HEADER IMMUNE SYSTEM 02-SEP-11 3ZZR TITLE CRYSTAL STRUCTURE OF THE CG11501 PROTEIN IN P21212 SPACEGROUP COMPND MOL_ID: 1; COMPND 2 MOLECULE: CG11501; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: RH38110P; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: DROSOPHILA MELANOGASTER; SOURCE 3 ORGANISM_COMMON: FRUIT FLY; SOURCE 4 ORGANISM_TAXID: 7227; SOURCE 5 EXPRESSION_SYSTEM: DROSOPHILA MELANOGASTER; SOURCE 6 EXPRESSION_SYSTEM_COMMON: FRUIT FLY; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 7227; SOURCE 8 EXPRESSION_SYSTEM_CELL_LINE: S2; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PMT/V5-HIS A KEYWDS IMMUNE SYSTEM, IMMUNE RESPONSE EXPDTA X-RAY DIFFRACTION AUTHOR F.COSTE,A.ROUSSEL REVDAT 2 20-DEC-23 3ZZR 1 REMARK LINK REVDAT 1 11-JUL-12 3ZZR 0 JRNL AUTH F.COSTE,C.KEMP,V.BOBEZEAU,C.HETRU,C.KELLENBERGER,J.-L.IMLER, JRNL AUTH 2 A.ROUSSEL JRNL TITL CRYSTAL STRUCTURE OF DIEDEL, A MARKER OF THE IMMUNE RESPONSE JRNL TITL 2 OF DROSOPHILA MELANOGASTER. JRNL REF PLOS ONE V. 7 33416 2012 JRNL REFN ESSN 1932-6203 JRNL PMID 22442689 JRNL DOI 10.1371/JOURNAL.PONE.0033416 REMARK 2 REMARK 2 RESOLUTION. 1.45 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.6.0117 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.45 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 3 NUMBER OF REFLECTIONS : 14757 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.161 REMARK 3 R VALUE (WORKING SET) : 0.160 REMARK 3 FREE R VALUE : 0.196 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 776 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.45 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.49 REMARK 3 REFLECTION IN BIN (WORKING SET) : 915 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 94.70 REMARK 3 BIN R VALUE (WORKING SET) : 0.1980 REMARK 3 BIN FREE R VALUE SET COUNT : 50 REMARK 3 BIN FREE R VALUE : 0.1910 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 732 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 34 REMARK 3 SOLVENT ATOMS : 150 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 10.95 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 12.29 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.02000 REMARK 3 B22 (A**2) : 0.01000 REMARK 3 B33 (A**2) : -0.02000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.068 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.072 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.039 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.869 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.962 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.941 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 779 ; 0.021 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 543 ; 0.007 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 1058 ; 1.988 ; 1.986 REMARK 3 BOND ANGLES OTHERS (DEGREES): 1292 ; 1.309 ; 3.015 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 94 ; 6.820 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 38 ;36.199 ;23.947 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 120 ;12.960 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 7 ;16.683 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 112 ; 0.534 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 861 ; 0.008 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 162 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 12 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 25 A 30 REMARK 3 ORIGIN FOR THE GROUP (A): 15.5800 46.4420 1.3100 REMARK 3 T TENSOR REMARK 3 T11: 0.0688 T22: 0.0396 REMARK 3 T33: 0.0452 T12: -0.0148 REMARK 3 T13: -0.0021 T23: -0.0026 REMARK 3 L TENSOR REMARK 3 L11: 0.7105 L22: 15.1049 REMARK 3 L33: 3.6136 L12: 2.4563 REMARK 3 L13: -1.2721 L23: -7.2092 REMARK 3 S TENSOR REMARK 3 S11: 0.1483 S12: -0.1031 S13: 0.0132 REMARK 3 S21: 0.4303 S22: -0.2002 S23: -0.0665 REMARK 3 S31: -0.2144 S32: 0.1161 S33: 0.0519 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 31 A 35 REMARK 3 ORIGIN FOR THE GROUP (A): 13.7890 30.1540 5.7970 REMARK 3 T TENSOR REMARK 3 T11: 0.0491 T22: 0.0652 REMARK 3 T33: 0.0339 T12: 0.0069 REMARK 3 T13: -0.0029 T23: -0.0020 REMARK 3 L TENSOR REMARK 3 L11: 0.5303 L22: 8.7493 REMARK 3 L33: 0.6232 L12: 1.9416 REMARK 3 L13: 0.4046 L23: 1.8858 REMARK 3 S TENSOR REMARK 3 S11: 0.0217 S12: 0.0216 S13: -0.0549 REMARK 3 S21: 0.1719 S22: -0.0149 S23: -0.1101 REMARK 3 S31: 0.0699 S32: 0.0540 S33: -0.0068 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 36 A 41 REMARK 3 ORIGIN FOR THE GROUP (A): 6.7930 18.5940 2.2110 REMARK 3 T TENSOR REMARK 3 T11: 0.0399 T22: 0.0218 REMARK 3 T33: 0.0763 T12: 0.0114 REMARK 3 T13: -0.0271 T23: -0.0201 REMARK 3 L TENSOR REMARK 3 L11: 1.2867 L22: 4.3603 REMARK 3 L33: 6.2474 L12: 0.7608 REMARK 3 L13: 2.0867 L23: 0.7016 REMARK 3 S TENSOR REMARK 3 S11: 0.1160 S12: 0.0087 S13: -0.0965 REMARK 3 S21: -0.0656 S22: -0.0289 S23: 0.2422 REMARK 3 S31: 0.1494 S32: 0.0665 S33: -0.0871 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 42 A 48 REMARK 3 ORIGIN FOR THE GROUP (A): 12.0170 25.1440 -4.4140 REMARK 3 T TENSOR REMARK 3 T11: 0.0763 T22: 0.0648 REMARK 3 T33: 0.0176 T12: 0.0327 REMARK 3 T13: 0.0021 T23: -0.0219 REMARK 3 L TENSOR REMARK 3 L11: 5.3658 L22: 3.9509 REMARK 3 L33: 1.7994 L12: -3.0919 REMARK 3 L13: 2.8287 L23: -2.0159 REMARK 3 S TENSOR REMARK 3 S11: 0.1882 S12: 0.2933 S13: -0.1234 REMARK 3 S21: -0.2946 S22: -0.1819 S23: 0.0286 REMARK 3 S31: 0.1869 S32: 0.1036 S33: -0.0062 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 49 A 53 REMARK 3 ORIGIN FOR THE GROUP (A): 17.9240 18.4530 4.3120 REMARK 3 T TENSOR REMARK 3 T11: 0.0388 T22: 0.0458 REMARK 3 T33: 0.0983 T12: 0.0009 REMARK 3 T13: -0.0133 T23: 0.0301 REMARK 3 L TENSOR REMARK 3 L11: 11.0249 L22: 23.2163 REMARK 3 L33: 18.4446 L12: 4.2442 REMARK 3 L13: -8.5962 L23: -14.6607 REMARK 3 S TENSOR REMARK 3 S11: 0.1014 S12: -0.4778 S13: -0.6748 REMARK 3 S21: 0.1342 S22: -0.8393 S23: -0.4284 REMARK 3 S31: 0.2233 S32: 0.7071 S33: 0.7380 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 54 A 59 REMARK 3 ORIGIN FOR THE GROUP (A): 14.8110 29.2290 1.9620 REMARK 3 T TENSOR REMARK 3 T11: 0.0453 T22: 0.0618 REMARK 3 T33: 0.0302 T12: 0.0078 REMARK 3 T13: -0.0036 T23: -0.0021 REMARK 3 L TENSOR REMARK 3 L11: 0.5986 L22: 14.3194 REMARK 3 L33: 0.4640 L12: -2.1673 REMARK 3 L13: 0.1928 L23: -1.9110 REMARK 3 S TENSOR REMARK 3 S11: -0.0156 S12: 0.0437 S13: 0.0502 REMARK 3 S21: 0.0621 S22: -0.0327 S23: -0.2512 REMARK 3 S31: -0.0092 S32: 0.0635 S33: 0.0483 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 60 A 72 REMARK 3 ORIGIN FOR THE GROUP (A): 12.8520 39.3120 -3.4640 REMARK 3 T TENSOR REMARK 3 T11: 0.0480 T22: 0.0575 REMARK 3 T33: 0.0516 T12: -0.0006 REMARK 3 T13: -0.0050 T23: 0.0067 REMARK 3 L TENSOR REMARK 3 L11: 1.4390 L22: 1.1193 REMARK 3 L33: 0.6957 L12: 0.0479 REMARK 3 L13: -0.7308 L23: -0.5813 REMARK 3 S TENSOR REMARK 3 S11: -0.0280 S12: 0.0596 S13: 0.0789 REMARK 3 S21: -0.0079 S22: 0.0282 S23: -0.0026 REMARK 3 S31: 0.0048 S32: -0.0179 S33: -0.0002 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 73 A 83 REMARK 3 ORIGIN FOR THE GROUP (A): 17.5650 50.0860 -6.1430 REMARK 3 T TENSOR REMARK 3 T11: 0.0282 T22: 0.0354 REMARK 3 T33: 0.0626 T12: 0.0005 REMARK 3 T13: 0.0061 T23: 0.0091 REMARK 3 L TENSOR REMARK 3 L11: 4.7598 L22: 4.2629 REMARK 3 L33: 1.8009 L12: 2.2519 REMARK 3 L13: 1.9190 L23: 0.6708 REMARK 3 S TENSOR REMARK 3 S11: 0.0058 S12: 0.1251 S13: -0.0815 REMARK 3 S21: 0.0167 S22: 0.0715 S23: -0.1722 REMARK 3 S31: -0.0016 S32: -0.0080 S33: -0.0773 REMARK 3 REMARK 3 TLS GROUP : 9 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 84 A 101 REMARK 3 ORIGIN FOR THE GROUP (A): 5.0210 37.2650 1.1210 REMARK 3 T TENSOR REMARK 3 T11: 0.0325 T22: 0.0474 REMARK 3 T33: 0.0542 T12: 0.0066 REMARK 3 T13: -0.0061 T23: 0.0024 REMARK 3 L TENSOR REMARK 3 L11: 0.7950 L22: 2.6796 REMARK 3 L33: 0.5073 L12: 0.6579 REMARK 3 L13: -0.4320 L23: -0.8534 REMARK 3 S TENSOR REMARK 3 S11: 0.0344 S12: 0.0027 S13: 0.0276 REMARK 3 S21: 0.0198 S22: 0.0178 S23: 0.1292 REMARK 3 S31: -0.0201 S32: -0.0259 S33: -0.0523 REMARK 3 REMARK 3 TLS GROUP : 10 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 102 A 106 REMARK 3 ORIGIN FOR THE GROUP (A): 3.4920 23.0720 2.2980 REMARK 3 T TENSOR REMARK 3 T11: 0.0252 T22: 0.0818 REMARK 3 T33: 0.0875 T12: 0.0262 REMARK 3 T13: -0.0359 T23: -0.0365 REMARK 3 L TENSOR REMARK 3 L11: 10.0329 L22: 5.6300 REMARK 3 L33: 7.8128 L12: 1.1135 REMARK 3 L13: 8.7601 L23: 0.0770 REMARK 3 S TENSOR REMARK 3 S11: 0.2855 S12: 0.1672 S13: -0.0719 REMARK 3 S21: -0.0838 S22: -0.1142 S23: 0.5192 REMARK 3 S31: 0.2849 S32: 0.2020 S33: -0.1713 REMARK 3 REMARK 3 TLS GROUP : 11 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 107 A 115 REMARK 3 ORIGIN FOR THE GROUP (A): 15.6230 35.2490 9.8330 REMARK 3 T TENSOR REMARK 3 T11: 0.0578 T22: 0.0505 REMARK 3 T33: 0.0325 T12: -0.0060 REMARK 3 T13: -0.0082 T23: 0.0038 REMARK 3 L TENSOR REMARK 3 L11: 1.6465 L22: 3.8371 REMARK 3 L33: 0.1836 L12: 2.0027 REMARK 3 L13: 0.2251 L23: 0.1802 REMARK 3 S TENSOR REMARK 3 S11: -0.0296 S12: 0.0268 S13: -0.0284 REMARK 3 S21: -0.0923 S22: 0.0024 S23: -0.0884 REMARK 3 S31: 0.0185 S32: -0.0006 S33: 0.0272 REMARK 3 REMARK 3 TLS GROUP : 12 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 116 A 119 REMARK 3 ORIGIN FOR THE GROUP (A): 22.0460 50.3650 10.4910 REMARK 3 T TENSOR REMARK 3 T11: 0.1119 T22: 0.1643 REMARK 3 T33: 0.4660 T12: 0.0283 REMARK 3 T13: 0.0826 T23: -0.0593 REMARK 3 L TENSOR REMARK 3 L11: 1.7159 L22: 0.2485 REMARK 3 L33: 17.6760 L12: 0.6447 REMARK 3 L13: 1.6351 L23: 0.2974 REMARK 3 S TENSOR REMARK 3 S11: 0.2274 S12: 0.5081 S13: -0.0161 REMARK 3 S21: 0.0984 S22: 0.2078 S23: 0.0002 REMARK 3 S31: -0.9204 S32: 0.8283 S33: -0.4352 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. REMARK 4 REMARK 4 3ZZR COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 02-SEP-11. REMARK 100 THE DEPOSITION ID IS D_1290049505. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-DEC-07 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID14-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9340 REMARK 200 MONOCHROMATOR : SILICON (1 1 1) CHANNEL- CUT REMARK 200 OPTICS : TOROIDAL MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 15572 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.450 REMARK 200 RESOLUTION RANGE LOW (A) : 41.810 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 200 DATA REDUNDANCY : 6.800 REMARK 200 R MERGE (I) : 0.07000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 19.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.45 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.53 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.8 REMARK 200 DATA REDUNDANCY IN SHELL : 5.60 REMARK 200 R MERGE FOR SHELL (I) : 0.24000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 6.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: PDB ENTRY 3ZZO REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 38.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.99 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100MM NA-ACETATE PH 4.6, 20 MM CACL2, REMARK 280 30% MPD REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 24.71500 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 39.14500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 24.71500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 39.14500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 CA CA A 201 LIES ON A SPECIAL POSITION. REMARK 375 HOH A2114 LIES ON A SPECIAL POSITION. REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLN A 101 CD OE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 46 NE - CZ - NH1 ANGL. DEV. = 3.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR A 51 156.78 84.23 REMARK 500 ASN A 53 -0.75 72.23 REMARK 500 TRP A 92 -138.53 56.66 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 200 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 25 OE1 REMARK 620 2 GLU A 25 OE2 48.4 REMARK 620 3 ASP A 41 OD2 96.8 87.1 REMARK 620 4 ASP A 41 OD1 81.4 108.3 46.6 REMARK 620 5 GLU A 49 OE1 82.7 126.4 124.3 78.8 REMARK 620 6 GLU A 49 OE2 129.8 175.2 97.6 74.7 49.9 REMARK 620 7 HOH A2003 O 88.8 77.1 153.2 159.6 82.3 98.8 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 201 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 91 OD1 REMARK 620 2 ASP A 91 OD2 49.0 REMARK 620 3 ASP A 91 OD1 119.8 85.4 REMARK 620 4 ASP A 91 OD2 85.9 86.1 48.7 REMARK 620 5 HOH A2110 O 128.4 89.9 77.6 126.3 REMARK 620 6 HOH A2110 O 78.4 127.4 128.5 90.5 131.2 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 200 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MRD A 300 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MPD A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MRD A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MPD A 303 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3ZZO RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE CG11501 PROTEIN REMARK 999 REMARK 999 SEQUENCE REMARK 999 THE CONFLICT S75P BELOW IS CONSIDERED TO BE DUE TO AN ERROR IN REMARK 999 IN THE SEQUENCE DATABASE. DBREF 3ZZR A 25 115 UNP Q9VAK8 Q9VAK8_DROME 25 115 SEQADV 3ZZR PRO A 75 UNP Q9VAK8 SER 75 SEE REMARK 999 SEQADV 3ZZR TRP A 116 UNP Q9VAK8 EXPRESSION TAG SEQADV 3ZZR ARG A 117 UNP Q9VAK8 EXPRESSION TAG SEQADV 3ZZR PRO A 118 UNP Q9VAK8 EXPRESSION TAG SEQADV 3ZZR LEU A 119 UNP Q9VAK8 EXPRESSION TAG SEQRES 1 A 95 GLU CYS CYS THR SER ARG GLU LEU VAL GLU PHE LYS MET SEQRES 2 A 95 ASP ARG GLY ASP CYS GLU ALA VAL ARG ALA ILE GLU ASN SEQRES 3 A 95 TYR PRO ASN GLY CYS GLU VAL THR ILE CYS ALA ASP GLY SEQRES 4 A 95 VAL ALA GLN LEU GLY ALA TYR CYS GLY GLN GLY PRO CYS SEQRES 5 A 95 ASN ILE PHE GLY CYS ASN CYS ASP GLY GLY CYS LEU SER SEQRES 6 A 95 GLY ASP TRP SER GLN GLU PHE VAL ARG ARG ASN GLN GLN SEQRES 7 A 95 TYR GLY ILE GLN ILE ILE LYS VAL THR ARG LEU PRO PHE SEQRES 8 A 95 TRP ARG PRO LEU HET CA A 200 1 HET CA A 201 1 HET MRD A 300 8 HET MPD A 301 8 HET MRD A 302 8 HET MPD A 303 8 HETNAM CA CALCIUM ION HETNAM MRD (4R)-2-METHYLPENTANE-2,4-DIOL HETNAM MPD (4S)-2-METHYL-2,4-PENTANEDIOL FORMUL 2 CA 2(CA 2+) FORMUL 4 MRD 2(C6 H14 O2) FORMUL 5 MPD 2(C6 H14 O2) FORMUL 8 HOH *150(H2 O) HELIX 1 1 ASP A 41 ARG A 46 5 6 HELIX 2 2 ASP A 91 ASN A 100 1 10 HELIX 3 3 GLN A 101 TYR A 103 5 3 SHEET 1 AA 4 ILE A 48 GLU A 49 0 SHEET 2 AA 4 CYS A 55 ILE A 59 -1 O GLU A 56 N ILE A 48 SHEET 3 AA 4 ARG A 30 MET A 37 -1 O GLU A 31 N ILE A 59 SHEET 4 AA 4 ILE A 105 LEU A 113 -1 O GLN A 106 N LYS A 36 SSBOND 1 CYS A 26 CYS A 81 1555 1555 2.06 SSBOND 2 CYS A 27 CYS A 87 1555 1555 2.04 SSBOND 3 CYS A 42 CYS A 55 1555 1555 2.06 SSBOND 4 CYS A 60 CYS A 71 1555 1555 2.04 SSBOND 5 CYS A 76 CYS A 83 1555 1555 2.03 LINK OE1 GLU A 25 CA CA A 200 1555 1555 2.20 LINK OE2 GLU A 25 CA CA A 200 1555 1555 2.94 LINK OD2 ASP A 41 CA CA A 200 3555 1555 2.23 LINK OD1 ASP A 41 CA CA A 200 3555 1555 3.01 LINK OE1 GLU A 49 CA CA A 200 3555 1555 2.80 LINK OE2 GLU A 49 CA CA A 200 3555 1555 2.22 LINK OD1 ASP A 91 CA CA A 201 2565 1555 2.84 LINK OD2 ASP A 91 CA CA A 201 2565 1555 2.26 LINK OD1 ASP A 91 CA CA A 201 1555 1555 2.86 LINK OD2 ASP A 91 CA CA A 201 1555 1555 2.26 LINK CA CA A 200 O HOH A2003 1555 1555 2.43 LINK CA CA A 201 O HOH A2110 1555 2565 2.03 LINK CA CA A 201 O HOH A2110 1555 1555 2.01 CISPEP 1 LEU A 113 PRO A 114 0 -7.28 SITE 1 AC1 4 GLU A 25 ASP A 41 GLU A 49 HOH A2003 SITE 1 AC2 3 ASP A 91 GLN A 94 HOH A2110 SITE 1 AC3 4 ASN A 100 HOH A2082 HOH A2123 HOH A2124 SITE 1 AC4 5 ILE A 48 THR A 58 ILE A 78 HOH A2074 SITE 2 AC4 5 HOH A2139 SITE 1 AC5 9 LEU A 67 TYR A 70 GLY A 72 GLN A 73 SITE 2 AC5 9 LEU A 88 HOH A2077 HOH A2089 HOH A2091 SITE 3 AC5 9 HOH A2142 SITE 1 AC6 3 PRO A 114 PHE A 115 TRP A 116 CRYST1 49.430 78.290 21.720 90.00 90.00 90.00 P 21 21 2 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.020231 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012773 0.000000 0.00000 SCALE3 0.000000 0.000000 0.046041 0.00000