555 Y+1/2,Z,X+1/2 REMARK 290 34555 -Y+1/2,Z,-X+1/2 REMARK 290 35555 Y+1/2,-Z,-X+1/2 REMARK 290 36555 -Y+1/2,-Z,X+1/2 REMARK 290 37555 X+1/2,Y+1/2,Z REMARK 290 38555 -X+1/2,-Y+1/2,Z REMARK 290 39555 -X+1/2,Y+1/2,-Z REMARK 290 40555 X+1/2,-Y+1/2,-Z REMARK 290 41555 Z+1/2,X+1/2,Y REMARK 290 42555 Z+1/2,-X+1/2,-Y REMARK 290 43555 -Z+1/2,-X+1/2,Y REMARK 290 44555 -Z+1/2,X+1/2,-Y REMARK 290 45555 Y+1/2,Z+1/2,X REMARK 290 46555 -Y+1/2,Z+1/2,-X REMARK 290 47555 Y+1/2,-Z+1/2,-X REMARK 290 48555 -Y+1/2,-Z+1/2,X REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 6 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 6 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 7 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 9 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 9 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 9 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 10 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 10 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 12 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 12 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 12 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 13 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 70.88500 REMARK 290 SMTRY3 13 0.000000 0.000000 1.000000 70.88500 REMARK 290 SMTRY1 14 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 14 0.000000 -1.000000 0.000000 70.88500 REMARK 290 SMTRY3 14 0.000000 0.000000 1.000000 70.88500 REMARK 290 SMTRY1 15 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 15 0.000000 1.000000 0.000000 70.88500 REMARK 290 SMTRY3 15 0.000000 0.000000 -1.000000 70.88500 REMARK 290 SMTRY1 16 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 16 0.000000 -1.000000 0.000000 70.88500 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 70.88500 REMARK 290 SMTRY1 17 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 17 1.000000 0.000000 0.000000 70.88500 REMARK 290 SMTRY3 17 0.000000 1.000000 0.000000 70.88500 REMARK 290 SMTRY1 18 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 18 -1.000000 0.000000 0.000000 70.88500 REMARK 290 SMTRY3 18 0.000000 -1.000000 0.000000 70.88500 REMARK 290 SMTRY1 19 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 19 -1.000000 0.000000 0.000000 70.88500 REMARK 290 SMTRY3 19 0.000000 1.000000 0.000000 70.88500 REMARK 290 SMTRY1 20 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 20 1.000000 0.000000 0.000000 70.88500 REMARK 290 SMTRY3 20 0.000000 -1.000000 0.000000 70.88500 REMARK 290 SMTRY1 21 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 21 0.000000 0.000000 1.000000 70.88500 REMARK 290 SMTRY3 21 1.000000 0.000000 0.000000 70.88500 REMARK 290 SMTRY1 22 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 22 0.000000 0.000000 1.000000 70.88500 REMARK 290 SMTRY3 22 -1.000000 0.000000 0.000000 70.88500 REMARK 290 SMTRY1 23 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 23 0.000000 0.000000 -1.000000 70.88500 REMARK 290 SMTRY3 23 -1.000000 0.000000 0.000000 70.88500 REMARK 290 SMTRY1 24 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 24 0.000000 0.000000 -1.000000 70.88500 REMARK 290 SMTRY3 24 1.000000 0.000000 0.000000 70.88500 REMARK 290 SMTRY1 25 1.000000 0.000000 0.000000 70.88500 REMARK 290 SMTRY2 25 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 25 0.000000 0.000000 1.000000 70.88500 REMARK 290 SMTRY1 26 -1.000000 0.000000 0.000000 70.88500 REMARK 290 SMTRY2 26 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 26 0.000000 0.000000 1.000000 70.88500 REMARK 290 SMTRY1 27 -1.000000 0.000000 0.000000 70.88500 REMARK 290 SMTRY2 27 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 27 0.000000 0.000000 -1.000000 70.88500 REMARK 290 SMTRY1 28 1.000000 0.000000 0.000000 70.88500 REMARK 290 SMTRY2 28 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 28 0.000000 0.000000 -1.000000 70.88500 REMARK 290 SMTRY1 29 0.000000 0.000000 1.000000 70.88500 REMARK 290 SMTRY2 29 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 29 0.000000 1.000000 0.000000 70.88500 REMARK 290 SMTRY1 30 0.000000 0.000000 1.000000 70.88500 REMARK 290 SMTRY2 30 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 30 0.000000 -1.000000 0.000000 70.88500 REMARK 290 SMTRY1 31 0.000000 0.000000 -1.000000 70.88500 REMARK 290 SMTRY2 31 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 31 0.000000 1.000000 0.000000 70.88500 REMARK 290 SMTRY1 32 0.000000 0.000000 -1.000000 70.88500 REMARK 290 SMTRY2 32 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 32 0.000000 -1.000000 0.000000 70.88500 REMARK 290 SMTRY1 33 0.000000 1.000000 0.000000 70.88500 REMARK 290 SMTRY2 33 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 33 1.000000 0.000000 0.000000 70.88500 REMARK 290 SMTRY1 34 0.000000 -1.000000 0.000000 70.88500 REMARK 290 SMTRY2 34 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 34 -1.000000 0.000000 0.000000 70.88500 REMARK 290 SMTRY1 35 0.000000 1.000000 0.000000 70.88500 REMARK 290 SMTRY2 35 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 35 -1.000000 0.000000 0.000000 70.88500 REMARK 290 SMTRY1 36 0.000000 -1.000000 0.000000 70.88500 REMARK 290 SMTRY2 36 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 36 1.000000 0.000000 0.000000 70.88500 REMARK 290 SMTRY1 37 1.000000 0.000000 0.000000 70.88500 REMARK 290 SMTRY2 37 0.000000 1.000000 0.000000 70.88500 REMARK 290 SMTRY3 37 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 38 -1.000000 0.000000 0.000000 70.88500 REMARK 290 SMTRY2 38 0.000000 -1.000000 0.000000 70.88500 REMARK 290 SMTRY3 38 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 39 -1.000000 0.000000 0.000000 70.88500 REMARK 290 SMTRY2 39 0.000000 1.000000 0.000000 70.88500 REMARK 290 SMTRY3 39 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 40 1.000000 0.000000 0.000000 70.88500 REMARK 290 SMTRY2 40 0.000000 -1.000000 0.000000 70.88500 REMARK 290 SMTRY3 40 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 41 0.000000 0.000000 1.000000 70.88500 REMARK 290 SMTRY2 41 1.000000 0.000000 0.000000 70.88500 REMARK 290 SMTRY3 41 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 42 0.000000 0.000000 1.000000 70.88500 REMARK 290 SMTRY2 42 -1.000000 0.000000 0.000000 70.88500 REMARK 290 SMTRY3 42 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 43 0.000000 0.000000 -1.000000 70.88500 REMARK 290 SMTRY2 43 -1.000000 0.000000 0.000000 70.88500 REMARK 290 SMTRY3 43 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 44 0.000000 0.000000 -1.000000 70.88500 REMARK 290 SMTRY2 44 1.000000 0.000000 0.000000 70.88500 REMARK 290 SMTRY3 44 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 45 0.000000 1.000000 0.000000 70.88500 REMARK 290 SMTRY2 45 0.000000 0.000000 1.000000 70.88500 REMARK 290 SMTRY3 45 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 46 0.000000 -1.000000 0.000000 70.88500 REMARK 290 SMTRY2 46 0.000000 0.000000 1.000000 70.88500 REMARK 290 SMTRY3 46 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 47 0.000000 1.000000 0.000000 70.88500 REMARK 290 SMTRY2 47 0.000000 0.000000 -1.000000 70.88500 REMARK 290 SMTRY3 47 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 48 0.000000 -1.000000 0.000000 70.88500 REMARK 290 SMTRY2 48 0.000000 0.000000 -1.000000 70.88500 REMARK 290 SMTRY3 48 1.000000 0.000000 0.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DODECAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DODECAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 70080 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 68300 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -739.5 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT2 2 1.000000 0.000000 0.000000 70.88500 REMARK 350 BIOMT3 2 0.000000 1.000000 0.000000 -70.88500 REMARK 350 BIOMT1 3 0.000000 1.000000 0.000000 -70.88500 REMARK 350 BIOMT2 3 0.000000 0.000000 1.000000 70.88500 REMARK 350 BIOMT3 3 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT1 4 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT2 4 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT3 4 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT1 5 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT2 5 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 5 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT1 6 -1.000000 0.000000 0.000000 -70.88500 REMARK 350 BIOMT2 6 0.000000 -1.000000 0.000000 70.88500 REMARK 350 BIOMT3 6 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 7 -1.000000 0.000000 0.000000 -70.88500 REMARK 350 BIOMT2 7 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 7 0.000000 0.000000 -1.000000 -70.88500 REMARK 350 BIOMT1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT2 8 0.000000 0.000000 1.000000 70.88500 REMARK 350 BIOMT3 8 -1.000000 0.000000 0.000000 -70.88500 REMARK 350 BIOMT1 9 0.000000 0.000000 -1.000000 -70.88500 REMARK 350 BIOMT2 9 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 9 0.000000 1.000000 0.000000 -70.88500 REMARK 350 BIOMT1 10 0.000000 0.000000 -1.000000 -70.88500 REMARK 350 BIOMT2 10 1.000000 0.000000 0.000000 70.88500 REMARK 350 BIOMT3 10 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT1 11 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 11 0.000000 -1.000000 0.000000 70.88500 REMARK 350 BIOMT3 11 0.000000 0.000000 -1.000000 -70.88500 REMARK 350 BIOMT1 12 0.000000 1.000000 0.000000 -70.88500 REMARK 350 BIOMT2 12 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT3 12 -1.000000 0.000000 0.000000 -70.88500 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A2071 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ASP A 208 REMARK 465 GLU A 209 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 SER A 207 OG REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 2112 O HOH A 2120 1.19 REMARK 500 O HOH A 2079 O HOH A 2090 1.48 REMARK 500 O HOH A 2066 O HOH A 2067 1.58 REMARK 500 O1 SO4 A 1209 O HOH A 2112 1.59 REMARK 500 O HOH A 2050 O HOH A 2051 1.69 REMARK 500 O HOH A 2081 O HOH A 2089 1.82 REMARK 500 O HOH A 2081 O HOH A 2082 1.86 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 2080 O HOH A 2095 31454 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 131 NE - CZ - NH1 ANGL. DEV. = 7.0 DEGREES REMARK 500 ARG A 131 NE - CZ - NH1 ANGL. DEV. = 3.6 DEGREES REMARK 500 ARG A 131 NE - CZ - NH2 ANGL. DEV. = -4.7 DEGREES REMARK 500 ARG A 131 NE - CZ - NH2 ANGL. DEV. = -4.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 VAL A 137 78.34 -117.04 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 VAL A 206 SER A 207 140.74 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FNR A 1208 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 1209 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 1210 DBREF 3ZQU A 1 209 UNP Q9HX08 PAAD_PSEAE 1 209 SEQRES 1 A 209 MET SER GLY PRO GLU ARG ILE THR LEU ALA MET THR GLY SEQRES 2 A 209 ALA SER GLY ALA GLN TYR GLY LEU ARG LEU LEU ASP CYS SEQRES 3 A 209 LEU VAL GLN GLU GLU ARG GLU VAL HIS PHE LEU ILE SER SEQRES 4 A 209 LYS ALA ALA GLN LEU VAL MET ALA THR GLU THR ASP VAL SEQRES 5 A 209 ALA LEU PRO ALA LYS PRO GLN ALA MET GLN ALA PHE LEU SEQRES 6 A 209 THR GLU TYR CYS GLY ALA ALA ALA GLY GLN ILE ARG VAL SEQRES 7 A 209 PHE GLY GLN ASN ASP TRP MET ALA PRO PRO ALA SER GLY SEQRES 8 A 209 SER SER ALA PRO ASN ALA MET VAL ILE CYS PRO CYS SER SEQRES 9 A 209 THR GLY THR LEU SER ALA VAL ALA THR GLY ALA CYS ASN SEQRES 10 A 209 ASN LEU ILE GLU ARG ALA ALA ASP VAL ALA LEU LYS GLU SEQRES 11 A 209 ARG ARG PRO LEU VAL LEU VAL PRO ARG GLU ALA PRO PHE SEQRES 12 A 209 SER SER ILE HIS LEU GLU ASN MET LEU LYS LEU SER ASN SEQRES 13 A 209 LEU GLY ALA VAL ILE LEU PRO ALA ALA PRO GLY PHE TYR SEQRES 14 A 209 HIS GLN PRO GLN SER VAL GLU ASP LEU VAL ASP PHE VAL SEQRES 15 A 209 VAL ALA ARG ILE LEU ASN THR LEU GLY ILE PRO GLN ASP SEQRES 16 A 209 MET LEU PRO ARG TRP GLY GLU GLN HIS LEU VAL SER ASP SEQRES 17 A 209 GLU HET FNR A1208 31 HET SO4 A1209 5 HET SO4 A1210 5 HETNAM FNR 1-DEOXY-1-(7,8-DIMETHYL-2,4-DIOXO-3,4-DIHYDRO-2H- HETNAM 2 FNR BENZO[G]PTERIDIN-1-ID-10(5H)-YL)-5-O-PHOSPHONATO-D- HETNAM 3 FNR RIBITOL HETNAM SO4 SULFATE ION HETSYN FNR TWO ELECTRON REDUCED FLAVIN MONONUCLEOTIDE FORMUL 2 FNR C17 H23 N4 O9 P FORMUL 3 SO4 2(O4 S 2-) FORMUL 5 HOH *140(H2 O) HELIX 1 1 GLY A 16 GLU A 30 1 15 HELIX 2 2 SER A 39 THR A 50 1 12 HELIX 3 3 LYS A 57 GLY A 70 1 14 HELIX 4 4 ALA A 86 SER A 90 5 5 HELIX 5 5 SER A 104 GLY A 114 1 11 HELIX 6 6 ASN A 118 ARG A 131 1 14 HELIX 7 7 SER A 144 GLY A 158 1 15 HELIX 8 8 SER A 174 GLY A 191 1 18 SHEET 1 AA 6 ILE A 76 VAL A 78 0 SHEET 2 AA 6 GLU A 33 ILE A 38 1 O VAL A 34 N ARG A 77 SHEET 3 AA 6 ARG A 6 MET A 11 1 O ILE A 7 N HIS A 35 SHEET 4 AA 6 ALA A 97 CYS A 103 1 O ALA A 97 N THR A 8 SHEET 5 AA 6 LEU A 134 PRO A 138 1 O VAL A 135 N ILE A 100 SHEET 6 AA 6 VAL A 160 ILE A 161 1 O VAL A 160 N LEU A 136 CISPEP 1 CYS A 101 PRO A 102 0 -8.50 CISPEP 2 ALA A 141 PRO A 142 0 -12.92 SITE 1 AC1 19 THR A 12 GLY A 13 ALA A 14 SER A 15 SITE 2 AC1 19 SER A 39 ALA A 41 LEU A 44 VAL A 45 SITE 3 AC1 19 TRP A 84 SER A 104 THR A 105 THR A 107 SITE 4 AC1 19 CYS A 116 ARG A 122 ARG A 139 HOH A2026 SITE 5 AC1 19 HOH A2063 HOH A2067 HOH A2136 SITE 1 AC2 12 SER A 90 GLY A 91 ARG A 122 LYS A 129 SITE 2 AC2 12 ARG A 139 GLU A 140 TYR A 169 ARG A 185 SITE 3 AC2 12 HOH A2112 HOH A2120 HOH A2137 HOH A2138 SITE 1 AC3 5 SER A 39 LYS A 40 GLN A 81 ASN A 118 SITE 2 AC3 5 HOH A2026 CRYST1 141.770 141.770 141.770 90.00 90.00 90.00 F 2 3 48 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007054 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007054 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007054 0.00000