HEADER HYDROLASE 16-AUG-11 3ZXY TITLE STRUCTURE OF S218A MUTANT OF THE PROTEASE DOMAIN OF PATA COMPND MOL_ID: 1; COMPND 2 MOLECULE: SUBTILISIN-LIKE PROTEIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: RESIDUES 10-289; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PROCHLORON DIDEMNI; SOURCE 3 ORGANISM_TAXID: 1216; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PHISTEV KEYWDS HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR J.KOEHNKE,D.ZOLLMAN,J.VENDOME,A.RAAB,W.E.HOUSSEN,M.C.SMITH,M.JASPARS, AUTHOR 2 J.H.NAISMITH REVDAT 5 20-DEC-23 3ZXY 1 REMARK REVDAT 4 06-NOV-13 3ZXY 1 AUTHOR REVDAT 3 16-JAN-13 3ZXY 1 JRNL REVDAT 2 05-DEC-12 3ZXY 1 JRNL REVDAT 1 29-AUG-12 3ZXY 0 JRNL AUTH W.E.HOUSSEN,J.KOEHNKE,D.ZOLLMAN,J.VENDOME,A.RAAB,M.C.SMITH, JRNL AUTH 2 J.H.NAISMITH,M.JASPARS JRNL TITL THE DISCOVERY OF NEW CYANOBACTINS FROM CYANOTHECE PCC 7425 JRNL TITL 2 DEFINES A NEW SIGNATURE FOR PROCESSING OF PATELLAMIDES. JRNL REF CHEMBIOCHEM V. 13 2683 2012 JRNL REFN ISSN 1439-4227 JRNL PMID 23169461 JRNL DOI 10.1002/CBIC.201200661 REMARK 2 REMARK 2 RESOLUTION. 1.58 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.6.0119 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.58 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 92.36 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 48227 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.156 REMARK 3 R VALUE (WORKING SET) : 0.156 REMARK 3 FREE R VALUE : 0.174 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 2580 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.58 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.62 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3411 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.1910 REMARK 3 BIN FREE R VALUE SET COUNT : 186 REMARK 3 BIN FREE R VALUE : 0.2100 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2005 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 303 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 17.53 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.061 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.062 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.037 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.077 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.968 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.962 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2070 ; 0.008 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 1385 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2823 ; 1.387 ; 1.975 REMARK 3 BOND ANGLES OTHERS (DEGREES): 3382 ; 0.889 ; 3.002 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 281 ; 5.229 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 84 ;35.138 ;23.690 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 321 ;11.673 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 17 ;16.849 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 327 ; 0.078 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2369 ; 0.006 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 400 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 8 A 21 REMARK 3 ORIGIN FOR THE GROUP (A): -12.0000 45.3640 32.9560 REMARK 3 T TENSOR REMARK 3 T11: 0.1246 T22: 0.1470 REMARK 3 T33: 0.0858 T12: -0.0270 REMARK 3 T13: -0.0147 T23: 0.0801 REMARK 3 L TENSOR REMARK 3 L11: 3.4760 L22: 19.8531 REMARK 3 L33: 0.1990 L12: -2.9173 REMARK 3 L13: 0.0382 L23: -1.6769 REMARK 3 S TENSOR REMARK 3 S11: 0.0096 S12: 0.1959 S13: 0.1772 REMARK 3 S21: -0.2665 S22: 0.0853 S23: 0.4077 REMARK 3 S31: -0.0038 S32: -0.0806 S33: -0.0949 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 22 A 96 REMARK 3 ORIGIN FOR THE GROUP (A): -19.9770 34.5120 42.6220 REMARK 3 T TENSOR REMARK 3 T11: 0.0609 T22: 0.0947 REMARK 3 T33: 0.0657 T12: -0.0655 REMARK 3 T13: -0.0426 T23: 0.0384 REMARK 3 L TENSOR REMARK 3 L11: 1.3439 L22: 2.7072 REMARK 3 L33: 2.1677 L12: 0.3238 REMARK 3 L13: -0.4701 L23: -1.2056 REMARK 3 S TENSOR REMARK 3 S11: -0.0632 S12: 0.1242 S13: 0.0009 REMARK 3 S21: -0.2685 S22: 0.1656 S23: 0.2054 REMARK 3 S31: 0.2370 S32: -0.2229 S33: -0.1025 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 97 A 196 REMARK 3 ORIGIN FOR THE GROUP (A): -2.0150 33.1420 47.9920 REMARK 3 T TENSOR REMARK 3 T11: 0.0475 T22: 0.0208 REMARK 3 T33: 0.0251 T12: 0.0004 REMARK 3 T13: 0.0090 T23: 0.0062 REMARK 3 L TENSOR REMARK 3 L11: 1.2386 L22: 1.3369 REMARK 3 L33: 2.8172 L12: 0.2682 REMARK 3 L13: 0.1251 L23: -0.0767 REMARK 3 S TENSOR REMARK 3 S11: -0.0083 S12: 0.0032 S13: -0.0962 REMARK 3 S21: -0.0955 S22: 0.0523 S23: -0.0544 REMARK 3 S31: 0.2572 S32: 0.1065 S33: -0.0440 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 197 A 289 REMARK 3 ORIGIN FOR THE GROUP (A): -4.4200 46.9840 43.5490 REMARK 3 T TENSOR REMARK 3 T11: 0.0306 T22: 0.0141 REMARK 3 T33: 0.0180 T12: -0.0106 REMARK 3 T13: 0.0018 T23: 0.0047 REMARK 3 L TENSOR REMARK 3 L11: 1.5831 L22: 1.5348 REMARK 3 L33: 1.5834 L12: 0.4888 REMARK 3 L13: -0.4842 L23: -0.8238 REMARK 3 S TENSOR REMARK 3 S11: 0.0184 S12: -0.0549 S13: 0.1128 REMARK 3 S21: -0.0122 S22: 0.0312 S23: 0.0442 REMARK 3 S31: -0.0554 S32: 0.0255 S33: -0.0496 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. U VALUES WITH TLS ADDED REMARK 4 REMARK 4 3ZXY COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 16-AUG-11. REMARK 100 THE DEPOSITION ID IS D_1290049367. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I03 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9793 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 48227 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.580 REMARK 200 RESOLUTION RANGE LOW (A) : 92.360 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 7.300 REMARK 200 R MERGE (I) : 0.08000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.58 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.62 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 7.30 REMARK 200 R MERGE FOR SHELL (I) : 0.65000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 1DBI REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 58.92 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.99 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 2 3 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 Z,X,Y REMARK 290 6555 Z,-X,-Y REMARK 290 7555 -Z,-X,Y REMARK 290 8555 -Z,X,-Y REMARK 290 9555 Y,Z,X REMARK 290 10555 -Y,Z,-X REMARK 290 11555 Y,-Z,-X REMARK 290 12555 -Y,-Z,X REMARK 290 13555 X+1/2,Y+1/2,Z+1/2 REMARK 290 14555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 15555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 16555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 17555 Z+1/2,X+1/2,Y+1/2 REMARK 290 18555 Z+1/2,-X+1/2,-Y+1/2 REMARK 290 19555 -Z+1/2,-X+1/2,Y+1/2 REMARK 290 20555 -Z+1/2,X+1/2,-Y+1/2 REMARK 290 21555 Y+1/2,Z+1/2,X+1/2 REMARK 290 22555 -Y+1/2,Z+1/2,-X+1/2 REMARK 290 23555 Y+1/2,-Z+1/2,-X+1/2 REMARK 290 24555 -Y+1/2,-Z+1/2,X+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 6 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 6 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 7 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 9 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 9 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 9 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 10 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 10 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 12 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 12 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 12 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 13 1.000000 0.000000 0.000000 65.30500 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 65.30500 REMARK 290 SMTRY3 13 0.000000 0.000000 1.000000 65.30500 REMARK 290 SMTRY1 14 -1.000000 0.000000 0.000000 65.30500 REMARK 290 SMTRY2 14 0.000000 -1.000000 0.000000 65.30500 REMARK 290 SMTRY3 14 0.000000 0.000000 1.000000 65.30500 REMARK 290 SMTRY1 15 -1.000000 0.000000 0.000000 65.30500 REMARK 290 SMTRY2 15 0.000000 1.000000 0.000000 65.30500 REMARK 290 SMTRY3 15 0.000000 0.000000 -1.000000 65.30500 REMARK 290 SMTRY1 16 1.000000 0.000000 0.000000 65.30500 REMARK 290 SMTRY2 16 0.000000 -1.000000 0.000000 65.30500 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 65.30500 REMARK 290 SMTRY1 17 0.000000 0.000000 1.000000 65.30500 REMARK 290 SMTRY2 17 1.000000 0.000000 0.000000 65.30500 REMARK 290 SMTRY3 17 0.000000 1.000000 0.000000 65.30500 REMARK 290 SMTRY1 18 0.000000 0.000000 1.000000 65.30500 REMARK 290 SMTRY2 18 -1.000000 0.000000 0.000000 65.30500 REMARK 290 SMTRY3 18 0.000000 -1.000000 0.000000 65.30500 REMARK 290 SMTRY1 19 0.000000 0.000000 -1.000000 65.30500 REMARK 290 SMTRY2 19 -1.000000 0.000000 0.000000 65.30500 REMARK 290 SMTRY3 19 0.000000 1.000000 0.000000 65.30500 REMARK 290 SMTRY1 20 0.000000 0.000000 -1.000000 65.30500 REMARK 290 SMTRY2 20 1.000000 0.000000 0.000000 65.30500 REMARK 290 SMTRY3 20 0.000000 -1.000000 0.000000 65.30500 REMARK 290 SMTRY1 21 0.000000 1.000000 0.000000 65.30500 REMARK 290 SMTRY2 21 0.000000 0.000000 1.000000 65.30500 REMARK 290 SMTRY3 21 1.000000 0.000000 0.000000 65.30500 REMARK 290 SMTRY1 22 0.000000 -1.000000 0.000000 65.30500 REMARK 290 SMTRY2 22 0.000000 0.000000 1.000000 65.30500 REMARK 290 SMTRY3 22 -1.000000 0.000000 0.000000 65.30500 REMARK 290 SMTRY1 23 0.000000 1.000000 0.000000 65.30500 REMARK 290 SMTRY2 23 0.000000 0.000000 -1.000000 65.30500 REMARK 290 SMTRY3 23 -1.000000 0.000000 0.000000 65.30500 REMARK 290 SMTRY1 24 0.000000 -1.000000 0.000000 65.30500 REMARK 290 SMTRY2 24 0.000000 0.000000 -1.000000 65.30500 REMARK 290 SMTRY3 24 1.000000 0.000000 0.000000 65.30500 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 400 REMARK 400 COMPOUND REMARK 400 ENGINEERED RESIDUE IN CHAIN A, SER 218 TO ALA REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ASP A 259 REMARK 465 ASP A 260 REMARK 465 ASP A 261 REMARK 465 ALA A 262 REMARK 465 PRO A 263 REMARK 465 GLU A 264 REMARK 465 GLN A 265 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OD1 ASP A 182 NH1 ARG A 268 3556 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 CYS A 156 CA - CB - SG ANGL. DEV. = 9.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 23 -153.20 -153.86 REMARK 500 THR A 43 -123.16 -116.43 REMARK 500 TRP A 186 35.09 -143.03 REMARK 500 LEU A 270 -140.26 59.41 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A2017 DISTANCE = 6.08 ANGSTROMS REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3ZXX RELATED DB: PDB REMARK 900 STRUCTURE OF SELF-CLEAVED PROTEASE DOMAIN OF PATA DBREF 3ZXY A 10 289 UNP Q52QI9 Q52QI9_PRODI 10 289 SEQADV 3ZXY MET A 8 UNP Q52QI9 EXPRESSION TAG SEQADV 3ZXY GLY A 9 UNP Q52QI9 EXPRESSION TAG SEQADV 3ZXY ALA A 218 UNP Q52QI9 SER 218 ENGINEERED MUTATION SEQADV 3ZXY ASP A 287 UNP Q52QI9 ASN 287 CONFLICT SEQRES 1 A 282 MET GLY SER LEU LYS GLY ASP HIS ASN ILE ARG VAL ALA SEQRES 2 A 282 ILE LEU ASP GLY PRO VAL ASP ILE ALA HIS PRO CYS PHE SEQRES 3 A 282 GLN GLY ALA ASP LEU THR VAL LEU PRO THR LEU ALA PRO SEQRES 4 A 282 THR ALA ALA ARG SER ASP GLY PHE MET SER ALA HIS GLY SEQRES 5 A 282 THR HIS VAL ALA SER ILE ILE PHE GLY GLN PRO GLU THR SEQRES 6 A 282 SER VAL PRO GLY ILE ALA PRO GLN CYS ARG GLY LEU ILE SEQRES 7 A 282 VAL PRO ILE PHE SER ASP ASP ARG ARG ARG ILE THR GLN SEQRES 8 A 282 LEU ASP LEU ALA ARG GLY ILE GLU ARG ALA VAL ASN ALA SEQRES 9 A 282 GLY ALA HIS ILE ILE ASN ILE SER GLY GLY GLU LEU THR SEQRES 10 A 282 ASP PHE GLY GLU ALA ASP GLY TRP LEU GLU ASN ALA VAL SEQRES 11 A 282 SER LEU CYS ARG GLN ASN ASN VAL LEU LEU VAL ALA ALA SEQRES 12 A 282 ALA GLY ASN ASN GLY CYS ASP CYS LEU HIS VAL PRO ALA SEQRES 13 A 282 ALA LEU PRO ALA VAL LEU ALA VAL GLY ALA MET ASP ASP SEQRES 14 A 282 HIS GLY HIS PRO LEU ASP PHE SER ASN TRP GLY SER THR SEQRES 15 A 282 TYR GLU GLN GLN GLY ILE LEU ALA PRO GLY GLU ASP ILE SEQRES 16 A 282 LEU GLY ALA LYS PRO GLY GLY GLY THR GLU ARG LEU SER SEQRES 17 A 282 GLY THR ALA PHE ALA THR PRO ILE VAL SER GLY VAL ALA SEQRES 18 A 282 ALA LEU LEU LEU SER GLU GLN VAL ARG ARG GLY GLU THR SEQRES 19 A 282 PRO ASP PRO GLN LYS VAL ARG GLN LEU LEU LEU GLN SER SEQRES 20 A 282 ALA LEU PRO CYS ASP ASP ASP ALA PRO GLU GLN ALA ARG SEQRES 21 A 282 ARG CYS LEU ALA GLY ARG LEU ASN VAL SER GLY ALA PHE SEQRES 22 A 282 THR LEU LEU LYS GLY GLY ASP MET SER FORMUL 2 HOH *303(H2 O) HELIX 1 1 HIS A 30 GLN A 34 5 5 HELIX 2 2 GLY A 53 GLY A 68 1 16 HELIX 3 3 THR A 97 ALA A 111 1 15 HELIX 4 4 ASP A 130 ASN A 143 1 14 HELIX 5 5 GLY A 187 GLN A 193 1 7 HELIX 6 6 GLY A 216 ARG A 238 1 23 HELIX 7 7 ASP A 243 ALA A 255 1 13 HELIX 8 8 ALA A 266 LEU A 270 5 5 HELIX 9 9 ASN A 275 GLY A 286 1 12 SHEET 1 AA 7 ASP A 37 VAL A 40 0 SHEET 2 AA 7 ARG A 82 PRO A 87 1 O GLY A 83 N THR A 39 SHEET 3 AA 7 ARG A 18 ASP A 23 1 O VAL A 19 N LEU A 84 SHEET 4 AA 7 ILE A 115 ILE A 118 1 O ILE A 115 N ALA A 20 SHEET 5 AA 7 LEU A 146 ALA A 150 1 O LEU A 146 N ILE A 116 SHEET 6 AA 7 LEU A 169 MET A 174 1 O LEU A 169 N ALA A 149 SHEET 7 AA 7 GLY A 194 PRO A 198 1 O ILE A 195 N GLY A 172 SHEET 1 AB 2 GLU A 122 THR A 124 0 SHEET 2 AB 2 LEU A 159 VAL A 161 -1 O LEU A 159 N THR A 124 SHEET 1 AC 2 ILE A 202 ALA A 205 0 SHEET 2 AC 2 THR A 211 LEU A 214 -1 O GLU A 212 N GLY A 204 SSBOND 1 CYS A 156 CYS A 158 1555 1555 2.09 SSBOND 2 CYS A 258 CYS A 269 1555 1555 2.07 CISPEP 1 VAL A 161 PRO A 162 0 8.66 CRYST1 130.610 130.610 130.610 90.00 90.00 90.00 I 2 3 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007656 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007656 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007656 0.00000