data_3ZVN # _entry.id 3ZVN # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.383 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3ZVN pdb_00003zvn 10.2210/pdb3zvn/pdb PDBE EBI-49161 ? ? WWPDB D_1290049161 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.content_type _pdbx_database_related.details PDB 3ZVL unspecified ;THE STRUCTURAL BASIS FOR SUBSTRATE RECOGNITION BY MAMMALIAN POLYNUCLEOTIDE KINASE 3' PHOSPHATASE ; PDB 1UJX unspecified ;THE FORKHEAD ASSOCIATED (FHA) DOMAIN LIKE STRUCTURE FROMMOUSE POLYNUCLEOTIDE KINASE 3'-PHOSPHATASE ; PDB 1YJ5 unspecified 'MOLECULAR ARCHITECTURE OF MAMMALIAN POLYNUCLEOTIDE KINASE, A DNA REPAIR ENZYME' PDB 1YJM unspecified 'CRYSTAL STRUCTURE OF THE FHA DOMAIN OF MOUSE POLYNUCLEOTIDEKINASE IN COMPLEX WITH AN XRCC4-DERIVED PHOSPHOPEPTIDE.' PDB 3ZVM unspecified ;THE STRUCTURAL BASIS FOR SUBSTRATE RECOGNITION BY MAMMALIAN POLYNUCLEOTIDE KINASE 3' PHOSPHATASE ; # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3ZVN _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 2011-07-25 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Garces, F.' 1 ? 'Pearl, L.H.' 2 ? 'Oliver, A.W.' 3 ? # _citation.id primary _citation.title ;The structural basis for substrate recognition by mammalian polynucleotide kinase 3' phosphatase. ; _citation.journal_abbrev 'Mol. Cell' _citation.journal_volume 44 _citation.page_first 385 _citation.page_last 396 _citation.year 2011 _citation.journal_id_ASTM MOCEFL _citation.country US _citation.journal_id_ISSN 1097-4164 _citation.journal_id_CSD 2168 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 22055185 _citation.pdbx_database_id_DOI 10.1016/j.molcel.2011.08.036 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Garces, F.' 1 ? primary 'Pearl, L.H.' 2 ? primary 'Oliver, A.W.' 3 ? # _cell.entry_id 3ZVN _cell.length_a 69.270 _cell.length_b 72.990 _cell.length_c 114.440 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 20 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3ZVN _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'BIFUNCTIONAL POLYNUCLEOTIDE PHOSPHATASE/KINASE' 45947.242 1 '3.1.3.32, 2.7.1.78' YES ;POLYNUCLEOTIDE 3'-PHOSPHATASE AND POLYNUCLEOTIDE 5'-HYDROXYL-KINASE DOMAINS, RESIDUES 111-522 ; ? 2 polymer syn "5'-D(*GP*TP*CP*AP*CP)-3'" 1480.012 5 ? ? ? ? 3 non-polymer syn 'MANGANESE (II) ION' 54.938 1 ? ? ? ? 4 non-polymer syn GLYCEROL 92.094 2 ? ? ? ? 5 non-polymer syn "ADENOSINE-5'-DIPHOSPHATE" 427.201 1 ? ? ? ? 6 water nat water 18.015 253 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name ;DNA 5'-KINASE/3'-PHOSPHATASE, POLYNUCLEOTIDE KINASE-3'-PHOSPHATASE, PNKP ; # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no yes ;GPHMTSGSQPDAPPDTPGDPEEGEDTEPQKKRVRKSSLGWESLKKLLVFTASGVKPQGKVAAFNLDGTLITTRSGKVFPT SPSDWRILYPEIPKKLQELAAEGYKLVIFTNQMGIGRGKLPAEVFKGKVEAVLEKLGVPFQVLVATHAGLNRKPVSGMWD HLQEQANEGIPISVEDSVFVGDAAGRLANWAPGRKKKDFSCADRLFALNVGLPFATPEEFFLKWPAARFELPAFDPRTIS SAGPLYLPESSSLLSPNPEVVVAVGFPGAGKSTFIQEHLVSAGYVHVNRDTLGSWQRCVSSCQAALRQGKRVVIDNTNPD VPSRARYIQCAKDAGVPCRCFNF(CSX)ATIEQARHNNRFREMTDPSHAPVSDMVMFSYRKQFEPPTLAEGFLEILEIPF RLQEHLDPALQRLYRQFSEG ; ;GPHMTSGSQPDAPPDTPGDPEEGEDTEPQKKRVRKSSLGWESLKKLLVFTASGVKPQGKVAAFNLDGTLITTRSGKVFPT SPSDWRILYPEIPKKLQELAAEGYKLVIFTNQMGIGRGKLPAEVFKGKVEAVLEKLGVPFQVLVATHAGLNRKPVSGMWD HLQEQANEGIPISVEDSVFVGDAAGRLANWAPGRKKKDFSCADRLFALNVGLPFATPEEFFLKWPAARFELPAFDPRTIS SAGPLYLPESSSLLSPNPEVVVAVGFPGAGKSTFIQEHLVSAGYVHVNRDTLGSWQRCVSSCQAALRQGKRVVIDNTNPD VPSRARYIQCAKDAGVPCRCFNFCATIEQARHNNRFREMTDPSHAPVSDMVMFSYRKQFEPPTLAEGFLEILEIPFRLQE HLDPALQRLYRQFSEG ; A ? 2 polydeoxyribonucleotide no no '(DG)(DT)(DC)(DA)(DC)' GTCAC E,F,G,H,I ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 PRO n 1 3 HIS n 1 4 MET n 1 5 THR n 1 6 SER n 1 7 GLY n 1 8 SER n 1 9 GLN n 1 10 PRO n 1 11 ASP n 1 12 ALA n 1 13 PRO n 1 14 PRO n 1 15 ASP n 1 16 THR n 1 17 PRO n 1 18 GLY n 1 19 ASP n 1 20 PRO n 1 21 GLU n 1 22 GLU n 1 23 GLY n 1 24 GLU n 1 25 ASP n 1 26 THR n 1 27 GLU n 1 28 PRO n 1 29 GLN n 1 30 LYS n 1 31 LYS n 1 32 ARG n 1 33 VAL n 1 34 ARG n 1 35 LYS n 1 36 SER n 1 37 SER n 1 38 LEU n 1 39 GLY n 1 40 TRP n 1 41 GLU n 1 42 SER n 1 43 LEU n 1 44 LYS n 1 45 LYS n 1 46 LEU n 1 47 LEU n 1 48 VAL n 1 49 PHE n 1 50 THR n 1 51 ALA n 1 52 SER n 1 53 GLY n 1 54 VAL n 1 55 LYS n 1 56 PRO n 1 57 GLN n 1 58 GLY n 1 59 LYS n 1 60 VAL n 1 61 ALA n 1 62 ALA n 1 63 PHE n 1 64 ASN n 1 65 LEU n 1 66 ASP n 1 67 GLY n 1 68 THR n 1 69 LEU n 1 70 ILE n 1 71 THR n 1 72 THR n 1 73 ARG n 1 74 SER n 1 75 GLY n 1 76 LYS n 1 77 VAL n 1 78 PHE n 1 79 PRO n 1 80 THR n 1 81 SER n 1 82 PRO n 1 83 SER n 1 84 ASP n 1 85 TRP n 1 86 ARG n 1 87 ILE n 1 88 LEU n 1 89 TYR n 1 90 PRO n 1 91 GLU n 1 92 ILE n 1 93 PRO n 1 94 LYS n 1 95 LYS n 1 96 LEU n 1 97 GLN n 1 98 GLU n 1 99 LEU n 1 100 ALA n 1 101 ALA n 1 102 GLU n 1 103 GLY n 1 104 TYR n 1 105 LYS n 1 106 LEU n 1 107 VAL n 1 108 ILE n 1 109 PHE n 1 110 THR n 1 111 ASN n 1 112 GLN n 1 113 MET n 1 114 GLY n 1 115 ILE n 1 116 GLY n 1 117 ARG n 1 118 GLY n 1 119 LYS n 1 120 LEU n 1 121 PRO n 1 122 ALA n 1 123 GLU n 1 124 VAL n 1 125 PHE n 1 126 LYS n 1 127 GLY n 1 128 LYS n 1 129 VAL n 1 130 GLU n 1 131 ALA n 1 132 VAL n 1 133 LEU n 1 134 GLU n 1 135 LYS n 1 136 LEU n 1 137 GLY n 1 138 VAL n 1 139 PRO n 1 140 PHE n 1 141 GLN n 1 142 VAL n 1 143 LEU n 1 144 VAL n 1 145 ALA n 1 146 THR n 1 147 HIS n 1 148 ALA n 1 149 GLY n 1 150 LEU n 1 151 ASN n 1 152 ARG n 1 153 LYS n 1 154 PRO n 1 155 VAL n 1 156 SER n 1 157 GLY n 1 158 MET n 1 159 TRP n 1 160 ASP n 1 161 HIS n 1 162 LEU n 1 163 GLN n 1 164 GLU n 1 165 GLN n 1 166 ALA n 1 167 ASN n 1 168 GLU n 1 169 GLY n 1 170 ILE n 1 171 PRO n 1 172 ILE n 1 173 SER n 1 174 VAL n 1 175 GLU n 1 176 ASP n 1 177 SER n 1 178 VAL n 1 179 PHE n 1 180 VAL n 1 181 GLY n 1 182 ASP n 1 183 ALA n 1 184 ALA n 1 185 GLY n 1 186 ARG n 1 187 LEU n 1 188 ALA n 1 189 ASN n 1 190 TRP n 1 191 ALA n 1 192 PRO n 1 193 GLY n 1 194 ARG n 1 195 LYS n 1 196 LYS n 1 197 LYS n 1 198 ASP n 1 199 PHE n 1 200 SER n 1 201 CYS n 1 202 ALA n 1 203 ASP n 1 204 ARG n 1 205 LEU n 1 206 PHE n 1 207 ALA n 1 208 LEU n 1 209 ASN n 1 210 VAL n 1 211 GLY n 1 212 LEU n 1 213 PRO n 1 214 PHE n 1 215 ALA n 1 216 THR n 1 217 PRO n 1 218 GLU n 1 219 GLU n 1 220 PHE n 1 221 PHE n 1 222 LEU n 1 223 LYS n 1 224 TRP n 1 225 PRO n 1 226 ALA n 1 227 ALA n 1 228 ARG n 1 229 PHE n 1 230 GLU n 1 231 LEU n 1 232 PRO n 1 233 ALA n 1 234 PHE n 1 235 ASP n 1 236 PRO n 1 237 ARG n 1 238 THR n 1 239 ILE n 1 240 SER n 1 241 SER n 1 242 ALA n 1 243 GLY n 1 244 PRO n 1 245 LEU n 1 246 TYR n 1 247 LEU n 1 248 PRO n 1 249 GLU n 1 250 SER n 1 251 SER n 1 252 SER n 1 253 LEU n 1 254 LEU n 1 255 SER n 1 256 PRO n 1 257 ASN n 1 258 PRO n 1 259 GLU n 1 260 VAL n 1 261 VAL n 1 262 VAL n 1 263 ALA n 1 264 VAL n 1 265 GLY n 1 266 PHE n 1 267 PRO n 1 268 GLY n 1 269 ALA n 1 270 GLY n 1 271 LYS n 1 272 SER n 1 273 THR n 1 274 PHE n 1 275 ILE n 1 276 GLN n 1 277 GLU n 1 278 HIS n 1 279 LEU n 1 280 VAL n 1 281 SER n 1 282 ALA n 1 283 GLY n 1 284 TYR n 1 285 VAL n 1 286 HIS n 1 287 VAL n 1 288 ASN n 1 289 ARG n 1 290 ASP n 1 291 THR n 1 292 LEU n 1 293 GLY n 1 294 SER n 1 295 TRP n 1 296 GLN n 1 297 ARG n 1 298 CYS n 1 299 VAL n 1 300 SER n 1 301 SER n 1 302 CYS n 1 303 GLN n 1 304 ALA n 1 305 ALA n 1 306 LEU n 1 307 ARG n 1 308 GLN n 1 309 GLY n 1 310 LYS n 1 311 ARG n 1 312 VAL n 1 313 VAL n 1 314 ILE n 1 315 ASP n 1 316 ASN n 1 317 THR n 1 318 ASN n 1 319 PRO n 1 320 ASP n 1 321 VAL n 1 322 PRO n 1 323 SER n 1 324 ARG n 1 325 ALA n 1 326 ARG n 1 327 TYR n 1 328 ILE n 1 329 GLN n 1 330 CYS n 1 331 ALA n 1 332 LYS n 1 333 ASP n 1 334 ALA n 1 335 GLY n 1 336 VAL n 1 337 PRO n 1 338 CYS n 1 339 ARG n 1 340 CYS n 1 341 PHE n 1 342 ASN n 1 343 PHE n 1 344 CSX n 1 345 ALA n 1 346 THR n 1 347 ILE n 1 348 GLU n 1 349 GLN n 1 350 ALA n 1 351 ARG n 1 352 HIS n 1 353 ASN n 1 354 ASN n 1 355 ARG n 1 356 PHE n 1 357 ARG n 1 358 GLU n 1 359 MET n 1 360 THR n 1 361 ASP n 1 362 PRO n 1 363 SER n 1 364 HIS n 1 365 ALA n 1 366 PRO n 1 367 VAL n 1 368 SER n 1 369 ASP n 1 370 MET n 1 371 VAL n 1 372 MET n 1 373 PHE n 1 374 SER n 1 375 TYR n 1 376 ARG n 1 377 LYS n 1 378 GLN n 1 379 PHE n 1 380 GLU n 1 381 PRO n 1 382 PRO n 1 383 THR n 1 384 LEU n 1 385 ALA n 1 386 GLU n 1 387 GLY n 1 388 PHE n 1 389 LEU n 1 390 GLU n 1 391 ILE n 1 392 LEU n 1 393 GLU n 1 394 ILE n 1 395 PRO n 1 396 PHE n 1 397 ARG n 1 398 LEU n 1 399 GLN n 1 400 GLU n 1 401 HIS n 1 402 LEU n 1 403 ASP n 1 404 PRO n 1 405 ALA n 1 406 LEU n 1 407 GLN n 1 408 ARG n 1 409 LEU n 1 410 TYR n 1 411 ARG n 1 412 GLN n 1 413 PHE n 1 414 SER n 1 415 GLU n 1 416 GLY n 2 1 DG n 2 2 DT n 2 3 DC n 2 4 DA n 2 5 DC n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name 'house mouse' _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Mus musculus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 10090 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant 'ROSETTA2 PLYSS' _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector PTWO-E _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _pdbx_entity_src_syn.entity_id 2 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific 'synthetic construct' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 32630 _pdbx_entity_src_syn.details ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform 1 UNP PNKP_MOUSE 1 ? ? Q9JLV6 ? 2 PDB 3ZVN 2 ? ? 3ZVN ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3ZVN A 5 ? 416 ? Q9JLV6 111 ? 522 ? 111 522 2 2 3ZVN E 1 ? 5 ? 3ZVN 1 ? 5 ? 1 5 3 2 3ZVN F 1 ? 5 ? 3ZVN 1 ? 5 ? 1 5 4 2 3ZVN G 1 ? 5 ? 3ZVN 1 ? 5 ? 1 5 5 2 3ZVN H 1 ? 5 ? 3ZVN 1 ? 5 ? 1 5 6 2 3ZVN I 1 ? 5 ? 3ZVN 1 ? 5 ? 1 5 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3ZVN GLY A 1 ? UNP Q9JLV6 ? ? 'expression tag' 107 1 1 3ZVN PRO A 2 ? UNP Q9JLV6 ? ? 'expression tag' 108 2 1 3ZVN HIS A 3 ? UNP Q9JLV6 ? ? 'expression tag' 109 3 1 3ZVN MET A 4 ? UNP Q9JLV6 ? ? 'expression tag' 110 4 1 3ZVN ASN A 64 ? UNP Q9JLV6 ASP 170 'engineered mutation' 170 5 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ADP non-polymer n "ADENOSINE-5'-DIPHOSPHATE" ? 'C10 H15 N5 O10 P2' 427.201 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CSX 'L-peptide linking' n 'S-OXY CYSTEINE' ? 'C3 H7 N O3 S' 137.158 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MN non-polymer . 'MANGANESE (II) ION' ? 'Mn 2' 54.938 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 3ZVN _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.32 _exptl_crystal.density_percent_sol 47 _exptl_crystal.description NONE # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details '0.1 M BIS TRIS PH 5.5, 0.1 M AMMONIUM ACETATE, 17 % (W/V) PEG 10000' # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC CCD' _diffrn_detector.pdbx_collection_date 2011-02-14 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9795 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'DIAMOND BEAMLINE I02' _diffrn_source.pdbx_synchrotron_site Diamond _diffrn_source.pdbx_synchrotron_beamline I02 _diffrn_source.pdbx_wavelength 0.9795 _diffrn_source.pdbx_wavelength_list ? # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 3ZVN _reflns.observed_criterion_sigma_I 0.0 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 36.50 _reflns.d_resolution_high 2.15 _reflns.number_obs 28753 _reflns.number_all ? _reflns.percent_possible_obs 89.2 _reflns.pdbx_Rmerge_I_obs 0.11 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 8.50 _reflns.B_iso_Wilson_estimate 32.63 _reflns.pdbx_redundancy 4.3 # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 2.15 _reflns_shell.d_res_low 2.27 _reflns_shell.percent_possible_all 92.7 _reflns_shell.Rmerge_I_obs 0.66 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 2.30 _reflns_shell.pdbx_redundancy 4.4 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 3ZVN _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 28753 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.00 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 36.495 _refine.ls_d_res_high 2.150 _refine.ls_percent_reflns_obs 89.15 _refine.ls_R_factor_obs 0.2082 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.2050 _refine.ls_R_factor_R_free 0.2689 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.2 _refine.ls_number_reflns_R_free 1484 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] -11.5196 _refine.aniso_B[2][2] -12.2594 _refine.aniso_B[3][3] 23.7790 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] 0.0000 _refine.aniso_B[2][3] 0.0000 _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_ksol 0.380 _refine.solvent_model_param_bsol 62.442 _refine.pdbx_solvent_vdw_probe_radii 1.00 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.72 _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model 'PDB ENTRY 1YJ5' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.53 _refine.pdbx_overall_phase_error 26.97 _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2904 _refine_hist.pdbx_number_atoms_nucleic_acid 486 _refine_hist.pdbx_number_atoms_ligand 40 _refine_hist.number_atoms_solvent 253 _refine_hist.number_atoms_total 3683 _refine_hist.d_res_high 2.150 _refine_hist.d_res_low 36.495 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function f_bond_d 0.007 ? ? 3565 'X-RAY DIFFRACTION' ? f_angle_d 1.298 ? ? 4945 'X-RAY DIFFRACTION' ? f_dihedral_angle_d 19.598 ? ? 1336 'X-RAY DIFFRACTION' ? f_chiral_restr 0.069 ? ? 536 'X-RAY DIFFRACTION' ? f_plane_restr 0.004 ? ? 562 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all 'X-RAY DIFFRACTION' . 2.1500 2.2194 2483 0.2944 92.00 0.3298 . . 141 . . 'X-RAY DIFFRACTION' . 2.2194 2.2987 2528 0.2610 92.00 0.2781 . . 133 . . 'X-RAY DIFFRACTION' . 2.2987 2.3907 2509 0.2360 92.00 0.2731 . . 133 . . 'X-RAY DIFFRACTION' . 2.3907 2.4995 2509 0.2293 92.00 0.3040 . . 129 . . 'X-RAY DIFFRACTION' . 2.4995 2.6312 2504 0.2266 91.00 0.3018 . . 138 . . 'X-RAY DIFFRACTION' . 2.6312 2.7960 2508 0.2165 91.00 0.2955 . . 133 . . 'X-RAY DIFFRACTION' . 2.7960 3.0118 2491 0.2108 90.00 0.2582 . . 137 . . 'X-RAY DIFFRACTION' . 3.0118 3.3147 2493 0.1868 90.00 0.2809 . . 126 . . 'X-RAY DIFFRACTION' . 3.3147 3.7940 2466 0.1816 88.00 0.2851 . . 139 . . 'X-RAY DIFFRACTION' . 3.7940 4.7783 2438 0.1718 86.00 0.2375 . . 136 . . 'X-RAY DIFFRACTION' . 4.7783 36.5002 2340 0.2110 79.00 0.2437 . . 139 . . # _struct.entry_id 3ZVN _struct.title ;The structural basis for substrate recognition by mammalian polynucleotide kinase 3' phosphatase ; _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3ZVN _struct_keywords.pdbx_keywords HYDROLASE/TRANSFERASE/DNA _struct_keywords.text 'HYDROLASE-TRANSFERASE-DNA COMPLEX, BASE EXCISION REPAIR, BER, NON-HOMOLOGOUS END-JOINING, NHEJ, DNA REPAIR, CANCER' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 2 ? E N N 2 ? F N N 2 ? G N N 3 ? H N N 4 ? I N N 5 ? J N N 4 ? K N N 6 ? L N N 6 ? M N N 6 ? N N N 6 ? O N N 6 ? P N N 6 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 PRO A 90 ? GLU A 102 ? PRO A 196 GLU A 208 1 ? 13 HELX_P HELX_P2 2 GLN A 112 ? ARG A 117 ? GLN A 218 ARG A 223 1 ? 6 HELX_P HELX_P3 3 PRO A 121 ? GLY A 137 ? PRO A 227 GLY A 243 1 ? 17 HELX_P HELX_P4 4 SER A 156 ? ALA A 166 ? SER A 262 ALA A 272 1 ? 11 HELX_P HELX_P5 5 CYS A 201 ? GLY A 211 ? CYS A 307 GLY A 317 1 ? 11 HELX_P HELX_P6 6 THR A 216 ? LEU A 222 ? THR A 322 LEU A 328 1 ? 7 HELX_P HELX_P7 7 ASP A 235 ? ILE A 239 ? ASP A 341 ILE A 345 5 ? 5 HELX_P HELX_P8 8 GLY A 270 ? LEU A 279 ? GLY A 376 LEU A 385 1 ? 10 HELX_P HELX_P9 9 VAL A 280 ? GLY A 283 ? VAL A 386 GLY A 389 5 ? 4 HELX_P HELX_P10 10 ASN A 288 ? GLY A 293 ? ASN A 394 GLY A 399 1 ? 6 HELX_P HELX_P11 11 SER A 294 ? GLN A 308 ? SER A 400 GLN A 414 1 ? 15 HELX_P HELX_P12 12 ASP A 320 ? GLY A 335 ? ASP A 426 GLY A 441 1 ? 16 HELX_P HELX_P13 13 THR A 346 ? ASP A 361 ? THR A 452 ASP A 467 1 ? 16 HELX_P HELX_P14 14 SER A 368 ? PHE A 379 ? SER A 474 PHE A 485 1 ? 12 HELX_P HELX_P15 15 THR A 383 ? GLY A 387 ? THR A 489 GLY A 493 5 ? 5 HELX_P HELX_P16 16 ASP A 403 ? GLN A 412 ? ASP A 509 GLN A 518 1 ? 10 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A PHE 343 C ? ? ? 1_555 A CSX 344 N ? ? A PHE 449 A CSX 450 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale2 covale both ? A CSX 344 C ? ? ? 1_555 A ALA 345 N ? ? A CSX 450 A ALA 451 1_555 ? ? ? ? ? ? ? 1.329 ? ? metalc1 metalc ? ? A SER 272 OG ? ? ? 1_555 G MN . MN ? ? A SER 378 A MN 901 1_555 ? ? ? ? ? ? ? 2.217 ? ? metalc2 metalc ? ? G MN . MN ? ? ? 1_555 I ADP . O1B ? ? A MN 901 A ADP 1524 1_555 ? ? ? ? ? ? ? 2.148 ? ? metalc3 metalc ? ? G MN . MN ? ? ? 1_555 K HOH . O ? ? A MN 901 A HOH 2104 1_555 ? ? ? ? ? ? ? 2.331 ? ? metalc4 metalc ? ? G MN . MN ? ? ? 1_555 K HOH . O ? ? A MN 901 A HOH 2105 1_555 ? ? ? ? ? ? ? 2.459 ? ? metalc5 metalc ? ? G MN . MN ? ? ? 1_555 K HOH . O ? ? A MN 901 A HOH 2106 1_555 ? ? ? ? ? ? ? 2.381 ? ? metalc6 metalc ? ? G MN . MN ? ? ? 1_555 K HOH . O ? ? A MN 901 A HOH 2208 1_555 ? ? ? ? ? ? ? 2.307 ? ? hydrog1 hydrog ? ? B DG 1 N1 ? ? ? 1_555 F DC 3 N3 ? ? E DG 1 I DC 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? B DG 1 N2 ? ? ? 1_555 F DC 3 O2 ? ? E DG 1 I DC 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? B DG 1 O6 ? ? ? 1_555 F DC 3 N4 ? ? E DG 1 I DC 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? B DT 2 O2 ? ? ? 1_555 B DA 4 N6 ? ? E DT 2 E DA 4 1_555 ? ? ? ? ? ? 'DT-DA PAIR' ? ? ? hydrog5 hydrog ? ? B DT 2 N3 ? ? ? 1_555 F DT 2 O4 ? ? E DT 2 I DT 2 1_555 ? ? ? ? ? ? TYPE_16_PAIR ? ? ? hydrog6 hydrog ? ? B DT 2 O2 ? ? ? 1_555 F DT 2 N3 ? ? E DT 2 I DT 2 1_555 ? ? ? ? ? ? TYPE_16_PAIR ? ? ? hydrog7 hydrog ? ? B DC 3 N3 ? ? ? 1_555 F DG 1 N1 ? ? E DC 3 I DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? B DC 3 N4 ? ? ? 1_555 F DG 1 O6 ? ? E DC 3 I DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? B DC 3 O2 ? ? ? 1_555 F DG 1 N2 ? ? E DC 3 I DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? B DA 4 N6 ? ? ? 1_555 F DT 2 O2 ? ? E DA 4 I DT 2 1_555 ? ? ? ? ? ? 'DA-DT PAIR' ? ? ? hydrog11 hydrog ? ? C DG 1 N1 ? ? ? 1_555 E DC 5 N3 ? ? F DG 1 H DC 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? C DG 1 N2 ? ? ? 1_555 E DC 5 O2 ? ? F DG 1 H DC 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? C DG 1 O6 ? ? ? 1_555 E DC 5 N4 ? ? F DG 1 H DC 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? C DT 2 N3 ? ? ? 1_555 E DA 4 N1 ? ? F DT 2 H DA 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? C DT 2 O4 ? ? ? 1_555 E DA 4 N6 ? ? F DT 2 H DA 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? C DC 3 N3 ? ? ? 1_555 E DC 3 N4 ? ? F DC 3 H DC 3 1_555 ? ? ? ? ? ? 'DC-DC MISPAIR' ? ? ? hydrog17 hydrog ? ? C DA 4 N1 ? ? ? 1_555 E DT 2 N3 ? ? F DA 4 H DT 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? C DA 4 N6 ? ? ? 1_555 E DT 2 O4 ? ? F DA 4 H DT 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? C DC 5 N3 ? ? ? 1_555 E DG 1 N1 ? ? F DC 5 H DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? C DC 5 N4 ? ? ? 1_555 E DG 1 O6 ? ? F DC 5 H DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? C DC 5 O2 ? ? ? 1_555 E DG 1 N2 ? ? F DC 5 H DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? D DG 1 N1 ? ? ? 1_555 F DC 5 N3 ? ? G DG 1 I DC 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? D DG 1 N2 ? ? ? 1_555 F DC 5 O2 ? ? G DG 1 I DC 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? D DG 1 O6 ? ? ? 1_555 F DC 5 N4 ? ? G DG 1 I DC 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? D DT 2 N3 ? ? ? 1_555 F DA 4 N1 ? ? G DT 2 I DA 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? D DT 2 O4 ? ? ? 1_555 F DA 4 N6 ? ? G DT 2 I DA 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? hydrog ? ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 LYS 153 A . ? LYS 259 A PRO 154 A ? PRO 260 A 1 8.60 2 LEU 247 A . ? LEU 353 A PRO 248 A ? PRO 354 A 1 -3.34 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA ? 7 ? AB ? 2 ? AC ? 5 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA 1 2 ? anti-parallel AA 2 3 ? anti-parallel AA 3 4 ? parallel AA 4 5 ? parallel AA 5 6 ? parallel AA 6 7 ? parallel AB 1 2 ? anti-parallel AC 1 2 ? parallel AC 2 3 ? parallel AC 3 4 ? parallel AC 4 5 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA 1 SER A 42 ? LEU A 43 ? SER A 148 LEU A 149 AA 2 LEU A 46 ? THR A 50 ? LEU A 152 THR A 156 AA 3 GLN A 141 ? ALA A 145 ? GLN A 247 ALA A 251 AA 4 LYS A 105 ? ASN A 111 ? LYS A 211 ASN A 217 AA 5 VAL A 60 ? PHE A 63 ? VAL A 166 PHE A 169 AA 6 VAL A 178 ? VAL A 180 ? VAL A 284 VAL A 286 AA 7 PHE A 214 ? ALA A 215 ? PHE A 320 ALA A 321 AB 1 ILE A 70 ? THR A 71 ? ILE A 176 THR A 177 AB 2 ARG A 86 ? ILE A 87 ? ARG A 192 ILE A 193 AC 1 VAL A 285 ? VAL A 287 ? VAL A 391 VAL A 393 AC 2 VAL A 312 ? ILE A 314 ? VAL A 418 ILE A 420 AC 3 VAL A 260 ? VAL A 264 ? VAL A 366 VAL A 370 AC 4 CYS A 338 ? PHE A 343 ? CYS A 444 PHE A 449 AC 5 GLU A 390 ? ILE A 394 ? GLU A 496 ILE A 500 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA 1 2 N LEU A 43 ? N LEU A 149 O LEU A 46 ? O LEU A 152 AA 2 3 N PHE A 49 ? N PHE A 155 O VAL A 142 ? O VAL A 248 AA 3 4 N GLN A 141 ? N GLN A 247 O LEU A 106 ? O LEU A 212 AA 4 5 N VAL A 107 ? N VAL A 213 O ALA A 61 ? O ALA A 167 AA 5 6 N ALA A 62 ? N ALA A 168 O VAL A 178 ? O VAL A 284 AA 6 7 O PHE A 179 ? O PHE A 285 N ALA A 215 ? N ALA A 321 AB 1 2 N THR A 71 ? N THR A 177 O ARG A 86 ? O ARG A 192 AC 1 2 N VAL A 287 ? N VAL A 393 O VAL A 313 ? O VAL A 419 AC 2 3 N ILE A 314 ? N ILE A 420 O VAL A 261 ? O VAL A 367 AC 3 4 N VAL A 262 ? N VAL A 368 O ARG A 339 ? O ARG A 445 AC 4 5 N CYS A 340 ? N CYS A 446 O GLU A 390 ? O GLU A 496 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A MN 901 ? 6 'BINDING SITE FOR RESIDUE MN A 901' AC2 Software A GOL 1523 ? 10 'BINDING SITE FOR RESIDUE GOL A 1523' AC3 Software A ADP 1524 ? 20 'BINDING SITE FOR RESIDUE ADP A 1524' AC4 Software A GOL 1525 ? 1 'BINDING SITE FOR RESIDUE GOL A 1525' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 6 SER A 272 ? SER A 378 . ? 1_555 ? 2 AC1 6 ADP I . ? ADP A 1524 . ? 1_555 ? 3 AC1 6 HOH K . ? HOH A 2104 . ? 1_555 ? 4 AC1 6 HOH K . ? HOH A 2105 . ? 1_555 ? 5 AC1 6 HOH K . ? HOH A 2106 . ? 1_555 ? 6 AC1 6 HOH K . ? HOH A 2208 . ? 1_555 ? 7 AC2 10 ALA A 269 ? ALA A 375 . ? 1_555 ? 8 AC2 10 GLY A 270 ? GLY A 376 . ? 1_555 ? 9 AC2 10 PHE A 274 ? PHE A 380 . ? 1_555 ? 10 AC2 10 PHE A 343 ? PHE A 449 . ? 1_555 ? 11 AC2 10 PRO A 395 ? PRO A 501 . ? 1_555 ? 12 AC2 10 PHE A 396 ? PHE A 502 . ? 1_555 ? 13 AC2 10 ARG A 397 ? ARG A 503 . ? 1_555 ? 14 AC2 10 ADP I . ? ADP A 1524 . ? 1_555 ? 15 AC2 10 HOH K . ? HOH A 2101 . ? 1_555 ? 16 AC2 10 HOH K . ? HOH A 2209 . ? 1_555 ? 17 AC3 20 PHE A 266 ? PHE A 372 . ? 1_555 ? 18 AC3 20 GLY A 268 ? GLY A 374 . ? 1_555 ? 19 AC3 20 ALA A 269 ? ALA A 375 . ? 1_555 ? 20 AC3 20 GLY A 270 ? GLY A 376 . ? 1_555 ? 21 AC3 20 LYS A 271 ? LYS A 377 . ? 1_555 ? 22 AC3 20 SER A 272 ? SER A 378 . ? 1_555 ? 23 AC3 20 THR A 273 ? THR A 379 . ? 1_555 ? 24 AC3 20 ASN A 353 ? ASN A 459 . ? 1_555 ? 25 AC3 20 PHE A 356 ? PHE A 462 . ? 1_555 ? 26 AC3 20 ARG A 357 ? ARG A 463 . ? 1_555 ? 27 AC3 20 PHE A 396 ? PHE A 502 . ? 1_555 ? 28 AC3 20 ARG A 397 ? ARG A 503 . ? 1_555 ? 29 AC3 20 LEU A 398 ? LEU A 504 . ? 1_555 ? 30 AC3 20 GLN A 399 ? GLN A 505 . ? 1_555 ? 31 AC3 20 MN G . ? MN A 901 . ? 1_555 ? 32 AC3 20 GOL H . ? GOL A 1523 . ? 1_555 ? 33 AC3 20 HOH K . ? HOH A 2105 . ? 1_555 ? 34 AC3 20 HOH K . ? HOH A 2178 . ? 1_555 ? 35 AC3 20 HOH K . ? HOH A 2208 . ? 1_555 ? 36 AC3 20 HOH K . ? HOH A 2210 . ? 1_555 ? 37 AC4 1 HOH K . ? HOH A 2064 . ? 1_555 ? # _database_PDB_matrix.entry_id 3ZVN _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3ZVN _atom_sites.fract_transf_matrix[1][1] 0.014436 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.013701 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.008738 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C MN N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 107 ? ? ? A . n A 1 2 PRO 2 108 ? ? ? A . n A 1 3 HIS 3 109 ? ? ? A . n A 1 4 MET 4 110 ? ? ? A . n A 1 5 THR 5 111 ? ? ? A . n A 1 6 SER 6 112 ? ? ? A . n A 1 7 GLY 7 113 ? ? ? A . n A 1 8 SER 8 114 ? ? ? A . n A 1 9 GLN 9 115 ? ? ? A . n A 1 10 PRO 10 116 ? ? ? A . n A 1 11 ASP 11 117 ? ? ? A . n A 1 12 ALA 12 118 ? ? ? A . n A 1 13 PRO 13 119 ? ? ? A . n A 1 14 PRO 14 120 ? ? ? A . n A 1 15 ASP 15 121 ? ? ? A . n A 1 16 THR 16 122 ? ? ? A . n A 1 17 PRO 17 123 ? ? ? A . n A 1 18 GLY 18 124 ? ? ? A . n A 1 19 ASP 19 125 ? ? ? A . n A 1 20 PRO 20 126 ? ? ? A . n A 1 21 GLU 21 127 ? ? ? A . n A 1 22 GLU 22 128 ? ? ? A . n A 1 23 GLY 23 129 ? ? ? A . n A 1 24 GLU 24 130 ? ? ? A . n A 1 25 ASP 25 131 ? ? ? A . n A 1 26 THR 26 132 ? ? ? A . n A 1 27 GLU 27 133 ? ? ? A . n A 1 28 PRO 28 134 ? ? ? A . n A 1 29 GLN 29 135 ? ? ? A . n A 1 30 LYS 30 136 ? ? ? A . n A 1 31 LYS 31 137 ? ? ? A . n A 1 32 ARG 32 138 ? ? ? A . n A 1 33 VAL 33 139 ? ? ? A . n A 1 34 ARG 34 140 ? ? ? A . n A 1 35 LYS 35 141 ? ? ? A . n A 1 36 SER 36 142 ? ? ? A . n A 1 37 SER 37 143 ? ? ? A . n A 1 38 LEU 38 144 ? ? ? A . n A 1 39 GLY 39 145 ? ? ? A . n A 1 40 TRP 40 146 146 TRP TRP A . n A 1 41 GLU 41 147 147 GLU GLU A . n A 1 42 SER 42 148 148 SER SER A . n A 1 43 LEU 43 149 149 LEU LEU A . n A 1 44 LYS 44 150 150 LYS LYS A . n A 1 45 LYS 45 151 151 LYS LYS A . n A 1 46 LEU 46 152 152 LEU LEU A . n A 1 47 LEU 47 153 153 LEU LEU A . n A 1 48 VAL 48 154 154 VAL VAL A . n A 1 49 PHE 49 155 155 PHE PHE A . n A 1 50 THR 50 156 156 THR THR A . n A 1 51 ALA 51 157 157 ALA ALA A . n A 1 52 SER 52 158 158 SER SER A . n A 1 53 GLY 53 159 159 GLY GLY A . n A 1 54 VAL 54 160 160 VAL VAL A . n A 1 55 LYS 55 161 161 LYS LYS A . n A 1 56 PRO 56 162 162 PRO PRO A . n A 1 57 GLN 57 163 163 GLN GLN A . n A 1 58 GLY 58 164 164 GLY GLY A . n A 1 59 LYS 59 165 165 LYS LYS A . n A 1 60 VAL 60 166 166 VAL VAL A . n A 1 61 ALA 61 167 167 ALA ALA A . n A 1 62 ALA 62 168 168 ALA ALA A . n A 1 63 PHE 63 169 169 PHE PHE A . n A 1 64 ASN 64 170 170 ASN ASN A . n A 1 65 LEU 65 171 171 LEU LEU A . n A 1 66 ASP 66 172 172 ASP ASP A . n A 1 67 GLY 67 173 173 GLY GLY A . n A 1 68 THR 68 174 174 THR THR A . n A 1 69 LEU 69 175 175 LEU LEU A . n A 1 70 ILE 70 176 176 ILE ILE A . n A 1 71 THR 71 177 177 THR THR A . n A 1 72 THR 72 178 178 THR THR A . n A 1 73 ARG 73 179 179 ARG ARG A . n A 1 74 SER 74 180 180 SER SER A . n A 1 75 GLY 75 181 181 GLY GLY A . n A 1 76 LYS 76 182 182 LYS LYS A . n A 1 77 VAL 77 183 183 VAL VAL A . n A 1 78 PHE 78 184 184 PHE PHE A . n A 1 79 PRO 79 185 185 PRO PRO A . n A 1 80 THR 80 186 186 THR THR A . n A 1 81 SER 81 187 187 SER SER A . n A 1 82 PRO 82 188 188 PRO PRO A . n A 1 83 SER 83 189 189 SER SER A . n A 1 84 ASP 84 190 190 ASP ASP A . n A 1 85 TRP 85 191 191 TRP TRP A . n A 1 86 ARG 86 192 192 ARG ARG A . n A 1 87 ILE 87 193 193 ILE ILE A . n A 1 88 LEU 88 194 194 LEU LEU A . n A 1 89 TYR 89 195 195 TYR TYR A . n A 1 90 PRO 90 196 196 PRO PRO A . n A 1 91 GLU 91 197 197 GLU GLU A . n A 1 92 ILE 92 198 198 ILE ILE A . n A 1 93 PRO 93 199 199 PRO PRO A . n A 1 94 LYS 94 200 200 LYS LYS A . n A 1 95 LYS 95 201 201 LYS LYS A . n A 1 96 LEU 96 202 202 LEU LEU A . n A 1 97 GLN 97 203 203 GLN GLN A . n A 1 98 GLU 98 204 204 GLU GLU A . n A 1 99 LEU 99 205 205 LEU LEU A . n A 1 100 ALA 100 206 206 ALA ALA A . n A 1 101 ALA 101 207 207 ALA ALA A . n A 1 102 GLU 102 208 208 GLU GLU A . n A 1 103 GLY 103 209 209 GLY GLY A . n A 1 104 TYR 104 210 210 TYR TYR A . n A 1 105 LYS 105 211 211 LYS LYS A . n A 1 106 LEU 106 212 212 LEU LEU A . n A 1 107 VAL 107 213 213 VAL VAL A . n A 1 108 ILE 108 214 214 ILE ILE A . n A 1 109 PHE 109 215 215 PHE PHE A . n A 1 110 THR 110 216 216 THR THR A . n A 1 111 ASN 111 217 217 ASN ASN A . n A 1 112 GLN 112 218 218 GLN GLN A . n A 1 113 MET 113 219 219 MET MET A . n A 1 114 GLY 114 220 220 GLY GLY A . n A 1 115 ILE 115 221 221 ILE ILE A . n A 1 116 GLY 116 222 222 GLY GLY A . n A 1 117 ARG 117 223 223 ARG ARG A . n A 1 118 GLY 118 224 224 GLY GLY A . n A 1 119 LYS 119 225 225 LYS LYS A . n A 1 120 LEU 120 226 226 LEU LEU A . n A 1 121 PRO 121 227 227 PRO PRO A . n A 1 122 ALA 122 228 228 ALA ALA A . n A 1 123 GLU 123 229 229 GLU GLU A . n A 1 124 VAL 124 230 230 VAL VAL A . n A 1 125 PHE 125 231 231 PHE PHE A . n A 1 126 LYS 126 232 232 LYS LYS A . n A 1 127 GLY 127 233 233 GLY GLY A . n A 1 128 LYS 128 234 234 LYS LYS A . n A 1 129 VAL 129 235 235 VAL VAL A . n A 1 130 GLU 130 236 236 GLU GLU A . n A 1 131 ALA 131 237 237 ALA ALA A . n A 1 132 VAL 132 238 238 VAL VAL A . n A 1 133 LEU 133 239 239 LEU LEU A . n A 1 134 GLU 134 240 240 GLU GLU A . n A 1 135 LYS 135 241 241 LYS LYS A . n A 1 136 LEU 136 242 242 LEU LEU A . n A 1 137 GLY 137 243 243 GLY GLY A . n A 1 138 VAL 138 244 244 VAL VAL A . n A 1 139 PRO 139 245 245 PRO PRO A . n A 1 140 PHE 140 246 246 PHE PHE A . n A 1 141 GLN 141 247 247 GLN GLN A . n A 1 142 VAL 142 248 248 VAL VAL A . n A 1 143 LEU 143 249 249 LEU LEU A . n A 1 144 VAL 144 250 250 VAL VAL A . n A 1 145 ALA 145 251 251 ALA ALA A . n A 1 146 THR 146 252 252 THR THR A . n A 1 147 HIS 147 253 253 HIS HIS A . n A 1 148 ALA 148 254 254 ALA ALA A . n A 1 149 GLY 149 255 255 GLY GLY A . n A 1 150 LEU 150 256 256 LEU LEU A . n A 1 151 ASN 151 257 257 ASN ASN A . n A 1 152 ARG 152 258 258 ARG ARG A . n A 1 153 LYS 153 259 259 LYS LYS A . n A 1 154 PRO 154 260 260 PRO PRO A . n A 1 155 VAL 155 261 261 VAL VAL A . n A 1 156 SER 156 262 262 SER SER A . n A 1 157 GLY 157 263 263 GLY GLY A . n A 1 158 MET 158 264 264 MET MET A . n A 1 159 TRP 159 265 265 TRP TRP A . n A 1 160 ASP 160 266 266 ASP ASP A . n A 1 161 HIS 161 267 267 HIS HIS A . n A 1 162 LEU 162 268 268 LEU LEU A . n A 1 163 GLN 163 269 269 GLN GLN A . n A 1 164 GLU 164 270 270 GLU GLU A . n A 1 165 GLN 165 271 271 GLN GLN A . n A 1 166 ALA 166 272 272 ALA ALA A . n A 1 167 ASN 167 273 273 ASN ASN A . n A 1 168 GLU 168 274 274 GLU GLU A . n A 1 169 GLY 169 275 275 GLY GLY A . n A 1 170 ILE 170 276 276 ILE ILE A . n A 1 171 PRO 171 277 277 PRO PRO A . n A 1 172 ILE 172 278 278 ILE ILE A . n A 1 173 SER 173 279 279 SER SER A . n A 1 174 VAL 174 280 280 VAL VAL A . n A 1 175 GLU 175 281 281 GLU GLU A . n A 1 176 ASP 176 282 282 ASP ASP A . n A 1 177 SER 177 283 283 SER SER A . n A 1 178 VAL 178 284 284 VAL VAL A . n A 1 179 PHE 179 285 285 PHE PHE A . n A 1 180 VAL 180 286 286 VAL VAL A . n A 1 181 GLY 181 287 287 GLY GLY A . n A 1 182 ASP 182 288 288 ASP ASP A . n A 1 183 ALA 183 289 289 ALA ALA A . n A 1 184 ALA 184 290 290 ALA ALA A . n A 1 185 GLY 185 291 291 GLY GLY A . n A 1 186 ARG 186 292 292 ARG ARG A . n A 1 187 LEU 187 293 293 LEU LEU A . n A 1 188 ALA 188 294 294 ALA ALA A . n A 1 189 ASN 189 295 295 ASN ASN A . n A 1 190 TRP 190 296 296 TRP TRP A . n A 1 191 ALA 191 297 297 ALA ALA A . n A 1 192 PRO 192 298 298 PRO PRO A . n A 1 193 GLY 193 299 299 GLY GLY A . n A 1 194 ARG 194 300 300 ARG ARG A . n A 1 195 LYS 195 301 301 LYS LYS A . n A 1 196 LYS 196 302 302 LYS LYS A . n A 1 197 LYS 197 303 303 LYS LYS A . n A 1 198 ASP 198 304 304 ASP ASP A . n A 1 199 PHE 199 305 305 PHE PHE A . n A 1 200 SER 200 306 306 SER SER A . n A 1 201 CYS 201 307 307 CYS CYS A . n A 1 202 ALA 202 308 308 ALA ALA A . n A 1 203 ASP 203 309 309 ASP ASP A . n A 1 204 ARG 204 310 310 ARG ARG A . n A 1 205 LEU 205 311 311 LEU LEU A . n A 1 206 PHE 206 312 312 PHE PHE A . n A 1 207 ALA 207 313 313 ALA ALA A . n A 1 208 LEU 208 314 314 LEU LEU A . n A 1 209 ASN 209 315 315 ASN ASN A . n A 1 210 VAL 210 316 316 VAL VAL A . n A 1 211 GLY 211 317 317 GLY GLY A . n A 1 212 LEU 212 318 318 LEU LEU A . n A 1 213 PRO 213 319 319 PRO PRO A . n A 1 214 PHE 214 320 320 PHE PHE A . n A 1 215 ALA 215 321 321 ALA ALA A . n A 1 216 THR 216 322 322 THR THR A . n A 1 217 PRO 217 323 323 PRO PRO A . n A 1 218 GLU 218 324 324 GLU GLU A . n A 1 219 GLU 219 325 325 GLU GLU A . n A 1 220 PHE 220 326 326 PHE PHE A . n A 1 221 PHE 221 327 327 PHE PHE A . n A 1 222 LEU 222 328 328 LEU LEU A . n A 1 223 LYS 223 329 329 LYS LYS A . n A 1 224 TRP 224 330 330 TRP TRP A . n A 1 225 PRO 225 331 331 PRO PRO A . n A 1 226 ALA 226 332 332 ALA ALA A . n A 1 227 ALA 227 333 333 ALA ALA A . n A 1 228 ARG 228 334 334 ARG ARG A . n A 1 229 PHE 229 335 335 PHE PHE A . n A 1 230 GLU 230 336 336 GLU GLU A . n A 1 231 LEU 231 337 337 LEU LEU A . n A 1 232 PRO 232 338 338 PRO PRO A . n A 1 233 ALA 233 339 339 ALA ALA A . n A 1 234 PHE 234 340 340 PHE PHE A . n A 1 235 ASP 235 341 341 ASP ASP A . n A 1 236 PRO 236 342 342 PRO PRO A . n A 1 237 ARG 237 343 343 ARG ARG A . n A 1 238 THR 238 344 344 THR THR A . n A 1 239 ILE 239 345 345 ILE ILE A . n A 1 240 SER 240 346 346 SER SER A . n A 1 241 SER 241 347 347 SER SER A . n A 1 242 ALA 242 348 348 ALA ALA A . n A 1 243 GLY 243 349 349 GLY GLY A . n A 1 244 PRO 244 350 350 PRO PRO A . n A 1 245 LEU 245 351 351 LEU LEU A . n A 1 246 TYR 246 352 352 TYR TYR A . n A 1 247 LEU 247 353 353 LEU LEU A . n A 1 248 PRO 248 354 354 PRO PRO A . n A 1 249 GLU 249 355 355 GLU GLU A . n A 1 250 SER 250 356 356 SER SER A . n A 1 251 SER 251 357 357 SER SER A . n A 1 252 SER 252 358 358 SER SER A . n A 1 253 LEU 253 359 359 LEU LEU A . n A 1 254 LEU 254 360 360 LEU LEU A . n A 1 255 SER 255 361 361 SER SER A . n A 1 256 PRO 256 362 362 PRO PRO A . n A 1 257 ASN 257 363 363 ASN ASN A . n A 1 258 PRO 258 364 364 PRO PRO A . n A 1 259 GLU 259 365 365 GLU GLU A . n A 1 260 VAL 260 366 366 VAL VAL A . n A 1 261 VAL 261 367 367 VAL VAL A . n A 1 262 VAL 262 368 368 VAL VAL A . n A 1 263 ALA 263 369 369 ALA ALA A . n A 1 264 VAL 264 370 370 VAL VAL A . n A 1 265 GLY 265 371 371 GLY GLY A . n A 1 266 PHE 266 372 372 PHE PHE A . n A 1 267 PRO 267 373 373 PRO PRO A . n A 1 268 GLY 268 374 374 GLY GLY A . n A 1 269 ALA 269 375 375 ALA ALA A . n A 1 270 GLY 270 376 376 GLY GLY A . n A 1 271 LYS 271 377 377 LYS LYS A . n A 1 272 SER 272 378 378 SER SER A . n A 1 273 THR 273 379 379 THR THR A . n A 1 274 PHE 274 380 380 PHE PHE A . n A 1 275 ILE 275 381 381 ILE ILE A . n A 1 276 GLN 276 382 382 GLN GLN A . n A 1 277 GLU 277 383 383 GLU GLU A . n A 1 278 HIS 278 384 384 HIS HIS A . n A 1 279 LEU 279 385 385 LEU LEU A . n A 1 280 VAL 280 386 386 VAL VAL A . n A 1 281 SER 281 387 387 SER SER A . n A 1 282 ALA 282 388 388 ALA ALA A . n A 1 283 GLY 283 389 389 GLY GLY A . n A 1 284 TYR 284 390 390 TYR TYR A . n A 1 285 VAL 285 391 391 VAL VAL A . n A 1 286 HIS 286 392 392 HIS HIS A . n A 1 287 VAL 287 393 393 VAL VAL A . n A 1 288 ASN 288 394 394 ASN ASN A . n A 1 289 ARG 289 395 395 ARG ARG A . n A 1 290 ASP 290 396 396 ASP ASP A . n A 1 291 THR 291 397 397 THR THR A . n A 1 292 LEU 292 398 398 LEU LEU A . n A 1 293 GLY 293 399 399 GLY GLY A . n A 1 294 SER 294 400 400 SER SER A . n A 1 295 TRP 295 401 401 TRP TRP A . n A 1 296 GLN 296 402 402 GLN GLN A . n A 1 297 ARG 297 403 403 ARG ARG A . n A 1 298 CYS 298 404 404 CYS CYS A . n A 1 299 VAL 299 405 405 VAL VAL A . n A 1 300 SER 300 406 406 SER SER A . n A 1 301 SER 301 407 407 SER SER A . n A 1 302 CYS 302 408 408 CYS CYS A . n A 1 303 GLN 303 409 409 GLN GLN A . n A 1 304 ALA 304 410 410 ALA ALA A . n A 1 305 ALA 305 411 411 ALA ALA A . n A 1 306 LEU 306 412 412 LEU LEU A . n A 1 307 ARG 307 413 413 ARG ARG A . n A 1 308 GLN 308 414 414 GLN GLN A . n A 1 309 GLY 309 415 415 GLY GLY A . n A 1 310 LYS 310 416 416 LYS LYS A . n A 1 311 ARG 311 417 417 ARG ARG A . n A 1 312 VAL 312 418 418 VAL VAL A . n A 1 313 VAL 313 419 419 VAL VAL A . n A 1 314 ILE 314 420 420 ILE ILE A . n A 1 315 ASP 315 421 421 ASP ASP A . n A 1 316 ASN 316 422 422 ASN ASN A . n A 1 317 THR 317 423 423 THR THR A . n A 1 318 ASN 318 424 424 ASN ASN A . n A 1 319 PRO 319 425 425 PRO PRO A . n A 1 320 ASP 320 426 426 ASP ASP A . n A 1 321 VAL 321 427 427 VAL VAL A . n A 1 322 PRO 322 428 428 PRO PRO A . n A 1 323 SER 323 429 429 SER SER A . n A 1 324 ARG 324 430 430 ARG ARG A . n A 1 325 ALA 325 431 431 ALA ALA A . n A 1 326 ARG 326 432 432 ARG ARG A . n A 1 327 TYR 327 433 433 TYR TYR A . n A 1 328 ILE 328 434 434 ILE ILE A . n A 1 329 GLN 329 435 435 GLN GLN A . n A 1 330 CYS 330 436 436 CYS CYS A . n A 1 331 ALA 331 437 437 ALA ALA A . n A 1 332 LYS 332 438 438 LYS LYS A . n A 1 333 ASP 333 439 439 ASP ASP A . n A 1 334 ALA 334 440 440 ALA ALA A . n A 1 335 GLY 335 441 441 GLY GLY A . n A 1 336 VAL 336 442 442 VAL VAL A . n A 1 337 PRO 337 443 443 PRO PRO A . n A 1 338 CYS 338 444 444 CYS CYS A . n A 1 339 ARG 339 445 445 ARG ARG A . n A 1 340 CYS 340 446 446 CYS CYS A . n A 1 341 PHE 341 447 447 PHE PHE A . n A 1 342 ASN 342 448 448 ASN ASN A . n A 1 343 PHE 343 449 449 PHE PHE A . n A 1 344 CSX 344 450 450 CSX CSX A . n A 1 345 ALA 345 451 451 ALA ALA A . n A 1 346 THR 346 452 452 THR THR A . n A 1 347 ILE 347 453 453 ILE ILE A . n A 1 348 GLU 348 454 454 GLU GLU A . n A 1 349 GLN 349 455 455 GLN GLN A . n A 1 350 ALA 350 456 456 ALA ALA A . n A 1 351 ARG 351 457 457 ARG ARG A . n A 1 352 HIS 352 458 458 HIS HIS A . n A 1 353 ASN 353 459 459 ASN ASN A . n A 1 354 ASN 354 460 460 ASN ASN A . n A 1 355 ARG 355 461 461 ARG ARG A . n A 1 356 PHE 356 462 462 PHE PHE A . n A 1 357 ARG 357 463 463 ARG ARG A . n A 1 358 GLU 358 464 464 GLU GLU A . n A 1 359 MET 359 465 465 MET MET A . n A 1 360 THR 360 466 466 THR THR A . n A 1 361 ASP 361 467 467 ASP ASP A . n A 1 362 PRO 362 468 468 PRO PRO A . n A 1 363 SER 363 469 469 SER SER A . n A 1 364 HIS 364 470 470 HIS HIS A . n A 1 365 ALA 365 471 471 ALA ALA A . n A 1 366 PRO 366 472 472 PRO PRO A . n A 1 367 VAL 367 473 473 VAL VAL A . n A 1 368 SER 368 474 474 SER SER A . n A 1 369 ASP 369 475 475 ASP ASP A . n A 1 370 MET 370 476 476 MET MET A . n A 1 371 VAL 371 477 477 VAL VAL A . n A 1 372 MET 372 478 478 MET MET A . n A 1 373 PHE 373 479 479 PHE PHE A . n A 1 374 SER 374 480 480 SER SER A . n A 1 375 TYR 375 481 481 TYR TYR A . n A 1 376 ARG 376 482 482 ARG ARG A . n A 1 377 LYS 377 483 483 LYS LYS A . n A 1 378 GLN 378 484 484 GLN GLN A . n A 1 379 PHE 379 485 485 PHE PHE A . n A 1 380 GLU 380 486 486 GLU GLU A . n A 1 381 PRO 381 487 487 PRO PRO A . n A 1 382 PRO 382 488 488 PRO PRO A . n A 1 383 THR 383 489 489 THR THR A . n A 1 384 LEU 384 490 490 LEU LEU A . n A 1 385 ALA 385 491 491 ALA ALA A . n A 1 386 GLU 386 492 492 GLU GLU A . n A 1 387 GLY 387 493 493 GLY GLY A . n A 1 388 PHE 388 494 494 PHE PHE A . n A 1 389 LEU 389 495 495 LEU LEU A . n A 1 390 GLU 390 496 496 GLU GLU A . n A 1 391 ILE 391 497 497 ILE ILE A . n A 1 392 LEU 392 498 498 LEU LEU A . n A 1 393 GLU 393 499 499 GLU GLU A . n A 1 394 ILE 394 500 500 ILE ILE A . n A 1 395 PRO 395 501 501 PRO PRO A . n A 1 396 PHE 396 502 502 PHE PHE A . n A 1 397 ARG 397 503 503 ARG ARG A . n A 1 398 LEU 398 504 504 LEU LEU A . n A 1 399 GLN 399 505 505 GLN GLN A . n A 1 400 GLU 400 506 506 GLU GLU A . n A 1 401 HIS 401 507 507 HIS HIS A . n A 1 402 LEU 402 508 508 LEU LEU A . n A 1 403 ASP 403 509 509 ASP ASP A . n A 1 404 PRO 404 510 510 PRO PRO A . n A 1 405 ALA 405 511 511 ALA ALA A . n A 1 406 LEU 406 512 512 LEU LEU A . n A 1 407 GLN 407 513 513 GLN GLN A . n A 1 408 ARG 408 514 514 ARG ARG A . n A 1 409 LEU 409 515 515 LEU LEU A . n A 1 410 TYR 410 516 516 TYR TYR A . n A 1 411 ARG 411 517 517 ARG ARG A . n A 1 412 GLN 412 518 518 GLN GLN A . n A 1 413 PHE 413 519 519 PHE PHE A . n A 1 414 SER 414 520 520 SER SER A . n A 1 415 GLU 415 521 521 GLU GLU A . n A 1 416 GLY 416 522 522 GLY GLY A . n B 2 1 DG 1 1 1 DG DG E . n B 2 2 DT 2 2 2 DT DT E . n B 2 3 DC 3 3 3 DC DC E . n B 2 4 DA 4 4 4 DA DA E . n B 2 5 DC 5 5 ? ? ? E . n C 2 1 DG 1 1 1 DG DG F . n C 2 2 DT 2 2 2 DT DT F . n C 2 3 DC 3 3 3 DC DC F . n C 2 4 DA 4 4 4 DA DA F . n C 2 5 DC 5 5 5 DC DC F . n D 2 1 DG 1 1 1 DG DG G . n D 2 2 DT 2 2 2 DT DT G . n D 2 3 DC 3 3 3 DC DC G . n D 2 4 DA 4 4 4 DA DA G . n D 2 5 DC 5 5 5 DC DC G . n E 2 1 DG 1 1 1 DG DG H . n E 2 2 DT 2 2 2 DT DT H . n E 2 3 DC 3 3 3 DC DC H . n E 2 4 DA 4 4 4 DA DA H . n E 2 5 DC 5 5 5 DC DC H . n F 2 1 DG 1 1 1 DG DG I . n F 2 2 DT 2 2 2 DT DT I . n F 2 3 DC 3 3 3 DC DC I . n F 2 4 DA 4 4 4 DA DA I . n F 2 5 DC 5 5 5 DC DC I . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code G 3 MN 1 901 901 MN MN A . H 4 GOL 1 1523 1523 GOL GOL A . I 5 ADP 1 1524 1524 ADP ADP A . J 4 GOL 1 1525 1525 GOL GOL A . K 6 HOH 1 2001 2001 HOH HOH A . K 6 HOH 2 2002 2002 HOH HOH A . K 6 HOH 3 2003 2003 HOH HOH A . K 6 HOH 4 2004 2004 HOH HOH A . K 6 HOH 5 2005 2005 HOH HOH A . K 6 HOH 6 2006 2006 HOH HOH A . K 6 HOH 7 2007 2007 HOH HOH A . K 6 HOH 8 2008 2008 HOH HOH A . K 6 HOH 9 2009 2009 HOH HOH A . K 6 HOH 10 2010 2010 HOH HOH A . K 6 HOH 11 2011 2011 HOH HOH A . K 6 HOH 12 2012 2012 HOH HOH A . K 6 HOH 13 2013 2013 HOH HOH A . K 6 HOH 14 2014 2014 HOH HOH A . K 6 HOH 15 2015 2015 HOH HOH A . K 6 HOH 16 2016 2016 HOH HOH A . K 6 HOH 17 2017 2017 HOH HOH A . K 6 HOH 18 2018 2018 HOH HOH A . K 6 HOH 19 2019 2019 HOH HOH A . K 6 HOH 20 2020 2020 HOH HOH A . K 6 HOH 21 2021 2021 HOH HOH A . K 6 HOH 22 2022 2022 HOH HOH A . K 6 HOH 23 2023 2023 HOH HOH A . K 6 HOH 24 2024 2024 HOH HOH A . K 6 HOH 25 2025 2025 HOH HOH A . K 6 HOH 26 2026 2026 HOH HOH A . K 6 HOH 27 2027 2027 HOH HOH A . K 6 HOH 28 2028 2028 HOH HOH A . K 6 HOH 29 2029 2029 HOH HOH A . K 6 HOH 30 2030 2030 HOH HOH A . K 6 HOH 31 2031 2031 HOH HOH A . K 6 HOH 32 2032 2032 HOH HOH A . K 6 HOH 33 2033 2033 HOH HOH A . K 6 HOH 34 2034 2034 HOH HOH A . K 6 HOH 35 2035 2035 HOH HOH A . K 6 HOH 36 2036 2036 HOH HOH A . K 6 HOH 37 2037 2037 HOH HOH A . K 6 HOH 38 2038 2038 HOH HOH A . K 6 HOH 39 2039 2039 HOH HOH A . K 6 HOH 40 2040 2040 HOH HOH A . K 6 HOH 41 2041 2041 HOH HOH A . K 6 HOH 42 2042 2042 HOH HOH A . K 6 HOH 43 2043 2043 HOH HOH A . K 6 HOH 44 2044 2044 HOH HOH A . K 6 HOH 45 2045 2045 HOH HOH A . K 6 HOH 46 2046 2046 HOH HOH A . K 6 HOH 47 2047 2047 HOH HOH A . K 6 HOH 48 2048 2048 HOH HOH A . K 6 HOH 49 2049 2049 HOH HOH A . K 6 HOH 50 2050 2050 HOH HOH A . K 6 HOH 51 2051 2051 HOH HOH A . K 6 HOH 52 2052 2052 HOH HOH A . K 6 HOH 53 2053 2053 HOH HOH A . K 6 HOH 54 2054 2054 HOH HOH A . K 6 HOH 55 2055 2055 HOH HOH A . K 6 HOH 56 2056 2056 HOH HOH A . K 6 HOH 57 2057 2057 HOH HOH A . K 6 HOH 58 2058 2058 HOH HOH A . K 6 HOH 59 2059 2059 HOH HOH A . K 6 HOH 60 2060 2060 HOH HOH A . K 6 HOH 61 2061 2061 HOH HOH A . K 6 HOH 62 2062 2062 HOH HOH A . K 6 HOH 63 2063 2063 HOH HOH A . K 6 HOH 64 2064 2064 HOH HOH A . K 6 HOH 65 2065 2065 HOH HOH A . K 6 HOH 66 2066 2066 HOH HOH A . K 6 HOH 67 2067 2067 HOH HOH A . K 6 HOH 68 2068 2068 HOH HOH A . K 6 HOH 69 2069 2069 HOH HOH A . K 6 HOH 70 2070 2070 HOH HOH A . K 6 HOH 71 2071 2071 HOH HOH A . K 6 HOH 72 2072 2072 HOH HOH A . K 6 HOH 73 2073 2073 HOH HOH A . K 6 HOH 74 2074 2074 HOH HOH A . K 6 HOH 75 2075 2075 HOH HOH A . K 6 HOH 76 2076 2076 HOH HOH A . K 6 HOH 77 2077 2077 HOH HOH A . K 6 HOH 78 2078 2078 HOH HOH A . K 6 HOH 79 2079 2079 HOH HOH A . K 6 HOH 80 2080 2080 HOH HOH A . K 6 HOH 81 2081 2081 HOH HOH A . K 6 HOH 82 2082 2082 HOH HOH A . K 6 HOH 83 2083 2083 HOH HOH A . K 6 HOH 84 2084 2084 HOH HOH A . K 6 HOH 85 2085 2085 HOH HOH A . K 6 HOH 86 2086 2086 HOH HOH A . K 6 HOH 87 2087 2087 HOH HOH A . K 6 HOH 88 2088 2088 HOH HOH A . K 6 HOH 89 2089 2089 HOH HOH A . K 6 HOH 90 2090 2090 HOH HOH A . K 6 HOH 91 2091 2091 HOH HOH A . K 6 HOH 92 2092 2092 HOH HOH A . K 6 HOH 93 2093 2093 HOH HOH A . K 6 HOH 94 2094 2094 HOH HOH A . K 6 HOH 95 2095 2095 HOH HOH A . K 6 HOH 96 2096 2096 HOH HOH A . K 6 HOH 97 2097 2097 HOH HOH A . K 6 HOH 98 2098 2098 HOH HOH A . K 6 HOH 99 2099 2099 HOH HOH A . K 6 HOH 100 2100 2100 HOH HOH A . K 6 HOH 101 2101 2101 HOH HOH A . K 6 HOH 102 2102 2102 HOH HOH A . K 6 HOH 103 2103 2103 HOH HOH A . K 6 HOH 104 2104 2104 HOH HOH A . K 6 HOH 105 2105 2105 HOH HOH A . K 6 HOH 106 2106 2106 HOH HOH A . K 6 HOH 107 2107 2107 HOH HOH A . K 6 HOH 108 2108 2108 HOH HOH A . K 6 HOH 109 2109 2109 HOH HOH A . K 6 HOH 110 2110 2110 HOH HOH A . K 6 HOH 111 2111 2111 HOH HOH A . K 6 HOH 112 2112 2112 HOH HOH A . K 6 HOH 113 2113 2113 HOH HOH A . K 6 HOH 114 2114 2114 HOH HOH A . K 6 HOH 115 2115 2115 HOH HOH A . K 6 HOH 116 2116 2116 HOH HOH A . K 6 HOH 117 2117 2117 HOH HOH A . K 6 HOH 118 2118 2118 HOH HOH A . K 6 HOH 119 2119 2119 HOH HOH A . K 6 HOH 120 2120 2120 HOH HOH A . K 6 HOH 121 2121 2121 HOH HOH A . K 6 HOH 122 2122 2122 HOH HOH A . K 6 HOH 123 2123 2123 HOH HOH A . K 6 HOH 124 2124 2124 HOH HOH A . K 6 HOH 125 2125 2125 HOH HOH A . K 6 HOH 126 2126 2126 HOH HOH A . K 6 HOH 127 2127 2127 HOH HOH A . K 6 HOH 128 2128 2128 HOH HOH A . K 6 HOH 129 2129 2129 HOH HOH A . K 6 HOH 130 2130 2130 HOH HOH A . K 6 HOH 131 2131 2131 HOH HOH A . K 6 HOH 132 2132 2132 HOH HOH A . K 6 HOH 133 2133 2133 HOH HOH A . K 6 HOH 134 2134 2134 HOH HOH A . K 6 HOH 135 2135 2135 HOH HOH A . K 6 HOH 136 2136 2136 HOH HOH A . K 6 HOH 137 2137 2137 HOH HOH A . K 6 HOH 138 2138 2138 HOH HOH A . K 6 HOH 139 2139 2139 HOH HOH A . K 6 HOH 140 2140 2140 HOH HOH A . K 6 HOH 141 2141 2141 HOH HOH A . K 6 HOH 142 2142 2142 HOH HOH A . K 6 HOH 143 2143 2143 HOH HOH A . K 6 HOH 144 2144 2144 HOH HOH A . K 6 HOH 145 2145 2145 HOH HOH A . K 6 HOH 146 2146 2146 HOH HOH A . K 6 HOH 147 2147 2147 HOH HOH A . K 6 HOH 148 2148 2148 HOH HOH A . K 6 HOH 149 2149 2149 HOH HOH A . K 6 HOH 150 2150 2150 HOH HOH A . K 6 HOH 151 2151 2151 HOH HOH A . K 6 HOH 152 2152 2152 HOH HOH A . K 6 HOH 153 2153 2153 HOH HOH A . K 6 HOH 154 2154 2154 HOH HOH A . K 6 HOH 155 2155 2155 HOH HOH A . K 6 HOH 156 2156 2156 HOH HOH A . K 6 HOH 157 2157 2157 HOH HOH A . K 6 HOH 158 2158 2158 HOH HOH A . K 6 HOH 159 2159 2159 HOH HOH A . K 6 HOH 160 2160 2160 HOH HOH A . K 6 HOH 161 2161 2161 HOH HOH A . K 6 HOH 162 2162 2162 HOH HOH A . K 6 HOH 163 2163 2163 HOH HOH A . K 6 HOH 164 2164 2164 HOH HOH A . K 6 HOH 165 2165 2165 HOH HOH A . K 6 HOH 166 2166 2166 HOH HOH A . K 6 HOH 167 2167 2167 HOH HOH A . K 6 HOH 168 2168 2168 HOH HOH A . K 6 HOH 169 2169 2169 HOH HOH A . K 6 HOH 170 2170 2170 HOH HOH A . K 6 HOH 171 2171 2171 HOH HOH A . K 6 HOH 172 2172 2172 HOH HOH A . K 6 HOH 173 2173 2173 HOH HOH A . K 6 HOH 174 2174 2174 HOH HOH A . K 6 HOH 175 2175 2175 HOH HOH A . K 6 HOH 176 2176 2176 HOH HOH A . K 6 HOH 177 2177 2177 HOH HOH A . K 6 HOH 178 2178 2178 HOH HOH A . K 6 HOH 179 2179 2179 HOH HOH A . K 6 HOH 180 2180 2180 HOH HOH A . K 6 HOH 181 2181 2181 HOH HOH A . K 6 HOH 182 2182 2182 HOH HOH A . K 6 HOH 183 2183 2183 HOH HOH A . K 6 HOH 184 2184 2184 HOH HOH A . K 6 HOH 185 2185 2185 HOH HOH A . K 6 HOH 186 2186 2186 HOH HOH A . K 6 HOH 187 2187 2187 HOH HOH A . K 6 HOH 188 2188 2188 HOH HOH A . K 6 HOH 189 2189 2189 HOH HOH A . K 6 HOH 190 2190 2190 HOH HOH A . K 6 HOH 191 2191 2191 HOH HOH A . K 6 HOH 192 2192 2192 HOH HOH A . K 6 HOH 193 2193 2193 HOH HOH A . K 6 HOH 194 2194 2194 HOH HOH A . K 6 HOH 195 2195 2195 HOH HOH A . K 6 HOH 196 2196 2196 HOH HOH A . K 6 HOH 197 2197 2197 HOH HOH A . K 6 HOH 198 2198 2198 HOH HOH A . K 6 HOH 199 2199 2199 HOH HOH A . K 6 HOH 200 2200 2200 HOH HOH A . K 6 HOH 201 2201 2201 HOH HOH A . K 6 HOH 202 2202 2202 HOH HOH A . K 6 HOH 203 2203 2203 HOH HOH A . K 6 HOH 204 2204 2204 HOH HOH A . K 6 HOH 205 2205 2205 HOH HOH A . K 6 HOH 206 2206 2206 HOH HOH A . K 6 HOH 207 2207 2207 HOH HOH A . K 6 HOH 208 2208 2208 HOH HOH A . K 6 HOH 209 2209 2209 HOH HOH A . K 6 HOH 210 2210 2210 HOH HOH A . L 6 HOH 1 2001 2001 HOH HOH E . L 6 HOH 2 2002 2002 HOH HOH E . L 6 HOH 3 2003 2003 HOH HOH E . L 6 HOH 4 2004 2004 HOH HOH E . L 6 HOH 5 2005 2005 HOH HOH E . L 6 HOH 6 2006 2006 HOH HOH E . L 6 HOH 7 2007 2007 HOH HOH E . L 6 HOH 8 2008 2008 HOH HOH E . M 6 HOH 1 2001 2001 HOH HOH F . M 6 HOH 2 2002 2002 HOH HOH F . M 6 HOH 3 2003 2003 HOH HOH F . M 6 HOH 4 2004 2004 HOH HOH F . M 6 HOH 5 2005 2005 HOH HOH F . M 6 HOH 6 2006 2006 HOH HOH F . M 6 HOH 7 2007 2007 HOH HOH F . M 6 HOH 8 2008 2008 HOH HOH F . M 6 HOH 9 2009 2009 HOH HOH F . M 6 HOH 10 2010 2010 HOH HOH F . M 6 HOH 11 2011 2011 HOH HOH F . N 6 HOH 1 2001 2001 HOH HOH G . N 6 HOH 2 2002 2002 HOH HOH G . N 6 HOH 3 2003 2003 HOH HOH G . N 6 HOH 4 2004 2004 HOH HOH G . N 6 HOH 5 2005 2005 HOH HOH G . N 6 HOH 6 2006 2006 HOH HOH G . N 6 HOH 7 2007 2007 HOH HOH G . O 6 HOH 1 2001 2001 HOH HOH H . O 6 HOH 2 2002 2002 HOH HOH H . O 6 HOH 3 2003 2003 HOH HOH H . O 6 HOH 4 2004 2004 HOH HOH H . O 6 HOH 5 2005 2005 HOH HOH H . O 6 HOH 6 2006 2006 HOH HOH H . O 6 HOH 7 2007 2007 HOH HOH H . O 6 HOH 8 2008 2008 HOH HOH H . O 6 HOH 9 2009 2009 HOH HOH H . P 6 HOH 1 2001 2001 HOH HOH I . P 6 HOH 2 2002 2002 HOH HOH I . P 6 HOH 3 2003 2003 HOH HOH I . P 6 HOH 4 2004 2004 HOH HOH I . P 6 HOH 5 2005 2005 HOH HOH I . P 6 HOH 6 2006 2006 HOH HOH I . P 6 HOH 7 2007 2007 HOH HOH I . P 6 HOH 8 2008 2008 HOH HOH I . # _pdbx_struct_mod_residue.id 1 _pdbx_struct_mod_residue.label_asym_id A _pdbx_struct_mod_residue.label_comp_id CSX _pdbx_struct_mod_residue.label_seq_id 344 _pdbx_struct_mod_residue.auth_asym_id A _pdbx_struct_mod_residue.auth_comp_id CSX _pdbx_struct_mod_residue.auth_seq_id 450 _pdbx_struct_mod_residue.PDB_ins_code ? _pdbx_struct_mod_residue.parent_comp_id CYS _pdbx_struct_mod_residue.details 'S-OXY CYSTEINE' # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OG ? A SER 272 ? A SER 378 ? 1_555 MN ? G MN . ? A MN 901 ? 1_555 O1B ? I ADP . ? A ADP 1524 ? 1_555 91.5 ? 2 OG ? A SER 272 ? A SER 378 ? 1_555 MN ? G MN . ? A MN 901 ? 1_555 O ? K HOH . ? A HOH 2104 ? 1_555 84.2 ? 3 O1B ? I ADP . ? A ADP 1524 ? 1_555 MN ? G MN . ? A MN 901 ? 1_555 O ? K HOH . ? A HOH 2104 ? 1_555 173.7 ? 4 OG ? A SER 272 ? A SER 378 ? 1_555 MN ? G MN . ? A MN 901 ? 1_555 O ? K HOH . ? A HOH 2105 ? 1_555 88.6 ? 5 O1B ? I ADP . ? A ADP 1524 ? 1_555 MN ? G MN . ? A MN 901 ? 1_555 O ? K HOH . ? A HOH 2105 ? 1_555 84.6 ? 6 O ? K HOH . ? A HOH 2104 ? 1_555 MN ? G MN . ? A MN 901 ? 1_555 O ? K HOH . ? A HOH 2105 ? 1_555 90.8 ? 7 OG ? A SER 272 ? A SER 378 ? 1_555 MN ? G MN . ? A MN 901 ? 1_555 O ? K HOH . ? A HOH 2106 ? 1_555 88.4 ? 8 O1B ? I ADP . ? A ADP 1524 ? 1_555 MN ? G MN . ? A MN 901 ? 1_555 O ? K HOH . ? A HOH 2106 ? 1_555 94.1 ? 9 O ? K HOH . ? A HOH 2104 ? 1_555 MN ? G MN . ? A MN 901 ? 1_555 O ? K HOH . ? A HOH 2106 ? 1_555 90.3 ? 10 O ? K HOH . ? A HOH 2105 ? 1_555 MN ? G MN . ? A MN 901 ? 1_555 O ? K HOH . ? A HOH 2106 ? 1_555 176.7 ? 11 OG ? A SER 272 ? A SER 378 ? 1_555 MN ? G MN . ? A MN 901 ? 1_555 O ? K HOH . ? A HOH 2208 ? 1_555 174.8 ? 12 O1B ? I ADP . ? A ADP 1524 ? 1_555 MN ? G MN . ? A MN 901 ? 1_555 O ? K HOH . ? A HOH 2208 ? 1_555 91.1 ? 13 O ? K HOH . ? A HOH 2104 ? 1_555 MN ? G MN . ? A MN 901 ? 1_555 O ? K HOH . ? A HOH 2208 ? 1_555 92.9 ? 14 O ? K HOH . ? A HOH 2105 ? 1_555 MN ? G MN . ? A MN 901 ? 1_555 O ? K HOH . ? A HOH 2208 ? 1_555 87.2 ? 15 O ? K HOH . ? A HOH 2106 ? 1_555 MN ? G MN . ? A MN 901 ? 1_555 O ? K HOH . ? A HOH 2208 ? 1_555 95.9 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2011-11-16 2 'Structure model' 1 1 2018-03-07 3 'Structure model' 1 2 2023-12-20 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 2 'Structure model' 'Source and taxonomy' 3 3 'Structure model' 'Data collection' 4 3 'Structure model' 'Database references' 5 3 'Structure model' 'Derived calculations' 6 3 'Structure model' Other 7 3 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' entity_src_gen 3 2 'Structure model' pdbx_entity_src_syn 4 3 'Structure model' chem_comp_atom 5 3 'Structure model' chem_comp_bond 6 3 'Structure model' database_2 7 3 'Structure model' pdbx_database_status 8 3 'Structure model' pdbx_initial_refinement_model 9 3 'Structure model' pdbx_struct_conn_angle 10 3 'Structure model' struct_conn 11 3 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.journal_abbrev' 2 2 'Structure model' '_citation.journal_id_ISSN' 3 2 'Structure model' '_citation.page_last' 4 2 'Structure model' '_citation.pdbx_database_id_DOI' 5 2 'Structure model' '_citation.title' 6 2 'Structure model' '_entity_src_gen.gene_src_common_name' 7 2 'Structure model' '_entity_src_gen.pdbx_gene_src_scientific_name' 8 2 'Structure model' '_entity_src_gen.pdbx_host_org_ncbi_taxonomy_id' 9 2 'Structure model' '_entity_src_gen.pdbx_host_org_scientific_name' 10 2 'Structure model' '_entity_src_gen.pdbx_host_org_strain' 11 2 'Structure model' '_entity_src_gen.pdbx_host_org_variant' 12 2 'Structure model' '_pdbx_entity_src_syn.ncbi_taxonomy_id' 13 2 'Structure model' '_pdbx_entity_src_syn.organism_scientific' 14 3 'Structure model' '_database_2.pdbx_DOI' 15 3 'Structure model' '_database_2.pdbx_database_accession' 16 3 'Structure model' '_pdbx_database_status.status_code_sf' 17 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 18 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 19 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 20 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 21 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 22 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 23 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 24 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 25 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 26 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 27 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 28 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 29 3 'Structure model' '_pdbx_struct_conn_angle.value' 30 3 'Structure model' '_struct_conn.pdbx_dist_value' 31 3 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 32 3 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 33 3 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 34 3 'Structure model' '_struct_conn.ptnr1_label_asym_id' 35 3 'Structure model' '_struct_conn.ptnr1_label_atom_id' 36 3 'Structure model' '_struct_conn.ptnr1_label_comp_id' 37 3 'Structure model' '_struct_conn.ptnr1_label_seq_id' 38 3 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 39 3 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 40 3 'Structure model' '_struct_conn.ptnr2_label_asym_id' 41 3 'Structure model' '_struct_conn.ptnr2_label_atom_id' 42 3 'Structure model' '_struct_conn.ptnr2_label_comp_id' 43 3 'Structure model' '_struct_conn.ptnr2_label_seq_id' 44 3 'Structure model' '_struct_site.pdbx_auth_asym_id' 45 3 'Structure model' '_struct_site.pdbx_auth_comp_id' 46 3 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal PHENIX refinement '(PHENIX.REFINE)' ? 1 iMOSFLM 'data reduction' . ? 2 SCALA 'data scaling' . ? 3 PHASER phasing . ? 4 # _pdbx_entry_details.entry_id 3ZVN _pdbx_entry_details.compound_details 'ENGINEERED RESIDUE IN CHAIN A, ASP 170 TO ASN' _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 "O3'" I DT 2 ? ? O I HOH 2003 ? ? 2.02 2 1 N1 E DA 4 ? ? O E HOH 2002 ? ? 2.04 3 1 OG A SER 180 ? ? OD2 A ASP 190 ? ? 2.06 4 1 O4 I DT 2 ? ? O E HOH 2005 ? ? 2.16 5 1 N4 H DC 3 ? ? O F HOH 2002 ? ? 2.17 6 1 OG A SER 387 ? ? O A HOH 2108 ? ? 2.17 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 C4 E DG 1 ? ? C5 E DG 1 ? ? 1.455 1.379 0.076 0.007 N 2 1 C5 E DG 1 ? ? C6 E DG 1 ? ? 1.479 1.419 0.060 0.010 N 3 1 C6 E DG 1 ? ? N1 E DG 1 ? ? 1.344 1.391 -0.047 0.007 N 4 1 C5 E DG 1 ? ? N7 E DG 1 ? ? 1.347 1.388 -0.041 0.006 N 5 1 N7 E DG 1 ? ? C8 E DG 1 ? ? 1.351 1.305 0.046 0.006 N 6 1 N9 E DG 1 ? ? C4 E DG 1 ? ? 1.324 1.375 -0.051 0.008 N 7 1 C4 F DG 1 ? ? C5 F DG 1 ? ? 1.465 1.379 0.086 0.007 N 8 1 C5 F DG 1 ? ? C6 F DG 1 ? ? 1.483 1.419 0.064 0.010 N 9 1 C6 F DG 1 ? ? N1 F DG 1 ? ? 1.341 1.391 -0.050 0.007 N 10 1 C5 F DG 1 ? ? N7 F DG 1 ? ? 1.350 1.388 -0.038 0.006 N 11 1 N7 F DG 1 ? ? C8 F DG 1 ? ? 1.366 1.305 0.061 0.006 N 12 1 C4 G DG 1 ? ? C5 G DG 1 ? ? 1.467 1.379 0.088 0.007 N 13 1 C6 G DG 1 ? ? N1 G DG 1 ? ? 1.342 1.391 -0.049 0.007 N 14 1 C5 G DG 1 ? ? N7 G DG 1 ? ? 1.349 1.388 -0.039 0.006 N 15 1 N7 G DG 1 ? ? C8 G DG 1 ? ? 1.361 1.305 0.056 0.006 N 16 1 C4 H DG 1 ? ? C5 H DG 1 ? ? 1.466 1.379 0.087 0.007 N 17 1 C5 H DG 1 ? ? C6 H DG 1 ? ? 1.481 1.419 0.062 0.010 N 18 1 C6 H DG 1 ? ? N1 H DG 1 ? ? 1.339 1.391 -0.052 0.007 N 19 1 C5 H DG 1 ? ? N7 H DG 1 ? ? 1.344 1.388 -0.044 0.006 N 20 1 N7 H DG 1 ? ? C8 H DG 1 ? ? 1.360 1.305 0.055 0.006 N 21 1 C4 I DG 1 ? ? C5 I DG 1 ? ? 1.469 1.379 0.090 0.007 N 22 1 C6 I DG 1 ? ? N1 I DG 1 ? ? 1.341 1.391 -0.050 0.007 N 23 1 C5 I DG 1 ? ? N7 I DG 1 ? ? 1.348 1.388 -0.040 0.006 N 24 1 N7 I DG 1 ? ? C8 I DG 1 ? ? 1.357 1.305 0.052 0.006 N 25 1 N9 I DG 1 ? ? C4 I DG 1 ? ? 1.324 1.375 -0.051 0.008 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 C2 E DG 1 ? ? N3 E DG 1 ? ? C4 E DG 1 ? ? 120.40 111.90 8.50 0.50 N 2 1 N3 E DG 1 ? ? C4 E DG 1 ? ? C5 E DG 1 ? ? 120.22 128.60 -8.38 0.50 N 3 1 C5 E DG 1 ? ? C6 E DG 1 ? ? N1 E DG 1 ? ? 118.65 111.50 7.15 0.50 N 4 1 C4 E DG 1 ? ? C5 E DG 1 ? ? N7 E DG 1 ? ? 107.05 110.80 -3.75 0.40 N 5 1 C5 E DG 1 ? ? N7 E DG 1 ? ? C8 E DG 1 ? ? 107.39 104.30 3.09 0.50 N 6 1 C8 E DG 1 ? ? N9 E DG 1 ? ? C4 E DG 1 ? ? 109.42 106.40 3.02 0.40 N 7 1 N3 E DG 1 ? ? C4 E DG 1 ? ? N9 E DG 1 ? ? 133.91 126.00 7.91 0.60 N 8 1 C6 E DG 1 ? ? C5 E DG 1 ? ? N7 E DG 1 ? ? 136.62 130.40 6.22 0.60 N 9 1 C5 E DG 1 ? ? C6 E DG 1 ? ? O6 E DG 1 ? ? 120.10 128.60 -8.50 0.60 N 10 1 "O4'" E DC 3 ? ? "C1'" E DC 3 ? ? N1 E DC 3 ? ? 114.74 108.30 6.44 0.30 N 11 1 C2 F DG 1 ? ? N3 F DG 1 ? ? C4 F DG 1 ? ? 120.74 111.90 8.84 0.50 N 12 1 N3 F DG 1 ? ? C4 F DG 1 ? ? C5 F DG 1 ? ? 119.47 128.60 -9.13 0.50 N 13 1 C5 F DG 1 ? ? C6 F DG 1 ? ? N1 F DG 1 ? ? 117.69 111.50 6.19 0.50 N 14 1 C4 F DG 1 ? ? C5 F DG 1 ? ? N7 F DG 1 ? ? 106.42 110.80 -4.38 0.40 N 15 1 N3 F DG 1 ? ? C4 F DG 1 ? ? N9 F DG 1 ? ? 133.51 126.00 7.51 0.60 N 16 1 C6 F DG 1 ? ? C5 F DG 1 ? ? N7 F DG 1 ? ? 136.89 130.40 6.49 0.60 N 17 1 C5 F DG 1 ? ? C6 F DG 1 ? ? O6 F DG 1 ? ? 122.01 128.60 -6.59 0.60 N 18 1 "O4'" F DC 5 ? ? "C1'" F DC 5 ? ? N1 F DC 5 ? ? 110.31 108.30 2.01 0.30 N 19 1 C2 G DG 1 ? ? N3 G DG 1 ? ? C4 G DG 1 ? ? 120.63 111.90 8.73 0.50 N 20 1 N3 G DG 1 ? ? C4 G DG 1 ? ? C5 G DG 1 ? ? 119.43 128.60 -9.17 0.50 N 21 1 C5 G DG 1 ? ? C6 G DG 1 ? ? N1 G DG 1 ? ? 117.91 111.50 6.41 0.50 N 22 1 C4 G DG 1 ? ? C5 G DG 1 ? ? N7 G DG 1 ? ? 106.83 110.80 -3.97 0.40 N 23 1 C5 G DG 1 ? ? N7 G DG 1 ? ? C8 G DG 1 ? ? 107.56 104.30 3.26 0.50 N 24 1 C8 G DG 1 ? ? N9 G DG 1 ? ? C4 G DG 1 ? ? 108.99 106.40 2.59 0.40 N 25 1 N3 G DG 1 ? ? C4 G DG 1 ? ? N9 G DG 1 ? ? 134.48 126.00 8.48 0.60 N 26 1 C6 G DG 1 ? ? C5 G DG 1 ? ? N7 G DG 1 ? ? 136.22 130.40 5.82 0.60 N 27 1 C5 G DG 1 ? ? C6 G DG 1 ? ? O6 G DG 1 ? ? 120.90 128.60 -7.70 0.60 N 28 1 "O4'" G DC 5 ? ? "C1'" G DC 5 ? ? N1 G DC 5 ? ? 110.19 108.30 1.89 0.30 N 29 1 "O4'" H DG 1 ? ? "C1'" H DG 1 ? ? N9 H DG 1 ? ? 110.18 108.30 1.88 0.30 N 30 1 C2 H DG 1 ? ? N3 H DG 1 ? ? C4 H DG 1 ? ? 120.57 111.90 8.67 0.50 N 31 1 N3 H DG 1 ? ? C4 H DG 1 ? ? C5 H DG 1 ? ? 118.97 128.60 -9.63 0.50 N 32 1 C5 H DG 1 ? ? C6 H DG 1 ? ? N1 H DG 1 ? ? 117.36 111.50 5.86 0.50 N 33 1 C4 H DG 1 ? ? C5 H DG 1 ? ? N7 H DG 1 ? ? 106.07 110.80 -4.73 0.40 N 34 1 C5 H DG 1 ? ? N7 H DG 1 ? ? C8 H DG 1 ? ? 108.19 104.30 3.89 0.50 N 35 1 N3 H DG 1 ? ? C4 H DG 1 ? ? N9 H DG 1 ? ? 134.19 126.00 8.19 0.60 N 36 1 C6 H DG 1 ? ? C5 H DG 1 ? ? N7 H DG 1 ? ? 136.35 130.40 5.95 0.60 N 37 1 C5 H DG 1 ? ? C6 H DG 1 ? ? O6 H DG 1 ? ? 121.31 128.60 -7.29 0.60 N 38 1 "O4'" H DC 3 ? ? "C1'" H DC 3 ? ? N1 H DC 3 ? ? 102.42 108.00 -5.58 0.70 N 39 1 "C1'" H DC 5 ? ? "O4'" H DC 5 ? ? "C4'" H DC 5 ? ? 103.91 110.10 -6.19 1.00 N 40 1 "O4'" I DG 1 ? ? "C1'" I DG 1 ? ? N9 I DG 1 ? ? 111.52 108.30 3.22 0.30 N 41 1 C2 I DG 1 ? ? N3 I DG 1 ? ? C4 I DG 1 ? ? 120.02 111.90 8.12 0.50 N 42 1 N3 I DG 1 ? ? C4 I DG 1 ? ? C5 I DG 1 ? ? 120.28 128.60 -8.32 0.50 N 43 1 C5 I DG 1 ? ? C6 I DG 1 ? ? N1 I DG 1 ? ? 117.68 111.50 6.18 0.50 N 44 1 C4 I DG 1 ? ? C5 I DG 1 ? ? N7 I DG 1 ? ? 106.96 110.80 -3.84 0.40 N 45 1 C5 I DG 1 ? ? N7 I DG 1 ? ? C8 I DG 1 ? ? 107.35 104.30 3.05 0.50 N 46 1 C8 I DG 1 ? ? N9 I DG 1 ? ? C4 I DG 1 ? ? 109.64 106.40 3.24 0.40 N 47 1 N3 I DG 1 ? ? C4 I DG 1 ? ? N9 I DG 1 ? ? 134.01 126.00 8.01 0.60 N 48 1 C6 I DG 1 ? ? C5 I DG 1 ? ? N7 I DG 1 ? ? 136.79 130.40 6.39 0.60 N 49 1 C5 I DG 1 ? ? C6 I DG 1 ? ? O6 I DG 1 ? ? 121.01 128.60 -7.59 0.60 N 50 1 "O4'" I DC 3 ? ? "C1'" I DC 3 ? ? N1 I DC 3 ? ? 110.90 108.30 2.60 0.30 N 51 1 "O4'" I DA 4 ? ? "C1'" I DA 4 ? ? N9 I DA 4 ? ? 103.08 108.00 -4.92 0.70 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LEU A 149 ? ? -105.09 -166.27 2 1 LEU A 171 ? ? -84.54 -81.50 3 1 THR A 174 ? ? -123.55 -52.32 4 1 GLU A 274 ? ? -90.63 43.69 5 1 PRO A 277 ? ? -47.15 159.80 6 1 ASN A 424 ? ? 37.03 61.34 7 1 GLU A 506 ? ? -53.25 -73.62 8 1 HIS A 507 ? ? -91.49 34.03 # _pdbx_distant_solvent_atoms.id 1 _pdbx_distant_solvent_atoms.PDB_model_num 1 _pdbx_distant_solvent_atoms.auth_atom_id O _pdbx_distant_solvent_atoms.label_alt_id ? _pdbx_distant_solvent_atoms.auth_asym_id A _pdbx_distant_solvent_atoms.auth_comp_id HOH _pdbx_distant_solvent_atoms.auth_seq_id 2023 _pdbx_distant_solvent_atoms.PDB_ins_code ? _pdbx_distant_solvent_atoms.neighbor_macromolecule_distance 5.99 _pdbx_distant_solvent_atoms.neighbor_ligand_distance . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LEU 149 ? CG ? A LEU 43 CG 2 1 Y 1 A LEU 149 ? CD1 ? A LEU 43 CD1 3 1 Y 1 A LEU 149 ? CD2 ? A LEU 43 CD2 4 1 Y 1 A LYS 150 ? CG ? A LYS 44 CG 5 1 Y 1 A LYS 150 ? CD ? A LYS 44 CD 6 1 Y 1 A LYS 150 ? CE ? A LYS 44 CE 7 1 Y 1 A LYS 150 ? NZ ? A LYS 44 NZ 8 1 Y 1 A LYS 151 ? CD ? A LYS 45 CD 9 1 Y 1 A LYS 151 ? CE ? A LYS 45 CE 10 1 Y 1 A LYS 151 ? NZ ? A LYS 45 NZ 11 1 Y 1 A SER 158 ? OG ? A SER 52 OG 12 1 Y 1 A LYS 161 ? CG ? A LYS 55 CG 13 1 Y 1 A LYS 161 ? CD ? A LYS 55 CD 14 1 Y 1 A LYS 161 ? CE ? A LYS 55 CE 15 1 Y 1 A LYS 161 ? NZ ? A LYS 55 NZ 16 1 Y 1 A LEU 226 ? CG ? A LEU 120 CG 17 1 Y 1 A LEU 226 ? CD1 ? A LEU 120 CD1 18 1 Y 1 A LEU 226 ? CD2 ? A LEU 120 CD2 19 1 Y 1 A GLU 229 ? CG ? A GLU 123 CG 20 1 Y 1 A GLU 229 ? CD ? A GLU 123 CD 21 1 Y 1 A GLU 229 ? OE1 ? A GLU 123 OE1 22 1 Y 1 A GLU 229 ? OE2 ? A GLU 123 OE2 23 1 Y 1 A LEU 268 ? CG ? A LEU 162 CG 24 1 Y 1 A LEU 268 ? CD1 ? A LEU 162 CD1 25 1 Y 1 A LEU 268 ? CD2 ? A LEU 162 CD2 26 1 Y 1 A LYS 301 ? CG ? A LYS 195 CG 27 1 Y 1 A LYS 301 ? CD ? A LYS 195 CD 28 1 Y 1 A LYS 301 ? CE ? A LYS 195 CE 29 1 Y 1 A LYS 301 ? NZ ? A LYS 195 NZ 30 1 Y 1 A LYS 302 ? CG ? A LYS 196 CG 31 1 Y 1 A LYS 302 ? CD ? A LYS 196 CD 32 1 Y 1 A LYS 302 ? CE ? A LYS 196 CE 33 1 Y 1 A LYS 302 ? NZ ? A LYS 196 NZ 34 1 Y 1 A ARG 334 ? CG ? A ARG 228 CG 35 1 Y 1 A ARG 334 ? CD ? A ARG 228 CD 36 1 Y 1 A ARG 334 ? NE ? A ARG 228 NE 37 1 Y 1 A ARG 334 ? CZ ? A ARG 228 CZ 38 1 Y 1 A ARG 334 ? NH1 ? A ARG 228 NH1 39 1 Y 1 A ARG 334 ? NH2 ? A ARG 228 NH2 40 1 Y 1 A GLU 499 ? CD ? A GLU 393 CD 41 1 Y 1 A GLU 499 ? OE1 ? A GLU 393 OE1 42 1 Y 1 A GLU 499 ? OE2 ? A GLU 393 OE2 43 1 Y 1 A GLN 513 ? CG ? A GLN 407 CG 44 1 Y 1 A GLN 513 ? CD ? A GLN 407 CD 45 1 Y 1 A GLN 513 ? OE1 ? A GLN 407 OE1 46 1 Y 1 A GLN 513 ? NE2 ? A GLN 407 NE2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 107 ? A GLY 1 2 1 Y 1 A PRO 108 ? A PRO 2 3 1 Y 1 A HIS 109 ? A HIS 3 4 1 Y 1 A MET 110 ? A MET 4 5 1 Y 1 A THR 111 ? A THR 5 6 1 Y 1 A SER 112 ? A SER 6 7 1 Y 1 A GLY 113 ? A GLY 7 8 1 Y 1 A SER 114 ? A SER 8 9 1 Y 1 A GLN 115 ? A GLN 9 10 1 Y 1 A PRO 116 ? A PRO 10 11 1 Y 1 A ASP 117 ? A ASP 11 12 1 Y 1 A ALA 118 ? A ALA 12 13 1 Y 1 A PRO 119 ? A PRO 13 14 1 Y 1 A PRO 120 ? A PRO 14 15 1 Y 1 A ASP 121 ? A ASP 15 16 1 Y 1 A THR 122 ? A THR 16 17 1 Y 1 A PRO 123 ? A PRO 17 18 1 Y 1 A GLY 124 ? A GLY 18 19 1 Y 1 A ASP 125 ? A ASP 19 20 1 Y 1 A PRO 126 ? A PRO 20 21 1 Y 1 A GLU 127 ? A GLU 21 22 1 Y 1 A GLU 128 ? A GLU 22 23 1 Y 1 A GLY 129 ? A GLY 23 24 1 Y 1 A GLU 130 ? A GLU 24 25 1 Y 1 A ASP 131 ? A ASP 25 26 1 Y 1 A THR 132 ? A THR 26 27 1 Y 1 A GLU 133 ? A GLU 27 28 1 Y 1 A PRO 134 ? A PRO 28 29 1 Y 1 A GLN 135 ? A GLN 29 30 1 Y 1 A LYS 136 ? A LYS 30 31 1 Y 1 A LYS 137 ? A LYS 31 32 1 Y 1 A ARG 138 ? A ARG 32 33 1 Y 1 A VAL 139 ? A VAL 33 34 1 Y 1 A ARG 140 ? A ARG 34 35 1 Y 1 A LYS 141 ? A LYS 35 36 1 Y 1 A SER 142 ? A SER 36 37 1 Y 1 A SER 143 ? A SER 37 38 1 Y 1 A LEU 144 ? A LEU 38 39 1 Y 1 A GLY 145 ? A GLY 39 40 1 Y 1 E DC 5 ? B DC 5 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ADP PB P N N 1 ADP O1B O N N 2 ADP O2B O N N 3 ADP O3B O N N 4 ADP PA P N S 5 ADP O1A O N N 6 ADP O2A O N N 7 ADP O3A O N N 8 ADP "O5'" O N N 9 ADP "C5'" C N N 10 ADP "C4'" C N R 11 ADP "O4'" O N N 12 ADP "C3'" C N S 13 ADP "O3'" O N N 14 ADP "C2'" C N R 15 ADP "O2'" O N N 16 ADP "C1'" C N R 17 ADP N9 N Y N 18 ADP C8 C Y N 19 ADP N7 N Y N 20 ADP C5 C Y N 21 ADP C6 C Y N 22 ADP N6 N N N 23 ADP N1 N Y N 24 ADP C2 C Y N 25 ADP N3 N Y N 26 ADP C4 C Y N 27 ADP HOB2 H N N 28 ADP HOB3 H N N 29 ADP HOA2 H N N 30 ADP "H5'1" H N N 31 ADP "H5'2" H N N 32 ADP "H4'" H N N 33 ADP "H3'" H N N 34 ADP "HO3'" H N N 35 ADP "H2'" H N N 36 ADP "HO2'" H N N 37 ADP "H1'" H N N 38 ADP H8 H N N 39 ADP HN61 H N N 40 ADP HN62 H N N 41 ADP H2 H N N 42 ALA N N N N 43 ALA CA C N S 44 ALA C C N N 45 ALA O O N N 46 ALA CB C N N 47 ALA OXT O N N 48 ALA H H N N 49 ALA H2 H N N 50 ALA HA H N N 51 ALA HB1 H N N 52 ALA HB2 H N N 53 ALA HB3 H N N 54 ALA HXT H N N 55 ARG N N N N 56 ARG CA C N S 57 ARG C C N N 58 ARG O O N N 59 ARG CB C N N 60 ARG CG C N N 61 ARG CD C N N 62 ARG NE N N N 63 ARG CZ C N N 64 ARG NH1 N N N 65 ARG NH2 N N N 66 ARG OXT O N N 67 ARG H H N N 68 ARG H2 H N N 69 ARG HA H N N 70 ARG HB2 H N N 71 ARG HB3 H N N 72 ARG HG2 H N N 73 ARG HG3 H N N 74 ARG HD2 H N N 75 ARG HD3 H N N 76 ARG HE H N N 77 ARG HH11 H N N 78 ARG HH12 H N N 79 ARG HH21 H N N 80 ARG HH22 H N N 81 ARG HXT H N N 82 ASN N N N N 83 ASN CA C N S 84 ASN C C N N 85 ASN O O N N 86 ASN CB C N N 87 ASN CG C N N 88 ASN OD1 O N N 89 ASN ND2 N N N 90 ASN OXT O N N 91 ASN H H N N 92 ASN H2 H N N 93 ASN HA H N N 94 ASN HB2 H N N 95 ASN HB3 H N N 96 ASN HD21 H N N 97 ASN HD22 H N N 98 ASN HXT H N N 99 ASP N N N N 100 ASP CA C N S 101 ASP C C N N 102 ASP O O N N 103 ASP CB C N N 104 ASP CG C N N 105 ASP OD1 O N N 106 ASP OD2 O N N 107 ASP OXT O N N 108 ASP H H N N 109 ASP H2 H N N 110 ASP HA H N N 111 ASP HB2 H N N 112 ASP HB3 H N N 113 ASP HD2 H N N 114 ASP HXT H N N 115 CSX N N N N 116 CSX CA C N R 117 CSX CB C N N 118 CSX SG S N S 119 CSX C C N N 120 CSX O O N N 121 CSX OXT O N N 122 CSX OD O N N 123 CSX H H N N 124 CSX H2 H N N 125 CSX HA H N N 126 CSX HB2 H N N 127 CSX HB3 H N N 128 CSX HG H N N 129 CSX HXT H N N 130 CYS N N N N 131 CYS CA C N R 132 CYS C C N N 133 CYS O O N N 134 CYS CB C N N 135 CYS SG S N N 136 CYS OXT O N N 137 CYS H H N N 138 CYS H2 H N N 139 CYS HA H N N 140 CYS HB2 H N N 141 CYS HB3 H N N 142 CYS HG H N N 143 CYS HXT H N N 144 DA OP3 O N N 145 DA P P N N 146 DA OP1 O N N 147 DA OP2 O N N 148 DA "O5'" O N N 149 DA "C5'" C N N 150 DA "C4'" C N R 151 DA "O4'" O N N 152 DA "C3'" C N S 153 DA "O3'" O N N 154 DA "C2'" C N N 155 DA "C1'" C N R 156 DA N9 N Y N 157 DA C8 C Y N 158 DA N7 N Y N 159 DA C5 C Y N 160 DA C6 C Y N 161 DA N6 N N N 162 DA N1 N Y N 163 DA C2 C Y N 164 DA N3 N Y N 165 DA C4 C Y N 166 DA HOP3 H N N 167 DA HOP2 H N N 168 DA "H5'" H N N 169 DA "H5''" H N N 170 DA "H4'" H N N 171 DA "H3'" H N N 172 DA "HO3'" H N N 173 DA "H2'" H N N 174 DA "H2''" H N N 175 DA "H1'" H N N 176 DA H8 H N N 177 DA H61 H N N 178 DA H62 H N N 179 DA H2 H N N 180 DC OP3 O N N 181 DC P P N N 182 DC OP1 O N N 183 DC OP2 O N N 184 DC "O5'" O N N 185 DC "C5'" C N N 186 DC "C4'" C N R 187 DC "O4'" O N N 188 DC "C3'" C N S 189 DC "O3'" O N N 190 DC "C2'" C N N 191 DC "C1'" C N R 192 DC N1 N N N 193 DC C2 C N N 194 DC O2 O N N 195 DC N3 N N N 196 DC C4 C N N 197 DC N4 N N N 198 DC C5 C N N 199 DC C6 C N N 200 DC HOP3 H N N 201 DC HOP2 H N N 202 DC "H5'" H N N 203 DC "H5''" H N N 204 DC "H4'" H N N 205 DC "H3'" H N N 206 DC "HO3'" H N N 207 DC "H2'" H N N 208 DC "H2''" H N N 209 DC "H1'" H N N 210 DC H41 H N N 211 DC H42 H N N 212 DC H5 H N N 213 DC H6 H N N 214 DG OP3 O N N 215 DG P P N N 216 DG OP1 O N N 217 DG OP2 O N N 218 DG "O5'" O N N 219 DG "C5'" C N N 220 DG "C4'" C N R 221 DG "O4'" O N N 222 DG "C3'" C N S 223 DG "O3'" O N N 224 DG "C2'" C N N 225 DG "C1'" C N R 226 DG N9 N Y N 227 DG C8 C Y N 228 DG N7 N Y N 229 DG C5 C Y N 230 DG C6 C N N 231 DG O6 O N N 232 DG N1 N N N 233 DG C2 C N N 234 DG N2 N N N 235 DG N3 N N N 236 DG C4 C Y N 237 DG HOP3 H N N 238 DG HOP2 H N N 239 DG "H5'" H N N 240 DG "H5''" H N N 241 DG "H4'" H N N 242 DG "H3'" H N N 243 DG "HO3'" H N N 244 DG "H2'" H N N 245 DG "H2''" H N N 246 DG "H1'" H N N 247 DG H8 H N N 248 DG H1 H N N 249 DG H21 H N N 250 DG H22 H N N 251 DT OP3 O N N 252 DT P P N N 253 DT OP1 O N N 254 DT OP2 O N N 255 DT "O5'" O N N 256 DT "C5'" C N N 257 DT "C4'" C N R 258 DT "O4'" O N N 259 DT "C3'" C N S 260 DT "O3'" O N N 261 DT "C2'" C N N 262 DT "C1'" C N R 263 DT N1 N N N 264 DT C2 C N N 265 DT O2 O N N 266 DT N3 N N N 267 DT C4 C N N 268 DT O4 O N N 269 DT C5 C N N 270 DT C7 C N N 271 DT C6 C N N 272 DT HOP3 H N N 273 DT HOP2 H N N 274 DT "H5'" H N N 275 DT "H5''" H N N 276 DT "H4'" H N N 277 DT "H3'" H N N 278 DT "HO3'" H N N 279 DT "H2'" H N N 280 DT "H2''" H N N 281 DT "H1'" H N N 282 DT H3 H N N 283 DT H71 H N N 284 DT H72 H N N 285 DT H73 H N N 286 DT H6 H N N 287 GLN N N N N 288 GLN CA C N S 289 GLN C C N N 290 GLN O O N N 291 GLN CB C N N 292 GLN CG C N N 293 GLN CD C N N 294 GLN OE1 O N N 295 GLN NE2 N N N 296 GLN OXT O N N 297 GLN H H N N 298 GLN H2 H N N 299 GLN HA H N N 300 GLN HB2 H N N 301 GLN HB3 H N N 302 GLN HG2 H N N 303 GLN HG3 H N N 304 GLN HE21 H N N 305 GLN HE22 H N N 306 GLN HXT H N N 307 GLU N N N N 308 GLU CA C N S 309 GLU C C N N 310 GLU O O N N 311 GLU CB C N N 312 GLU CG C N N 313 GLU CD C N N 314 GLU OE1 O N N 315 GLU OE2 O N N 316 GLU OXT O N N 317 GLU H H N N 318 GLU H2 H N N 319 GLU HA H N N 320 GLU HB2 H N N 321 GLU HB3 H N N 322 GLU HG2 H N N 323 GLU HG3 H N N 324 GLU HE2 H N N 325 GLU HXT H N N 326 GLY N N N N 327 GLY CA C N N 328 GLY C C N N 329 GLY O O N N 330 GLY OXT O N N 331 GLY H H N N 332 GLY H2 H N N 333 GLY HA2 H N N 334 GLY HA3 H N N 335 GLY HXT H N N 336 GOL C1 C N N 337 GOL O1 O N N 338 GOL C2 C N N 339 GOL O2 O N N 340 GOL C3 C N N 341 GOL O3 O N N 342 GOL H11 H N N 343 GOL H12 H N N 344 GOL HO1 H N N 345 GOL H2 H N N 346 GOL HO2 H N N 347 GOL H31 H N N 348 GOL H32 H N N 349 GOL HO3 H N N 350 HIS N N N N 351 HIS CA C N S 352 HIS C C N N 353 HIS O O N N 354 HIS CB C N N 355 HIS CG C Y N 356 HIS ND1 N Y N 357 HIS CD2 C Y N 358 HIS CE1 C Y N 359 HIS NE2 N Y N 360 HIS OXT O N N 361 HIS H H N N 362 HIS H2 H N N 363 HIS HA H N N 364 HIS HB2 H N N 365 HIS HB3 H N N 366 HIS HD1 H N N 367 HIS HD2 H N N 368 HIS HE1 H N N 369 HIS HE2 H N N 370 HIS HXT H N N 371 HOH O O N N 372 HOH H1 H N N 373 HOH H2 H N N 374 ILE N N N N 375 ILE CA C N S 376 ILE C C N N 377 ILE O O N N 378 ILE CB C N S 379 ILE CG1 C N N 380 ILE CG2 C N N 381 ILE CD1 C N N 382 ILE OXT O N N 383 ILE H H N N 384 ILE H2 H N N 385 ILE HA H N N 386 ILE HB H N N 387 ILE HG12 H N N 388 ILE HG13 H N N 389 ILE HG21 H N N 390 ILE HG22 H N N 391 ILE HG23 H N N 392 ILE HD11 H N N 393 ILE HD12 H N N 394 ILE HD13 H N N 395 ILE HXT H N N 396 LEU N N N N 397 LEU CA C N S 398 LEU C C N N 399 LEU O O N N 400 LEU CB C N N 401 LEU CG C N N 402 LEU CD1 C N N 403 LEU CD2 C N N 404 LEU OXT O N N 405 LEU H H N N 406 LEU H2 H N N 407 LEU HA H N N 408 LEU HB2 H N N 409 LEU HB3 H N N 410 LEU HG H N N 411 LEU HD11 H N N 412 LEU HD12 H N N 413 LEU HD13 H N N 414 LEU HD21 H N N 415 LEU HD22 H N N 416 LEU HD23 H N N 417 LEU HXT H N N 418 LYS N N N N 419 LYS CA C N S 420 LYS C C N N 421 LYS O O N N 422 LYS CB C N N 423 LYS CG C N N 424 LYS CD C N N 425 LYS CE C N N 426 LYS NZ N N N 427 LYS OXT O N N 428 LYS H H N N 429 LYS H2 H N N 430 LYS HA H N N 431 LYS HB2 H N N 432 LYS HB3 H N N 433 LYS HG2 H N N 434 LYS HG3 H N N 435 LYS HD2 H N N 436 LYS HD3 H N N 437 LYS HE2 H N N 438 LYS HE3 H N N 439 LYS HZ1 H N N 440 LYS HZ2 H N N 441 LYS HZ3 H N N 442 LYS HXT H N N 443 MET N N N N 444 MET CA C N S 445 MET C C N N 446 MET O O N N 447 MET CB C N N 448 MET CG C N N 449 MET SD S N N 450 MET CE C N N 451 MET OXT O N N 452 MET H H N N 453 MET H2 H N N 454 MET HA H N N 455 MET HB2 H N N 456 MET HB3 H N N 457 MET HG2 H N N 458 MET HG3 H N N 459 MET HE1 H N N 460 MET HE2 H N N 461 MET HE3 H N N 462 MET HXT H N N 463 MN MN MN N N 464 PHE N N N N 465 PHE CA C N S 466 PHE C C N N 467 PHE O O N N 468 PHE CB C N N 469 PHE CG C Y N 470 PHE CD1 C Y N 471 PHE CD2 C Y N 472 PHE CE1 C Y N 473 PHE CE2 C Y N 474 PHE CZ C Y N 475 PHE OXT O N N 476 PHE H H N N 477 PHE H2 H N N 478 PHE HA H N N 479 PHE HB2 H N N 480 PHE HB3 H N N 481 PHE HD1 H N N 482 PHE HD2 H N N 483 PHE HE1 H N N 484 PHE HE2 H N N 485 PHE HZ H N N 486 PHE HXT H N N 487 PRO N N N N 488 PRO CA C N S 489 PRO C C N N 490 PRO O O N N 491 PRO CB C N N 492 PRO CG C N N 493 PRO CD C N N 494 PRO OXT O N N 495 PRO H H N N 496 PRO HA H N N 497 PRO HB2 H N N 498 PRO HB3 H N N 499 PRO HG2 H N N 500 PRO HG3 H N N 501 PRO HD2 H N N 502 PRO HD3 H N N 503 PRO HXT H N N 504 SER N N N N 505 SER CA C N S 506 SER C C N N 507 SER O O N N 508 SER CB C N N 509 SER OG O N N 510 SER OXT O N N 511 SER H H N N 512 SER H2 H N N 513 SER HA H N N 514 SER HB2 H N N 515 SER HB3 H N N 516 SER HG H N N 517 SER HXT H N N 518 THR N N N N 519 THR CA C N S 520 THR C C N N 521 THR O O N N 522 THR CB C N R 523 THR OG1 O N N 524 THR CG2 C N N 525 THR OXT O N N 526 THR H H N N 527 THR H2 H N N 528 THR HA H N N 529 THR HB H N N 530 THR HG1 H N N 531 THR HG21 H N N 532 THR HG22 H N N 533 THR HG23 H N N 534 THR HXT H N N 535 TRP N N N N 536 TRP CA C N S 537 TRP C C N N 538 TRP O O N N 539 TRP CB C N N 540 TRP CG C Y N 541 TRP CD1 C Y N 542 TRP CD2 C Y N 543 TRP NE1 N Y N 544 TRP CE2 C Y N 545 TRP CE3 C Y N 546 TRP CZ2 C Y N 547 TRP CZ3 C Y N 548 TRP CH2 C Y N 549 TRP OXT O N N 550 TRP H H N N 551 TRP H2 H N N 552 TRP HA H N N 553 TRP HB2 H N N 554 TRP HB3 H N N 555 TRP HD1 H N N 556 TRP HE1 H N N 557 TRP HE3 H N N 558 TRP HZ2 H N N 559 TRP HZ3 H N N 560 TRP HH2 H N N 561 TRP HXT H N N 562 TYR N N N N 563 TYR CA C N S 564 TYR C C N N 565 TYR O O N N 566 TYR CB C N N 567 TYR CG C Y N 568 TYR CD1 C Y N 569 TYR CD2 C Y N 570 TYR CE1 C Y N 571 TYR CE2 C Y N 572 TYR CZ C Y N 573 TYR OH O N N 574 TYR OXT O N N 575 TYR H H N N 576 TYR H2 H N N 577 TYR HA H N N 578 TYR HB2 H N N 579 TYR HB3 H N N 580 TYR HD1 H N N 581 TYR HD2 H N N 582 TYR HE1 H N N 583 TYR HE2 H N N 584 TYR HH H N N 585 TYR HXT H N N 586 VAL N N N N 587 VAL CA C N S 588 VAL C C N N 589 VAL O O N N 590 VAL CB C N N 591 VAL CG1 C N N 592 VAL CG2 C N N 593 VAL OXT O N N 594 VAL H H N N 595 VAL H2 H N N 596 VAL HA H N N 597 VAL HB H N N 598 VAL HG11 H N N 599 VAL HG12 H N N 600 VAL HG13 H N N 601 VAL HG21 H N N 602 VAL HG22 H N N 603 VAL HG23 H N N 604 VAL HXT H N N 605 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ADP PB O1B doub N N 1 ADP PB O2B sing N N 2 ADP PB O3B sing N N 3 ADP PB O3A sing N N 4 ADP O2B HOB2 sing N N 5 ADP O3B HOB3 sing N N 6 ADP PA O1A doub N N 7 ADP PA O2A sing N N 8 ADP PA O3A sing N N 9 ADP PA "O5'" sing N N 10 ADP O2A HOA2 sing N N 11 ADP "O5'" "C5'" sing N N 12 ADP "C5'" "C4'" sing N N 13 ADP "C5'" "H5'1" sing N N 14 ADP "C5'" "H5'2" sing N N 15 ADP "C4'" "O4'" sing N N 16 ADP "C4'" "C3'" sing N N 17 ADP "C4'" "H4'" sing N N 18 ADP "O4'" "C1'" sing N N 19 ADP "C3'" "O3'" sing N N 20 ADP "C3'" "C2'" sing N N 21 ADP "C3'" "H3'" sing N N 22 ADP "O3'" "HO3'" sing N N 23 ADP "C2'" "O2'" sing N N 24 ADP "C2'" "C1'" sing N N 25 ADP "C2'" "H2'" sing N N 26 ADP "O2'" "HO2'" sing N N 27 ADP "C1'" N9 sing N N 28 ADP "C1'" "H1'" sing N N 29 ADP N9 C8 sing Y N 30 ADP N9 C4 sing Y N 31 ADP C8 N7 doub Y N 32 ADP C8 H8 sing N N 33 ADP N7 C5 sing Y N 34 ADP C5 C6 sing Y N 35 ADP C5 C4 doub Y N 36 ADP C6 N6 sing N N 37 ADP C6 N1 doub Y N 38 ADP N6 HN61 sing N N 39 ADP N6 HN62 sing N N 40 ADP N1 C2 sing Y N 41 ADP C2 N3 doub Y N 42 ADP C2 H2 sing N N 43 ADP N3 C4 sing Y N 44 ALA N CA sing N N 45 ALA N H sing N N 46 ALA N H2 sing N N 47 ALA CA C sing N N 48 ALA CA CB sing N N 49 ALA CA HA sing N N 50 ALA C O doub N N 51 ALA C OXT sing N N 52 ALA CB HB1 sing N N 53 ALA CB HB2 sing N N 54 ALA CB HB3 sing N N 55 ALA OXT HXT sing N N 56 ARG N CA sing N N 57 ARG N H sing N N 58 ARG N H2 sing N N 59 ARG CA C sing N N 60 ARG CA CB sing N N 61 ARG CA HA sing N N 62 ARG C O doub N N 63 ARG C OXT sing N N 64 ARG CB CG sing N N 65 ARG CB HB2 sing N N 66 ARG CB HB3 sing N N 67 ARG CG CD sing N N 68 ARG CG HG2 sing N N 69 ARG CG HG3 sing N N 70 ARG CD NE sing N N 71 ARG CD HD2 sing N N 72 ARG CD HD3 sing N N 73 ARG NE CZ sing N N 74 ARG NE HE sing N N 75 ARG CZ NH1 sing N N 76 ARG CZ NH2 doub N N 77 ARG NH1 HH11 sing N N 78 ARG NH1 HH12 sing N N 79 ARG NH2 HH21 sing N N 80 ARG NH2 HH22 sing N N 81 ARG OXT HXT sing N N 82 ASN N CA sing N N 83 ASN N H sing N N 84 ASN N H2 sing N N 85 ASN CA C sing N N 86 ASN CA CB sing N N 87 ASN CA HA sing N N 88 ASN C O doub N N 89 ASN C OXT sing N N 90 ASN CB CG sing N N 91 ASN CB HB2 sing N N 92 ASN CB HB3 sing N N 93 ASN CG OD1 doub N N 94 ASN CG ND2 sing N N 95 ASN ND2 HD21 sing N N 96 ASN ND2 HD22 sing N N 97 ASN OXT HXT sing N N 98 ASP N CA sing N N 99 ASP N H sing N N 100 ASP N H2 sing N N 101 ASP CA C sing N N 102 ASP CA CB sing N N 103 ASP CA HA sing N N 104 ASP C O doub N N 105 ASP C OXT sing N N 106 ASP CB CG sing N N 107 ASP CB HB2 sing N N 108 ASP CB HB3 sing N N 109 ASP CG OD1 doub N N 110 ASP CG OD2 sing N N 111 ASP OD2 HD2 sing N N 112 ASP OXT HXT sing N N 113 CSX N CA sing N N 114 CSX N H sing N N 115 CSX N H2 sing N N 116 CSX CA CB sing N N 117 CSX CA C sing N N 118 CSX CA HA sing N N 119 CSX CB SG sing N N 120 CSX CB HB2 sing N N 121 CSX CB HB3 sing N N 122 CSX SG OD doub N N 123 CSX SG HG sing N N 124 CSX C O doub N N 125 CSX C OXT sing N N 126 CSX OXT HXT sing N N 127 CYS N CA sing N N 128 CYS N H sing N N 129 CYS N H2 sing N N 130 CYS CA C sing N N 131 CYS CA CB sing N N 132 CYS CA HA sing N N 133 CYS C O doub N N 134 CYS C OXT sing N N 135 CYS CB SG sing N N 136 CYS CB HB2 sing N N 137 CYS CB HB3 sing N N 138 CYS SG HG sing N N 139 CYS OXT HXT sing N N 140 DA OP3 P sing N N 141 DA OP3 HOP3 sing N N 142 DA P OP1 doub N N 143 DA P OP2 sing N N 144 DA P "O5'" sing N N 145 DA OP2 HOP2 sing N N 146 DA "O5'" "C5'" sing N N 147 DA "C5'" "C4'" sing N N 148 DA "C5'" "H5'" sing N N 149 DA "C5'" "H5''" sing N N 150 DA "C4'" "O4'" sing N N 151 DA "C4'" "C3'" sing N N 152 DA "C4'" "H4'" sing N N 153 DA "O4'" "C1'" sing N N 154 DA "C3'" "O3'" sing N N 155 DA "C3'" "C2'" sing N N 156 DA "C3'" "H3'" sing N N 157 DA "O3'" "HO3'" sing N N 158 DA "C2'" "C1'" sing N N 159 DA "C2'" "H2'" sing N N 160 DA "C2'" "H2''" sing N N 161 DA "C1'" N9 sing N N 162 DA "C1'" "H1'" sing N N 163 DA N9 C8 sing Y N 164 DA N9 C4 sing Y N 165 DA C8 N7 doub Y N 166 DA C8 H8 sing N N 167 DA N7 C5 sing Y N 168 DA C5 C6 sing Y N 169 DA C5 C4 doub Y N 170 DA C6 N6 sing N N 171 DA C6 N1 doub Y N 172 DA N6 H61 sing N N 173 DA N6 H62 sing N N 174 DA N1 C2 sing Y N 175 DA C2 N3 doub Y N 176 DA C2 H2 sing N N 177 DA N3 C4 sing Y N 178 DC OP3 P sing N N 179 DC OP3 HOP3 sing N N 180 DC P OP1 doub N N 181 DC P OP2 sing N N 182 DC P "O5'" sing N N 183 DC OP2 HOP2 sing N N 184 DC "O5'" "C5'" sing N N 185 DC "C5'" "C4'" sing N N 186 DC "C5'" "H5'" sing N N 187 DC "C5'" "H5''" sing N N 188 DC "C4'" "O4'" sing N N 189 DC "C4'" "C3'" sing N N 190 DC "C4'" "H4'" sing N N 191 DC "O4'" "C1'" sing N N 192 DC "C3'" "O3'" sing N N 193 DC "C3'" "C2'" sing N N 194 DC "C3'" "H3'" sing N N 195 DC "O3'" "HO3'" sing N N 196 DC "C2'" "C1'" sing N N 197 DC "C2'" "H2'" sing N N 198 DC "C2'" "H2''" sing N N 199 DC "C1'" N1 sing N N 200 DC "C1'" "H1'" sing N N 201 DC N1 C2 sing N N 202 DC N1 C6 sing N N 203 DC C2 O2 doub N N 204 DC C2 N3 sing N N 205 DC N3 C4 doub N N 206 DC C4 N4 sing N N 207 DC C4 C5 sing N N 208 DC N4 H41 sing N N 209 DC N4 H42 sing N N 210 DC C5 C6 doub N N 211 DC C5 H5 sing N N 212 DC C6 H6 sing N N 213 DG OP3 P sing N N 214 DG OP3 HOP3 sing N N 215 DG P OP1 doub N N 216 DG P OP2 sing N N 217 DG P "O5'" sing N N 218 DG OP2 HOP2 sing N N 219 DG "O5'" "C5'" sing N N 220 DG "C5'" "C4'" sing N N 221 DG "C5'" "H5'" sing N N 222 DG "C5'" "H5''" sing N N 223 DG "C4'" "O4'" sing N N 224 DG "C4'" "C3'" sing N N 225 DG "C4'" "H4'" sing N N 226 DG "O4'" "C1'" sing N N 227 DG "C3'" "O3'" sing N N 228 DG "C3'" "C2'" sing N N 229 DG "C3'" "H3'" sing N N 230 DG "O3'" "HO3'" sing N N 231 DG "C2'" "C1'" sing N N 232 DG "C2'" "H2'" sing N N 233 DG "C2'" "H2''" sing N N 234 DG "C1'" N9 sing N N 235 DG "C1'" "H1'" sing N N 236 DG N9 C8 sing Y N 237 DG N9 C4 sing Y N 238 DG C8 N7 doub Y N 239 DG C8 H8 sing N N 240 DG N7 C5 sing Y N 241 DG C5 C6 sing N N 242 DG C5 C4 doub Y N 243 DG C6 O6 doub N N 244 DG C6 N1 sing N N 245 DG N1 C2 sing N N 246 DG N1 H1 sing N N 247 DG C2 N2 sing N N 248 DG C2 N3 doub N N 249 DG N2 H21 sing N N 250 DG N2 H22 sing N N 251 DG N3 C4 sing N N 252 DT OP3 P sing N N 253 DT OP3 HOP3 sing N N 254 DT P OP1 doub N N 255 DT P OP2 sing N N 256 DT P "O5'" sing N N 257 DT OP2 HOP2 sing N N 258 DT "O5'" "C5'" sing N N 259 DT "C5'" "C4'" sing N N 260 DT "C5'" "H5'" sing N N 261 DT "C5'" "H5''" sing N N 262 DT "C4'" "O4'" sing N N 263 DT "C4'" "C3'" sing N N 264 DT "C4'" "H4'" sing N N 265 DT "O4'" "C1'" sing N N 266 DT "C3'" "O3'" sing N N 267 DT "C3'" "C2'" sing N N 268 DT "C3'" "H3'" sing N N 269 DT "O3'" "HO3'" sing N N 270 DT "C2'" "C1'" sing N N 271 DT "C2'" "H2'" sing N N 272 DT "C2'" "H2''" sing N N 273 DT "C1'" N1 sing N N 274 DT "C1'" "H1'" sing N N 275 DT N1 C2 sing N N 276 DT N1 C6 sing N N 277 DT C2 O2 doub N N 278 DT C2 N3 sing N N 279 DT N3 C4 sing N N 280 DT N3 H3 sing N N 281 DT C4 O4 doub N N 282 DT C4 C5 sing N N 283 DT C5 C7 sing N N 284 DT C5 C6 doub N N 285 DT C7 H71 sing N N 286 DT C7 H72 sing N N 287 DT C7 H73 sing N N 288 DT C6 H6 sing N N 289 GLN N CA sing N N 290 GLN N H sing N N 291 GLN N H2 sing N N 292 GLN CA C sing N N 293 GLN CA CB sing N N 294 GLN CA HA sing N N 295 GLN C O doub N N 296 GLN C OXT sing N N 297 GLN CB CG sing N N 298 GLN CB HB2 sing N N 299 GLN CB HB3 sing N N 300 GLN CG CD sing N N 301 GLN CG HG2 sing N N 302 GLN CG HG3 sing N N 303 GLN CD OE1 doub N N 304 GLN CD NE2 sing N N 305 GLN NE2 HE21 sing N N 306 GLN NE2 HE22 sing N N 307 GLN OXT HXT sing N N 308 GLU N CA sing N N 309 GLU N H sing N N 310 GLU N H2 sing N N 311 GLU CA C sing N N 312 GLU CA CB sing N N 313 GLU CA HA sing N N 314 GLU C O doub N N 315 GLU C OXT sing N N 316 GLU CB CG sing N N 317 GLU CB HB2 sing N N 318 GLU CB HB3 sing N N 319 GLU CG CD sing N N 320 GLU CG HG2 sing N N 321 GLU CG HG3 sing N N 322 GLU CD OE1 doub N N 323 GLU CD OE2 sing N N 324 GLU OE2 HE2 sing N N 325 GLU OXT HXT sing N N 326 GLY N CA sing N N 327 GLY N H sing N N 328 GLY N H2 sing N N 329 GLY CA C sing N N 330 GLY CA HA2 sing N N 331 GLY CA HA3 sing N N 332 GLY C O doub N N 333 GLY C OXT sing N N 334 GLY OXT HXT sing N N 335 GOL C1 O1 sing N N 336 GOL C1 C2 sing N N 337 GOL C1 H11 sing N N 338 GOL C1 H12 sing N N 339 GOL O1 HO1 sing N N 340 GOL C2 O2 sing N N 341 GOL C2 C3 sing N N 342 GOL C2 H2 sing N N 343 GOL O2 HO2 sing N N 344 GOL C3 O3 sing N N 345 GOL C3 H31 sing N N 346 GOL C3 H32 sing N N 347 GOL O3 HO3 sing N N 348 HIS N CA sing N N 349 HIS N H sing N N 350 HIS N H2 sing N N 351 HIS CA C sing N N 352 HIS CA CB sing N N 353 HIS CA HA sing N N 354 HIS C O doub N N 355 HIS C OXT sing N N 356 HIS CB CG sing N N 357 HIS CB HB2 sing N N 358 HIS CB HB3 sing N N 359 HIS CG ND1 sing Y N 360 HIS CG CD2 doub Y N 361 HIS ND1 CE1 doub Y N 362 HIS ND1 HD1 sing N N 363 HIS CD2 NE2 sing Y N 364 HIS CD2 HD2 sing N N 365 HIS CE1 NE2 sing Y N 366 HIS CE1 HE1 sing N N 367 HIS NE2 HE2 sing N N 368 HIS OXT HXT sing N N 369 HOH O H1 sing N N 370 HOH O H2 sing N N 371 ILE N CA sing N N 372 ILE N H sing N N 373 ILE N H2 sing N N 374 ILE CA C sing N N 375 ILE CA CB sing N N 376 ILE CA HA sing N N 377 ILE C O doub N N 378 ILE C OXT sing N N 379 ILE CB CG1 sing N N 380 ILE CB CG2 sing N N 381 ILE CB HB sing N N 382 ILE CG1 CD1 sing N N 383 ILE CG1 HG12 sing N N 384 ILE CG1 HG13 sing N N 385 ILE CG2 HG21 sing N N 386 ILE CG2 HG22 sing N N 387 ILE CG2 HG23 sing N N 388 ILE CD1 HD11 sing N N 389 ILE CD1 HD12 sing N N 390 ILE CD1 HD13 sing N N 391 ILE OXT HXT sing N N 392 LEU N CA sing N N 393 LEU N H sing N N 394 LEU N H2 sing N N 395 LEU CA C sing N N 396 LEU CA CB sing N N 397 LEU CA HA sing N N 398 LEU C O doub N N 399 LEU C OXT sing N N 400 LEU CB CG sing N N 401 LEU CB HB2 sing N N 402 LEU CB HB3 sing N N 403 LEU CG CD1 sing N N 404 LEU CG CD2 sing N N 405 LEU CG HG sing N N 406 LEU CD1 HD11 sing N N 407 LEU CD1 HD12 sing N N 408 LEU CD1 HD13 sing N N 409 LEU CD2 HD21 sing N N 410 LEU CD2 HD22 sing N N 411 LEU CD2 HD23 sing N N 412 LEU OXT HXT sing N N 413 LYS N CA sing N N 414 LYS N H sing N N 415 LYS N H2 sing N N 416 LYS CA C sing N N 417 LYS CA CB sing N N 418 LYS CA HA sing N N 419 LYS C O doub N N 420 LYS C OXT sing N N 421 LYS CB CG sing N N 422 LYS CB HB2 sing N N 423 LYS CB HB3 sing N N 424 LYS CG CD sing N N 425 LYS CG HG2 sing N N 426 LYS CG HG3 sing N N 427 LYS CD CE sing N N 428 LYS CD HD2 sing N N 429 LYS CD HD3 sing N N 430 LYS CE NZ sing N N 431 LYS CE HE2 sing N N 432 LYS CE HE3 sing N N 433 LYS NZ HZ1 sing N N 434 LYS NZ HZ2 sing N N 435 LYS NZ HZ3 sing N N 436 LYS OXT HXT sing N N 437 MET N CA sing N N 438 MET N H sing N N 439 MET N H2 sing N N 440 MET CA C sing N N 441 MET CA CB sing N N 442 MET CA HA sing N N 443 MET C O doub N N 444 MET C OXT sing N N 445 MET CB CG sing N N 446 MET CB HB2 sing N N 447 MET CB HB3 sing N N 448 MET CG SD sing N N 449 MET CG HG2 sing N N 450 MET CG HG3 sing N N 451 MET SD CE sing N N 452 MET CE HE1 sing N N 453 MET CE HE2 sing N N 454 MET CE HE3 sing N N 455 MET OXT HXT sing N N 456 PHE N CA sing N N 457 PHE N H sing N N 458 PHE N H2 sing N N 459 PHE CA C sing N N 460 PHE CA CB sing N N 461 PHE CA HA sing N N 462 PHE C O doub N N 463 PHE C OXT sing N N 464 PHE CB CG sing N N 465 PHE CB HB2 sing N N 466 PHE CB HB3 sing N N 467 PHE CG CD1 doub Y N 468 PHE CG CD2 sing Y N 469 PHE CD1 CE1 sing Y N 470 PHE CD1 HD1 sing N N 471 PHE CD2 CE2 doub Y N 472 PHE CD2 HD2 sing N N 473 PHE CE1 CZ doub Y N 474 PHE CE1 HE1 sing N N 475 PHE CE2 CZ sing Y N 476 PHE CE2 HE2 sing N N 477 PHE CZ HZ sing N N 478 PHE OXT HXT sing N N 479 PRO N CA sing N N 480 PRO N CD sing N N 481 PRO N H sing N N 482 PRO CA C sing N N 483 PRO CA CB sing N N 484 PRO CA HA sing N N 485 PRO C O doub N N 486 PRO C OXT sing N N 487 PRO CB CG sing N N 488 PRO CB HB2 sing N N 489 PRO CB HB3 sing N N 490 PRO CG CD sing N N 491 PRO CG HG2 sing N N 492 PRO CG HG3 sing N N 493 PRO CD HD2 sing N N 494 PRO CD HD3 sing N N 495 PRO OXT HXT sing N N 496 SER N CA sing N N 497 SER N H sing N N 498 SER N H2 sing N N 499 SER CA C sing N N 500 SER CA CB sing N N 501 SER CA HA sing N N 502 SER C O doub N N 503 SER C OXT sing N N 504 SER CB OG sing N N 505 SER CB HB2 sing N N 506 SER CB HB3 sing N N 507 SER OG HG sing N N 508 SER OXT HXT sing N N 509 THR N CA sing N N 510 THR N H sing N N 511 THR N H2 sing N N 512 THR CA C sing N N 513 THR CA CB sing N N 514 THR CA HA sing N N 515 THR C O doub N N 516 THR C OXT sing N N 517 THR CB OG1 sing N N 518 THR CB CG2 sing N N 519 THR CB HB sing N N 520 THR OG1 HG1 sing N N 521 THR CG2 HG21 sing N N 522 THR CG2 HG22 sing N N 523 THR CG2 HG23 sing N N 524 THR OXT HXT sing N N 525 TRP N CA sing N N 526 TRP N H sing N N 527 TRP N H2 sing N N 528 TRP CA C sing N N 529 TRP CA CB sing N N 530 TRP CA HA sing N N 531 TRP C O doub N N 532 TRP C OXT sing N N 533 TRP CB CG sing N N 534 TRP CB HB2 sing N N 535 TRP CB HB3 sing N N 536 TRP CG CD1 doub Y N 537 TRP CG CD2 sing Y N 538 TRP CD1 NE1 sing Y N 539 TRP CD1 HD1 sing N N 540 TRP CD2 CE2 doub Y N 541 TRP CD2 CE3 sing Y N 542 TRP NE1 CE2 sing Y N 543 TRP NE1 HE1 sing N N 544 TRP CE2 CZ2 sing Y N 545 TRP CE3 CZ3 doub Y N 546 TRP CE3 HE3 sing N N 547 TRP CZ2 CH2 doub Y N 548 TRP CZ2 HZ2 sing N N 549 TRP CZ3 CH2 sing Y N 550 TRP CZ3 HZ3 sing N N 551 TRP CH2 HH2 sing N N 552 TRP OXT HXT sing N N 553 TYR N CA sing N N 554 TYR N H sing N N 555 TYR N H2 sing N N 556 TYR CA C sing N N 557 TYR CA CB sing N N 558 TYR CA HA sing N N 559 TYR C O doub N N 560 TYR C OXT sing N N 561 TYR CB CG sing N N 562 TYR CB HB2 sing N N 563 TYR CB HB3 sing N N 564 TYR CG CD1 doub Y N 565 TYR CG CD2 sing Y N 566 TYR CD1 CE1 sing Y N 567 TYR CD1 HD1 sing N N 568 TYR CD2 CE2 doub Y N 569 TYR CD2 HD2 sing N N 570 TYR CE1 CZ doub Y N 571 TYR CE1 HE1 sing N N 572 TYR CE2 CZ sing Y N 573 TYR CE2 HE2 sing N N 574 TYR CZ OH sing N N 575 TYR OH HH sing N N 576 TYR OXT HXT sing N N 577 VAL N CA sing N N 578 VAL N H sing N N 579 VAL N H2 sing N N 580 VAL CA C sing N N 581 VAL CA CB sing N N 582 VAL CA HA sing N N 583 VAL C O doub N N 584 VAL C OXT sing N N 585 VAL CB CG1 sing N N 586 VAL CB CG2 sing N N 587 VAL CB HB sing N N 588 VAL CG1 HG11 sing N N 589 VAL CG1 HG12 sing N N 590 VAL CG1 HG13 sing N N 591 VAL CG2 HG21 sing N N 592 VAL CG2 HG22 sing N N 593 VAL CG2 HG23 sing N N 594 VAL OXT HXT sing N N 595 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 3ZVN 'double helix' 3ZVN 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 B DG 1 1_555 F DC 3 1_555 0.039 0.006 -0.576 -20.565 -1.476 2.465 1 E_DG1:DC3_I E 1 ? I 3 ? 19 1 1 B DT 2 1_555 F DT 2 1_555 2.702 -1.855 -0.023 -1.660 -3.529 10.796 2 E_DT2:DT2_I E 2 ? I 2 ? 16 1 1 B DC 3 1_555 F DG 1 1_555 0.084 -0.148 -0.619 10.248 9.024 -1.071 3 E_DC3:DG1_I E 3 ? I 1 ? 19 1 1 E DG 1 1_555 C DC 5 1_555 -0.165 -0.548 -0.125 -4.665 -4.860 -3.436 4 H_DG1:DC5_F H 1 ? F 5 ? 19 1 1 E DT 2 1_555 C DA 4 1_555 -0.146 -0.275 0.050 -5.058 -8.454 -0.659 5 H_DT2:DA4_F H 2 ? F 4 ? 20 1 1 E DC 3 1_555 C DC 3 1_555 -1.620 -1.746 0.304 2.808 -23.871 16.630 6 H_DC3:DC3_F H 3 ? F 3 ? ? ? 1 E DA 4 1_555 C DT 2 1_555 -0.116 -0.017 -0.047 3.878 -10.054 4.157 7 H_DA4:DT2_F H 4 ? F 2 ? 20 1 1 E DC 5 1_555 C DG 1 1_555 0.313 -0.375 0.010 2.763 -8.098 1.003 8 H_DC5:DG1_F H 5 ? F 1 ? 19 1 1 D DG 1 1_555 F DC 5 1_555 0.257 -0.228 0.152 1.041 -6.507 3.694 9 G_DG1:DC5_I G 1 ? I 5 ? 19 1 1 D DT 2 1_555 F DA 4 1_555 0.031 -0.604 0.177 3.951 -10.341 4.993 10 G_DT2:DA4_I G 2 ? I 4 ? 20 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 B DG 1 1_555 F DC 3 1_555 B DT 2 1_555 F DT 2 1_555 0.320 0.208 2.984 -5.844 8.022 36.475 -0.624 -1.183 2.881 12.534 9.131 37.757 1 EE_DG1DT2:DT2DC3_II E 1 ? I 3 ? E 2 ? I 2 ? 1 B DT 2 1_555 F DT 2 1_555 B DC 3 1_555 F DG 1 1_555 0.080 -1.545 3.225 7.376 4.354 16.547 -6.965 3.464 2.541 13.974 -23.676 18.619 2 EE_DT2DC3:DG1DT2_II E 2 ? I 2 ? E 3 ? I 1 ? 1 B DC 3 1_555 F DG 1 1_555 E DG 1 1_555 C DC 5 1_555 -0.275 0.778 3.585 -0.951 -3.676 -92.130 -0.463 -0.211 3.605 2.551 -0.660 -92.191 3 EH_DC3DG1:DC5DG1_FI E 3 ? I 1 ? H 1 ? F 5 ? 1 E DG 1 1_555 C DC 5 1_555 E DT 2 1_555 C DA 4 1_555 -0.294 -0.532 3.351 -0.077 -0.048 30.243 -1.009 0.547 3.353 -0.091 0.147 30.243 4 HH_DG1DT2:DA4DC5_FF H 1 ? F 5 ? H 2 ? F 4 ? 1 E DT 2 1_555 C DA 4 1_555 E DC 3 1_555 C DC 3 1_555 0.363 0.620 3.059 -2.286 1.492 33.054 0.851 -0.995 3.052 2.617 4.010 33.164 5 HH_DT2DC3:DC3DA4_FF H 2 ? F 4 ? H 3 ? F 3 ? 1 E DC 3 1_555 C DC 3 1_555 E DA 4 1_555 C DT 2 1_555 -0.220 1.003 3.367 1.332 2.536 44.397 1.083 0.418 3.409 3.352 -1.760 44.485 6 HH_DC3DA4:DT2DC3_FF H 3 ? F 3 ? H 4 ? F 2 ? 1 E DA 4 1_555 C DT 2 1_555 E DC 5 1_555 C DG 1 1_555 0.676 -0.408 3.295 -0.460 -1.681 33.042 -0.431 -1.265 3.302 -2.953 0.807 33.087 7 HH_DA4DC5:DG1DT2_FF H 4 ? F 2 ? H 5 ? F 1 ? 1 D DG 1 1_555 F DC 5 1_555 D DT 2 1_555 F DA 4 1_555 0.114 0.050 3.226 0.588 -4.637 33.151 0.841 -0.102 3.191 -8.077 -1.024 33.470 8 GG_DG1DT2:DA4DC5_II G 1 ? I 5 ? G 2 ? I 4 ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 'MANGANESE (II) ION' MN 4 GLYCEROL GOL 5 "ADENOSINE-5'-DIPHOSPHATE" ADP 6 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1YJ5 _pdbx_initial_refinement_model.details 'PDB ENTRY 1YJ5' #