HEADER SUGAR BINDING PROTEIN 10-AUG-11 3ZXE TITLE CRYSTAL STRUCTURE OF HUMAN GALECTIN-7 IN COMPLEX WITH A GALACTOSE- TITLE 2 BENZYLPHOSPHATE INHIBITOR COMPND MOL_ID: 1; COMPND 2 MOLECULE: GALECTIN-7; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: RESIDUES 4-136; COMPND 5 SYNONYM: GAL-7, HKL-14, PI7, P53-INDUCED GENE 1 PROTEIN; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3) KEYWDS SUGAR BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR G.MASUYER,C.T.OBERG,H.LEFFLER,U.J.NILSSON,K.R.ACHARYA REVDAT 3 20-DEC-23 3ZXE 1 REMARK REVDAT 2 25-JAN-12 3ZXE 1 JRNL REVDAT 1 30-NOV-11 3ZXE 0 JRNL AUTH G.MASUYER,T.JABEEN,C.T.OBERG,H.LEFFLER,U.J.NILSSON, JRNL AUTH 2 K.R.ACHARYA JRNL TITL INHIBITION MECHANISM OF HUMAN GALECTIN-7 BY A NOVEL JRNL TITL 2 GALACTOSE-BENZYLPHOSPHATE INHIBITOR. JRNL REF FEBS J. V. 279 193 2012 JRNL REFN ISSN 1742-464X JRNL PMID 22059385 JRNL DOI 10.1111/J.1742-4658.2011.08414.X REMARK 2 REMARK 2 RESOLUTION. 1.67 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0109 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.67 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 69.34 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 93.2 REMARK 3 NUMBER OF REFLECTIONS : 28199 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.206 REMARK 3 R VALUE (WORKING SET) : 0.205 REMARK 3 FREE R VALUE : 0.236 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 3.200 REMARK 3 FREE R VALUE TEST SET COUNT : 931 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.67 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.72 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1880 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 85.92 REMARK 3 BIN R VALUE (WORKING SET) : 0.2500 REMARK 3 BIN FREE R VALUE SET COUNT : 55 REMARK 3 BIN FREE R VALUE : 0.2730 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2081 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 66 REMARK 3 SOLVENT ATOMS : 364 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 15.10 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 17.61 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.87000 REMARK 3 B22 (A**2) : -0.64000 REMARK 3 B33 (A**2) : -1.22000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.136 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.124 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.074 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.125 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.937 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.913 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2310 ; 0.006 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3149 ; 1.085 ; 1.982 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 287 ; 5.903 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 117 ;29.517 ;22.308 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 355 ;11.860 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 29 ;17.806 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 326 ; 0.068 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1861 ; 0.005 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1389 ; 0.443 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2254 ; 0.841 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 921 ; 1.224 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 895 ; 2.117 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. REMARK 4 REMARK 4 3ZXE COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 10-AUG-11. REMARK 100 THE DEPOSITION ID IS D_1290049304. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 19-APR-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I03 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.976 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 31402 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.670 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 92.9 REMARK 200 DATA REDUNDANCY : 4.300 REMARK 200 R MERGE (I) : 0.07000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 20.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.67 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.73 REMARK 200 COMPLETENESS FOR SHELL (%) : 84.4 REMARK 200 DATA REDUNDANCY IN SHELL : 4.50 REMARK 200 R MERGE FOR SHELL (I) : 0.13000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 9.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 1BKZ REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.20 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M BISTRISPROPANE, 20% PEG3350, PH REMARK 280 8.5 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 17.64350 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 69.32300 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 26.72950 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 69.32300 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 17.64350 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 26.72950 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 VAL A 3 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NE2 GLN A 84 O HOH A 2145 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 2120 O HOH A 2145 3554 1.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 79 45.76 -83.98 REMARK 500 PRO B 4 78.12 -21.59 REMARK 500 SER B 30 -60.99 -103.50 REMARK 500 PRO B 79 39.91 -81.57 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A2015 DISTANCE = 6.16 ANGSTROMS REMARK 525 HOH A2028 DISTANCE = 6.58 ANGSTROMS REMARK 525 HOH B2010 DISTANCE = 6.13 ANGSTROMS REMARK 525 HOH B2011 DISTANCE = 5.84 ANGSTROMS REMARK 525 HOH B2014 DISTANCE = 6.53 ANGSTROMS REMARK 525 HOH B2015 DISTANCE = 6.44 ANGSTROMS REMARK 525 HOH B2016 DISTANCE = 7.79 ANGSTROMS REMARK 525 HOH B2026 DISTANCE = 6.20 ANGSTROMS REMARK 525 HOH B2037 DISTANCE = 5.94 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PGZ A 1 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PGZ B 1 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4GAL RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF HUMAN GALECTIN-7 IN COMPLEX WITH LACTOSE REMARK 900 RELATED ID: 5GAL RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF HUMAN GALECTIN-7 IN COMPLEX WITH N- REMARK 900 ACETYLLACTOSAMINE REMARK 900 RELATED ID: 1BKZ RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF HUMAN GALECTIN-7 REMARK 900 RELATED ID: 2GAL RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF HUMAN GALECTIN-7 IN COMPLEX WITH GALACTOSE REMARK 900 RELATED ID: 3GAL RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF HUMAN GALECTIN-7 IN COMPLEX WITH GALACTOSAMINE REMARK 900 RELATED ID: 3ZXF RELATED DB: PDB REMARK 900 HIGH RESOLUTION STRUCTURE OF HUMAN GALECTIN-7 DBREF 3ZXE A 3 135 UNP P47929 LEG7_HUMAN 4 136 DBREF 3ZXE B 3 135 UNP P47929 LEG7_HUMAN 4 136 SEQRES 1 A 133 VAL PRO HIS LYS SER SER LEU PRO GLU GLY ILE ARG PRO SEQRES 2 A 133 GLY THR VAL LEU ARG ILE ARG GLY LEU VAL PRO PRO ASN SEQRES 3 A 133 ALA SER ARG PHE HIS VAL ASN LEU LEU CYS GLY GLU GLU SEQRES 4 A 133 GLN GLY SER ASP ALA ALA LEU HIS PHE ASN PRO ARG LEU SEQRES 5 A 133 ASP THR SER GLU VAL VAL PHE ASN SER LYS GLU GLN GLY SEQRES 6 A 133 SER TRP GLY ARG GLU GLU ARG GLY PRO GLY VAL PRO PHE SEQRES 7 A 133 GLN ARG GLY GLN PRO PHE GLU VAL LEU ILE ILE ALA SER SEQRES 8 A 133 ASP ASP GLY PHE LYS ALA VAL VAL GLY ASP ALA GLN TYR SEQRES 9 A 133 HIS HIS PHE ARG HIS ARG LEU PRO LEU ALA ARG VAL ARG SEQRES 10 A 133 LEU VAL GLU VAL GLY GLY ASP VAL GLN LEU ASP SER VAL SEQRES 11 A 133 ARG ILE PHE SEQRES 1 B 133 VAL PRO HIS LYS SER SER LEU PRO GLU GLY ILE ARG PRO SEQRES 2 B 133 GLY THR VAL LEU ARG ILE ARG GLY LEU VAL PRO PRO ASN SEQRES 3 B 133 ALA SER ARG PHE HIS VAL ASN LEU LEU CYS GLY GLU GLU SEQRES 4 B 133 GLN GLY SER ASP ALA ALA LEU HIS PHE ASN PRO ARG LEU SEQRES 5 B 133 ASP THR SER GLU VAL VAL PHE ASN SER LYS GLU GLN GLY SEQRES 6 B 133 SER TRP GLY ARG GLU GLU ARG GLY PRO GLY VAL PRO PHE SEQRES 7 B 133 GLN ARG GLY GLN PRO PHE GLU VAL LEU ILE ILE ALA SER SEQRES 8 B 133 ASP ASP GLY PHE LYS ALA VAL VAL GLY ASP ALA GLN TYR SEQRES 9 B 133 HIS HIS PHE ARG HIS ARG LEU PRO LEU ALA ARG VAL ARG SEQRES 10 B 133 LEU VAL GLU VAL GLY GLY ASP VAL GLN LEU ASP SER VAL SEQRES 11 B 133 ARG ILE PHE HET PGZ A 1 33 HET PGZ B 1 33 HETNAM PGZ METHYL 2-O-[(S)-(BENZYLOXY)(HYDROXY)PHOSPHORYL]-3- HETNAM 2 PGZ DEOXY-3-{[(4-METHYLPHENYL)CARBONYL]AMINO}-1-THIO-BETA- HETNAM 3 PGZ D-GALACTOPYRANOSIDE FORMUL 3 PGZ 2(C22 H28 N O8 P S) FORMUL 5 HOH *364(H2 O) HELIX 1 1 PRO A 114 VAL A 118 5 5 HELIX 2 2 PRO B 114 VAL B 118 5 5 SHEET 1 AA 6 HIS A 5 SER A 8 0 SHEET 2 AA 6 LEU A 120 GLY A 125 -1 O VAL A 121 N SER A 7 SHEET 3 AA 6 PHE A 32 LEU A 37 -1 O HIS A 33 N GLY A 124 SHEET 4 AA 6 ALA A 46 ARG A 53 -1 N ALA A 47 O LEU A 36 SHEET 5 AA 6 GLU A 58 GLU A 65 -1 O GLU A 58 N ARG A 53 SHEET 6 AA 6 SER A 68 TRP A 69 -1 O SER A 68 N GLU A 65 SHEET 1 AB 6 HIS A 5 SER A 8 0 SHEET 2 AB 6 LEU A 120 GLY A 125 -1 O VAL A 121 N SER A 7 SHEET 3 AB 6 PHE A 32 LEU A 37 -1 O HIS A 33 N GLY A 124 SHEET 4 AB 6 ALA A 46 ARG A 53 -1 N ALA A 47 O LEU A 36 SHEET 5 AB 6 GLU A 58 GLU A 65 -1 O GLU A 58 N ARG A 53 SHEET 6 AB 6 GLU A 73 ARG A 74 -1 O GLU A 73 N PHE A 61 SHEET 1 AC 2 SER A 68 TRP A 69 0 SHEET 2 AC 2 GLU A 58 GLU A 65 -1 O GLU A 65 N SER A 68 SHEET 1 AD 5 ALA A 104 ARG A 110 0 SHEET 2 AD 5 GLY A 96 VAL A 101 -1 O PHE A 97 N PHE A 109 SHEET 3 AD 5 PRO A 85 ALA A 92 -1 O LEU A 89 N VAL A 100 SHEET 4 AD 5 VAL A 18 LEU A 24 -1 O LEU A 19 N ILE A 90 SHEET 5 AD 5 GLN A 128 PHE A 135 -1 O GLN A 128 N LEU A 24 SHEET 1 BA 6 HIS B 5 SER B 8 0 SHEET 2 BA 6 LEU B 120 GLY B 125 -1 O VAL B 121 N SER B 7 SHEET 3 BA 6 PHE B 32 LEU B 37 -1 O HIS B 33 N GLY B 124 SHEET 4 BA 6 ALA B 46 ARG B 53 -1 N ALA B 47 O LEU B 36 SHEET 5 BA 6 GLU B 58 GLU B 65 -1 O GLU B 58 N ARG B 53 SHEET 6 BA 6 SER B 68 TRP B 69 -1 O SER B 68 N GLU B 65 SHEET 1 BB 6 HIS B 5 SER B 8 0 SHEET 2 BB 6 LEU B 120 GLY B 125 -1 O VAL B 121 N SER B 7 SHEET 3 BB 6 PHE B 32 LEU B 37 -1 O HIS B 33 N GLY B 124 SHEET 4 BB 6 ALA B 46 ARG B 53 -1 N ALA B 47 O LEU B 36 SHEET 5 BB 6 GLU B 58 GLU B 65 -1 O GLU B 58 N ARG B 53 SHEET 6 BB 6 GLU B 73 ARG B 74 -1 O GLU B 73 N PHE B 61 SHEET 1 BC 2 SER B 68 TRP B 69 0 SHEET 2 BC 2 GLU B 58 GLU B 65 -1 O GLU B 65 N SER B 68 SHEET 1 BD 5 ALA B 104 ARG B 110 0 SHEET 2 BD 5 GLY B 96 VAL B 101 -1 O PHE B 97 N PHE B 109 SHEET 3 BD 5 PRO B 85 ALA B 92 -1 O LEU B 89 N VAL B 100 SHEET 4 BD 5 THR B 17 LEU B 24 -1 O THR B 17 N ALA B 92 SHEET 5 BD 5 GLN B 128 PHE B 135 -1 O GLN B 128 N LEU B 24 SITE 1 AC1 13 HIS A 33 HIS A 49 ASN A 51 ARG A 53 SITE 2 AC1 13 ASN A 62 TRP A 69 GLU A 72 PRO A 85 SITE 3 AC1 13 GLU A 87 ASP A 130 HOH A2001 HOH A2003 SITE 4 AC1 13 HOH A2004 SITE 1 AC2 18 ARG B 31 HIS B 49 ASN B 51 ARG B 53 SITE 2 AC2 18 ASN B 62 TRP B 69 ARG B 71 GLU B 72 SITE 3 AC2 18 GLU B 73 ARG B 74 HIS B 107 HOH B2001 SITE 4 AC2 18 HOH B2002 HOH B2003 HOH B2004 HOH B2006 SITE 5 AC2 18 HOH B2007 HOH B2107 CRYST1 35.287 53.459 138.646 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.028339 0.000000 0.000000 0.00000 SCALE2 0.000000 0.018706 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007213 0.00000