HEADER HYDROLASE 22-AUG-11 3ZYC TITLE DYNAMIN 1 GTPASE GED FUSION DIMER COMPLEXED WITH GMPPCP COMPND MOL_ID: 1; COMPND 2 MOLECULE: DYNAMIN-1; COMPND 3 CHAIN: A, D; COMPND 4 FRAGMENT: GTPASE DOMAIN, RESIDUES 6-320, GTPASE EFFECTOR DOMAIN, COMPND 5 RESIDUES 726-750; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3) KEYWDS HYDROLASE, MEMBRANE FISSION, NUCLEOTIDE-BINDING, ENDOCYTOSIS, MOTOR KEYWDS 2 PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR J.S.CHAPPIE,J.A.MEARS,S.FANG,M.LEONARD,S.L.SCHMID,R.A.MILLIGAN, AUTHOR 2 J.E.HINSHAW,F.DYDA REVDAT 5 20-DEC-23 3ZYC 1 REMARK LINK REVDAT 4 15-MAY-19 3ZYC 1 REMARK REVDAT 3 08-MAY-19 3ZYC 1 REMARK REVDAT 2 28-JUN-17 3ZYC 1 REMARK REVDAT 1 12-OCT-11 3ZYC 0 JRNL AUTH J.S.CHAPPIE,J.A.MEARS,S.FANG,M.LEONARD,S.L.SCHMID, JRNL AUTH 2 R.A.MILLIGAN,J.E.HINSHAW,F.DYDA JRNL TITL A PSEUDOATOMIC MODEL OF THE DYNAMIN POLYMER IDENTIFIES A JRNL TITL 2 HYDROLYSIS-DEPENDENT POWERSTROKE. JRNL REF CELL(CAMBRIDGE,MASS.) V. 147 209 2011 JRNL REFN ISSN 0092-8674 JRNL PMID 21962517 JRNL DOI 10.1016/J.CELL.2011.09.003 REMARK 2 REMARK 2 RESOLUTION. 2.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.3 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 10000.000 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 99.0 REMARK 3 NUMBER OF REFLECTIONS : 34188 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.225 REMARK 3 FREE R VALUE : 0.269 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 2.700 REMARK 3 FREE R VALUE TEST SET COUNT : 941 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.009 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5240 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 66 REMARK 3 SOLVENT ATOMS : 413 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -3.16700 REMARK 3 B22 (A**2) : 2.89700 REMARK 3 B33 (A**2) : 0.27000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 6.70000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.006 REMARK 3 BOND ANGLES (DEGREES) : 2.140 REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.34 REMARK 3 BSOL : 18.51 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PARHCSDX.PRO REMARK 3 PARAMETER FILE 2 : GMPPCP.PARAM REMARK 3 PARAMETER FILE 3 : PARAM19.SOL REMARK 3 PARAMETER FILE 4 : NULL REMARK 3 TOPOLOGY FILE 1 : TOPHCSDX.PRO REMARK 3 TOPOLOGY FILE 2 : GMPPCP.TOP REMARK 3 TOPOLOGY FILE 3 : TOPH19_MOD.SOL REMARK 3 TOPOLOGY FILE 4 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3ZYC COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 22-AUG-11. REMARK 100 THE DEPOSITION ID IS D_1290049416. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-SEP-10 REMARK 200 TEMPERATURE (KELVIN) : 95 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU MICROMAX-007 HF REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : MULTILAYER MIRROR REMARK 200 OPTICS : CONFOCAL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RIGAKU-MSC SATURN 200 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 34206 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.200 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 200 DATA REDUNDANCY : 4.270 REMARK 200 R MERGE (I) : 0.08000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.2300 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.26 REMARK 200 COMPLETENESS FOR SHELL (%) : 90.5 REMARK 200 DATA REDUNDANCY IN SHELL : 2.57 REMARK 200 R MERGE FOR SHELL (I) : 0.34000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.950 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 2X2E REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 43.71 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.19 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: GGGMPPCP WAS CRYSTALLIZED BY SITTING REMARK 280 DROP VAPOR DIFFUSION IN 0.1M HEPES PH 7.0, 200 MM MGCL2, AND 24- REMARK 280 30% PEG 2000 MME USING A DROP SIZE OF 3 MICROL AND RESERVOIR REMARK 280 VOLUME OF 65 MICROL. CRYSTALS GREW IN 3-5 DAYS AT 20C. THE REMARK 280 ADDITION OF 200 MM LICL, NACL, KCL, OR NH4CL TO THE RESERVOIR REMARK 280 SOLUTION DRAMATICALLY IMPROVED THE CRYSTALS. CRYSTALS GROWN IN REMARK 280 THE PRESENCE OF KCL SHOWED THE BEST DIFFRACTION., VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 41.31750 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5010 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 30210 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -25.1 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 1 REMARK 465 PRO A 2 REMARK 465 GLU A 3 REMARK 465 PHE A 4 REMARK 465 GLU A 312 REMARK 465 GLU A 313 REMARK 465 TYR A 314 REMARK 465 LYS A 315 REMARK 465 ASN A 316 REMARK 465 PHE A 317 REMARK 465 ARG A 318 REMARK 465 PRO A 319 REMARK 465 ASP A 320 REMARK 465 LYS A 321 REMARK 465 HIS A 322 REMARK 465 GLY A 323 REMARK 465 THR A 324 REMARK 465 ASP A 325 REMARK 465 SER A 326 REMARK 465 ARG A 327 REMARK 465 VAL A 328 REMARK 465 THR A 749 REMARK 465 VAL A 750 REMARK 465 GLY D 1 REMARK 465 PRO D 2 REMARK 465 GLU D 3 REMARK 465 PHE D 4 REMARK 465 ASP D 320 REMARK 465 LYS D 321 REMARK 465 HIS D 322 REMARK 465 GLY D 323 REMARK 465 THR D 324 REMARK 465 ASP D 325 REMARK 465 SER D 326 REMARK 465 THR D 749 REMARK 465 VAL D 750 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 56 -7.81 -147.13 REMARK 500 VAL A 64 -68.11 -109.45 REMARK 500 ASN A 112 50.33 -115.47 REMARK 500 SER A 126 148.27 -170.53 REMARK 500 ASN A 168 -5.71 75.39 REMARK 500 ASN A 178 21.07 -75.93 REMARK 500 ASP D 28 -133.68 55.26 REMARK 500 ASP D 30 74.27 -62.95 REMARK 500 SER D 41 17.22 81.17 REMARK 500 PHE D 56 -2.50 -157.21 REMARK 500 GLU D 79 90.30 49.68 REMARK 500 TYR D 80 -169.55 -160.29 REMARK 500 CYS D 86 66.90 -111.56 REMARK 500 LYS D 113 -1.84 68.35 REMARK 500 ASN D 131 86.45 -66.88 REMARK 500 ASN D 168 43.81 -100.79 REMARK 500 ASN D 178 23.50 -77.09 REMARK 500 ASP D 726 3.00 -64.98 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A2007 DISTANCE = 6.28 ANGSTROMS REMARK 525 HOH D2003 DISTANCE = 6.10 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A1750 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER A 45 OG REMARK 620 2 THR A 65 OG1 84.9 REMARK 620 3 GCP A1749 O2G 169.0 85.7 REMARK 620 4 GCP A1749 O1B 83.5 161.4 104.1 REMARK 620 5 HOH A1751 O 77.4 85.6 96.2 77.8 REMARK 620 6 HOH A1752 O 89.7 101.9 97.9 92.5 164.6 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG D1750 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER D 45 OG REMARK 620 2 THR D 65 OG1 97.2 REMARK 620 3 GCP D1749 O1B 87.8 172.7 REMARK 620 4 GCP D1749 O2G 170.1 80.3 95.6 REMARK 620 5 HOH D1751 O 87.9 85.7 89.3 101.4 REMARK 620 6 HOH D1752 O 83.3 92.0 93.8 87.2 170.5 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GCP A 1749 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 1750 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GCP D 1749 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG D 1750 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2X2F RELATED DB: PDB REMARK 900 DYNAMIN 1 GTPASE DIMER, SHORT AXIS FORM REMARK 900 RELATED ID: 2DYN RELATED DB: PDB REMARK 900 DYNAMIN (PLECKSTRIN HOMOLOGY DOMAIN) (DYNPH) REMARK 900 RELATED ID: 2X2E RELATED DB: PDB REMARK 900 DYNAMIN GTPASE DIMER, LONG AXIS FORM REMARK 900 RELATED ID: 1DYN RELATED DB: PDB REMARK 900 DYNAMIN (PLECKSTRIN HOMOLOGY DOMAIN) (DYNPH) DBREF 3ZYC A 6 320 UNP Q05193 DYN1_HUMAN 6 320 DBREF 3ZYC A 726 750 UNP Q05193 DYN1_HUMAN 726 750 DBREF 3ZYC D 6 320 UNP Q05193 DYN1_HUMAN 6 320 DBREF 3ZYC D 726 750 UNP Q05193 DYN1_HUMAN 726 750 SEQADV 3ZYC GLY A 1 UNP Q05193 CLONING ARTIFACT SEQADV 3ZYC PRO A 2 UNP Q05193 CLONING ARTIFACT SEQADV 3ZYC GLU A 3 UNP Q05193 CLONING ARTIFACT SEQADV 3ZYC PHE A 4 UNP Q05193 CLONING ARTIFACT SEQADV 3ZYC SER A 5 UNP Q05193 CLONING ARTIFACT SEQADV 3ZYC LYS A 321 UNP Q05193 LINKER SEQADV 3ZYC HIS A 322 UNP Q05193 LINKER SEQADV 3ZYC GLY A 323 UNP Q05193 LINKER SEQADV 3ZYC THR A 324 UNP Q05193 LINKER SEQADV 3ZYC ASP A 325 UNP Q05193 LINKER SEQADV 3ZYC SER A 326 UNP Q05193 LINKER SEQADV 3ZYC ARG A 327 UNP Q05193 LINKER SEQADV 3ZYC VAL A 328 UNP Q05193 LINKER SEQADV 3ZYC ASN A 744 UNP Q05193 ASP 744 VARIANT SEQADV 3ZYC GLY D 1 UNP Q05193 CLONING ARTIFACT SEQADV 3ZYC PRO D 2 UNP Q05193 CLONING ARTIFACT SEQADV 3ZYC GLU D 3 UNP Q05193 CLONING ARTIFACT SEQADV 3ZYC PHE D 4 UNP Q05193 CLONING ARTIFACT SEQADV 3ZYC SER D 5 UNP Q05193 CLONING ARTIFACT SEQADV 3ZYC LYS D 321 UNP Q05193 LINKER SEQADV 3ZYC HIS D 322 UNP Q05193 LINKER SEQADV 3ZYC GLY D 323 UNP Q05193 LINKER SEQADV 3ZYC THR D 324 UNP Q05193 LINKER SEQADV 3ZYC ASP D 325 UNP Q05193 LINKER SEQADV 3ZYC SER D 326 UNP Q05193 LINKER SEQADV 3ZYC ARG D 327 UNP Q05193 LINKER SEQADV 3ZYC VAL D 328 UNP Q05193 LINKER SEQADV 3ZYC ASN D 744 UNP Q05193 ASP 744 VARIANT SEQRES 1 A 353 GLY PRO GLU PHE SER MET GLU ASP LEU ILE PRO LEU VAL SEQRES 2 A 353 ASN ARG LEU GLN ASP ALA PHE SER ALA ILE GLY GLN ASN SEQRES 3 A 353 ALA ASP LEU ASP LEU PRO GLN ILE ALA VAL VAL GLY GLY SEQRES 4 A 353 GLN SER ALA GLY LYS SER SER VAL LEU GLU ASN PHE VAL SEQRES 5 A 353 GLY ARG ASP PHE LEU PRO ARG GLY SER GLY ILE VAL THR SEQRES 6 A 353 ARG ARG PRO LEU VAL LEU GLN LEU VAL ASN ALA THR THR SEQRES 7 A 353 GLU TYR ALA GLU PHE LEU HIS CYS LYS GLY LYS LYS PHE SEQRES 8 A 353 THR ASP PHE GLU GLU VAL ARG LEU GLU ILE GLU ALA GLU SEQRES 9 A 353 THR ASP ARG VAL THR GLY THR ASN LYS GLY ILE SER PRO SEQRES 10 A 353 VAL PRO ILE ASN LEU ARG VAL TYR SER PRO HIS VAL LEU SEQRES 11 A 353 ASN LEU THR LEU VAL ASP LEU PRO GLY MET THR LYS VAL SEQRES 12 A 353 PRO VAL GLY ASP GLN PRO PRO ASP ILE GLU PHE GLN ILE SEQRES 13 A 353 ARG ASP MET LEU MET GLN PHE VAL THR LYS GLU ASN CYS SEQRES 14 A 353 LEU ILE LEU ALA VAL SER PRO ALA ASN SER ASP LEU ALA SEQRES 15 A 353 ASN SER ASP ALA LEU LYS VAL ALA LYS GLU VAL ASP PRO SEQRES 16 A 353 GLN GLY GLN ARG THR ILE GLY VAL ILE THR LYS LEU ASP SEQRES 17 A 353 LEU MET ASP GLU GLY THR ASP ALA ARG ASP VAL LEU GLU SEQRES 18 A 353 ASN LYS LEU LEU PRO LEU ARG ARG GLY TYR ILE GLY VAL SEQRES 19 A 353 VAL ASN ARG SER GLN LYS ASP ILE ASP GLY LYS LYS ASP SEQRES 20 A 353 ILE THR ALA ALA LEU ALA ALA GLU ARG LYS PHE PHE LEU SEQRES 21 A 353 SER HIS PRO SER TYR ARG HIS LEU ALA ASP ARG MET GLY SEQRES 22 A 353 THR PRO TYR LEU GLN LYS VAL LEU ASN GLN GLN LEU THR SEQRES 23 A 353 ASN HIS ILE ARG ASP THR LEU PRO GLY LEU ARG ASN LYS SEQRES 24 A 353 LEU GLN SER GLN LEU LEU SER ILE GLU LYS GLU VAL GLU SEQRES 25 A 353 GLU TYR LYS ASN PHE ARG PRO ASP LYS HIS GLY THR ASP SEQRES 26 A 353 SER ARG VAL ASP GLU MET LEU ARG MET TYR HIS ALA LEU SEQRES 27 A 353 LYS GLU ALA LEU SER ILE ILE GLY ASN ILE ASN THR THR SEQRES 28 A 353 THR VAL SEQRES 1 D 353 GLY PRO GLU PHE SER MET GLU ASP LEU ILE PRO LEU VAL SEQRES 2 D 353 ASN ARG LEU GLN ASP ALA PHE SER ALA ILE GLY GLN ASN SEQRES 3 D 353 ALA ASP LEU ASP LEU PRO GLN ILE ALA VAL VAL GLY GLY SEQRES 4 D 353 GLN SER ALA GLY LYS SER SER VAL LEU GLU ASN PHE VAL SEQRES 5 D 353 GLY ARG ASP PHE LEU PRO ARG GLY SER GLY ILE VAL THR SEQRES 6 D 353 ARG ARG PRO LEU VAL LEU GLN LEU VAL ASN ALA THR THR SEQRES 7 D 353 GLU TYR ALA GLU PHE LEU HIS CYS LYS GLY LYS LYS PHE SEQRES 8 D 353 THR ASP PHE GLU GLU VAL ARG LEU GLU ILE GLU ALA GLU SEQRES 9 D 353 THR ASP ARG VAL THR GLY THR ASN LYS GLY ILE SER PRO SEQRES 10 D 353 VAL PRO ILE ASN LEU ARG VAL TYR SER PRO HIS VAL LEU SEQRES 11 D 353 ASN LEU THR LEU VAL ASP LEU PRO GLY MET THR LYS VAL SEQRES 12 D 353 PRO VAL GLY ASP GLN PRO PRO ASP ILE GLU PHE GLN ILE SEQRES 13 D 353 ARG ASP MET LEU MET GLN PHE VAL THR LYS GLU ASN CYS SEQRES 14 D 353 LEU ILE LEU ALA VAL SER PRO ALA ASN SER ASP LEU ALA SEQRES 15 D 353 ASN SER ASP ALA LEU LYS VAL ALA LYS GLU VAL ASP PRO SEQRES 16 D 353 GLN GLY GLN ARG THR ILE GLY VAL ILE THR LYS LEU ASP SEQRES 17 D 353 LEU MET ASP GLU GLY THR ASP ALA ARG ASP VAL LEU GLU SEQRES 18 D 353 ASN LYS LEU LEU PRO LEU ARG ARG GLY TYR ILE GLY VAL SEQRES 19 D 353 VAL ASN ARG SER GLN LYS ASP ILE ASP GLY LYS LYS ASP SEQRES 20 D 353 ILE THR ALA ALA LEU ALA ALA GLU ARG LYS PHE PHE LEU SEQRES 21 D 353 SER HIS PRO SER TYR ARG HIS LEU ALA ASP ARG MET GLY SEQRES 22 D 353 THR PRO TYR LEU GLN LYS VAL LEU ASN GLN GLN LEU THR SEQRES 23 D 353 ASN HIS ILE ARG ASP THR LEU PRO GLY LEU ARG ASN LYS SEQRES 24 D 353 LEU GLN SER GLN LEU LEU SER ILE GLU LYS GLU VAL GLU SEQRES 25 D 353 GLU TYR LYS ASN PHE ARG PRO ASP LYS HIS GLY THR ASP SEQRES 26 D 353 SER ARG VAL ASP GLU MET LEU ARG MET TYR HIS ALA LEU SEQRES 27 D 353 LYS GLU ALA LEU SER ILE ILE GLY ASN ILE ASN THR THR SEQRES 28 D 353 THR VAL HET GCP A1749 32 HET MG A1750 1 HET GCP D1749 32 HET MG D1750 1 HETNAM GCP PHOSPHOMETHYLPHOSPHONIC ACID GUANYLATE ESTER HETNAM MG MAGNESIUM ION FORMUL 3 GCP 2(C11 H18 N5 O13 P3) FORMUL 4 MG 2(MG 2+) FORMUL 7 HOH *413(H2 O) HELIX 1 1 SER A 5 GLY A 24 1 20 HELIX 2 2 GLY A 43 GLY A 53 1 11 HELIX 3 3 ASP A 93 GLY A 110 1 18 HELIX 4 4 ASP A 151 THR A 165 1 15 HELIX 5 5 ASP A 180 ASN A 183 5 4 HELIX 6 6 SER A 184 ASP A 194 1 11 HELIX 7 7 LYS A 206 MET A 210 5 5 HELIX 8 8 ALA A 216 GLU A 221 1 6 HELIX 9 9 SER A 238 GLY A 244 1 7 HELIX 10 10 ASP A 247 HIS A 262 1 16 HELIX 11 11 TYR A 265 MET A 272 5 8 HELIX 12 12 GLY A 273 VAL A 311 1 39 HELIX 13 13 LEU A 729 THR A 748 1 20 HELIX 14 14 SER D 5 GLY D 24 1 20 HELIX 15 15 GLY D 43 GLY D 53 1 11 HELIX 16 16 ASP D 93 GLY D 110 1 18 HELIX 17 17 ASP D 151 THR D 165 1 15 HELIX 18 18 ASP D 180 ASN D 183 5 4 HELIX 19 19 SER D 184 ASP D 194 1 11 HELIX 20 20 LYS D 206 MET D 210 5 5 HELIX 21 21 ALA D 216 GLU D 221 1 6 HELIX 22 22 SER D 238 GLY D 244 1 7 HELIX 23 23 ASP D 247 HIS D 262 1 16 HELIX 24 24 TYR D 265 MET D 272 5 8 HELIX 25 25 GLY D 273 PHE D 317 1 45 HELIX 26 26 ASP D 726 THR D 747 1 22 SHEET 1 AA 8 TYR A 80 PHE A 83 0 SHEET 2 AA 8 ILE A 120 SER A 126 -1 O ARG A 123 N GLU A 82 SHEET 3 AA 8 LEU A 69 ASN A 75 1 O VAL A 70 N LEU A 122 SHEET 4 AA 8 THR A 133 ASP A 136 -1 O LEU A 134 N LEU A 71 SHEET 5 AA 8 ILE A 34 VAL A 37 1 O ILE A 34 N VAL A 135 SHEET 6 AA 8 LEU A 170 PRO A 176 1 O LEU A 170 N ALA A 35 SHEET 7 AA 8 THR A 200 THR A 205 1 O ILE A 201 N ALA A 173 SHEET 8 AA 8 TYR A 231 GLY A 233 1 O ILE A 232 N ILE A 204 SHEET 1 DA 8 TYR D 80 PHE D 83 0 SHEET 2 DA 8 ILE D 120 SER D 126 -1 O ARG D 123 N GLU D 82 SHEET 3 DA 8 LEU D 69 ASN D 75 1 O VAL D 70 N LEU D 122 SHEET 4 DA 8 THR D 133 ASP D 136 -1 O LEU D 134 N LEU D 71 SHEET 5 DA 8 GLN D 33 VAL D 37 1 O ILE D 34 N VAL D 135 SHEET 6 DA 8 CYS D 169 PRO D 176 1 O LEU D 170 N ALA D 35 SHEET 7 DA 8 THR D 200 THR D 205 1 O ILE D 201 N ALA D 173 SHEET 8 DA 8 TYR D 231 GLY D 233 1 O ILE D 232 N ILE D 204 LINK OG SER A 45 MG MG A1750 1555 1555 2.23 LINK OG1 THR A 65 MG MG A1750 1555 1555 2.15 LINK O2G GCP A1749 MG MG A1750 1555 1555 2.00 LINK O1B GCP A1749 MG MG A1750 1555 1555 2.18 LINK MG MG A1750 O HOH A1751 1555 1555 2.08 LINK MG MG A1750 O HOH A1752 1555 1555 2.07 LINK OG SER D 45 MG MG D1750 1555 1555 2.05 LINK OG1 THR D 65 MG MG D1750 1555 1555 2.07 LINK O1B GCP D1749 MG MG D1750 1555 1555 2.17 LINK O2G GCP D1749 MG MG D1750 1555 1555 2.19 LINK MG MG D1750 O HOH D1751 1555 1555 2.08 LINK MG MG D1750 O HOH D1752 1555 1555 2.05 SITE 1 AC1 28 GLN A 40 SER A 41 ALA A 42 GLY A 43 SITE 2 AC1 28 LYS A 44 SER A 45 SER A 46 ARG A 59 SITE 3 AC1 28 GLY A 60 SER A 61 GLY A 62 VAL A 64 SITE 4 AC1 28 THR A 65 GLY A 139 LYS A 206 ASP A 208 SITE 5 AC1 28 LEU A 209 ASN A 236 ARG A 237 SER A 238 SITE 6 AC1 28 GLN A 239 ILE A 242 MG A1750 HOH A1751 SITE 7 AC1 28 HOH A1752 HOH A2036 HOH A2227 ASP D 211 SITE 1 AC2 5 SER A 45 THR A 65 GCP A1749 HOH A1751 SITE 2 AC2 5 HOH A1752 SITE 1 AC3 30 ASP A 211 HOH A2158 GLN D 40 SER D 41 SITE 2 AC3 30 ALA D 42 GLY D 43 LYS D 44 SER D 45 SITE 3 AC3 30 SER D 46 ARG D 59 GLY D 60 SER D 61 SITE 4 AC3 30 GLY D 62 VAL D 64 THR D 65 GLY D 139 SITE 5 AC3 30 LYS D 206 ASP D 208 LEU D 209 VAL D 235 SITE 6 AC3 30 ASN D 236 ARG D 237 SER D 238 GLN D 239 SITE 7 AC3 30 ILE D 242 MG D1750 HOH D1751 HOH D1752 SITE 8 AC3 30 HOH D2023 HOH D2043 SITE 1 AC4 5 SER D 45 THR D 65 GCP D1749 HOH D1751 SITE 2 AC4 5 HOH D1752 CRYST1 44.151 82.635 95.014 90.00 96.68 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.022650 0.000000 0.002653 0.00000 SCALE2 0.000000 0.012101 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010597 0.00000 MTRIX1 1 -1.000000 0.000300 -0.004200 31.36050 1 MTRIX2 1 0.000200 1.000000 0.009200 -0.30530 1 MTRIX3 1 0.004200 0.009200 -0.999900 12.56100 1